ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags37g15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467648.1| Oryza sativa (japonica cultivar-group), mRNA 452 e-124
2dbj|AK121645.1| Oryza sativa (japonica cultivar-group) cDNA clon... 452 e-124
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 274 2e-70
4dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic D... 274 2e-70
5ref|NM_102303.3| Arabidopsis thaliana unknown protein AT1G24610 ... 88 3e-14
6gb|AY072532.1| Arabidopsis thaliana unknown protein mRNA, comple... 88 3e-14
7gb|AY042836.1| Arabidopsis thaliana Unknown protein mRNA, comple... 88 3e-14
8emb|BX814067.1|CNS0ADRG Arabidopsis thaliana Full-length cDNA Co... 88 3e-14
9gb|AC000103.2|AC000103 Genomic sequence for Arabidopsis thaliana... 88 3e-14
10emb|BX814480.1|CNS0ADMW Arabidopsis thaliana Full-length cDNA Co... 86 1e-13
11gb|AY088409.1| Arabidopsis thaliana clone 6503 mRNA, complete se... 80 7e-12
12gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete se... 52 0.002
13gb|AC117224.3| Mus musculus BAC clone RP23-356N8 from chromosome... 46 0.10
14gb|AC157596.5| Mus musculus BAC clone RP23-240B9 from chromosome... 46 0.10
15gb|AY627332.1| Megacopta cribraria cytochrome oxidase subunit I ... 42 1.6
16gb|AY253138.1| Pachygrontha sp. WCW-2003 cytochrome oxidase subu... 42 1.6
17emb|AL034343.17|HS108C2 Human DNA sequence from clone RP1-108C2 ... 42 1.6
18gb|AF230666.2| Homo sapiens chromosome 8 clone CTC-137K3 map 8q2... 42 1.6
19gb|AF230667.3| Homo sapiens chromosome 8 clone CTC-326J4 map 8q2... 42 1.6
20emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E ... 42 1.6
21gb|AC115040.7| Mus musculus chromosome 7, clone RP24-281E19, com... 40 6.4
22gb|AC165070.2| Phakopsora pachyrhizi clone JGIAFNA-829C10, compl... 40 6.4
23gb|AC125139.4| Mus musculus BAC clone RP24-326G1 from chromosome... 40 6.4
24emb|AL391832.10| Human DNA sequence from clone RP11-443B7 on chr... 40 6.4
25emb|AL357507.9| Human DNA sequence from clone RP11-694J20 on chr... 40 6.4
26emb|BX470173.6| Human DNA sequence from clone RP11-739C15 on chr... 40 6.4
27dbj|AK035023.1| Mus musculus 12 days embryo embryonic body betwe... 40 6.4
28gb|AC027316.3|AC027316 Homo sapiens chromosome 5 clone CTC-304C4... 40 6.4
29gb|AC013406.7| Homo sapiens BAC clone RP11-341F20 from 2, comple... 40 6.4
30emb|BX324176.11| Mouse DNA sequence from clone RP23-136N12 on ch... 40 6.4
31emb|AL928598.7| Mouse DNA sequence from clone RP23-326I20 on chr... 40 6.4
32gb|AC148919.1| Gallus gallus BAC clone CH261-43B19 from chromoso... 40 6.4
33gb|AC131591.13| Mus musculus chromosome 1, clone RP24-541A5, com... 40 6.4
34emb|AL929012.4| Mouse DNA sequence from clone RP23-477G20 on chr... 40 6.4 
>ref|XM_467648.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1649

 Score =  452 bits (228), Expect = e-124
 Identities = 398/455 (87%)
 Strand = Plus / Plus

                                                                       
Query: 23  tgcagctcgccgaccaagtacccgaggaactgtgggcaatgagactgggcttgaggttgc 82
           ||||||| || ||||||||||| |||||||| ||||| ||| |||||||||||||| |||
Sbjct: 462 tgcagctagcggaccaagtacctgaggaactatgggctatgcgactgggcttgaggctgc 521

                                                                       
Query: 83  ttcaagagaggacaaaattcgattcgttttggtggccatatatcgcgaacctgccagaga 142
           ||||||| ||| ||||||  ||||| || ||||||||||||||||| || ||||||||||
Sbjct: 522 ttcaagaaagggcaaaatctgattctttctggtggccatatatcgcaaatctgccagaga 581

                                                                       
Query: 143 cctttaccgtaccaatcttctttccaggggaagacataaagaacttgcaatatgctcctc 202
           | ||||| ||||| || || |||||||||||||||||||| |||||||| ||||| ||||
Sbjct: 582 cttttactgtaccgatattttttccaggggaagacataaaaaacttgcagtatgcccctc 641

                                                                       
Query: 203 tcctccaccagataaataaaagatgtcgtttccttctcgagtttgagaaagaggtaaaac 262
           | ||||||||| | |||||||| ||||| ||||||||||||||||| ||||| || ||||
Sbjct: 642 ttctccaccaggtgaataaaaggtgtcgcttccttctcgagtttgaaaaagaagtgaaac 701

                                                                       
Query: 263 agaagcttggcactgtgccctcaggagatcatcctttttgtggacaagatgtacactcgt 322
           | |||||||| || |||||||  | |||||||||||||||||||||||||||| |||| |
Sbjct: 702 ataagcttggtacagtgcccttggaagatcatcctttttgtggacaagatgtaaactcat 761

                                                                       
Query: 323 cctcccttggatgggctatgtccgcagcgtcttcacgagcattccgtctgcatggtgaaa 382
           | |||||||||||||||||||| ||||| ||| | || ||||||||| ||||||||||||
Sbjct: 762 cttcccttggatgggctatgtcagcagcatctactcgggcattccgtttgcatggtgaaa 821

                                                                       
Query: 383 tcccaatgttgttgccccttgttgatatgtgcaaccatagttttagcccgaatgctagga 442
           |||||||| ||||||| ||| |||||||||| ||||||||||||| ||| ||||||||||
Sbjct: 822 tcccaatgctgttgcctcttattgatatgtgtaaccatagttttaacccaaatgctagga 881

                                              
Query: 443 ttgtccaggatggagatgtcnagagccctgatatg 477
           |||||||||| ||| ||||  | ||||||||||||
Sbjct: 882 ttgtccaggaaggaaatgtggatagccctgatatg 916
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>dbj|AK121645.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058C09, full
           insert sequence
          Length = 1649

 Score =  452 bits (228), Expect = e-124
 Identities = 398/455 (87%)
 Strand = Plus / Plus

                                                                       
Query: 23  tgcagctcgccgaccaagtacccgaggaactgtgggcaatgagactgggcttgaggttgc 82
           ||||||| || ||||||||||| |||||||| ||||| ||| |||||||||||||| |||
Sbjct: 462 tgcagctagcggaccaagtacctgaggaactatgggctatgcgactgggcttgaggctgc 521

                                                                       
Query: 83  ttcaagagaggacaaaattcgattcgttttggtggccatatatcgcgaacctgccagaga 142
           ||||||| ||| ||||||  ||||| || ||||||||||||||||| || ||||||||||
Sbjct: 522 ttcaagaaagggcaaaatctgattctttctggtggccatatatcgcaaatctgccagaga 581

                                                                       
Query: 143 cctttaccgtaccaatcttctttccaggggaagacataaagaacttgcaatatgctcctc 202
           | ||||| ||||| || || |||||||||||||||||||| |||||||| ||||| ||||
Sbjct: 582 cttttactgtaccgatattttttccaggggaagacataaaaaacttgcagtatgcccctc 641

                                                                       
Query: 203 tcctccaccagataaataaaagatgtcgtttccttctcgagtttgagaaagaggtaaaac 262
           | ||||||||| | |||||||| ||||| ||||||||||||||||| ||||| || ||||
Sbjct: 642 ttctccaccaggtgaataaaaggtgtcgcttccttctcgagtttgaaaaagaagtgaaac 701

                                                                       
Query: 263 agaagcttggcactgtgccctcaggagatcatcctttttgtggacaagatgtacactcgt 322
           | |||||||| || |||||||  | |||||||||||||||||||||||||||| |||| |
Sbjct: 702 ataagcttggtacagtgcccttggaagatcatcctttttgtggacaagatgtaaactcat 761

                                                                       
Query: 323 cctcccttggatgggctatgtccgcagcgtcttcacgagcattccgtctgcatggtgaaa 382
           | |||||||||||||||||||| ||||| ||| | || ||||||||| ||||||||||||
Sbjct: 762 cttcccttggatgggctatgtcagcagcatctactcgggcattccgtttgcatggtgaaa 821

                                                                       
Query: 383 tcccaatgttgttgccccttgttgatatgtgcaaccatagttttagcccgaatgctagga 442
           |||||||| ||||||| ||| |||||||||| ||||||||||||| ||| ||||||||||
Sbjct: 822 tcccaatgctgttgcctcttattgatatgtgtaaccatagttttaacccaaatgctagga 881

                                              
Query: 443 ttgtccaggatggagatgtcnagagccctgatatg 477
           |||||||||| ||| ||||  | ||||||||||||
Sbjct: 882 ttgtccaggaaggaaatgtggatagccctgatatg 916
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  274 bits (138), Expect = 2e-70
 Identities = 230/261 (88%)
 Strand = Plus / Plus

                                                                            
Query: 217      aataaaagatgtcgtttccttctcgagtttgagaaagaggtaaaacagaagcttggcact 276
                |||||||| ||||| ||||||||||||||||| ||||| || ||||| |||||||| || 
Sbjct: 30613291 aataaaaggtgtcgcttccttctcgagtttgaaaaagaagtgaaacataagcttggtaca 30613350

                                                                            
Query: 277      gtgccctcaggagatcatcctttttgtggacaagatgtacactcgtcctcccttggatgg 336
                |||||||  | |||||||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 30613351 gtgcccttggaagatcatcctttttgtggacaagatgtaaactcatcttcccttggatgg 30613410

                                                                            
Query: 337      gctatgtccgcagcgtcttcacgagcattccgtctgcatggtgaaatcccaatgttgttg 396
                |||||||| ||||| ||| | || ||||||||| |||||||||||||||||||| |||||
Sbjct: 30613411 gctatgtcagcagcatctactcgggcattccgtttgcatggtgaaatcccaatgctgttg 30613470

                                                                            
Query: 397      ccccttgttgatatgtgcaaccatagttttagcccgaatgctaggattgtccaggatgga 456
                || ||| |||||||||| ||||||||||||| ||| |||||||||||||||||||| |||
Sbjct: 30613471 cctcttattgatatgtgtaaccatagttttaacccaaatgctaggattgtccaggaagga 30613530

                                     
Query: 457      gatgtcnagagccctgatatg 477
                 ||||  | ||||||||||||
Sbjct: 30613531 aatgtggatagccctgatatg 30613551



 Score =  167 bits (84), Expect = 4e-38
 Identities = 147/168 (87%)
 Strand = Plus / Plus

                                                                            
Query: 46       gaggaactgtgggcaatgagactgggcttgaggttgcttcaagagaggacaaaattcgat 105
                |||||||| ||||| ||| |||||||||||||| |||||||||| ||| ||||||  |||
Sbjct: 30613054 gaggaactatgggctatgcgactgggcttgaggctgcttcaagaaagggcaaaatctgat 30613113

                                                                            
Query: 106      tcgttttggtggccatatatcgcgaacctgccagagacctttaccgtaccaatcttcttt 165
                || || ||||||||||||||||| || ||||||||||| ||||| ||||| || || |||
Sbjct: 30613114 tctttctggtggccatatatcgcaaatctgccagagacttttactgtaccgatatttttt 30613173

                                                                
Query: 166      ccaggggaagacataaagaacttgcaatatgctcctctcctccaccag 213
                ||||||||||||||||| |||||||| ||||| ||||| |||||||||
Sbjct: 30613174 ccaggggaagacataaaaaacttgcagtatgcccctcttctccaccag 30613221
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>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0643A10
          Length = 187931

 Score =  274 bits (138), Expect = 2e-70
 Identities = 230/261 (88%)
 Strand = Plus / Plus

                                                                          
Query: 217    aataaaagatgtcgtttccttctcgagtttgagaaagaggtaaaacagaagcttggcact 276
              |||||||| ||||| ||||||||||||||||| ||||| || ||||| |||||||| || 
Sbjct: 125299 aataaaaggtgtcgcttccttctcgagtttgaaaaagaagtgaaacataagcttggtaca 125358

                                                                          
Query: 277    gtgccctcaggagatcatcctttttgtggacaagatgtacactcgtcctcccttggatgg 336
              |||||||  | |||||||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 125359 gtgcccttggaagatcatcctttttgtggacaagatgtaaactcatcttcccttggatgg 125418

                                                                          
Query: 337    gctatgtccgcagcgtcttcacgagcattccgtctgcatggtgaaatcccaatgttgttg 396
              |||||||| ||||| ||| | || ||||||||| |||||||||||||||||||| |||||
Sbjct: 125419 gctatgtcagcagcatctactcgggcattccgtttgcatggtgaaatcccaatgctgttg 125478

                                                                          
Query: 397    ccccttgttgatatgtgcaaccatagttttagcccgaatgctaggattgtccaggatgga 456
              || ||| |||||||||| ||||||||||||| ||| |||||||||||||||||||| |||
Sbjct: 125479 cctcttattgatatgtgtaaccatagttttaacccaaatgctaggattgtccaggaagga 125538

                                   
Query: 457    gatgtcnagagccctgatatg 477
               ||||  | ||||||||||||
Sbjct: 125539 aatgtggatagccctgatatg 125559



 Score =  167 bits (84), Expect = 4e-38
 Identities = 147/168 (87%)
 Strand = Plus / Plus

                                                                          
Query: 46     gaggaactgtgggcaatgagactgggcttgaggttgcttcaagagaggacaaaattcgat 105
              |||||||| ||||| ||| |||||||||||||| |||||||||| ||| ||||||  |||
Sbjct: 125062 gaggaactatgggctatgcgactgggcttgaggctgcttcaagaaagggcaaaatctgat 125121

                                                                          
Query: 106    tcgttttggtggccatatatcgcgaacctgccagagacctttaccgtaccaatcttcttt 165
              || || ||||||||||||||||| || ||||||||||| ||||| ||||| || || |||
Sbjct: 125122 tctttctggtggccatatatcgcaaatctgccagagacttttactgtaccgatatttttt 125181

                                                              
Query: 166    ccaggggaagacataaagaacttgcaatatgctcctctcctccaccag 213
              ||||||||||||||||| |||||||| ||||| ||||| |||||||||
Sbjct: 125182 ccaggggaagacataaaaaacttgcagtatgcccctcttctccaccag 125229
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>ref|NM_102303.3| Arabidopsis thaliana unknown protein AT1G24610 mRNA, complete cds
          Length = 2181

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 83/96 (86%)
 Strand = Plus / Plus

                                                                       
Query: 160 ttctttccaggggaagacataaagaacttgcaatatgctcctctcctccaccagataaat 219
           |||||||| || ||||| || || |||||||||||||||||||| ||||||||| | || 
Sbjct: 471 ttctttcccggagaagatatcaaaaacttgcaatatgctcctcttctccaccaggtcaac 530

                                               
Query: 220 aaaagatgtcgtttccttctcgagtttgagaaagag 255
           |||||||| ||||| ||||| ||||||||| |||||
Sbjct: 531 aaaagatgccgttttcttcttgagtttgagcaagag 566



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 49  gaactgtgggcaatgagactgggcttgaggttg 81
           |||||||||||||||| | |||| |||||||||
Sbjct: 360 gaactgtgggcaatgaaattgggattgaggttg 392
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>gb|AY072532.1| Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 1151

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 83/96 (86%)
 Strand = Plus / Plus

                                                                       
Query: 160 ttctttccaggggaagacataaagaacttgcaatatgctcctctcctccaccagataaat 219
           |||||||| || ||||| || || |||||||||||||||||||| ||||||||| | || 
Sbjct: 100 ttctttcccggagaagatatcaaaaacttgcaatatgctcctcttctccaccaggtcaac 159

                                               
Query: 220 aaaagatgtcgtttccttctcgagtttgagaaagag 255
           |||||||| ||||| ||||| ||||||||| |||||
Sbjct: 160 aaaagatgccgttttcttcttgagtttgagcaagag 195
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>gb|AY042836.1| Arabidopsis thaliana Unknown protein mRNA, complete cds
          Length = 1649

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 83/96 (86%)
 Strand = Plus / Plus

                                                                       
Query: 160 ttctttccaggggaagacataaagaacttgcaatatgctcctctcctccaccagataaat 219
           |||||||| || ||||| || || |||||||||||||||||||| ||||||||| | || 
Sbjct: 401 ttctttcccggagaagatatcaaaaacttgcaatatgctcctcttctccaccaggtcaac 460

                                               
Query: 220 aaaagatgtcgtttccttctcgagtttgagaaagag 255
           |||||||| ||||| ||||| ||||||||| |||||
Sbjct: 461 aaaagatgccgttttcttcttgagtttgagcaagag 496



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 49  gaactgtgggcaatgagactgggcttgaggttg 81
           |||||||||||||||| | |||| |||||||||
Sbjct: 290 gaactgtgggcaatgaaattgggattgaggttg 322
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>emb|BX814067.1|CNS0ADRG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB55ZB07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1563

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 83/96 (86%)
 Strand = Plus / Plus

                                                                       
Query: 160 ttctttccaggggaagacataaagaacttgcaatatgctcctctcctccaccagataaat 219
           |||||||| || ||||| || || |||||||||||||||||||| ||||||||| | || 
Sbjct: 456 ttctttcccggagaagatatcaaaaacttgcaatatgctcctcttctccaccaggtcaac 515

                                               
Query: 220 aaaagatgtcgtttccttctcgagtttgagaaagag 255
           |||||||| ||||| ||||| ||||||||| |||||
Sbjct: 516 aaaagatgccgttttcttcttgagtttgagcaagag 551



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 49  gaactgtgggcaatgagactgggcttgaggttg 81
           |||||||||||||||| | |||| |||||||||
Sbjct: 345 gaactgtgggcaatgaaattgggattgaggttg 377
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>gb|AC000103.2|AC000103 Genomic sequence for Arabidopsis thaliana BAC F21J9 from chromosome I,
             complete sequence
          Length = 99392

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                         
Query: 160   ttctttccaggggaagacataaagaacttgcaatatgctcctctcctccaccagataaat 219
             |||||||| || ||||| || || |||||||||||||||||||| ||||||||| | || 
Sbjct: 82905 ttctttcccggagaagatatcaaaaacttgcaatatgctcctcttctccaccaggtcaac 82846

                                                 
Query: 220   aaaagatgtcgtttccttctcgagtttgagaaagag 255
             |||||||| ||||| ||||| ||||||||| |||||
Sbjct: 82845 aaaagatgccgttttcttcttgagtttgagcaagag 82810



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 49    gaactgtgggcaatgagactgggcttgaggttg 81
             |||||||||||||||| | |||| |||||||||
Sbjct: 83016 gaactgtgggcaatgaaattgggattgaggttg 82984
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>emb|BX814480.1|CNS0ADMW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB76ZC06 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1502

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                       
Query: 160 ttctttccaggggaagacataaagaacttgcaatatgctcctctcctccaccagataaat 219
           |||||||| || ||||| || || |||||||||||||||||||| ||||||||| | || 
Sbjct: 454 ttctttcccggagaagatatcaaaaacttgcaatatgctcctcttctccaccaggtcaac 513

                                              
Query: 220 aaaagatgtcgtttccttctcgagtttgagaaaga 254
           |||||||| ||||| ||||| ||||||||| ||||
Sbjct: 514 aaaagatgccgttttcttcttgagtttgagcaaga 548



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 49  gaactgtgggcaatgagactgggcttgaggttg 81
           |||||||||||||||| | |||| |||||||||
Sbjct: 343 gaactgtgggcaatgaaattgggattgaggttg 375
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>gb|AY088409.1| Arabidopsis thaliana clone 6503 mRNA, complete sequence
          Length = 1599

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 82/96 (85%)
 Strand = Plus / Plus

                                                                       
Query: 160 ttctttccaggggaagacataaagaacttgcaatatgctcctctcctccaccagataaat 219
           |||||||| || ||||| || || |||||||||||||||||||| ||||||||| | || 
Sbjct: 471 ttctttcccggagaagatatcaaaaacttgcaatatgctcctcttctccaccaggtcaac 530

                                               
Query: 220 aaaagatgtcgtttccttctcgagtttgagaaagag 255
           |||| ||| ||||| ||||| ||||||||| |||||
Sbjct: 531 aaaatatgccgttttcttcttgagtttgagcaagag 566



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 49  gaactgtgggcaatgagactgggcttgaggttg 81
           |||||||||||||||| | |||| |||||||||
Sbjct: 360 gaactgtgggcaatgaaattgggattgaggttg 392
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>gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete sequence
          Length = 120870

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                       
Query: 160   ttctttccaggggaagacataaagaacttgcaatatgctcct 201
             |||||||| ||||||||||| ||||| ||||| |||||||||
Sbjct: 86986 ttctttcctggggaagacatcaagaatttgcagtatgctcct 86945
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>gb|AC117224.3| Mus musculus BAC clone RP23-356N8 from chromosome 16, complete sequence
          Length = 197831

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 256   gtaaaacagaagcttggcactgt 278
             |||||||||||||||||||||||
Sbjct: 23916 gtaaaacagaagcttggcactgt 23894
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>gb|AC157596.5| Mus musculus BAC clone RP23-240B9 from chromosome 16, complete sequence
          Length = 204275

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 256   gtaaaacagaagcttggcactgt 278
             |||||||||||||||||||||||
Sbjct: 94719 gtaaaacagaagcttggcactgt 94741
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>gb|AY627332.1| Megacopta cribraria cytochrome oxidase subunit I (COI) gene,
           partial cds; mitochondrial
          Length = 789

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 248 agaaagaggtaaaacagaagc 268
           |||||||||||||||||||||
Sbjct: 30  agaaagaggtaaaacagaagc 50
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>gb|AY253138.1| Pachygrontha sp. WCW-2003 cytochrome oxidase subunit I gene,
           partial cds; mitochondrial
          Length = 1086

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 248 agaaagaggtaaaacagaagc 268
           |||||||||||||||||||||
Sbjct: 741 agaaagaggtaaaacagaagc 761
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>emb|AL034343.17|HS108C2 Human DNA sequence from clone RP1-108C2 on chromosome 6p12.1-21.1
             Contains the MCM3 gene for MCM3 minichromosome maintenance
             deficient 3 (S. cerevisiae), a CACT
             (carnitine/acylcarnitine translocase) pseudogene, the
             IL17F gene for interleukin 17F (ML1 ML-1) and a CpG
             island, complete sequence
          Length = 130904

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 79    ttgcttcaagagaggacaaaa 99
             |||||||||||||||||||||
Sbjct: 48335 ttgcttcaagagaggacaaaa 48315
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>gb|AF230666.2| Homo sapiens chromosome 8 clone CTC-137K3 map 8q24.3, complete sequence
          Length = 86867

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 258   aaaacagaagcttggcactgtgccc 282
             ||||||||||||||||||| |||||
Sbjct: 66376 aaaacagaagcttggcactttgccc 66352
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>gb|AF230667.3| Homo sapiens chromosome 8 clone CTC-326J4 map 8q24.3, complete
            sequence
          Length = 97168

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 258  aaaacagaagcttggcactgtgccc 282
            ||||||||||||||||||| |||||
Sbjct: 3367 aaaacagaagcttggcactttgccc 3343
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>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5)
          Length = 2199546

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 241     gagtttgagaaagaggtaaaa 261
               |||||||||||||||||||||
Sbjct: 1802567 gagtttgagaaagaggtaaaa 1802587
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>gb|AC115040.7| Mus musculus chromosome 7, clone RP24-281E19, complete sequence
          Length = 172117

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    gaggaactgtgggcaatgag 65
             ||||||||||||||||||||
Sbjct: 65521 gaggaactgtgggcaatgag 65540
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>gb|AC165070.2| Phakopsora pachyrhizi clone JGIAFNA-829C10, complete sequence
          Length = 26958

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 173  aagacataaagaacttgcaatatgctcc 200
            ||||||||||| ||||| ||||||||||
Sbjct: 4376 aagacataaaggacttggaatatgctcc 4349
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>gb|AC125139.4| Mus musculus BAC clone RP24-326G1 from chromosome 1, complete sequence
          Length = 149229

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    aactgtgggcaatgagactg 69
             ||||||||||||||||||||
Sbjct: 23658 aactgtgggcaatgagactg 23677
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>emb|AL391832.10| Human DNA sequence from clone RP11-443B7 on chromosome 1 Contains two
              novel genes (LOC284527), complete sequence
          Length = 144648

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    cagaagcttggcactgtgcc 281
              ||||||||||||||||||||
Sbjct: 130513 cagaagcttggcactgtgcc 130532
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>emb|AL357507.9| Human DNA sequence from clone RP11-694J20 on chromosome 6 Contains a
             CpG island, complete sequence
          Length = 178828

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   tgctcctctcctccaccaga 214
             ||||||||||||||||||||
Sbjct: 13652 tgctcctctcctccaccaga 13633
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>emb|BX470173.6| Human DNA sequence from clone RP11-739C15 on chromosome 1, complete
             sequence
          Length = 66303

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   cagaagcttggcactgtgcc 281
             ||||||||||||||||||||
Sbjct: 13093 cagaagcttggcactgtgcc 13112
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>dbj|AK035023.1| Mus musculus 12 days embryo embryonic body between diaphragm region
           and neck cDNA, RIKEN full-length enriched library,
           clone:9430074M08 product:unclassifiable, full insert
           sequence
          Length = 2845

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 50  aactgtgggcaatgagactg 69
           ||||||||||||||||||||
Sbjct: 554 aactgtgggcaatgagactg 573
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>gb|AC027316.3|AC027316 Homo sapiens chromosome 5 clone CTC-304C4, complete sequence
          Length = 112361

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 182   agaacttgcaatatgctcctctcc 205
             |||||| |||||||||||||||||
Sbjct: 17058 agaactagcaatatgctcctctcc 17081
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>gb|AC013406.7| Homo sapiens BAC clone RP11-341F20 from 2, complete sequence
          Length = 190018

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 180    aaagaacttgcaatatgctc 199
              ||||||||||||||||||||
Sbjct: 121850 aaagaacttgcaatatgctc 121869
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>emb|BX324176.11| Mouse DNA sequence from clone RP23-136N12 on chromosome X, complete
             sequence
          Length = 81593

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   ctcctccaccagataaataa 221
             ||||||||||||||||||||
Sbjct: 39591 ctcctccaccagataaataa 39610
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>emb|AL928598.7| Mouse DNA sequence from clone RP23-326I20 on chromosome 2, complete
             sequence
          Length = 148583

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   agtttgagaaagaggtaaaa 261
             ||||||||||||||||||||
Sbjct: 57922 agtttgagaaagaggtaaaa 57903
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>gb|AC148919.1| Gallus gallus BAC clone CH261-43B19 from chromosome unknown,
           complete sequence
          Length = 163278

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 371 tgcatggtgaaatcccaatgttgt 394
           ||||||||||| ||||||||||||
Sbjct: 274 tgcatggtgaattcccaatgttgt 297
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>gb|AC131591.13| Mus musculus chromosome 1, clone RP24-541A5, complete sequence
          Length = 175644

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 50   aactgtgggcaatgagactg 69
            ||||||||||||||||||||
Sbjct: 3082 aactgtgggcaatgagactg 3063
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>emb|AL929012.4| Mouse DNA sequence from clone RP23-477G20 on chromosome 2, complete
             sequence
          Length = 201304

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 256   gtaaaacagaagcttggcactgtg 279
             |||||||||||||| |||||||||
Sbjct: 53020 gtaaaacagaagctaggcactgtg 53043


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,044,423
Number of Sequences: 3902068
Number of extensions: 4044423
Number of successful extensions: 84493
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84398
Number of HSP's gapped (non-prelim): 95
length of query: 477
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 455
effective length of database: 17,147,199,772
effective search space: 7801975896260
effective search space used: 7801975896260
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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