ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags37g21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_196498.1| Oryza sativa (japonica cultivar-group) putative... 141 1e-30
2gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica culti... 141 1e-30
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 141 1e-30
4gb|AF296279.1|AF296279 Oryza sativa subsp. japonica class III ch... 141 1e-30
5gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nb... 141 1e-30
6dbj|AK104397.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 1e-30
7dbj|AK104202.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 1e-30
8dbj|AK104100.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 1e-30
9dbj|AK059767.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 1e-30
10gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 141 1e-30
11ref|NM_196501.1| Oryza sativa (japonica cultivar-group) putative... 101 9e-19
12dbj|AK119555.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 9e-19
13dbj|AK104292.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 9e-19
14dbj|AK104222.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 9e-19
15dbj|AK099101.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 9e-19
16dbj|AK060033.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 9e-19
17dbj|AB035668.1| Tulipa bakeri tbc1 mRNA for bulb chitinase-1, co... 58 1e-05
18gb|AY486934.1| Salvadora mexicana cytochrome b (cytb) gene, comp... 44 0.18
19ref|NM_015232.1| Homo sapiens IQ motif and Sec7 domain 3 (IQSEC3... 44 0.18
20dbj|AB029033.1| Homo sapiens mRNA for KIAA1110 protein, partial cds 44 0.18
21dbj|AK091953.1| Homo sapiens cDNA FLJ34634 fis, clone KIDNE20160... 44 0.18
22ref|XM_936831.1| PREDICTED: Homo sapiens similar to IQ motif and... 44 0.18
23gb|AC026369.21|AC026369 Homo sapiens 12 BAC RP11-598F7 (Roswell ... 44 0.18
24ref|NM_196494.1| Oryza sativa (japonica cultivar-group) putative... 42 0.73
25gb|AF350426.1| Oryza sativa (japonica cultivar-group) class III ... 42 0.73
26gb|AF330230.1| Oryza sativa chitinase mRNA, partial cds 42 0.73
27dbj|AK071453.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.73
28dbj|AK061215.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.73
29ref|XM_520669.1| PREDICTED: Pan troglodytes similar to Hypotheti... 40 2.9
30ref|XM_480122.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.9
31gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genom... 40 2.9
32gb|AC092779.5| Oryza sativa chromosome 3 BAC OSJNBb0024N19 genom... 40 2.9
33ref|NM_144568.1| Homo sapiens transmembrane protein 55B (TMEM55B... 40 2.9
34ref|XM_323289.1| Neurospora crassa OR74A hypothetical protein (N... 40 2.9
35ref|XM_952517.1| Neurospora crassa OR74A hypothetical protein (N... 40 2.9
36gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 2.9
37emb|BX908812.1| Neurospora crassa DNA linkage group VI Cosmid co... 40 2.9
38gb|BC020947.1| Homo sapiens transmembrane protein 55B, mRNA (cDN... 40 2.9
39gb|BC002867.1| Homo sapiens transmembrane protein 55B, mRNA (cDN... 40 2.9
40emb|CR625488.1| full-length cDNA clone CS0DL002YB24 of B cells (... 40 2.9
41emb|CR620640.1| full-length cDNA clone CS0DE004YA23 of Placenta ... 40 2.9
42emb|CR620252.1| full-length cDNA clone CS0DL005YG13 of B cells (... 40 2.9
43emb|CR616831.1| full-length cDNA clone CS0DF026YG22 of Fetal bra... 40 2.9
44emb|CR614912.1| full-length cDNA clone CS0DB008YA05 of Neuroblas... 40 2.9
45emb|CR611742.1| full-length cDNA clone CS0DJ005YH19 of T cells (... 40 2.9
46emb|CR603399.1| full-length cDNA clone CS0DB008YB02 of Neuroblas... 40 2.9
47emb|CR598955.1| full-length cDNA clone CS0DC007YJ08 of Neuroblas... 40 2.9
48dbj|AB169068.1| Macaca fascicularis testis cDNA, clone: QtsA-170... 40 2.9
49dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
50dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
51dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
52dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
53dbj|AP004461.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
54dbj|AK112117.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.9
55dbj|AK111808.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.9
56dbj|AK103539.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.9
57dbj|AK070950.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.9
58emb|CR925804.8| Zebrafish DNA sequence from clone CH211-151M7 in... 40 2.9
59emb|AL355075.6|CNS05TC9 Human chromosome 14 DNA sequence BAC R-2... 40 2.9
60emb|BX248025.1|CNSLT1I6V human full-length cDNA clone CS0DC014YA... 40 2.9
61emb|BX161490.1|CNSLT1I6X human full-length cDNA clone CS0DJ006YG... 40 2.9
62emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 2.9
63emb|AL137727.1|HSM802274 Homo sapiens mRNA; cDNA DKFZp434M0519 (... 40 2.9
64dbj|AB050522.1| Macaca fascicularis brain cDNA, clone:QnpA-20821 40 2.9 
>ref|NM_196498.1| Oryza sativa (japonica cultivar-group) putative class III chitinase
           (OSJNBa0032I20.10), mRNA
          Length = 861

 Score =  141 bits (71), Expect = 1e-30
 Identities = 92/99 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagtacatcggcgcgcagttcaccggcgtccggttcaccgacgtgccggtcaacaccggc 60
           ||||||||||||||||||||||||||||| || ||| |||||||||| |||||| | |||
Sbjct: 25  gagtacatcggcgcgcagttcaccggcgtgcgcttctccgacgtgcccgtcaacccgggc 84

                                                  
Query: 61  gtcagcttccacttcatcctcgccttcgccatcgactac 99
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 85  ctcagcttccacttcatcctcgccttcgccatcgactac 123
to top
>gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare Clone OSJNBa0061K21 From Chromosome 10,
             complete sequence
          Length = 112721

 Score =  141 bits (71), Expect = 1e-30
 Identities = 92/99 (92%)
 Strand = Plus / Plus

                                                                         
Query: 1     gagtacatcggcgcgcagttcaccggcgtccggttcaccgacgtgccggtcaacaccggc 60
             ||||||||||||||||||||||||||||| || ||| |||||||||| |||||| | |||
Sbjct: 15591 gagtacatcggcgcgcagttcaccggcgtgcgcttctccgacgtgcccgtcaacccgggc 15650

                                                    
Query: 61    gtcagcttccacttcatcctcgccttcgccatcgactac 99
              ||||||||||||||||||||||||||||||||||||||
Sbjct: 15651 ctcagcttccacttcatcctcgccttcgccatcgactac 15689



 Score =  101 bits (51), Expect = 9e-19
 Identities = 87/99 (87%)
 Strand = Plus / Plus

                                                                         
Query: 1     gagtacatcggcgcgcagttcaccggcgtccggttcaccgacgtgccggtcaacaccggc 60
             |||||||||||||||||||||||||| ||||| ||| ||||||||||  ||||| |   |
Sbjct: 28037 gagtacatcggcgcgcagttcaccggagtccgcttctccgacgtgcccatcaacccaaac 28096

                                                    
Query: 61    gtcagcttccacttcatcctcgccttcgccatcgactac 99
              |||||||| ||||||||||| |||||||||||||||||
Sbjct: 28097 ctcagcttcaacttcatcctctccttcgccatcgactac 28135



 Score = 46.1 bits (23), Expect = 0.047
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 125   cgccgaccaacggcgtcttcaggccgntctgggacacgggcaacct 170
             |||||||||||||||| |||  ||||  ||||||||||| ||||||
Sbjct: 28164 cgccgaccaacggcgtgttctcgccgtactgggacacggccaacct 28209
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  141 bits (71), Expect = 1e-30
 Identities = 92/99 (92%)
 Strand = Plus / Plus

                                                                            
Query: 1        gagtacatcggcgcgcagttcaccggcgtccggttcaccgacgtgccggtcaacaccggc 60
                ||||||||||||||||||||||||||||| || ||| |||||||||| |||||| | |||
Sbjct: 14075953 gagtacatcggcgcgcagttcaccggcgtgcgcttctccgacgtgcccgtcaacccgggc 14076012

                                                       
Query: 61       gtcagcttccacttcatcctcgccttcgccatcgactac 99
                 ||||||||||||||||||||||||||||||||||||||
Sbjct: 14076013 ctcagcttccacttcatcctcgccttcgccatcgactac 14076051



 Score =  101 bits (51), Expect = 9e-19
 Identities = 87/99 (87%)
 Strand = Plus / Plus

                                                                            
Query: 1        gagtacatcggcgcgcagttcaccggcgtccggttcaccgacgtgccggtcaacaccggc 60
                |||||||||||||||||||||||||| ||||| ||| ||||||||||  ||||| |   |
Sbjct: 14088399 gagtacatcggcgcgcagttcaccggagtccgcttctccgacgtgcccatcaacccaaac 14088458

                                                       
Query: 61       gtcagcttccacttcatcctcgccttcgccatcgactac 99
                 |||||||| ||||||||||| |||||||||||||||||
Sbjct: 14088459 ctcagcttcaacttcatcctctccttcgccatcgactac 14088497



 Score = 46.1 bits (23), Expect = 0.047
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                              
Query: 125      cgccgaccaacggcgtcttcaggccgntctgggacacgggcaacct 170
                |||||||||||||||| |||  ||||  ||||||||||| ||||||
Sbjct: 14088526 cgccgaccaacggcgtgttctcgccgtactgggacacggccaacct 14088571



 Score = 42.1 bits (21), Expect = 0.73
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 71       acttcatcctcgccttcgccatcgactac 99
                |||||||||||||||||  ||||||||||
Sbjct: 14045010 acttcatcctcgccttcatcatcgactac 14045038
to top
>gb|AF296279.1|AF296279 Oryza sativa subsp. japonica class III chitinase (chib1) gene,
           complete cds
          Length = 1038

 Score =  141 bits (71), Expect = 1e-30
 Identities = 92/99 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagtacatcggcgcgcagttcaccggcgtccggttcaccgacgtgccggtcaacaccggc 60
           ||||||||||||||||||||||||||||| || ||| |||||||||| |||||| | |||
Sbjct: 76  gagtacatcggcgcgcagttcaccggcgtgcgcttctccgacgtgcccgtcaacccgggc 135

                                                  
Query: 61  gtcagcttccacttcatcctcgccttcgccatcgactac 99
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 136 ctcagcttccacttcatcctcgccttcgccatcgactac 174
to top
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence
          Length = 144651

 Score =  141 bits (71), Expect = 1e-30
 Identities = 92/99 (92%)
 Strand = Plus / Plus

                                                                         
Query: 1     gagtacatcggcgcgcagttcaccggcgtccggttcaccgacgtgccggtcaacaccggc 60
             ||||||||||||||||||||||||||||| || ||| |||||||||| |||||| | |||
Sbjct: 92082 gagtacatcggcgcgcagttcaccggcgtgcgcttctccgacgtgcccgtcaacccgggc 92141

                                                    
Query: 61    gtcagcttccacttcatcctcgccttcgccatcgactac 99
              ||||||||||||||||||||||||||||||||||||||
Sbjct: 92142 ctcagcttccacttcatcctcgccttcgccatcgactac 92180



 Score =  101 bits (51), Expect = 9e-19
 Identities = 87/99 (87%)
 Strand = Plus / Plus

                                                                          
Query: 1      gagtacatcggcgcgcagttcaccggcgtccggttcaccgacgtgccggtcaacaccggc 60
              |||||||||||||||||||||||||| ||||| ||| ||||||||||  ||||| |   |
Sbjct: 104528 gagtacatcggcgcgcagttcaccggagtccgcttctccgacgtgcccatcaacccaaac 104587

                                                     
Query: 61     gtcagcttccacttcatcctcgccttcgccatcgactac 99
               |||||||| ||||||||||| |||||||||||||||||
Sbjct: 104588 ctcagcttcaacttcatcctctccttcgccatcgactac 104626



 Score = 46.1 bits (23), Expect = 0.047
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                            
Query: 125    cgccgaccaacggcgtcttcaggccgntctgggacacgggcaacct 170
              |||||||||||||||| |||  ||||  ||||||||||| ||||||
Sbjct: 104655 cgccgaccaacggcgtgttctcgccgtactgggacacggccaacct 104700



 Score = 42.1 bits (21), Expect = 0.73
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 71    acttcatcctcgccttcgccatcgactac 99
             |||||||||||||||||  ||||||||||
Sbjct: 61139 acttcatcctcgccttcatcatcgactac 61167
to top
>dbj|AK104397.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C10, full
           insert sequence
          Length = 989

 Score =  141 bits (71), Expect = 1e-30
 Identities = 92/99 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagtacatcggcgcgcagttcaccggcgtccggttcaccgacgtgccggtcaacaccggc 60
           ||||||||||||||||||||||||||||| || ||| |||||||||| |||||| | |||
Sbjct: 81  gagtacatcggcgcgcagttcaccggcgtgcgcttctccgacgtgcccgtcaacccgggc 140

                                                  
Query: 61  gtcagcttccacttcatcctcgccttcgccatcgactac 99
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ctcagcttccacttcatcctcgccttcgccatcgactac 179
to top
>dbj|AK104202.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-C04, full
           insert sequence
          Length = 1053

 Score =  141 bits (71), Expect = 1e-30
 Identities = 92/99 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagtacatcggcgcgcagttcaccggcgtccggttcaccgacgtgccggtcaacaccggc 60
           ||||||||||||||||||||||||||||| || ||| |||||||||| |||||| | |||
Sbjct: 81  gagtacatcggcgcgcagttcaccggcgtgcgcttctccgacgtgcccgtcaacccgggc 140

                                                  
Query: 61  gtcagcttccacttcatcctcgccttcgccatcgactac 99
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ctcagcttccacttcatcctcgccttcgccatcgactac 179
to top
>dbj|AK104100.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-G07, full
           insert sequence
          Length = 1026

 Score =  141 bits (71), Expect = 1e-30
 Identities = 92/99 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagtacatcggcgcgcagttcaccggcgtccggttcaccgacgtgccggtcaacaccggc 60
           ||||||||||||||||||||||||||||| || ||| |||||||||| |||||| | |||
Sbjct: 81  gagtacatcggcgcgcagttcaccggcgtgcgcttctccgacgtgcccgtcaacccgggc 140

                                                  
Query: 61  gtcagcttccacttcatcctcgccttcgccatcgactac 99
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ctcagcttccacttcatcctcgccttcgccatcgactac 179
to top
>dbj|AK059767.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-G07, full
           insert sequence
          Length = 1069

 Score =  141 bits (71), Expect = 1e-30
 Identities = 92/99 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagtacatcggcgcgcagttcaccggcgtccggttcaccgacgtgccggtcaacaccggc 60
           ||||||||||||||||||||||||||||| || ||| |||||||||| |||||| | |||
Sbjct: 81  gagtacatcggcgcgcagttcaccggcgtgcgcttctccgacgtgcccgtcaacccgggc 140

                                                  
Query: 61  gtcagcttccacttcatcctcgccttcgccatcgactac 99
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ctcagcttccacttcatcctcgccttcgccatcgactac 179
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  141 bits (71), Expect = 1e-30
 Identities = 92/99 (92%)
 Strand = Plus / Plus

                                                                            
Query: 1        gagtacatcggcgcgcagttcaccggcgtccggttcaccgacgtgccggtcaacaccggc 60
                ||||||||||||||||||||||||||||| || ||| |||||||||| |||||| | |||
Sbjct: 14084195 gagtacatcggcgcgcagttcaccggcgtgcgcttctccgacgtgcccgtcaacccgggc 14084254

                                                       
Query: 61       gtcagcttccacttcatcctcgccttcgccatcgactac 99
                 ||||||||||||||||||||||||||||||||||||||
Sbjct: 14084255 ctcagcttccacttcatcctcgccttcgccatcgactac 14084293



 Score =  101 bits (51), Expect = 9e-19
 Identities = 87/99 (87%)
 Strand = Plus / Plus

                                                                            
Query: 1        gagtacatcggcgcgcagttcaccggcgtccggttcaccgacgtgccggtcaacaccggc 60
                |||||||||||||||||||||||||| ||||| ||| ||||||||||  ||||| |   |
Sbjct: 14096641 gagtacatcggcgcgcagttcaccggagtccgcttctccgacgtgcccatcaacccaaac 14096700

                                                       
Query: 61       gtcagcttccacttcatcctcgccttcgccatcgactac 99
                 |||||||| ||||||||||| |||||||||||||||||
Sbjct: 14096701 ctcagcttcaacttcatcctctccttcgccatcgactac 14096739



 Score = 46.1 bits (23), Expect = 0.047
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                              
Query: 125      cgccgaccaacggcgtcttcaggccgntctgggacacgggcaacct 170
                |||||||||||||||| |||  ||||  ||||||||||| ||||||
Sbjct: 14096768 cgccgaccaacggcgtgttctcgccgtactgggacacggccaacct 14096813



 Score = 42.1 bits (21), Expect = 0.73
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 71       acttcatcctcgccttcgccatcgactac 99
                |||||||||||||||||  ||||||||||
Sbjct: 14053252 acttcatcctcgccttcatcatcgactac 14053280
to top
>ref|NM_196501.1| Oryza sativa (japonica cultivar-group) putative class III chitinase
           (OSJNBa0032I20.12), mRNA
          Length = 867

 Score =  101 bits (51), Expect = 9e-19
 Identities = 87/99 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagtacatcggcgcgcagttcaccggcgtccggttcaccgacgtgccggtcaacaccggc 60
           |||||||||||||||||||||||||| ||||| ||| ||||||||||  ||||| |   |
Sbjct: 25  gagtacatcggcgcgcagttcaccggagtccgcttctccgacgtgcccatcaacccaaac 84

                                                  
Query: 61  gtcagcttccacttcatcctcgccttcgccatcgactac 99
            |||||||| ||||||||||| |||||||||||||||||
Sbjct: 85  ctcagcttcaacttcatcctctccttcgccatcgactac 123



 Score = 46.1 bits (23), Expect = 0.047
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 125 cgccgaccaacggcgtcttcaggccgntctgggacacgggcaacct 170
           |||||||||||||||| |||  ||||  ||||||||||| ||||||
Sbjct: 152 cgccgaccaacggcgtgttctcgccgtactgggacacggccaacct 197
to top
>dbj|AK119555.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E12, full
           insert sequence
          Length = 1089

 Score =  101 bits (51), Expect = 9e-19
 Identities = 87/99 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagtacatcggcgcgcagttcaccggcgtccggttcaccgacgtgccggtcaacaccggc 60
           |||||||||||||||||||||||||| ||||| ||| ||||||||||  ||||| |   |
Sbjct: 49  gagtacatcggcgcgcagttcaccggagtccgcttctccgacgtgcccatcaacccaaac 108

                                                  
Query: 61  gtcagcttccacttcatcctcgccttcgccatcgactac 99
            |||||||| ||||||||||| |||||||||||||||||
Sbjct: 109 ctcagcttcaacttcatcctctccttcgccatcgactac 147
to top
>dbj|AK104292.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F06, full
           insert sequence
          Length = 1108

 Score =  101 bits (51), Expect = 9e-19
 Identities = 87/99 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagtacatcggcgcgcagttcaccggcgtccggttcaccgacgtgccggtcaacaccggc 60
           |||||||||||||||||||||||||| ||||| ||| ||||||||||  ||||| |   |
Sbjct: 44  gagtacatcggcgcgcagttcaccggagtccgcttctccgacgtgcccatcaacccaaac 103

                                                  
Query: 61  gtcagcttccacttcatcctcgccttcgccatcgactac 99
            |||||||| ||||||||||| |||||||||||||||||
Sbjct: 104 ctcagcttcaacttcatcctctccttcgccatcgactac 142



 Score = 46.1 bits (23), Expect = 0.047
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 125 cgccgaccaacggcgtcttcaggccgntctgggacacgggcaacct 170
           |||||||||||||||| |||  ||||  ||||||||||| ||||||
Sbjct: 171 cgccgaccaacggcgtgttctcgccgtactgggacacggccaacct 216
to top
>dbj|AK104222.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E05, full
           insert sequence
          Length = 1069

 Score =  101 bits (51), Expect = 9e-19
 Identities = 87/99 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagtacatcggcgcgcagttcaccggcgtccggttcaccgacgtgccggtcaacaccggc 60
           |||||||||||||||||||||||||| ||||| ||| ||||||||||  ||||| |   |
Sbjct: 49  gagtacatcggcgcgcagttcaccggagtccgcttctccgacgtgcccatcaacccaaac 108

                                                  
Query: 61  gtcagcttccacttcatcctcgccttcgccatcgactac 99
            |||||||| ||||||||||| |||||||||||||||||
Sbjct: 109 ctcagcttcaacttcatcctctccttcgccatcgactac 147



 Score = 46.1 bits (23), Expect = 0.047
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 125 cgccgaccaacggcgtcttcaggccgntctgggacacgggcaacct 170
           |||||||||||||||| |||  ||||  ||||||||||| ||||||
Sbjct: 176 cgccgaccaacggcgtgttctcgccgtactgggacacggccaacct 221
to top
>dbj|AK099101.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025I19, full
           insert sequence
          Length = 1068

 Score =  101 bits (51), Expect = 9e-19
 Identities = 87/99 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagtacatcggcgcgcagttcaccggcgtccggttcaccgacgtgccggtcaacaccggc 60
           |||||||||||||||||||||||||| ||||| ||| ||||||||||  ||||| |   |
Sbjct: 48  gagtacatcggcgcgcagttcaccggagtccgcttctccgacgtgcccatcaacccaaac 107

                                                  
Query: 61  gtcagcttccacttcatcctcgccttcgccatcgactac 99
            |||||||| ||||||||||| |||||||||||||||||
Sbjct: 108 ctcagcttcaacttcatcctctccttcgccatcgactac 146



 Score = 46.1 bits (23), Expect = 0.047
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 125 cgccgaccaacggcgtcttcaggccgntctgggacacgggcaacct 170
           |||||||||||||||| |||  ||||  ||||||||||| ||||||
Sbjct: 175 cgccgaccaacggcgtgttctcgccgtactgggacacggccaacct 220
to top
>dbj|AK060033.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H08, full
           insert sequence
          Length = 1134

 Score =  101 bits (51), Expect = 9e-19
 Identities = 87/99 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagtacatcggcgcgcagttcaccggcgtccggttcaccgacgtgccggtcaacaccggc 60
           |||||||||||||||||||||||||| ||||| ||| ||||||||||  ||||| |   |
Sbjct: 49  gagtacatcggcgcgcagttcaccggagtccgcttctccgacgtgcccatcaacccaaac 108

                                                  
Query: 61  gtcagcttccacttcatcctcgccttcgccatcgactac 99
            |||||||| ||||||||||| |||||||||||||||||
Sbjct: 109 ctcagcttcaacttcatcctctccttcgccatcgactac 147



 Score = 46.1 bits (23), Expect = 0.047
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 125 cgccgaccaacggcgtcttcaggccgntctgggacacgggcaacct 170
           |||||||||||||||| |||  ||||  ||||||||||| ||||||
Sbjct: 176 cgccgaccaacggcgtgttctcgccgtactgggacacggccaacct 221
to top
>dbj|AB035668.1| Tulipa bakeri tbc1 mRNA for bulb chitinase-1, complete cds
          Length = 1106

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 67  ttccacttcatcctcgccttcgccatcgactac 99
           ||||||||||||||||| |||||||||||||||
Sbjct: 171 ttccacttcatcctcgctttcgccatcgactac 203
to top
>gb|AY486934.1| Salvadora mexicana cytochrome b (cytb) gene, complete cds;
           mitochondrial
          Length = 1117

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 68  tccacttcatcctcgccttcgccatc 93
           |||||||||||||| |||||||||||
Sbjct: 518 tccacttcatcctccccttcgccatc 543
to top
>ref|NM_015232.1| Homo sapiens IQ motif and Sec7 domain 3 (IQSEC3), mRNA
          Length = 2699

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 72   cttcatcctcgccttcgccatc 93
            ||||||||||||||||||||||
Sbjct: 1840 cttcatcctcgccttcgccatc 1861
to top
>dbj|AB029033.1| Homo sapiens mRNA for KIAA1110 protein, partial cds
          Length = 5536

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 72   cttcatcctcgccttcgccatc 93
            ||||||||||||||||||||||
Sbjct: 1012 cttcatcctcgccttcgccatc 1033
to top
>dbj|AK091953.1| Homo sapiens cDNA FLJ34634 fis, clone KIDNE2016036, weakly similar to
            ARF NUCLEOTIDE-BINDING SITE OPENER
          Length = 2699

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 72   cttcatcctcgccttcgccatc 93
            ||||||||||||||||||||||
Sbjct: 1840 cttcatcctcgccttcgccatc 1861
to top
>ref|XM_936831.1| PREDICTED: Homo sapiens similar to IQ motif and Sec7 domain 3
            (LOC647763), mRNA
          Length = 6572

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 72   cttcatcctcgccttcgccatc 93
            ||||||||||||||||||||||
Sbjct: 1740 cttcatcctcgccttcgccatc 1761
to top
>gb|AC026369.21|AC026369 Homo sapiens 12 BAC RP11-598F7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 136725

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 72    cttcatcctcgccttcgccatc 93
             ||||||||||||||||||||||
Sbjct: 15711 cttcatcctcgccttcgccatc 15690
to top
>ref|NM_196494.1| Oryza sativa (japonica cultivar-group) putative class III chitinase
           RCB4 (OSJNBa0032I20.7), mRNA
          Length = 924

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 71  acttcatcctcgccttcgccatcgactac 99
           |||||||||||||||||  ||||||||||
Sbjct: 167 acttcatcctcgccttcatcatcgactac 195
to top
>gb|AF350426.1| Oryza sativa (japonica cultivar-group) class III chitinase RCB4
           (Rcb4) mRNA, complete cds
          Length = 1158

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 71  acttcatcctcgccttcgccatcgactac 99
           |||||||||||||||||  ||||||||||
Sbjct: 219 acttcatcctcgccttcatcatcgactac 247
to top
>gb|AF330230.1| Oryza sativa chitinase mRNA, partial cds
          Length = 941

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 71  acttcatcctcgccttcgccatcgactac 99
           |||||||||||||||||  ||||||||||
Sbjct: 92  acttcatcctcgccttcatcatcgactac 120
to top
>dbj|AK071453.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093F02, full
           insert sequence
          Length = 1211

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 71  acttcatcctcgccttcgccatcgactac 99
           |||||||||||||||||  ||||||||||
Sbjct: 220 acttcatcctcgccttcatcatcgactac 248
to top
>dbj|AK061215.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-E04, full
           insert sequence
          Length = 1096

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 71  acttcatcctcgccttcgccatcgactac 99
           |||||||||||||||||  ||||||||||
Sbjct: 105 acttcatcctcgccttcatcatcgactac 133
to top
>ref|XM_520669.1| PREDICTED: Pan troglodytes similar to Hypothetical protein C14orf9
           (LOC465201), mRNA
          Length = 1160

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ctgccgccatggccgccacc 195
           ||||||||||||||||||||
Sbjct: 117 ctgccgccatggccgccacc 98
to top
>ref|XM_480122.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1080

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgccatggccgccaccaa 197
           ||||||||||||||||||||
Sbjct: 811 gccgccatggccgccaccaa 830
to top
>gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genomic sequence, complete
              sequence
          Length = 150155

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 173    cccctgccgccatggccgcc 192
              ||||||||||||||||||||
Sbjct: 137409 cccctgccgccatggccgcc 137390
to top
>gb|AC092779.5| Oryza sativa chromosome 3 BAC OSJNBb0024N19 genomic sequence, complete
             sequence
          Length = 121849

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   cccctgccgccatggccgcc 192
             ||||||||||||||||||||
Sbjct: 11905 cccctgccgccatggccgcc 11886
to top
>ref|NM_144568.1| Homo sapiens transmembrane protein 55B (TMEM55B), mRNA
          Length = 1701

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ctgccgccatggccgccacc 195
           ||||||||||||||||||||
Sbjct: 162 ctgccgccatggccgccacc 143
to top
>ref|XM_323289.1| Neurospora crassa OR74A hypothetical protein (NCU03971.1) partial
           mRNA
          Length = 1662

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 171 cacccctgccgccatggccgccac 194
           |||||||||||||||| |||||||
Sbjct: 727 cacccctgccgccatgaccgccac 704
to top
>ref|XM_952517.1| Neurospora crassa OR74A hypothetical protein (NCU03971.1) partial
           mRNA
          Length = 1662

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 171 cacccctgccgccatggccgccac 194
           |||||||||||||||| |||||||
Sbjct: 727 cacccctgccgccatgaccgccac 704
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 173      cccctgccgccatggccgcc 192
                ||||||||||||||||||||
Sbjct: 27166986 cccctgccgccatggccgcc 27167005
to top
>emb|BX908812.1| Neurospora crassa DNA linkage group VI Cosmid contig G17A4
          Length = 134053

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 171  cacccctgccgccatggccgccac 194
            |||||||||||||||| |||||||
Sbjct: 2133 cacccctgccgccatgaccgccac 2110
to top
>gb|BC020947.1| Homo sapiens transmembrane protein 55B, mRNA (cDNA clone MGC:26684
           IMAGE:4816227), complete cds
          Length = 1701

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ctgccgccatggccgccacc 195
           ||||||||||||||||||||
Sbjct: 162 ctgccgccatggccgccacc 143
to top
>gb|BC002867.1| Homo sapiens transmembrane protein 55B, mRNA (cDNA clone MGC:11248
           IMAGE:3940519), complete cds
          Length = 1644

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ctgccgccatggccgccacc 195
           ||||||||||||||||||||
Sbjct: 79  ctgccgccatggccgccacc 60
to top
>emb|CR625488.1| full-length cDNA clone CS0DL002YB24 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1600

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ctgccgccatggccgccacc 195
           ||||||||||||||||||||
Sbjct: 106 ctgccgccatggccgccacc 87
to top
>emb|CR620640.1| full-length cDNA clone CS0DE004YA23 of Placenta of Homo sapiens
           (human)
          Length = 1623

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ctgccgccatggccgccacc 195
           ||||||||||||||||||||
Sbjct: 114 ctgccgccatggccgccacc 95
to top
>emb|CR620252.1| full-length cDNA clone CS0DL005YG13 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1506

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ctgccgccatggccgccacc 195
           ||||||||||||||||||||
Sbjct: 118 ctgccgccatggccgccacc 99
to top
>emb|CR616831.1| full-length cDNA clone CS0DF026YG22 of Fetal brain of Homo sapiens
           (human)
          Length = 1593

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ctgccgccatggccgccacc 195
           ||||||||||||||||||||
Sbjct: 98  ctgccgccatggccgccacc 79
to top
>emb|CR614912.1| full-length cDNA clone CS0DB008YA05 of Neuroblastoma Cot
           10-normalized of Homo sapiens (human)
          Length = 1650

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ctgccgccatggccgccacc 195
           ||||||||||||||||||||
Sbjct: 104 ctgccgccatggccgccacc 85
to top
>emb|CR611742.1| full-length cDNA clone CS0DJ005YH19 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 1024

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ctgccgccatggccgccacc 195
           ||||||||||||||||||||
Sbjct: 90  ctgccgccatggccgccacc 71
to top
>emb|CR603399.1| full-length cDNA clone CS0DB008YB02 of Neuroblastoma Cot
           10-normalized of Homo sapiens (human)
          Length = 1633

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ctgccgccatggccgccacc 195
           ||||||||||||||||||||
Sbjct: 104 ctgccgccatggccgccacc 85
to top
>emb|CR598955.1| full-length cDNA clone CS0DC007YJ08 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1617

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ctgccgccatggccgccacc 195
           ||||||||||||||||||||
Sbjct: 110 ctgccgccatggccgccacc 91
to top
>dbj|AB169068.1| Macaca fascicularis testis cDNA, clone: QtsA-17009, similar to
           human chromosome 14 open reading frame 9 (C14orf9),
           mRNA, RefSeq: NM_144568.1
          Length = 1576

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ctgccgccatggccgccacc 195
           ||||||||||||||||||||
Sbjct: 119 ctgccgccatggccgccacc 100
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 178     gccgccatggccgccaccaa 197
               ||||||||||||||||||||
Sbjct: 2942909 gccgccatggccgccaccaa 2942890
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 178      gccgccatggccgccaccaa 197
                ||||||||||||||||||||
Sbjct: 29065114 gccgccatggccgccaccaa 29065095
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 173      cccctgccgccatggccgcc 192
                ||||||||||||||||||||
Sbjct: 27258309 cccctgccgccatggccgcc 27258328
to top
>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0596H10
          Length = 166570

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   gccgccatggccgccaccaa 197
             ||||||||||||||||||||
Sbjct: 80101 gccgccatggccgccaccaa 80082
to top
>dbj|AP004461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0443G08
          Length = 162139

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 178    gccgccatggccgccaccaa 197
              ||||||||||||||||||||
Sbjct: 115971 gccgccatggccgccaccaa 115952
to top
>dbj|AK112117.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-C03, full
           insert sequence
          Length = 1669

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgccatggccgccaccaa 197
           ||||||||||||||||||||
Sbjct: 970 gccgccatggccgccaccaa 989
to top
>dbj|AK111808.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114D05, full
            insert sequence
          Length = 1729

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 178  gccgccatggccgccaccaa 197
            ||||||||||||||||||||
Sbjct: 1029 gccgccatggccgccaccaa 1048
to top
>dbj|AK103539.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132C02, full
           insert sequence
          Length = 1668

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 cccctgccgccatggccgcc 192
           ||||||||||||||||||||
Sbjct: 54  cccctgccgccatggccgcc 73
to top
>dbj|AK070950.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023070H04, full
           insert sequence
          Length = 805

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgccatggccgccaccaa 197
           ||||||||||||||||||||
Sbjct: 181 gccgccatggccgccaccaa 200
to top
>emb|CR925804.8| Zebrafish DNA sequence from clone CH211-151M7 in linkage group 14,
             complete sequence
          Length = 144393

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    ccttcgccatcgactacctg 102
             ||||||||||||||||||||
Sbjct: 47208 ccttcgccatcgactacctg 47227
to top
>emb|AL355075.6|CNS05TC9 Human chromosome 14 DNA sequence BAC R-203M5 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 204654

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 176   ctgccgccatggccgccacc 195
             ||||||||||||||||||||
Sbjct: 58649 ctgccgccatggccgccacc 58630
to top
>emb|BX248025.1|CNSLT1I6V human full-length cDNA clone CS0DC014YA22 of Neuroblastoma of Homo
           sapiens (human)
          Length = 1629

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ctgccgccatggccgccacc 195
           ||||||||||||||||||||
Sbjct: 106 ctgccgccatggccgccacc 87
to top
>emb|BX161490.1|CNSLT1I6X human full-length cDNA clone CS0DJ006YG22 of T cells (Jurkat cell
           line) of Homo sapiens (human)
          Length = 1645

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ctgccgccatggccgccacc 195
           ||||||||||||||||||||
Sbjct: 163 ctgccgccatggccgccacc 144
to top
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 171     cacccctgccgccatggccgccac 194
               |||||||||||| |||||||||||
Sbjct: 1013868 cacccctgccgcgatggccgccac 1013845



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 171     cacccctgccgccatggccgccac 194
               |||||||||||| |||||||||||
Sbjct: 1013236 cacccctgccgcgatggccgccac 1013213



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 171     cacccctgccgccatggccgccac 194
               |||||||||||| |||||||||||
Sbjct: 1012580 cacccctgccgcgatggccgccac 1012557
to top
>emb|AL137727.1|HSM802274 Homo sapiens mRNA; cDNA DKFZp434M0519 (from clone DKFZp434M0519);
           partial cds
          Length = 3487

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ctgccgccatggccgccacc 195
           ||||||||||||||||||||
Sbjct: 86  ctgccgccatggccgccacc 67
to top
>dbj|AB050522.1| Macaca fascicularis brain cDNA, clone:QnpA-20821
          Length = 2679

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 72   cttcatcctcgccttcgcca 91
            ||||||||||||||||||||
Sbjct: 1106 cttcatcctcgccttcgcca 1125


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,207,479
Number of Sequences: 3902068
Number of extensions: 1207479
Number of successful extensions: 114853
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114339
Number of HSP's gapped (non-prelim): 504
length of query: 225
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 203
effective length of database: 17,147,199,772
effective search space: 3480881553716
effective search space used: 3480881553716
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top