Clone Name	bags37i03
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_463918.1| Oryza sativa (japonica cultivar-group), mRNA	111	3e-21
2	dbj|AK110925.1| Oryza sativa (japonica cultivar-group) cDNA clon...	111	3e-21
3	ref|NM_197111.1| Oryza sativa (japonica cultivar-group) putative...	100	1e-17
4	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	74	6e-10
5	dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic D...	74	6e-10
6	gb|AY928082.1| Zea mays cultivar B73 terpene synthase 3 (TPS3) m...	72	2e-09
7	gb|AY505378.1| Hordeum vulgare subsp. vulgare cultivar Oregon Wo...	68	3e-08
8	gb|AY928081.1| Zea mays cultivar B73 terpene synthase 2 (TPS2) m...	64	5e-07
9	gb|AY505380.1| Hordeum vulgare subsp. vulgare cultivar Golden Pr...	62	2e-06
10	gb|AY505379.1| Hordeum vulgare subsp. vulgare cultivar Oregon Wo...	62	2e-06
11	gb|AY946216.1| Hordeum vulgare subsp. vulgare 3' flanking sequen...	62	2e-06
12	gb|AC146481.2| Oryza sativa chromosome 10 B1288B10 genomic sequ...	52	0.002
13	gb|AC090120.8| Oryza sativa chromosome 10 BAC OSJNBb0049A16 geno...	52	0.002
14	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	52	0.002
15	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	52	0.002
16	gb|AC151914.19| Medicago truncatula clone mth2-29f16, complete s...	42	1.9
17	ref|NM_001013616.1| Mus musculus tripartite motif protein 6 (Tri...	40	7.7
18	gb|AC146228.2| Pan troglodytes BAC clone RP43-32P14 from 7, comp...	40	7.7
19	gb|AF252827.5| Homo sapiens chromosome 8 clone RP11-166E20 map q...	40	7.7
20	gb|AC154726.2| Mus musculus BAC clone RP24-373I6 from chromosome...	40	7.7
21	ref|XM_921499.2| PREDICTED: Mus musculus similar to Tripartite m...	40	7.7
22	gb|AC123830.5| Mus musculus BAC clone RP24-125B17 from chromosom...	40	7.7
23	dbj|AB069968.1| Oryza sativa (japonica cultivar-group) OsCLC-2 g...	40	7.7
24	emb|CR749529.1| Homo sapiens mRNA; cDNA DKFZp686F08110 (from clo...	40	7.7
25	gb|AC100871.2| Homo sapiens chromosome 8, clone RP11-959I15, com...	40	7.7
26	gb|AC107051.4| Homo sapiens BAC clone RP11-224D4 from 4, complet...	40	7.7
27	gb|AC108038.3| Homo sapiens BAC clone RP11-176N15 from 4, comple...	40	7.7
28	gb|AC103842.2| Homo sapiens chromosome 8, clone RP11-367J23, com...	40	7.7
29	gb|AF453325.2| Bos taurus pancreatic anionic trypsinogen (TRYP8)...	40	7.7
30	gb|AC012103.6| Homo sapiens, clone RP11-44D19, complete sequence	40	7.7
31	dbj|AK049238.1| Mus musculus ES cells cDNA, RIKEN full-length en...	40	7.7
32	dbj|AK033396.1| Mus musculus 16 days embryo lung cDNA, RIKEN ful...	40	7.7
33	gb|BC026912.1| Mus musculus tripartite motif protein 6, mRNA (cD...	40	7.7
34	dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic D...	40	7.7
35	emb|BX641113.1|HSM807013 Homo sapiens mRNA; cDNA DKFZp686E06120 ...	40	7.7
36	gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome	40	7.7
37	gb|AC153814.4| Mus musculus chromosome 17, clone RP23-323F20, co...	40	7.7
38	emb|AL356364.18| Human DNA sequence from clone RP11-328I22 on ch...	40	7.7
39	gb|AY871214.1| Oikopleura dioica Hox1 (Hox1) gene, partial cds	40	7.7
40	emb|CT030254.7| Mouse DNA sequence from clone RP24-343E1 on chro...	40	7.7
41	gb|AC124210.3| Homo sapiens chromosome 8 clone RP11-755E24 map q...	40	7.7
42	emb|AL663028.12| Mouse DNA sequence from clone RP23-23J11 on chr...	40	7.7

---

>ref|XM_463918.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2037

 Score =  111 bits (56), Expect = 3e-21
 Identities = 173/212 (81%)
 Strand = Plus / Plus

                                                                        
Query: 161  gcttcaccgaggcaatcaaaatgtgggatcttgcagctgctgcgtcacttccaagctaca 220
            |||||||  ||||||||| ||||||||| |||||||||||||  ||  | || |||| ||
Sbjct: 1131 gcttcactcaggcaatcagaatgtgggaccttgcagctgctgattccttacctagctgca 1190

                                                                        
Query: 221  tgagatcatgctacagtgctctttatacaatcacaaatgacatcgcagatatggctgaaa 280
            |||||||||||| ||| |||||  | ||| | ||||||||||||||||||||||  || |
Sbjct: 1191 tgagatcatgcttcagggctctacacacagttacaaatgacatcgcagatatggtcgaga 1250

                                                                        
Query: 281  gagaacatgggttgaaccctattgatcatctcaaaaaagattggacaatgctttttgatg 340
            ||||||||||  | ||||||||  ||||||| || |||| |||| ||||||| |||||||
Sbjct: 1251 gagaacatggagtaaaccctatcaatcatctgaagaaagcttgggcaatgctgtttgatg 1310

                                            
Query: 341  catttttgcttgaggcgaaatggttgtctgct 372
             |||  ||   ||| | |||||||||||||||
Sbjct: 1311 gattcatgacagagacaaaatggttgtctgct 1342



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                        
Query: 507  catccctccgataatctcctgcccgtcaaagatcttgagactttgggatgacatgggcag 566
            |||||||||  | |||||||||||  |||| ||||||||||| ||||||||| |||||||
Sbjct: 1474 catccctcctgtcatctcctgcccagcaaaaatcttgagactctgggatgacctgggcag 1533

---

>dbj|AK110925.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-D07, full
            insert sequence
          Length = 2037

 Score =  111 bits (56), Expect = 3e-21
 Identities = 173/212 (81%)
 Strand = Plus / Plus

                                                                        
Query: 161  gcttcaccgaggcaatcaaaatgtgggatcttgcagctgctgcgtcacttccaagctaca 220
            |||||||  ||||||||| ||||||||| |||||||||||||  ||  | || |||| ||
Sbjct: 1131 gcttcactcaggcaatcagaatgtgggaccttgcagctgctgattccttacctagctgca 1190

                                                                        
Query: 221  tgagatcatgctacagtgctctttatacaatcacaaatgacatcgcagatatggctgaaa 280
            |||||||||||| ||| |||||  | ||| | ||||||||||||||||||||||  || |
Sbjct: 1191 tgagatcatgcttcagggctctacacacagttacaaatgacatcgcagatatggtcgaga 1250

                                                                        
Query: 281  gagaacatgggttgaaccctattgatcatctcaaaaaagattggacaatgctttttgatg 340
            ||||||||||  | ||||||||  ||||||| || |||| |||| ||||||| |||||||
Sbjct: 1251 gagaacatggagtaaaccctatcaatcatctgaagaaagcttgggcaatgctgtttgatg 1310

                                            
Query: 341  catttttgcttgaggcgaaatggttgtctgct 372
             |||  ||   ||| | |||||||||||||||
Sbjct: 1311 gattcatgacagagacaaaatggttgtctgct 1342



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                        
Query: 507  catccctccgataatctcctgcccgtcaaagatcttgagactttgggatgacatgggcag 566
            |||||||||  | |||||||||||  |||| ||||||||||| ||||||||| |||||||
Sbjct: 1474 catccctcctgtcatctcctgcccagcaaaaatcttgagactctgggatgacctgggcag 1533

---

>ref|NM_197111.1| Oryza sativa (japonica cultivar-group) putative monoterpene
           synthase (OSJNBb0049A16.6), mRNA
          Length = 1407

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 242/306 (79%)
 Strand = Plus / Plus

                                                                       
Query: 61  tccttctccagataccggattgagatcaccaaaatcatcgcaattgtcagtattgtggat 120
           |||||||||||||||||||||||| |||| || |||  | |  |||||   ||| |||||
Sbjct: 643 tccttctccagataccggattgagctcacaaagatcgcctcctttgtctacattatggat 702

                                                                       
Query: 121 gacatctttgatgttattgcaacacaagaggaactttctcgcttcaccgaggcaatcaaa 180
           |||||||||||| || |    ||||||||||| |  ||  |||||||  |||||||||||
Sbjct: 703 gacatctttgatcttgtcagcacacaagaggagcgctcctgcttcacacaggcaatcaaa 762

                                                                       
Query: 181 atgtgggatcttgcagctgctgcgtcacttccaagctacatgagatcatgctacagtgct 240
           ||||||||  ||||||||||||  ||  | || |||| |||||| ||||||||||| |||
Sbjct: 763 atgtgggactttgcagctgctgattccttgcctagctgcatgaggtcatgctacagggct 822

                                                                       
Query: 241 ctttatacaatcacaaatgacatcgcagatatggctgaaagagaacatgggttgaaccct 300
            |||| ||  | |||||||| |||||||||||||  || |||||||| ||  | ||||||
Sbjct: 823 atttacactgttacaaatgatatcgcagatatggtcgagagagaacacggagtaaaccct 882

                                                                       
Query: 301 attgatcatctcaaaaaagattggacaatgctttttgatgcatttttgcttgaggcgaaa 360
           ||  ||||| | || |||| |||| || |||| ||||||| |||  ||  |||||| |||
Sbjct: 883 atcaatcatttgaagaaagcttgggcagtgctgtttgatggattaatgactgaggcaaaa 942

                 
Query: 361 tggttg 366
           ||||||
Sbjct: 943 tggttg 948



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 507  catccctccgataatctcctgcccgtcaaagatcttgagactttgggatgacatgggca 565
            |||||||||  | |||||||||||  |||| ||||| ||||| ||||||||||| ||||
Sbjct: 1074 catccctcctgtcatctcctgcccagcaaaaatcttcagactctgggatgacataggca 1132

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 106/129 (82%)
 Strand = Plus / Plus

                                                                           
Query: 183     gtgggatcttgcagctgctgcgtcacttccaagctacatgagatcatgctacagtgctct 242
               |||||| |||||||||||||  ||  | || |||| |||||||||||||| ||| |||||
Sbjct: 1149572 gtgggaccttgcagctgctgattccttacctagctgcatgagatcatgcttcagggctct 1149631

                                                                           
Query: 243     ttatacaatcacaaatgacatcgcagatatggctgaaagagaacatgggttgaaccctat 302
                 | ||| | ||||||||||||||||||||||  || |||||||||||  | ||||||||
Sbjct: 1149632 acacacagttacaaatgacatcgcagatatggtcgagagagaacatggagtaaaccctat 1149691

                        
Query: 303     tgatcatct 311
                 |||||||
Sbjct: 1149692 caatcatct 1149700



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                           
Query: 507     catccctccgataatctcctgcccgtcaaagatcttgagactttgggatgacatgggcag 566
               |||||||||  | |||||||||||  |||| ||||||||||| ||||||||| |||||||
Sbjct: 1150026 catccctcctgtcatctcctgcccagcaaaaatcttgagactctgggatgacctgggcag 1150085



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 313      aaaaaagattggacaatgcttttt 336
                |||||| |||||||||||||||||
Sbjct: 21176454 aaaaaaaattggacaatgcttttt 21176431

---

>dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1020_C02
          Length = 124578

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 106/129 (82%)
 Strand = Plus / Plus

                                                                          
Query: 183    gtgggatcttgcagctgctgcgtcacttccaagctacatgagatcatgctacagtgctct 242
              |||||| |||||||||||||  ||  | || |||| |||||||||||||| ||| |||||
Sbjct: 102096 gtgggaccttgcagctgctgattccttacctagctgcatgagatcatgcttcagggctct 102155

                                                                          
Query: 243    ttatacaatcacaaatgacatcgcagatatggctgaaagagaacatgggttgaaccctat 302
                | ||| | ||||||||||||||||||||||  || |||||||||||  | ||||||||
Sbjct: 102156 acacacagttacaaatgacatcgcagatatggtcgagagagaacatggagtaaaccctat 102215

                       
Query: 303    tgatcatct 311
                |||||||
Sbjct: 102216 caatcatct 102224



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                          
Query: 507    catccctccgataatctcctgcccgtcaaagatcttgagactttgggatgacatgggcag 566
              |||||||||  | |||||||||||  |||| ||||||||||| ||||||||| |||||||
Sbjct: 102550 catccctcctgtcatctcctgcccagcaaaaatcttgagactctgggatgacctgggcag 102609

---

>gb|AY928082.1| Zea mays cultivar B73 terpene synthase 3 (TPS3) mRNA, complete cds
          Length = 1725

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                        
Query: 162  cttcaccgaggcaatcaaaatgtgggatcttgcagctgctgcgtcacttccaagctacat 221
            ||||||||||||| ||||||||||||||  ||| |||||||  |||||||| || | |||
Sbjct: 1029 cttcaccgaggcagtcaaaatgtgggatactgcggctgctgattcacttcccagttgcat 1088

                        
Query: 222  gagatcatgcta 233
            ||||||||||||
Sbjct: 1089 gagatcatgcta 1100



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                
Query: 515  cgataatctcctgcccgtcaaagatcttgagactttgggatgacatgggcag 566
            |||| |||||||||||  | |||||| | || || |||||||||||||||||
Sbjct: 1388 cgatcatctcctgcccagccaagatcctcaggctctgggatgacatgggcag 1439

---

>gb|AY505378.1| Hordeum vulgare subsp. vulgare cultivar Oregon Wolfe Barley
           Dominant genomic sequence corresponding to Ds insertion
           site in TNP-22
          Length = 381

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                       
Query: 73  taccggattgagatcaccaaaatcatcgcaattgtcagtattgtggatgacatctttgat 132
           ||||||||||||||||| || |||||| |  |||||  ||||||||||||||||||||||
Sbjct: 91  taccggattgagatcacaaagatcatctcgtttgtctatattgtggatgacatctttgat 32

                                     
Query: 133 gttattgcaacacaagaggaactttc 158
            || |||  || |||||||| |||||
Sbjct: 31  cttgttggcacccaagaggagctttc 6

---

>gb|AY928081.1| Zea mays cultivar B73 terpene synthase 2 (TPS2) mRNA, complete cds
          Length = 1746

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                        
Query: 162  cttcaccgaggcaatcaaaatgtgggatcttgcagctgctgcgtcacttccaagctacat 221
            ||||||||||||| ||||||||||||||  ||  |||||||  |||||||| || | |||
Sbjct: 1050 cttcaccgaggcagtcaaaatgtgggatactgtggctgctgattcacttcccagttgcat 1109

                        
Query: 222  gagatcatgcta 233
            ||||||||||||
Sbjct: 1110 gagatcatgcta 1121



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 61  tccttctccagataccggattgagatcaccaa 92
           |||||||||||||||||| | |||||||||||
Sbjct: 949 tccttctccagataccgggtcgagatcaccaa 980

---

>gb|AY505380.1| Hordeum vulgare subsp. vulgare cultivar Golden Promise genomic
           sequence corresponding to Ds insertion site in TNP-22
          Length = 381

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                       
Query: 76  cggattgagatcaccaaaatcatcgcaattgtcagtattgtggatgacatctttgatgtt 135
           |||||||||||||| || |||||| |  |||||  |||||||||||||||||||||| ||
Sbjct: 88  cggattgagatcacaaagatcatctcgtttgtctatattgtggatgacatctttgatctt 29

                                  
Query: 136 attgcaacacaagaggaactttc 158
            |||  || |||||||| |||||
Sbjct: 28  gttggcacccaagaggagctttc 6

---

>gb|AY505379.1| Hordeum vulgare subsp. vulgare cultivar Oregon Wolfe Barley
           Recessive genomic sequence corresponding to Ds insertion
           site in TNP-22
          Length = 381

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                       
Query: 76  cggattgagatcaccaaaatcatcgcaattgtcagtattgtggatgacatctttgatgtt 135
           |||||||||||||| || |||||| |  |||||  |||||||||||||||||||||| ||
Sbjct: 88  cggattgagatcacaaagatcatctcgtttgtctatattgtggatgacatctttgatctt 29

                                  
Query: 136 attgcaacacaagaggaactttc 158
            |||  || |||||||| |||||
Sbjct: 28  gttggcacccaagaggagctttc 6

---

>gb|AY946216.1| Hordeum vulgare subsp. vulgare 3' flanking sequence from Ds
           insertion in TNP-22
          Length = 662

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                       
Query: 76  cggattgagatcaccaaaatcatcgcaattgtcagtattgtggatgacatctttgatgtt 135
           |||||||||||||| || |||||| |  |||||  |||||||||||||||||||||| ||
Sbjct: 227 cggattgagatcacaaagatcatctcgtttgtctatattgtggatgacatctttgatctt 168

                                  
Query: 136 attgcaacacaagaggaactttc 158
            |||  || |||||||| |||||
Sbjct: 167 gttggcacccaagaggagctttc 145

---

>gb|AC146481.2| Oryza sativa chromosome 10  B1288B10 genomic sequence, complete
             sequence
          Length = 58734

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                         
Query: 214   agctacatgagatcatgctacagtgctctttatacaatcacaaatgacatcgcagatatg 273
             |||| |||||| ||||||||||| ||| |||| ||  | |||||||| ||||||||||||
Sbjct: 30808 agctgcatgaggtcatgctacagggctatttacactgttacaaatgatatcgcagatatg 30749

                           
Query: 274   gctgaaagagaaca 287
             |  || ||||||||
Sbjct: 30748 gtcgagagagaaca 30735



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 61    tccttctccagataccggattgagatcac 89
             |||||||||||||||||||||||| ||||
Sbjct: 31089 tccttctccagataccggattgagctcac 31061



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 507   catccctccgataatctcctgcccgtcaaagatcttgagactttgggatgacatgggca 565
             |||||||||  | |||||||||||  |||| ||||| ||||| ||||||||||| ||||
Sbjct: 30276 catccctcctgtcatctcctgcccagcaaaaatcttcagactctgggatgacataggca 30218

---

>gb|AC090120.8| Oryza sativa chromosome 10 BAC OSJNBb0049A16 genomic sequence,
            complete sequence
          Length = 129585

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                        
Query: 214  agctacatgagatcatgctacagtgctctttatacaatcacaaatgacatcgcagatatg 273
            |||| |||||| ||||||||||| ||| |||| ||  | |||||||| ||||||||||||
Sbjct: 2358 agctgcatgaggtcatgctacagggctatttacactgttacaaatgatatcgcagatatg 2417

                          
Query: 274  gctgaaagagaaca 287
            |  || ||||||||
Sbjct: 2418 gtcgagagagaaca 2431



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 61   tccttctccagataccggattgagatcac 89
            |||||||||||||||||||||||| ||||
Sbjct: 2077 tccttctccagataccggattgagctcac 2105



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 507  catccctccgataatctcctgcccgtcaaagatcttgagactttgggatgacatgggca 565
            |||||||||  | |||||||||||  |||| ||||| ||||| ||||||||||| ||||
Sbjct: 2890 catccctcctgtcatctcctgcccagcaaaaatcttcagactctgggatgacataggca 2948

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                            
Query: 214      agctacatgagatcatgctacagtgctctttatacaatcacaaatgacatcgcagatatg 273
                |||| |||||| ||||||||||| ||| |||| ||  | |||||||| ||||||||||||
Sbjct: 18058675 agctgcatgaggtcatgctacagggctatttacactgttacaaatgatatcgcagatatg 18058616

                              
Query: 274      gctgaaagagaaca 287
                |  || ||||||||
Sbjct: 18058615 gtcgagagagaaca 18058602



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 61       tccttctccagataccggattgagatcac 89
                |||||||||||||||||||||||| ||||
Sbjct: 18058956 tccttctccagataccggattgagctcac 18058928



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                           
Query: 507      catccctccgataatctcctgcccgtcaaagatcttgagactttgggatgacatgggca 565
                |||||||||  | |||||||||||  |||| ||||| ||||| ||||||||||| ||||
Sbjct: 18058143 catccctcctgtcatctcctgcccagcaaaaatcttcagactctgggatgacataggca 18058085

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                            
Query: 214      agctacatgagatcatgctacagtgctctttatacaatcacaaatgacatcgcagatatg 273
                |||| |||||| ||||||||||| ||| |||| ||  | |||||||| ||||||||||||
Sbjct: 18067928 agctgcatgaggtcatgctacagggctatttacactgttacaaatgatatcgcagatatg 18067869

                              
Query: 274      gctgaaagagaaca 287
                |  || ||||||||
Sbjct: 18067868 gtcgagagagaaca 18067855



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 61       tccttctccagataccggattgagatcac 89
                |||||||||||||||||||||||| ||||
Sbjct: 18068209 tccttctccagataccggattgagctcac 18068181



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                           
Query: 507      catccctccgataatctcctgcccgtcaaagatcttgagactttgggatgacatgggca 565
                |||||||||  | |||||||||||  |||| ||||| ||||| ||||||||||| ||||
Sbjct: 18067396 catccctcctgtcatctcctgcccagcaaaaatcttcagactctgggatgacataggca 18067338

---

>gb|AC151914.19| Medicago truncatula clone mth2-29f16, complete sequence
          Length = 111276

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 330    gctttttgatgcatttttgct 350
              |||||||||||||||||||||
Sbjct: 107821 gctttttgatgcatttttgct 107801

---

>ref|NM_001013616.1| Mus musculus tripartite motif protein 6 (Trim6), mRNA
          Length = 3808

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 272  tggctgaaagagaacatggg 291
            ||||||||||||||||||||
Sbjct: 1271 tggctgaaagagaacatggg 1252

---

>gb|AC146228.2| Pan troglodytes BAC clone RP43-32P14 from 7, complete sequence
          Length = 221091

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 302    ttgatcatctcaaaaaagat 321
              ||||||||||||||||||||
Sbjct: 173046 ttgatcatctcaaaaaagat 173065

---

>gb|AF252827.5| Homo sapiens chromosome 8 clone RP11-166E20 map q24.13, complete
             sequence
          Length = 165347

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   gctttttgatgcatttttgc 349
             ||||||||||||||||||||
Sbjct: 81634 gctttttgatgcatttttgc 81653

---

>gb|AC154726.2| Mus musculus BAC clone RP24-373I6 from chromosome 13, complete
            sequence
          Length = 173853

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 319  gattggacaatgctttttga 338
            ||||||||||||||||||||
Sbjct: 7829 gattggacaatgctttttga 7848

---

>ref|XM_921499.2| PREDICTED: Mus musculus similar to Tripartite motif protein 6,
            transcript variant 3 (LOC633467), mRNA
          Length = 3922

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 272  tggctgaaagagaacatggg 291
            ||||||||||||||||||||
Sbjct: 1427 tggctgaaagagaacatggg 1408

---

>gb|AC123830.5| Mus musculus BAC clone RP24-125B17 from chromosome 7, complete sequence
          Length = 186045

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 272   tggctgaaagagaacatggg 291
             ||||||||||||||||||||
Sbjct: 37530 tggctgaaagagaacatggg 37549

---

>dbj|AB069968.1| Oryza sativa (japonica cultivar-group) OsCLC-2 gene for chloride
           channel, paritial cds
          Length = 6803

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 313 aaaaaagattggacaatgcttttt 336
           |||||| |||||||||||||||||
Sbjct: 39  aaaaaaaattggacaatgcttttt 62

---

>emb|CR749529.1| Homo sapiens mRNA; cDNA DKFZp686F08110 (from clone DKFZp686F08110)
          Length = 8466

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 302  ttgatcatctcaaaaaagat 321
            ||||||||||||||||||||
Sbjct: 1499 ttgatcatctcaaaaaagat 1518

---

>gb|AC100871.2| Homo sapiens chromosome 8, clone RP11-959I15, complete sequence
          Length = 215314

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 330    gctttttgatgcatttttgc 349
              ||||||||||||||||||||
Sbjct: 136899 gctttttgatgcatttttgc 136880

---

>gb|AC107051.4| Homo sapiens BAC clone RP11-224D4 from 4, complete sequence
          Length = 57025

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 440   ttgtgcatctcttttccatg 459
             ||||||||||||||||||||
Sbjct: 29301 ttgtgcatctcttttccatg 29282

---

>gb|AC108038.3| Homo sapiens BAC clone RP11-176N15 from 4, complete sequence
          Length = 140854

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 112   attgtggatgacatctttgatgtt 135
             ||||||||||||||||||| ||||
Sbjct: 42189 attgtggatgacatctttgctgtt 42212

---

>gb|AC103842.2| Homo sapiens chromosome 8, clone RP11-367J23, complete sequence
          Length = 150506

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 30     catgtttcccatgactatcctcca 53
              |||||||||||||| |||||||||
Sbjct: 133928 catgtttcccatgaatatcctcca 133905

---

>gb|AF453325.2| Bos taurus pancreatic anionic trypsinogen (TRYP8) gene, complete cds;
             germline T-cell receptor beta DJC region genes, partial
             cds
          Length = 151480

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   aaagagaacatgggttgaac 297
             ||||||||||||||||||||
Sbjct: 78001 aaagagaacatgggttgaac 77982

---

>gb|AC012103.6| Homo sapiens, clone RP11-44D19, complete sequence
          Length = 157322

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 30     catgtttcccatgactatcctcca 53
              |||||||||||||| |||||||||
Sbjct: 114343 catgtttcccatgaatatcctcca 114366

---

>dbj|AK049238.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
            clone:C330015M10 product:tripartite motif protein 6, full
            insert sequence
          Length = 3808

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 272  tggctgaaagagaacatggg 291
            ||||||||||||||||||||
Sbjct: 1271 tggctgaaagagaacatggg 1252

---

>dbj|AK033396.1| Mus musculus 16 days embryo lung cDNA, RIKEN full-length enriched
            library, clone:8430429E15 product:tripartite motif
            protein 6, full insert sequence
          Length = 2812

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 272  tggctgaaagagaacatggg 291
            ||||||||||||||||||||
Sbjct: 1271 tggctgaaagagaacatggg 1252

---

>gb|BC026912.1| Mus musculus tripartite motif protein 6, mRNA (cDNA clone
           IMAGE:4009785), complete cds
          Length = 2825

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 272 tggctgaaagagaacatggg 291
           ||||||||||||||||||||
Sbjct: 515 tggctgaaagagaacatggg 496

---

>dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0038F20
          Length = 129595

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 313   aaaaaagattggacaatgcttttt 336
             |||||| |||||||||||||||||
Sbjct: 83170 aaaaaaaattggacaatgcttttt 83147

---

>emb|BX641113.1|HSM807013 Homo sapiens mRNA; cDNA DKFZp686E06120 (from clone DKFZp686E06120)
          Length = 3681

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 302 ttgatcatctcaaaaaagat 321
           ||||||||||||||||||||
Sbjct: 339 ttgatcatctcaaaaaagat 358

---

>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   catctttgatgttattgcaa 142
             ||||||||||||||||||||
Sbjct: 62892 catctttgatgttattgcaa 62911

---

>gb|AC153814.4| Mus musculus chromosome 17, clone RP23-323F20, complete sequence
          Length = 222749

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 319    gattggacaatgctttttga 338
              ||||||||||||||||||||
Sbjct: 187566 gattggacaatgctttttga 187585

---

>emb|AL356364.18| Human DNA sequence from clone RP11-328I22 on chromosome 1 Contains a
            novel gene (LOC388739) and a CpG island, complete
            sequence
          Length = 102634

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 232  tacagtgctctttatacaat 251
            ||||||||||||||||||||
Sbjct: 5859 tacagtgctctttatacaat 5840

---

>gb|AY871214.1| Oikopleura dioica Hox1 (Hox1) gene, partial cds
          Length = 3843

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 535  aagatcttgagactttggga 554
            ||||||||||||||||||||
Sbjct: 3467 aagatcttgagactttggga 3486

---

>emb|CT030254.7| Mouse DNA sequence from clone RP24-343E1 on chromosome 13, complete
             sequence
          Length = 147004

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   gattggacaatgctttttga 338
             ||||||||||||||||||||
Sbjct: 61311 gattggacaatgctttttga 61330

---

>gb|AC124210.3| Homo sapiens chromosome 8 clone RP11-755E24 map q24.13, complete
             sequence
          Length = 138875

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   gctttttgatgcatttttgc 349
             ||||||||||||||||||||
Sbjct: 79544 gctttttgatgcatttttgc 79563

---

>emb|AL663028.12| Mouse DNA sequence from clone RP23-23J11 on chromosome 2, complete
             sequence
          Length = 110275

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 531   gtcaaagatcttgagacttt 550
             ||||||||||||||||||||
Sbjct: 41754 gtcaaagatcttgagacttt 41735


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,945,706
Number of Sequences: 3902068
Number of extensions: 4945706
Number of successful extensions: 86943
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86701
Number of HSP's gapped (non-prelim): 237
length of query: 566
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 543
effective length of database: 17,143,297,704
effective search space: 9308810653272
effective search space used: 9308810653272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---