ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags37h05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_482574.1| Oryza sativa (japonica cultivar-group), mRNA 309 5e-81
2dbj|AK104066.1| Oryza sativa (japonica cultivar-group) cDNA clon... 309 5e-81
3dbj|AK067548.1| Oryza sativa (japonica cultivar-group) cDNA clon... 309 5e-81
4dbj|AK061305.1| Oryza sativa (japonica cultivar-group) cDNA clon... 309 5e-81
5gb|AY105757.1| Zea mays PCO135246 mRNA sequence 194 2e-46
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
7dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
8ref|NM_110980.2| Arabidopsis thaliana PTB (POLYPYRIMIDINE TRACT-... 129 1e-26
9gb|AF076924.1|AF076924 Arabidopsis thaliana polypyrimidine tract... 129 1e-26
10emb|BX825797.1|CNS0A7GJ Arabidopsis thaliana Full-length cDNA Co... 127 4e-26
11gb|DQ252520.1| Solanum tuberosum clone 103F01 polypyrimidine tra... 125 2e-25
12ref|XM_470716.1| Oryza sativa (japonica cultivar-group), mRNA 123 7e-25
13dbj|AK101213.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 7e-25
14dbj|AK062562.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 7e-25
15emb|BX822973.1|CNS0A5VG Arabidopsis thaliana Full-length cDNA Co... 121 3e-24
16gb|DQ222499.1| Solanum tuberosum clone 106A06 polypyrimidine tra... 117 4e-23
17gb|AC148485.10| Medicago truncatula clone mth2-46j5, complete se... 113 6e-22
18gb|AC122724.36| Medicago truncatula clone mth2-14m14, complete s... 113 6e-22
19gb|AC140033.3| Medicago truncatula clone mth2-24f11, complete se... 109 1e-20
20gb|AC140025.7| Medicago truncatula clone mth2-11i16, complete se... 109 1e-20
21dbj|AP004962.1| Lotus japonicus genomic DNA, chromosome 1, clone... 109 1e-20
22gb|AC008261.5|ATAC008261 Arabidopsis thaliana chromosome III BAC... 105 2e-19
23emb|BX822327.1|CNS0A60G Arabidopsis thaliana Full-length cDNA Co... 100 1e-17
24gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 82 2e-12
25gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genom... 82 2e-12
26dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
27gb|AY093218.1| Arabidopsis thaliana putative polypyrimidine trac... 66 1e-07
28gb|BT001239.1| Arabidopsis thaliana putative polypyrimidine trac... 66 1e-07
29ref|NM_124697.3| Arabidopsis thaliana RNA binding / nucleic acid... 48 0.032
30gb|BT020199.1| Arabidopsis thaliana At5g53180 mRNA, complete cds 48 0.032
31gb|BT015760.1| Arabidopsis thaliana At5g53180 mRNA, complete cds 48 0.032
32emb|BX831906.1|CNS0A1L9 Arabidopsis thaliana Full-length cDNA Co... 48 0.032
33emb|BX831305.1|CNS0A0Q2 Arabidopsis thaliana Full-length cDNA Co... 48 0.032
34emb|BX831214.1|CNS0A0PY Arabidopsis thaliana Full-length cDNA Co... 48 0.032
35dbj|AB025622.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 48 0.032
36dbj|AP003472.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 44 0.50
37dbj|AP000424.3| Homo sapiens genomic DNA, chromosome 8q23, clone... 44 0.50
38gb|AC069503.25| Homo sapiens 12 BAC RP11-87C12 (Roswell Park Can... 42 2.0
39emb|AL731549.11| Human DNA sequence from clone RP11-113I9 on chr... 42 2.0
40emb|AL157814.14| Human DNA sequence from clone RP11-285E18 on ch... 42 2.0
41gb|AC110795.4| Homo sapiens BAC clone RP11-628A4 from 4, complet... 42 2.0
42gb|AC154656.2| Mus musculus BAC clone RP24-268M5 from chromosome... 42 2.0
43gb|AC079250.7| Homo sapiens BAC clone RP11-62I18 from 2, complet... 42 2.0
44emb|AL935195.14| Zebrafish DNA sequence from clone CH211-277C7 i... 42 2.0
45dbj|AP002992.4| Homo sapiens genomic DNA, chromosome 11 clone:CT... 42 2.0
46dbj|AP002813.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.0
47gb|BC053509.1| Homo sapiens 5,10-methylenetetrahydrofolate reduc... 40 7.8
48ref|NM_005957.3| Homo sapiens 5,10-methylenetetrahydrofolate red... 40 7.8
49gb|BC018766.1| Homo sapiens 5,10-methylenetetrahydrofolate reduc... 40 7.8
50gb|BC011614.2| Homo sapiens 5,10-methylenetetrahydrofolate reduc... 40 7.8
51gb|AF398933.1| Homo sapiens methylenetetrahydrofolate reductase ... 40 7.8
52emb|Z96074.4|HS399M14 Human DNA sequence from clone RP3-399M14 o... 40 7.8
53emb|AL953897.6| Human DNA sequence from clone RP11-56N19 on chro... 40 7.8
54emb|AL365190.16| Human DNA sequence from clone RP11-512H14 on ch... 40 7.8
55gb|AC087354.13| Homo sapiens chromosome 8, clone RP11-398H6, com... 40 7.8
56emb|AL035668.15|HS859D4 Human DNA sequence from clone RP5-859D4 ... 40 7.8
57gb|AC109583.2| Homo sapiens chromosome 3 clone RP11-427P5, compl... 40 7.8
58gb|AC005499.3| Arabidopsis thaliana chromosome 2 clone T6A23 map... 40 7.8
59gb|AC022716.13| Homo sapiens chromosome 8, clone RP11-135I5, com... 40 7.8
60gb|AC105748.2| Homo sapiens chromosome 3 clone RP11-532I6, compl... 40 7.8
61gb|AC007923.7| Homo sapiens chromosome 17, clone RP11-805L22, co... 40 7.8
62gb|AC084209.6| Homo sapiens BAC clone RP11-462C24 from 4, comple... 40 7.8
63gb|AC021242.10| Homo sapiens chromosome 8, clone RP11-375N15, co... 40 7.8
64gb|AC106821.2| Homo sapiens chromosome 5 clone RP11-730N24, comp... 40 7.8
65gb|AC158545.2| Mus musculus 10 BAC RP24-401G4 (Roswell Park Canc... 40 7.8
66gb|AC053480.5|AC053480 Homo sapiens chromosome 8, clone RP11-526... 40 7.8
67gb|AF260233.1|AF260233 Homo sapiens methylenetetrahydrofolate re... 40 7.8
68gb|AC084451.1|AC084451 Caenorhabditis briggsae cosmid CB023N02, ... 40 7.8
69gb|AC079905.28| Homo sapiens 12 BAC RP11-813P10 (Roswell Park Ca... 40 7.8
70gb|AC007340.8| Homo sapiens chromosome 16 clone RP11-358O5, comp... 40 7.8
71gb|AF040249.1|AF040249 Homo sapiens bone morphogenetic protein 2... 40 7.8
72dbj|AB209113.1| Homo sapiens mRNA for 5,10-methylenetetrahydrofo... 40 7.8
73gb|AC131263.6| Homo sapiens chromosome 11, clone RP11-348A11, co... 40 7.8 
>ref|XM_482574.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1814

 Score =  309 bits (156), Expect = 5e-81
 Identities = 237/264 (89%)
 Strand = Plus / Plus

                                                                        
Query: 24   gaacatgcagtatgctgttggtgtggatgttctacacactgtgttctcttcttttggtgc 83
            ||||||||||||||||||    |||||||||||||| |||||||||||| |||||||| |
Sbjct: 941  gaacatgcagtatgctgtgacggtggatgttctacatactgtgttctctgcttttggtac 1000

                                                                        
Query: 84   tgtccaaaagattgcaatgttcgagaagaatggtggaatgcaggctctgattcagtatcc 143
            ||| ||||||||||||||||| |||||||||||||||||||||||  | ||||| |||||
Sbjct: 1001 tgttcaaaagattgcaatgtttgagaagaatggtggaatgcaggccttaattcaatatcc 1060

                                                                        
Query: 144  agatataacaacagcaggagttgctaaacaagctctggagggacattgcatatatgatgg 203
            ||| || ||||| |||| |||||||||||||||| |||| || || ||||||||||||||
Sbjct: 1061 agacatcacaacggcagcagttgctaaacaagctttggaagggcactgcatatatgatgg 1120

                                                                        
Query: 204  tggttactgtaagcttcatctgtcatactctcgtcatactgatctgaatgtgaaggcaca 263
             |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 1121 aggttactgtaagcttcatctgtcatactctcgtcatactgatctcaatgtaaaggcaca 1180

                                    
Query: 264  tgacgagaggagcagggactacac 287
            ||| ||||| ||||| ||||||||
Sbjct: 1181 tgatgagagaagcagagactacac 1204



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 386  ctgtcggacaagtgccaacctggaatcctaacatgcag 423
            |||| |||||||||||| | |||||||| |||||||||
Sbjct: 1333 ctgttggacaagtgccagcttggaatccaaacatgcag 1370
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>dbj|AK104066.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-C05, full
           insert sequence
          Length = 1209

 Score =  309 bits (156), Expect = 5e-81
 Identities = 237/264 (89%)
 Strand = Plus / Plus

                                                                       
Query: 24  gaacatgcagtatgctgttggtgtggatgttctacacactgtgttctcttcttttggtgc 83
           ||||||||||||||||||    |||||||||||||| |||||||||||| |||||||| |
Sbjct: 349 gaacatgcagtatgctgtgacggtggatgttctacatactgtgttctctgcttttggtac 408

                                                                       
Query: 84  tgtccaaaagattgcaatgttcgagaagaatggtggaatgcaggctctgattcagtatcc 143
           ||| ||||||||||||||||| |||||||||||||||||||||||  | ||||| |||||
Sbjct: 409 tgttcaaaagattgcaatgtttgagaagaatggtggaatgcaggccttaattcaatatcc 468

                                                                       
Query: 144 agatataacaacagcaggagttgctaaacaagctctggagggacattgcatatatgatgg 203
           ||| || ||||| |||| |||||||||||||||| |||| || || ||||||||||||||
Sbjct: 469 agacatcacaacggcagcagttgctaaacaagctttggaagggcactgcatatatgatgg 528

                                                                       
Query: 204 tggttactgtaagcttcatctgtcatactctcgtcatactgatctgaatgtgaaggcaca 263
            |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 529 aggttactgtaagcttcatctgtcatactctcgtcatactgatctcaatgtaaaggcaca 588

                                   
Query: 264 tgacgagaggagcagggactacac 287
           ||| ||||| ||||| ||||||||
Sbjct: 589 tgatgagagaagcagagactacac 612



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 386 ctgtcggacaagtgccaacctggaatcctaacatgcag 423
           |||| |||||||||||| | |||||||| |||||||||
Sbjct: 741 ctgttggacaagtgccagcttggaatccaaacatgcag 778
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>dbj|AK067548.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107I22, full
            insert sequence
          Length = 1814

 Score =  309 bits (156), Expect = 5e-81
 Identities = 237/264 (89%)
 Strand = Plus / Plus

                                                                        
Query: 24   gaacatgcagtatgctgttggtgtggatgttctacacactgtgttctcttcttttggtgc 83
            ||||||||||||||||||    |||||||||||||| |||||||||||| |||||||| |
Sbjct: 941  gaacatgcagtatgctgtgacggtggatgttctacatactgtgttctctgcttttggtac 1000

                                                                        
Query: 84   tgtccaaaagattgcaatgttcgagaagaatggtggaatgcaggctctgattcagtatcc 143
            ||| ||||||||||||||||| |||||||||||||||||||||||  | ||||| |||||
Sbjct: 1001 tgttcaaaagattgcaatgtttgagaagaatggtggaatgcaggccttaattcaatatcc 1060

                                                                        
Query: 144  agatataacaacagcaggagttgctaaacaagctctggagggacattgcatatatgatgg 203
            ||| || ||||| |||| |||||||||||||||| |||| || || ||||||||||||||
Sbjct: 1061 agacatcacaacggcagcagttgctaaacaagctttggaagggcactgcatatatgatgg 1120

                                                                        
Query: 204  tggttactgtaagcttcatctgtcatactctcgtcatactgatctgaatgtgaaggcaca 263
             |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 1121 aggttactgtaagcttcatctgtcatactctcgtcatactgatctcaatgtaaaggcaca 1180

                                    
Query: 264  tgacgagaggagcagggactacac 287
            ||| ||||| ||||| ||||||||
Sbjct: 1181 tgatgagagaagcagagactacac 1204



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 386  ctgtcggacaagtgccaacctggaatcctaacatgcag 423
            |||| |||||||||||| | |||||||| |||||||||
Sbjct: 1333 ctgttggacaagtgccagcttggaatccaaacatgcag 1370
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>dbj|AK061305.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H05, full
           insert sequence
          Length = 1216

 Score =  309 bits (156), Expect = 5e-81
 Identities = 237/264 (89%)
 Strand = Plus / Plus

                                                                       
Query: 24  gaacatgcagtatgctgttggtgtggatgttctacacactgtgttctcttcttttggtgc 83
           ||||||||||||||||||    |||||||||||||| |||||||||||| |||||||| |
Sbjct: 349 gaacatgcagtatgctgtgacggtggatgttctacatactgtgttctctgcttttggtac 408

                                                                       
Query: 84  tgtccaaaagattgcaatgttcgagaagaatggtggaatgcaggctctgattcagtatcc 143
           ||| ||||||||||||||||| |||||||||||||||||||||||  | ||||| |||||
Sbjct: 409 tgttcaaaagattgcaatgtttgagaagaatggtggaatgcaggccttaattcaatatcc 468

                                                                       
Query: 144 agatataacaacagcaggagttgctaaacaagctctggagggacattgcatatatgatgg 203
           ||| || ||||| |||| |||||||||||||||| |||| || || ||||||||||||||
Sbjct: 469 agacatcacaacggcagcagttgctaaacaagctttggaagggcactgcatatatgatgg 528

                                                                       
Query: 204 tggttactgtaagcttcatctgtcatactctcgtcatactgatctgaatgtgaaggcaca 263
            |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 529 aggttactgtaagcttcatctgtcatactctcgtcatactgatctcaatgtaaaggcaca 588

                                   
Query: 264 tgacgagaggagcagggactacac 287
           ||| ||||| ||||| ||||||||
Sbjct: 589 tgatgagagaagcagagactacac 612



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 386 ctgtcggacaagtgccaacctggaatcctaacatgcag 423
           |||| |||||||||||| | |||||||| |||||||||
Sbjct: 741 ctgttggacaagtgccagcttggaatccaaacatgcag 778
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>gb|AY105757.1| Zea mays PCO135246 mRNA sequence
          Length = 925

 Score =  194 bits (98), Expect = 2e-46
 Identities = 131/142 (92%)
 Strand = Plus / Plus

                                                                       
Query: 146 atataacaacagcaggagttgctaaacaagctctggagggacattgcatatatgatggtg 205
           ||||||| || ||||  ||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 138 atataactaccgcagccgttgctaaacaagctttggagggacactgcatatatgatggtg 197

                                                                       
Query: 206 gttactgtaagcttcatctgtcatactctcgtcatactgatctgaatgtgaaggcacatg 265
           ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 198 gttactgtaagcttcatctgtcatactctcgtcatactgatctcaatgtaaaggcacatg 257

                                 
Query: 266 acgagaggagcagggactacac 287
           | ||||| ||||| ||||||||
Sbjct: 258 atgagagaagcagagactacac 279



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                       
Query: 82  gctgtccaaaagattgcaatgttcgagaagaatggtggaatgcaggctctgattcagtat 141
           ||||| ||||| ||||||||||| |||||||||||||||||||||||||| || || |||
Sbjct: 4   gctgttcaaaaaattgcaatgtttgagaagaatggtggaatgcaggctctaatccaatat 63

                
Query: 142 ccaga 146
           |||||
Sbjct: 64  ccaga 68
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  145 bits (73), Expect = 2e-31
 Identities = 100/109 (91%)
 Strand = Plus / Minus

                                                                            
Query: 151      acaacagcaggagttgctaaacaagctctggagggacattgcatatatgatggtggttac 210
                ||||| |||| |||||||||||||||| |||| || || |||||||||||||| ||||||
Sbjct: 21167246 acaacggcagcagttgctaaacaagctttggaagggcactgcatatatgatggaggttac 21167187

                                                                 
Query: 211      tgtaagcttcatctgtcatactctcgtcatactgatctgaatgtgaagg 259
                |||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 21167186 tgtaagcttcatctgtcatactctcgtcatactgatctcaatgtaaagg 21167138



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 74/82 (90%)
 Strand = Plus / Minus

                                                                            
Query: 64       gtgttctcttcttttggtgctgtccaaaagattgcaatgttcgagaagaatggtggaatg 123
                ||||||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 21168208 gtgttctctgcttttggtactgttcaaaagattgcaatgtttgagaagaatggtggaatg 21168149

                                      
Query: 124      caggctctgattcagtatccag 145
                |||||  | ||||| |||||||
Sbjct: 21168148 caggccttaattcaatatccag 21168127



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 24       gaacatgcagtatgctgttggtgtggatgttctacacactgt 65
                ||||||||||||||||||    |||||||||||||| |||||
Sbjct: 21168337 gaacatgcagtatgctgtgacggtggatgttctacatactgt 21168296



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 386      ctgtcggacaagtgccaacctggaatcctaacatgcag 423
                |||| |||||||||||| | |||||||| |||||||||
Sbjct: 21166735 ctgttggacaagtgccagcttggaatccaaacatgcag 21166698
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>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0413H11
          Length = 147655

 Score =  145 bits (73), Expect = 2e-31
 Identities = 100/109 (91%)
 Strand = Plus / Minus

                                                                          
Query: 151    acaacagcaggagttgctaaacaagctctggagggacattgcatatatgatggtggttac 210
              ||||| |||| |||||||||||||||| |||| || || |||||||||||||| ||||||
Sbjct: 138456 acaacggcagcagttgctaaacaagctttggaagggcactgcatatatgatggaggttac 138397

                                                               
Query: 211    tgtaagcttcatctgtcatactctcgtcatactgatctgaatgtgaagg 259
              |||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 138396 tgtaagcttcatctgtcatactctcgtcatactgatctcaatgtaaagg 138348



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 74/82 (90%)
 Strand = Plus / Minus

                                                                          
Query: 64     gtgttctcttcttttggtgctgtccaaaagattgcaatgttcgagaagaatggtggaatg 123
              ||||||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 139418 gtgttctctgcttttggtactgttcaaaagattgcaatgtttgagaagaatggtggaatg 139359

                                    
Query: 124    caggctctgattcagtatccag 145
              |||||  | ||||| |||||||
Sbjct: 139358 caggccttaattcaatatccag 139337



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                        
Query: 24     gaacatgcagtatgctgttggtgtggatgttctacacactgt 65
              ||||||||||||||||||    |||||||||||||| |||||
Sbjct: 139547 gaacatgcagtatgctgtgacggtggatgttctacatactgt 139506



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 386    ctgtcggacaagtgccaacctggaatcctaacatgcag 423
              |||| |||||||||||| | |||||||| |||||||||
Sbjct: 137945 ctgttggacaagtgccagcttggaatccaaacatgcag 137908
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>ref|NM_110980.2| Arabidopsis thaliana PTB (POLYPYRIMIDINE TRACT-BINDING); RNA binding
            / nucleic acid binding AT3G01150 (PTB) mRNA, complete cds
          Length = 1457

 Score =  129 bits (65), Expect = 1e-26
 Identities = 191/233 (81%)
 Strand = Plus / Plus

                                                                        
Query: 28   atgcagtatgctgttggtgtggatgttctacacactgtgttctcttcttttggtgctgtc 87
            ||||||||||||||   |||||||||||| ||||| ||||| ||| | | |||  |||||
Sbjct: 849  atgcagtatgctgtcactgtggatgttcttcacacggtgttttctgcatatggaactgtc 908

                                                                        
Query: 88   caaaagattgcaatgttcgagaagaatggtggaatgcaggctctgattcagtatccagat 147
            || |||||||| || || ||||||||||||  || ||| ||  | ||||| ||  | |||
Sbjct: 909  cagaagattgctatatttgagaagaatggttcaacgcaagcattaattcaatactctgat 968

                                                                        
Query: 148  ataacaacagcaggagttgctaaacaagctctggagggacattgcatatatgatggtggt 207
            ||| ||||||||| | | || ||| |||| ||||| ||||| ||||| ||||| ||||| 
Sbjct: 969  ataccaacagcagcaatggccaaagaagcactggaaggacactgcatttatgacggtggc 1028

                                                                 
Query: 208  tactgtaagcttcatctgtcatactctcgtcatactgatctgaatgtgaaggc 260
            |||||||||||||  || ||||||||||||||||||||||||||||| |||||
Sbjct: 1029 tactgtaagcttcgactatcatactctcgtcatactgatctgaatgttaaggc 1081
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>gb|AF076924.1|AF076924 Arabidopsis thaliana polypyrimidine tract-binding protein homolog
            (PTB) mRNA, complete cds
          Length = 1425

 Score =  129 bits (65), Expect = 1e-26
 Identities = 191/233 (81%)
 Strand = Plus / Plus

                                                                        
Query: 28   atgcagtatgctgttggtgtggatgttctacacactgtgttctcttcttttggtgctgtc 87
            ||||||||||||||   |||||||||||| ||||| ||||| ||| | | |||  |||||
Sbjct: 805  atgcagtatgctgtcactgtggatgttcttcacacggtgttttctgcatatggaactgtc 864

                                                                        
Query: 88   caaaagattgcaatgttcgagaagaatggtggaatgcaggctctgattcagtatccagat 147
            || |||||||| || || ||||||||||||  || ||| ||  | ||||| ||  | |||
Sbjct: 865  cagaagattgctatatttgagaagaatggttcaacgcaagcattaattcaatactctgat 924

                                                                        
Query: 148  ataacaacagcaggagttgctaaacaagctctggagggacattgcatatatgatggtggt 207
            ||| ||||||||| | | || ||| |||| ||||| ||||| ||||| ||||| ||||| 
Sbjct: 925  ataccaacagcagcaatggccaaagaagcactggaaggacactgcatttatgacggtggc 984

                                                                 
Query: 208  tactgtaagcttcatctgtcatactctcgtcatactgatctgaatgtgaaggc 260
            |||||||||||||  || ||||||||||||||||||||||||||||| |||||
Sbjct: 985  tactgtaagcttcgactatcatactctcgtcatactgatctgaatgttaaggc 1037
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>emb|BX825797.1|CNS0A7GJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL62ZH11 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 1433

 Score =  127 bits (64), Expect = 4e-26
 Identities = 190/232 (81%)
 Strand = Plus / Plus

                                                                        
Query: 28   atgcagtatgctgttggtgtggatgttctacacactgtgttctcttcttttggtgctgtc 87
            ||||||||||||||   |||||||||||| ||||| ||||| ||| | | |||  |||||
Sbjct: 832  atgcagtatgctgtcactgtggatgttcttcacacggtgttttctgcatatggaactgtc 891

                                                                        
Query: 88   caaaagattgcaatgttcgagaagaatggtggaatgcaggctctgattcagtatccagat 147
            || |||||||| || || ||||||||||||  || ||| ||  | ||||| ||  | |||
Sbjct: 892  cagaagattgctatatttgagaagaatggttcaacgcaagcattaattcaatactctgat 951

                                                                        
Query: 148  ataacaacagcaggagttgctaaacaagctctggagggacattgcatatatgatggtggt 207
            ||| ||||||||| | | || ||| |||| ||||| ||||| ||||| ||||| ||||| 
Sbjct: 952  ataccaacagcagcaatggccaaagaagcactggaaggacactgcatttatgacggtggc 1011

                                                                
Query: 208  tactgtaagcttcatctgtcatactctcgtcatactgatctgaatgtgaagg 259
            |||||||||||||  || ||||||||||||||||||||||||||||| ||||
Sbjct: 1012 tactgtaagcttcgactatcatactctcgtcatactgatctgaatgttaagg 1063
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>gb|DQ252520.1| Solanum tuberosum clone 103F01 polypyrimidine tract-binding
            protein-like mRNA, complete cds
          Length = 1721

 Score =  125 bits (63), Expect = 2e-25
 Identities = 186/227 (81%)
 Strand = Plus / Plus

                                                                        
Query: 28   atgcagtatgctgttggtgtggatgttctacacactgtgttctcttcttttggtgctgtc 87
            |||||||||||||||   || ||||| ||  |||| || |||||| | |||||| |||| 
Sbjct: 796  atgcagtatgctgttaccgtcgatgtccttaacacggttttctctgcatttggtactgtt 855

                                                                        
Query: 88   caaaagattgcaatgttcgagaagaatggtggaatgcaggctctgattcagtatccagat 147
            || |||||||| || || ||||||||||||  ||  |||||  | ||||||||||| |||
Sbjct: 856  cagaagattgctatatttgagaagaatggtcaaacccaggcattaattcagtatcctgat 915

                                                                        
Query: 148  ataacaacagcaggagttgctaaacaagctctggagggacattgcatatatgatggtggt 207
             ||||||  ||||  | ||| ||  | ||| | |||||||| ||||||||||||||||| 
Sbjct: 916  gtaacaattgcagctgctgcaaaggacgctttagagggacactgcatatatgatggtggc 975

                                                           
Query: 208  tactgtaagcttcatctgtcatactctcgtcatactgatctgaatgt 254
            || |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 976  tattgtaagcttcatctatcatactctcgtcatactgatctgaatgt 1022
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>ref|XM_470716.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1541

 Score =  123 bits (62), Expect = 7e-25
 Identities = 179/218 (82%)
 Strand = Plus / Plus

                                                                       
Query: 46  gtggatgttctacacactgtgttctcttcttttggtgctgtccaaaagattgcaatgttc 105
           ||||||||||| || |||||||||||| | |||||| | ||||| || || || || || 
Sbjct: 781 gtggatgttctccatactgtgttctctgcatttggtacagtccagaaaatagctattttt 840

                                                                       
Query: 106 gagaagaatggtggaatgcaggctctgattcagtatccagatataacaacagcaggagtt 165
           |||||||| |||||||  || ||| |||||||||| || ||| |||| |||||   ||||
Sbjct: 841 gagaagaacggtggaacacaagctttgattcagtaccctgatgtaactacagcttcagtt 900

                                                                       
Query: 166 gctaaacaagctctggagggacattgcatatatgatggtggttactgtaagcttcatctg 225
           || ||  ||||  |||| || |||||||| || |||||||| ||||||||||| || |||
Sbjct: 901 gcgaaggaagcattggaagggcattgcatctacgatggtggctactgtaagctccacctg 960

                                                 
Query: 226 tcatactctcgtcatactgatctgaatgtgaaggcaca 263
           ||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 961 tcatattctcgtcatactgatctcaatgtaaaggcaca 998
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>dbj|AK101213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031B03, full
            insert sequence
          Length = 1748

 Score =  123 bits (62), Expect = 7e-25
 Identities = 179/218 (82%)
 Strand = Plus / Plus

                                                                        
Query: 46   gtggatgttctacacactgtgttctcttcttttggtgctgtccaaaagattgcaatgttc 105
            ||||||||||| || |||||||||||| | |||||| | ||||| || || || || || 
Sbjct: 956  gtggatgttctccatactgtgttctctgcatttggtacagtccagaaaatagctattttt 1015

                                                                        
Query: 106  gagaagaatggtggaatgcaggctctgattcagtatccagatataacaacagcaggagtt 165
            |||||||| |||||||  || ||| |||||||||| || ||| |||| |||||   ||||
Sbjct: 1016 gagaagaacggtggaacacaagctttgattcagtaccctgatgtaactacagcttcagtt 1075

                                                                        
Query: 166  gctaaacaagctctggagggacattgcatatatgatggtggttactgtaagcttcatctg 225
            || ||  ||||  |||| || |||||||| || |||||||| ||||||||||| || |||
Sbjct: 1076 gcgaaggaagcattggaagggcattgcatctacgatggtggctactgtaagctccacctg 1135

                                                  
Query: 226  tcatactctcgtcatactgatctgaatgtgaaggcaca 263
            ||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 1136 tcatattctcgtcatactgatctcaatgtaaaggcaca 1173
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>dbj|AK062562.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-E01, full
            insert sequence
          Length = 1672

 Score =  123 bits (62), Expect = 7e-25
 Identities = 179/218 (82%)
 Strand = Plus / Plus

                                                                        
Query: 46   gtggatgttctacacactgtgttctcttcttttggtgctgtccaaaagattgcaatgttc 105
            ||||||||||| || |||||||||||| | |||||| | ||||| || || || || || 
Sbjct: 911  gtggatgttctccatactgtgttctctgcatttggtacagtccagaaaatagctattttt 970

                                                                        
Query: 106  gagaagaatggtggaatgcaggctctgattcagtatccagatataacaacagcaggagtt 165
            |||||||| |||||||  || ||| |||||||||| || ||| |||| |||||   ||||
Sbjct: 971  gagaagaacggtggaacacaagctttgattcagtaccctgatgtaactacagcttcagtt 1030

                                                                        
Query: 166  gctaaacaagctctggagggacattgcatatatgatggtggttactgtaagcttcatctg 225
            || ||  ||||  |||| || |||||||| || |||||||| ||||||||||| || |||
Sbjct: 1031 gcgaaggaagcattggaagggcattgcatctacgatggtggctactgtaagctccacctg 1090

                                                  
Query: 226  tcatactctcgtcatactgatctgaatgtgaaggcaca 263
            ||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 1091 tcatattctcgtcatactgatctcaatgtaaaggcaca 1128
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>emb|BX822973.1|CNS0A5VG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB78ZB08 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1475

 Score =  121 bits (61), Expect = 3e-24
 Identities = 190/233 (81%)
 Strand = Plus / Plus

                                                                        
Query: 28   atgcagtatgctgttggtgtggatgttctacacactgtgttctcttcttttggtgctgtc 87
            ||||||||||||||   |||||||||||| ||||| ||||| ||| | | |||  |||||
Sbjct: 907  atgcagtatgctgtcactgtggatgttcttcacacggtgttttctgcatatggaactgtc 966

                                                                        
Query: 88   caaaagattgcaatgttcgagaagaatggtggaatgcaggctctgattcagtatccagat 147
            || |||||||| || || ||||||||||||  || ||| ||  | ||||| ||  | |||
Sbjct: 967  cagaagattgctatatttgagaagaatggttcaacgcaagcattaattcaatactctgat 1026

                                                                        
Query: 148  ataacaacagcaggagttgctaaacaagctctggagggacattgcatatatgatggtggt 207
            ||| ||||||||| | | || ||| |||  ||||| ||||| ||||| ||||| ||||| 
Sbjct: 1027 ataccaacagcagcaatggccaaagaagtactggaaggacactgcatttatgacggtggc 1086

                                                                 
Query: 208  tactgtaagcttcatctgtcatactctcgtcatactgatctgaatgtgaaggc 260
            |||||||||||||  || ||||||||||||||||||||||||||||| |||||
Sbjct: 1087 tactgtaagcttcgactatcatactctcgtcatactgatctgaatgttaaggc 1139
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>gb|DQ222499.1| Solanum tuberosum clone 106A06 polypyrimidine tract-binding-like
            mRNA, complete cds
          Length = 1710

 Score =  117 bits (59), Expect = 4e-23
 Identities = 185/227 (81%)
 Strand = Plus / Plus

                                                                        
Query: 28   atgcagtatgctgttggtgtggatgttctacacactgtgttctcttcttttggtgctgtc 87
            |||||||||||||||   || ||||| ||  |||| || |||||| | |||||| |||| 
Sbjct: 805  atgcagtatgctgttaccgtcgatgtccttaacacggttttctctgcatttggtactgtt 864

                                                                        
Query: 88   caaaagattgcaatgttcgagaagaatggtggaatgcaggctctgattcagtatccagat 147
            || ||||| || || || ||||||||||||  ||  |||||  | ||||||||||| |||
Sbjct: 865  cagaagatcgctatatttgagaagaatggtcaaacccaggcattaattcagtatcctgat 924

                                                                        
Query: 148  ataacaacagcaggagttgctaaacaagctctggagggacattgcatatatgatggtggt 207
             ||||||  ||||  | ||| ||  | ||| | |||||||| ||||||||||||||||| 
Sbjct: 925  gtaacaattgcagctgctgcaaaggacgctttagagggacactgcatatatgatggtggc 984

                                                           
Query: 208  tactgtaagcttcatctgtcatactctcgtcatactgatctgaatgt 254
            || |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 985  tattgtaagcttcatctatcatactctcgtcatactgatctgaatgt 1031
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>gb|AC148485.10| Medicago truncatula clone mth2-46j5, complete sequence
          Length = 111045

 Score =  113 bits (57), Expect = 6e-22
 Identities = 75/81 (92%)
 Strand = Plus / Minus

                                                                         
Query: 179   tggagggacattgcatatatgatggtggttactgtaagcttcatctgtcatactctcgtc 238
             |||||||||||||||||||||||||||| || ||||||||||||||  ||||||||||||
Sbjct: 58067 tggagggacattgcatatatgatggtggctattgtaagcttcatctaacatactctcgtc 58008

                                  
Query: 239   atactgatctgaatgtgaagg 259
             |||||||||| ||||| ||||
Sbjct: 58007 atactgatctcaatgttaagg 57987
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>gb|AC122724.36| Medicago truncatula clone mth2-14m14, complete sequence
          Length = 122740

 Score =  113 bits (57), Expect = 6e-22
 Identities = 75/81 (92%)
 Strand = Plus / Plus

                                                                          
Query: 179    tggagggacattgcatatatgatggtggttactgtaagcttcatctgtcatactctcgtc 238
              |||||||||||||||||||||||||||| || ||||||||||||||  ||||||||||||
Sbjct: 115901 tggagggacattgcatatatgatggtggctattgtaagcttcatctaacatactctcgtc 115960

                                   
Query: 239    atactgatctgaatgtgaagg 259
              |||||||||| ||||| ||||
Sbjct: 115961 atactgatctcaatgttaagg 115981
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>gb|AC140033.3| Medicago truncatula clone mth2-24f11, complete sequence
          Length = 120384

 Score =  109 bits (55), Expect = 1e-20
 Identities = 73/79 (92%)
 Strand = Plus / Plus

                                                                         
Query: 181   gagggacattgcatatatgatggtggttactgtaagcttcatctgtcatactctcgtcat 240
             ||||| |||||||||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 76320 gaggggcattgcatatatgatggtggctattgtaagcttcatctatcatactctcgtcat 76379

                                
Query: 241   actgatctgaatgtgaagg 259
             |||||||| ||||| ||||
Sbjct: 76380 actgatctcaatgtaaagg 76398
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>gb|AC140025.7| Medicago truncatula clone mth2-11i16, complete sequence
          Length = 130592

 Score =  109 bits (55), Expect = 1e-20
 Identities = 73/79 (92%)
 Strand = Plus / Plus

                                                                         
Query: 181   gagggacattgcatatatgatggtggttactgtaagcttcatctgtcatactctcgtcat 240
             ||||| |||||||||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 25773 gaggggcattgcatatatgatggtggctattgtaagcttcatctatcatactctcgtcat 25832

                                
Query: 241   actgatctgaatgtgaagg 259
             |||||||| ||||| ||||
Sbjct: 25833 actgatctcaatgtaaagg 25851
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>dbj|AP004962.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT28H14, TM0141,
             complete sequence
          Length = 100810

 Score =  109 bits (55), Expect = 1e-20
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                         
Query: 181   gagggacattgcatatatgatggtggttactgtaagcttcatctgtcatactctcgtcat 240
             |||||||||||||||||||||||||| || ||||||||||||||  |||| |||||||||
Sbjct: 30433 gagggacattgcatatatgatggtggctattgtaagcttcatctaacatattctcgtcat 30374

                                
Query: 241   actgatctgaatgtgaagg 259
             |||||||| ||||||||||
Sbjct: 30373 actgatctcaatgtgaagg 30355
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>gb|AC008261.5|ATAC008261 Arabidopsis thaliana chromosome III BAC T4P13 genomic sequence,
             complete sequence
          Length = 93735

 Score =  105 bits (53), Expect = 2e-19
 Identities = 104/121 (85%)
 Strand = Plus / Minus

                                                                         
Query: 144   agatataacaacagcaggagttgctaaacaagctctggagggacattgcatatatgatgg 203
             ||||||| ||||||||| | | || ||| |||| ||||| ||||| ||||| ||||| ||
Sbjct: 43321 agatataccaacagcagcaatggccaaagaagcactggaaggacactgcatttatgacgg 43262

                                                                         
Query: 204   tggttactgtaagcttcatctgtcatactctcgtcatactgatctgaatgtgaaggcaca 263
             ||| |||||||||||||  || ||||||||||||||||||||||||||||| |||| |||
Sbjct: 43261 tggctactgtaagcttcgactatcatactctcgtcatactgatctgaatgttaaggtaca 43202

              
Query: 264   t 264
             |
Sbjct: 43201 t 43201
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>emb|BX822327.1|CNS0A60G Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB29ZE06 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1407

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 189/234 (80%), Gaps = 1/234 (0%)
 Strand = Plus / Plus

                                                                        
Query: 28   atgcagtatgctgttggtgtggatgttctacacact-gtgttctcttcttttggtgctgt 86
            ||||||||||||||   |||||||||||| |||||  ||||| ||| | | |||  ||||
Sbjct: 839  atgcagtatgctgtcactgtggatgttcttcacacgcgtgttttctgcatatggcactgt 898

                                                                        
Query: 87   ccaaaagattgcaatgttcgagaagaatggtggaatgcaggctctgattcagtatccaga 146
            ||| |||||||| || || ||||||||||||  || ||| ||  | ||||| ||  | ||
Sbjct: 899  ccagaagattgctatatttgagaagaatggttcaacgcaagcattaattcaatactctga 958

                                                                        
Query: 147  tataacaacagcaggagttgctaaacaagctctggagggacattgcatatatgatggtgg 206
            |||| | ||||||| | | || ||| |||| ||||| ||| | ||||| ||||| |||||
Sbjct: 959  tatacccacagcagcaatggccaaagaagcactggaaggaaactgcatttatgacggtgg 1018

                                                                  
Query: 207  ttactgtaagcttcatctgtcatactctcgtcatactgatctgaatgtgaaggc 260
             |||||||||||||  || ||||||||||||||||||||||||||||| |||||
Sbjct: 1019 ctactgtaagcttcgactatcatactctcgtcatactgatctgaatgttaaggc 1072
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                            
Query: 187      cattgcatatatgatggtggttactgtaagcttcatctgtcatactctcgtcatactgat 246
                |||||||| || |||||||| ||||||||||| || |||||||| |||||||||||||||
Sbjct: 14720957 cattgcatctacgatggtggctactgtaagctccacctgtcatattctcgtcatactgat 14721016

                             
Query: 247      ctgaatgtgaagg 259
                || ||||| ||||
Sbjct: 14721017 ctcaatgtaaagg 14721029
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>gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genomic sequence, complete
             sequence
          Length = 130306

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                         
Query: 187   cattgcatatatgatggtggttactgtaagcttcatctgtcatactctcgtcatactgat 246
             |||||||| || |||||||| ||||||||||| || |||||||| |||||||||||||||
Sbjct: 59869 cattgcatctacgatggtggctactgtaagctccacctgtcatattctcgtcatactgat 59928

                          
Query: 247   ctgaatgtgaagg 259
             || ||||| ||||
Sbjct: 59929 ctcaatgtaaagg 59941
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                            
Query: 187      cattgcatatatgatggtggttactgtaagcttcatctgtcatactctcgtcatactgat 246
                |||||||| || |||||||| ||||||||||| || |||||||| |||||||||||||||
Sbjct: 14715491 cattgcatctacgatggtggctactgtaagctccacctgtcatattctcgtcatactgat 14715550

                             
Query: 247      ctgaatgtgaagg 259
                || ||||| ||||
Sbjct: 14715551 ctcaatgtaaagg 14715563
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>gb|AY093218.1| Arabidopsis thaliana putative polypyrimidine tract-binding protein
            (At3g01150) mRNA, complete cds
          Length = 1513

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 147/185 (79%)
 Strand = Plus / Plus

                                                                        
Query: 28   atgcagtatgctgttggtgtggatgttctacacactgtgttctcttcttttggtgctgtc 87
            ||||||||||||||   |||||||||||| ||||| ||||| ||| | | |||  |||||
Sbjct: 953  atgcagtatgctgtcactgtggatgttcttcacacggtgttttctgcatatggaactgtc 1012

                                                                        
Query: 88   caaaagattgcaatgttcgagaagaatggtggaatgcaggctctgattcagtatccagat 147
            || |||||||| || || ||||||||||||  || ||| ||  | ||||| ||  | |||
Sbjct: 1013 cagaagattgctatatttgagaagaatggttcaacgcaagcattaattcaatactctgat 1072

                                                                        
Query: 148  ataacaacagcaggagttgctaaacaagctctggagggacattgcatatatgatggtggt 207
            ||| ||||||||| | | || ||| |||| ||||| ||||| ||||| ||||| ||||| 
Sbjct: 1073 ataccaacagcagcaatggccaaagaagcactggaaggacactgcatttatgacggtggc 1132

                 
Query: 208  tactg 212
            |||||
Sbjct: 1133 tactg 1137
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>gb|BT001239.1| Arabidopsis thaliana putative polypyrimidine tract-binding protein
           (At3g01150) mRNA, complete cds
          Length = 721

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 147/185 (79%)
 Strand = Plus / Plus

                                                                       
Query: 28  atgcagtatgctgttggtgtggatgttctacacactgtgttctcttcttttggtgctgtc 87
           ||||||||||||||   |||||||||||| ||||| ||||| ||| | | |||  |||||
Sbjct: 379 atgcagtatgctgtcactgtggatgttcttcacacggtgttttctgcatatggaactgtc 438

                                                                       
Query: 88  caaaagattgcaatgttcgagaagaatggtggaatgcaggctctgattcagtatccagat 147
           || |||||||| || || ||||||||||||  || ||| ||  | ||||| ||  | |||
Sbjct: 439 cagaagattgctatatttgagaagaatggttcaacgcaagcattaattcaatactctgat 498

                                                                       
Query: 148 ataacaacagcaggagttgctaaacaagctctggagggacattgcatatatgatggtggt 207
           ||| ||||||||| | | || ||| |||| ||||| ||||| ||||| ||||| ||||| 
Sbjct: 499 ataccaacagcagcaatggccaaagaagcactggaaggacactgcatttatgacggtggc 558

                
Query: 208 tactg 212
           |||||
Sbjct: 559 tactg 563
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>ref|NM_124697.3| Arabidopsis thaliana RNA binding / nucleic acid binding AT5G53180
           mRNA, complete cds
          Length = 1607

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 88  caaaagattgcaatgttcgagaagaatggtgg 119
           ||||||||||||||||| || |||||||||||
Sbjct: 941 caaaagattgcaatgtttgacaagaatggtgg 972
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>gb|BT020199.1| Arabidopsis thaliana At5g53180 mRNA, complete cds
          Length = 1290

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 88  caaaagattgcaatgttcgagaagaatggtgg 119
           ||||||||||||||||| || |||||||||||
Sbjct: 817 caaaagattgcaatgtttgacaagaatggtgg 848



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 179 tggagggacattgcatatatgatggtggttactgtaagct 218
           ||||||||||||| || || ||||||||||  ||||||||
Sbjct: 908 tggagggacattgtatctacgatggtggtttttgtaagct 947
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>gb|BT015760.1| Arabidopsis thaliana At5g53180 mRNA, complete cds
          Length = 1392

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 88  caaaagattgcaatgttcgagaagaatggtgg 119
           ||||||||||||||||| || |||||||||||
Sbjct: 880 caaaagattgcaatgtttgacaagaatggtgg 911



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                    
Query: 179  tggagggacattgcatatatgatggtggttactgtaagct 218
            ||||||||||||| || || ||||||||||  ||||||||
Sbjct: 971  tggagggacattgtatctacgatggtggtttttgtaagct 1010
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>emb|BX831906.1|CNS0A1L9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH38ZG02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1489

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 88  caaaagattgcaatgttcgagaagaatggtgg 119
           ||||||||||||||||| || |||||||||||
Sbjct: 881 caaaagattgcaatgtttgacaagaatggtgg 912
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>emb|BX831305.1|CNS0A0Q2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS77ZE08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1543

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 88  caaaagattgcaatgttcgagaagaatggtgg 119
           ||||||||||||||||| || |||||||||||
Sbjct: 942 caaaagattgcaatgtttgacaagaatggtgg 973
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>emb|BX831214.1|CNS0A0PY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS69ZC03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1571

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 88  caaaagattgcaatgttcgagaagaatggtgg 119
           ||||||||||||||||| || |||||||||||
Sbjct: 941 caaaagattgcaatgtttgacaagaatggtgg 972
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>dbj|AB025622.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFH8
          Length = 62420

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 88    caaaagattgcaatgttcgagaagaatggtgg 119
             ||||||||||||||||| || |||||||||||
Sbjct: 45564 caaaagattgcaatgtttgacaagaatggtgg 45533
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>dbj|AP003472.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB173C10, complete
             sequence
          Length = 103804

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 119   gaatgcaggctctgattcagta 140
             ||||||||||||||||||||||
Sbjct: 70622 gaatgcaggctctgattcagta 70601
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>dbj|AP000424.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1615E4
          Length = 177274

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 119  gaatgcaggctctgattcagta 140
            ||||||||||||||||||||||
Sbjct: 3132 gaatgcaggctctgattcagta 3111
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>gb|AC069503.25| Homo sapiens 12 BAC RP11-87C12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 186580

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 188   attgcatatatgatggtggtt 208
             |||||||||||||||||||||
Sbjct: 80426 attgcatatatgatggtggtt 80446
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>emb|AL731549.11| Human DNA sequence from clone RP11-113I9 on chromosome 10 Contains part
             of the gene for alpha-catenin-like protein (MGC26194)
             (VR22), complete sequence
          Length = 81853

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 120   aatgcaggctctgattcagta 140
             |||||||||||||||||||||
Sbjct: 32771 aatgcaggctctgattcagta 32751
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>emb|AL157814.14| Human DNA sequence from clone RP11-285E18 on chromosome 13q22.1-22.3
             Contains a novel gene, complete sequence
          Length = 111350

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 120   aatgcaggctctgattcagta 140
             |||||||||||||||||||||
Sbjct: 85328 aatgcaggctctgattcagta 85308
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>gb|AC110795.4| Homo sapiens BAC clone RP11-628A4 from 4, complete sequence
          Length = 75296

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 120   aatgcaggctctgattcagta 140
             |||||||||||||||||||||
Sbjct: 29199 aatgcaggctctgattcagta 29219
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>gb|AC154656.2| Mus musculus BAC clone RP24-268M5 from chromosome 16, complete sequence
          Length = 166376

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 239    atactgatctgaatgtgaagg 259
              |||||||||||||||||||||
Sbjct: 129716 atactgatctgaatgtgaagg 129736
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>gb|AC079250.7| Homo sapiens BAC clone RP11-62I18 from 2, complete sequence
          Length = 82938

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 120   aatgcaggctctgattcagta 140
             |||||||||||||||||||||
Sbjct: 42791 aatgcaggctctgattcagta 42811
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>emb|AL935195.14| Zebrafish DNA sequence from clone CH211-277C7 in linkage group 14,
              complete sequence
          Length = 194053

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 197    atgatggtggttactgtaagc 217
              |||||||||||||||||||||
Sbjct: 123172 atgatggtggttactgtaagc 123152
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>dbj|AP002992.4| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2655K5, complete
              sequence
          Length = 191589

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 120    aatgcaggctctgattcagta 140
              |||||||||||||||||||||
Sbjct: 110611 aatgcaggctctgattcagta 110591
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>dbj|AP002813.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-856M9, complete
             sequence
          Length = 187516

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 120   aatgcaggctctgattcagta 140
             |||||||||||||||||||||
Sbjct: 48384 aatgcaggctctgattcagta 48364
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>gb|BC053509.1| Homo sapiens 5,10-methylenetetrahydrofolate reductase (NADPH), mRNA
            (cDNA clone MGC:59799 IMAGE:6374885), complete cds
          Length = 6099

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 342  caccacacctgctggttttt 361
            ||||||||||||||||||||
Sbjct: 5969 caccacacctgctggttttt 5950
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>ref|NM_005957.3| Homo sapiens 5,10-methylenetetrahydrofolate reductase (NADPH)
            (MTHFR), mRNA
          Length = 7105

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 342  caccacacctgctggttttt 361
            ||||||||||||||||||||
Sbjct: 6102 caccacacctgctggttttt 6083
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>gb|BC018766.1| Homo sapiens 5,10-methylenetetrahydrofolate reductase (NADPH), mRNA
            (cDNA clone IMAGE:4299889), complete cds
          Length = 1363

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 342  caccacacctgctggttttt 361
            ||||||||||||||||||||
Sbjct: 1234 caccacacctgctggttttt 1215
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>gb|BC011614.2| Homo sapiens 5,10-methylenetetrahydrofolate reductase (NADPH), mRNA
            (cDNA clone IMAGE:3949285), partial cds
          Length = 1737

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 342  caccacacctgctggttttt 361
            ||||||||||||||||||||
Sbjct: 1041 caccacacctgctggttttt 1022
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>gb|AF398933.1| Homo sapiens methylenetetrahydrofolate reductase (MTHFR) gene, 3' UTR
          Length = 4948

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 342  caccacacctgctggttttt 361
            ||||||||||||||||||||
Sbjct: 3947 caccacacctgctggttttt 3928
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>emb|Z96074.4|HS399M14 Human DNA sequence from clone RP3-399M14 on chromosome Xq26.1-26.3,
             complete sequence
          Length = 155661

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 193   atatatgatggtggttactgtaagcttcatct 224
             ||||||||| ||| ||||| ||||||||||||
Sbjct: 34503 atatatgatcgtgcttactttaagcttcatct 34534
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>emb|AL953897.6| Human DNA sequence from clone RP11-56N19 on chromosome 1 Contains the
             3' end of a novel gene, the AGTRAP gene for angiotensin II
             receptor-associated protein, two novel genes, the MTHFR
             gene for 5,10-methylenetetrahydrofolate reductase (NADPH),
             the 5' end of the CLCN6 gene for chloride channel 6 and a
             CpG island, complete sequence
          Length = 102509

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   caccacacctgctggttttt 361
             ||||||||||||||||||||
Sbjct: 72757 caccacacctgctggttttt 72776
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>emb|AL365190.16| Human DNA sequence from clone RP11-512H14 on chromosome 9 Contains
            the 5' end of the TLE1 gene for transducin-like enhancer
            of split 1 (E(sp1) homolog, Drosophila) (ESG, GRG1), the
            5' end of a novel gene and two CpG isalnds, complete
            sequence
          Length = 89468

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 188  attgcatatatgatggtggt 207
            ||||||||||||||||||||
Sbjct: 3513 attgcatatatgatggtggt 3494
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>gb|AC087354.13| Homo sapiens chromosome 8, clone RP11-398H6, complete sequence
          Length = 184610

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    ttctacacactgtgttctct 72
             ||||||||||||||||||||
Sbjct: 28837 ttctacacactgtgttctct 28856
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>emb|AL035668.15|HS859D4 Human DNA sequence from clone RP5-859D4 on chromosome 20p12.1-13 Contains
              the BMP2 gene for bone morphogenetic protein 2, a novel
              gene and a CpG island, complete sequence
          Length = 173308

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    atgcaggctctgattcagta 140
              ||||||||||||||||||||
Sbjct: 128657 atgcaggctctgattcagta 128638
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>gb|AC109583.2| Homo sapiens chromosome 3 clone RP11-427P5, complete sequence
          Length = 177251

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 342  caccacacctgctggttttt 361
            ||||||||||||||||||||
Sbjct: 4997 caccacacctgctggttttt 4978
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>gb|AC005499.3| Arabidopsis thaliana chromosome 2 clone T6A23 map ve018, complete
             sequence
          Length = 107541

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    cacactgtgttctcttcttt 77
             ||||||||||||||||||||
Sbjct: 38714 cacactgtgttctcttcttt 38695
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>gb|AC022716.13| Homo sapiens chromosome 8, clone RP11-135I5, complete sequence
          Length = 163495

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   attgcatatatgatggtggt 207
             ||||||||||||||||||||
Sbjct: 40739 attgcatatatgatggtggt 40720
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>gb|AC105748.2| Homo sapiens chromosome 3 clone RP11-532I6, complete sequence
          Length = 162258

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 150    aacaacagcaggagttgcta 169
              ||||||||||||||||||||
Sbjct: 101942 aacaacagcaggagttgcta 101961
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>gb|AC007923.7| Homo sapiens chromosome 17, clone RP11-805L22, complete sequence
          Length = 180270

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   aatgcaggctctgattcagt 139
             ||||||||||||||||||||
Sbjct: 41343 aatgcaggctctgattcagt 41362
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>gb|AC084209.6| Homo sapiens BAC clone RP11-462C24 from 4, complete sequence
          Length = 151980

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   attgcatatatgatggtggt 207
             ||||||||||||||||||||
Sbjct: 11938 attgcatatatgatggtggt 11919
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>gb|AC021242.10| Homo sapiens chromosome 8, clone RP11-375N15, complete sequence
          Length = 196152

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    agaagaatggtggaatgcag 126
              ||||||||||||||||||||
Sbjct: 131784 agaagaatggtggaatgcag 131765
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>gb|AC106821.2| Homo sapiens chromosome 5 clone RP11-730N24, complete sequence
          Length = 151355

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    attgcatatatgatggtggt 207
              ||||||||||||||||||||
Sbjct: 104278 attgcatatatgatggtggt 104297
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>gb|AC158545.2| Mus musculus 10 BAC RP24-401G4 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 203847

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 236    gtcatactgatctgaatgtg 255
              ||||||||||||||||||||
Sbjct: 133415 gtcatactgatctgaatgtg 133434
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>gb|AC053480.5|AC053480 Homo sapiens chromosome 8, clone RP11-526P7, complete sequence
          Length = 158267

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     ttctacacactgtgttctct 72
              ||||||||||||||||||||
Sbjct: 133899 ttctacacactgtgttctct 133918
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>gb|AF260233.1|AF260233 Homo sapiens methylenetetrahydrofolate reductase (MTHFR) gene, exon
            11 and 3' UTR, alternatively spliced
          Length = 5069

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 342  caccacacctgctggttttt 361
            ||||||||||||||||||||
Sbjct: 3954 caccacacctgctggttttt 3935
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>gb|AC084451.1|AC084451 Caenorhabditis briggsae cosmid CB023N02, complete sequence
          Length = 79813

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 492   ctttccagtgatcggatcaa 511
             ||||||||||||||||||||
Sbjct: 77386 ctttccagtgatcggatcaa 77405
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>gb|AC079905.28| Homo sapiens 12 BAC RP11-813P10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 189456

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   attgcatatatgatggtggt 207
             ||||||||||||||||||||
Sbjct: 22103 attgcatatatgatggtggt 22084
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>gb|AC007340.8| Homo sapiens chromosome 16 clone RP11-358O5, complete sequence
          Length = 172833

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   attgcatatatgatggtggt 207
             ||||||||||||||||||||
Sbjct: 48272 attgcatatatgatggtggt 48291
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>gb|AF040249.1|AF040249 Homo sapiens bone morphogenetic protein 2 (BMP-2) gene, complete cds
          Length = 16133

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   atgcaggctctgattcagta 140
             ||||||||||||||||||||
Sbjct: 11095 atgcaggctctgattcagta 11076
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>dbj|AB209113.1| Homo sapiens mRNA for 5,10-methylenetetrahydrofolate reductase
            (NADPH) variant protein
          Length = 5953

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 342  caccacacctgctggttttt 361
            ||||||||||||||||||||
Sbjct: 4947 caccacacctgctggttttt 4928
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>gb|AC131263.6| Homo sapiens chromosome 11, clone RP11-348A11, complete sequence
          Length = 179568

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   tgcaggctctgattcagtat 141
             ||||||||||||||||||||
Sbjct: 10453 tgcaggctctgattcagtat 10472


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,732,645
Number of Sequences: 3902068
Number of extensions: 4732645
Number of successful extensions: 80350
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80117
Number of HSP's gapped (non-prelim): 219
length of query: 571
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 548
effective length of database: 17,143,297,704
effective search space: 9394527141792
effective search space used: 9394527141792
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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