ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags37g12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_465561.1| Oryza sativa (japonica cultivar-group), mRNA 341 1e-90
2dbj|AK066401.1| Oryza sativa (japonica cultivar-group) cDNA clon... 341 1e-90
3dbj|AK061709.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 2e-55
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 139 8e-30
5dbj|AP004131.3| Oryza sativa (japonica cultivar-group) genomic D... 139 8e-30
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 131 2e-27
7gb|AC091302.5| Oryza sativa chromosome 3 BAC OSJNBb0015I21 genom... 131 2e-27
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
9gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B... 131 2e-27
10ref|NM_125195.3| Arabidopsis thaliana unknown protein AT5G58100 ... 64 4e-07
11dbj|AB024029.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 64 4e-07
12emb|CR936324.2| Medicago truncatula chromosome 5 clone mth2-62a2... 50 0.006
13emb|CR962121.2| Medicago truncatula chromosome 5 clone mte1-77f5... 50 0.006
14gb|AC115063.8| Mus musculus chromosome 1, clone RP24-400H18, com... 42 1.3
15gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
16gb|AC120987.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
17gb|AC138401.9| Mus musculus chromosome 13, clone RP24-79G5, comp... 42 1.3
18gb|AC117599.14| Mus musculus chromosome 1, clone RP23-426D21, co... 42 1.3
19gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
20dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138 42 1.3
21gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, c... 42 1.3
22dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
23dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
24gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
25emb|AL807392.7| Mouse DNA sequence from clone RP23-104D24 on chr... 42 1.3
26ref|NM_123491.2| Arabidopsis thaliana ATP binding / kinase/ prot... 40 5.3
27gb|DP000017.1| Sus scrofa target 1 genomic scaffold 40 5.3
28gb|AC087160.2| Sus scrofa clone RP44-418J7, complete sequence 40 5.3
29emb|AL357712.10| Human DNA sequence from clone GS1-756B1 on chro... 40 5.3
30emb|AL035604.16|HS38C16 Human DNA sequence from clone RP1-38C16 ... 40 5.3
31gb|AC142236.2| Homo sapiens fosmid clone XXFOS-80445G4 from 7, c... 40 5.3
32gb|DQ067599.1| Coffea canephora phenylalanine ammonia-lyase (PAL... 40 5.3
33emb|CR550304.13| Zebrafish DNA sequence from clone CH211-150I13 ... 40 5.3
34emb|BX548160.13| Zebrafish DNA sequence from clone DKEY-25G11 in... 40 5.3
35emb|BX890597.13| Zebrafish DNA sequence from clone DKEY-65F8, co... 40 5.3
36dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103 40 5.3
37ref|XM_679263.1| PREDICTED: Danio rerio similar to polyprotein (... 40 5.3
38emb|BX511229.6| Zebrafish DNA sequence from clone CH211-194H2 in... 40 5.3
39gb|AF321227.1|AF321227 Tribolium castaneum Ftz (ftz), Scr (scr),... 40 5.3
40emb|BX832626.1|CNS09YPT Arabidopsis thaliana Full-length cDNA Co... 40 5.3
41dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome 40 5.3
42emb|AL935129.25| Mouse DNA sequence from clone RP23-181O3 on chr... 40 5.3
43dbj|AB019225.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 5.3
44dbj|AK117571.1| Arabidopsis thaliana At5g41260 mRNA for putative... 40 5.3
45emb|BX072569.6| Zebrafish DNA sequence from clone CH211-184B9 in... 40 5.3 
>ref|XM_465561.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3440

 Score =  341 bits (172), Expect = 1e-90
 Identities = 327/379 (86%)
 Strand = Plus / Plus

                                                                        
Query: 19   tacaagatacaatcagagaaagattttcttctgttggcgaggattaccatgccgtggata 78
            ||||||||||||||||||| ||||| || ||| |||||||| |||||||||| || ||||
Sbjct: 1479 tacaagatacaatcagagagagattctcatcttttggcgagaattaccatgcagtagata 1538

                                                                        
Query: 79   tcctattggcagagattgatgtatatgaactttttgctttcaagcattgcatgaaaagaa 138
            ||||||||||||||||||||||||| ||||||||||| |||||||||||  |   |||||
Sbjct: 1539 tcctattggcagagattgatgtatacgaactttttgccttcaagcattgtgttggaagaa 1598

                                                                        
Query: 139  agatacaacttgccctttgcaaagaactcgatcagagaatgcacgagctgaaaaatgaac 198
             | |||| |||||||||||||||||||| ||| |||||||||| || ||||||| |||||
Sbjct: 1599 gggtacagcttgccctttgcaaagaacttgatgagagaatgcatgatctgaaaagtgaac 1658

                                                                        
Query: 199  tcgagggataccatagtggagattctgancaaattaataagaagaaagctcttgatgcat 258
            | ||||| ||| ||| ||||||||| ||  | ||||||||||||||||||||||||||||
Sbjct: 1659 tggagggttacaatactggagattcggatgatattaataagaagaaagctcttgatgcat 1718

                                                                        
Query: 259  tgaagaggatggaaaaatggaacttgtttaaagatacctctgaggaacatcatagttaca 318
            |||| ||||||||||| |||||||| |||||||||    | |||||||||||||||||||
Sbjct: 1719 tgaataggatggaaaagtggaacttatttaaagatgttccagaggaacatcatagttaca 1778

                                                                        
Query: 319  cagtggctcgtgattcatttcttgcacacttagggtcaacattatggggctctatgaggc 378
            | |||||||| |||||||| || |||||| | || ||    |||||||| |||||||| |
Sbjct: 1779 ctgtggctcgcgattcattcctcgcacaccttggttccgtgttatggggttctatgagtc 1838

                               
Query: 379  atgtaattgctccatctgt 397
            ||||||||||||| |||||
Sbjct: 1839 atgtaattgctccttctgt 1857
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>dbj|AK066401.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063N21, full
            insert sequence
          Length = 3439

 Score =  341 bits (172), Expect = 1e-90
 Identities = 327/379 (86%)
 Strand = Plus / Plus

                                                                        
Query: 19   tacaagatacaatcagagaaagattttcttctgttggcgaggattaccatgccgtggata 78
            ||||||||||||||||||| ||||| || ||| |||||||| |||||||||| || ||||
Sbjct: 1478 tacaagatacaatcagagagagattctcatcttttggcgagaattaccatgcagtagata 1537

                                                                        
Query: 79   tcctattggcagagattgatgtatatgaactttttgctttcaagcattgcatgaaaagaa 138
            ||||||||||||||||||||||||| ||||||||||| |||||||||||  |   |||||
Sbjct: 1538 tcctattggcagagattgatgtatacgaactttttgccttcaagcattgtgttggaagaa 1597

                                                                        
Query: 139  agatacaacttgccctttgcaaagaactcgatcagagaatgcacgagctgaaaaatgaac 198
             | |||| |||||||||||||||||||| ||| |||||||||| || ||||||| |||||
Sbjct: 1598 gggtacagcttgccctttgcaaagaacttgatgagagaatgcatgatctgaaaagtgaac 1657

                                                                        
Query: 199  tcgagggataccatagtggagattctgancaaattaataagaagaaagctcttgatgcat 258
            | ||||| ||| ||| ||||||||| ||  | ||||||||||||||||||||||||||||
Sbjct: 1658 tggagggttacaatactggagattcggatgatattaataagaagaaagctcttgatgcat 1717

                                                                        
Query: 259  tgaagaggatggaaaaatggaacttgtttaaagatacctctgaggaacatcatagttaca 318
            |||| ||||||||||| |||||||| |||||||||    | |||||||||||||||||||
Sbjct: 1718 tgaataggatggaaaagtggaacttatttaaagatgttccagaggaacatcatagttaca 1777

                                                                        
Query: 319  cagtggctcgtgattcatttcttgcacacttagggtcaacattatggggctctatgaggc 378
            | |||||||| |||||||| || |||||| | || ||    |||||||| |||||||| |
Sbjct: 1778 ctgtggctcgcgattcattcctcgcacaccttggttccgtgttatggggttctatgagtc 1837

                               
Query: 379  atgtaattgctccatctgt 397
            ||||||||||||| |||||
Sbjct: 1838 atgtaattgctccttctgt 1856
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>dbj|AK061709.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F12, full
           insert sequence
          Length = 1824

 Score =  224 bits (113), Expect = 2e-55
 Identities = 220/256 (85%)
 Strand = Plus / Plus

                                                                       
Query: 142 tacaacttgccctttgcaaagaactcgatcagagaatgcacgagctgaaaaatgaactcg 201
           |||| |||||||||||||||||||| ||| |||||||||| || ||||||| |||||| |
Sbjct: 26  tacagcttgccctttgcaaagaacttgatgagagaatgcatgatctgaaaagtgaactgg 85

                                                                       
Query: 202 agggataccatagtggagattctgancaaattaataagaagaaagctcttgatgcattga 261
           |||| ||| ||| ||||||||| ||  | |||||||||||||||||||||||||||||||
Sbjct: 86  agggttacaatactggagattcggatgatattaataagaagaaagctcttgatgcattga 145

                                                                       
Query: 262 agaggatggaaaaatggaacttgtttaaagatacctctgaggaacatcatagttacacag 321
           | ||||||||||| |||||||| |||||||||    | |||||||||||||||||||| |
Sbjct: 146 ataggatggaaaagtggaacttatttaaagatgttccagaggaacatcatagttacactg 205

                                                                       
Query: 322 tggctcgtgattcatttcttgcacacttagggtcaacattatggggctctatgaggcatg 381
           ||||||| |||||||| || |||||| | || ||    |||||||| |||||||| ||||
Sbjct: 206 tggctcgcgattcattcctcgcacaccttggttccgtgttatggggttctatgagtcatg 265

                           
Query: 382 taattgctccatctgt 397
           |||||||||| |||||
Sbjct: 266 taattgctccttctgt 281
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  139 bits (70), Expect = 8e-30
 Identities = 117/133 (87%)
 Strand = Plus / Plus

                                                                            
Query: 161      agaactcgatcagagaatgcacgagctgaaaaatgaactcgagggataccatagtggaga 220
                |||||| ||| |||||||||| || ||||||| |||||| ||||| ||| ||| ||||||
Sbjct: 15948187 agaacttgatgagagaatgcatgatctgaaaagtgaactggagggttacaatactggaga 15948246

                                                                            
Query: 221      ttctgancaaattaataagaagaaagctcttgatgcattgaagaggatggaaaaatggaa 280
                ||| ||  | |||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 15948247 ttcggatgatattaataagaagaaagctcttgatgcattgaataggatggaaaagtggaa 15948306

                             
Query: 281      cttgtttaaagat 293
                ||| |||||||||
Sbjct: 15948307 cttatttaaagat 15948319



 Score =  107 bits (54), Expect = 3e-20
 Identities = 90/102 (88%)
 Strand = Plus / Plus

                                                                            
Query: 61       attaccatgccgtggatatcctattggcagagattgatgtatatgaactttttgctttca 120
                |||||||||| || ||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 15947716 attaccatgcagtagatatcctattggcagagattgatgtatacgaactttttgccttca 15947775

                                                          
Query: 121      agcattgcatgaaaagaaagatacaacttgccctttgcaaag 162
                |||||||  |   ||||| | |||| ||||||||||||||||
Sbjct: 15947776 agcattgtgttggaagaagggtacagcttgccctttgcaaag 15947817



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                            
Query: 301      aggaacatcatagttacacagtggctcgtgattcatttcttgcacacttagggtcaacat 360
                ||||||||||||||||||| |||||||| |||||||| || |||||| | || ||    |
Sbjct: 15948533 aggaacatcatagttacactgtggctcgcgattcattcctcgcacaccttggttccgtgt 15948592

                                                     
Query: 361      tatggggctctatgaggcatgtaattgctccatctgt 397
                ||||||| |||||||| |||||||||||||| |||||
Sbjct: 15948593 tatggggttctatgagtcatgtaattgctccttctgt 15948629



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                          
Query: 19       tacaagatacaatcagagaaagattttcttctgttggcgagg 60
                ||||||||||||||||||| ||||| || ||| |||||||||
Sbjct: 15947098 tacaagatacaatcagagagagattctcatcttttggcgagg 15947139
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>dbj|AP004131.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1057_F01
          Length = 120026

 Score =  139 bits (70), Expect = 8e-30
 Identities = 117/133 (87%)
 Strand = Plus / Plus

                                                                         
Query: 161   agaactcgatcagagaatgcacgagctgaaaaatgaactcgagggataccatagtggaga 220
             |||||| ||| |||||||||| || ||||||| |||||| ||||| ||| ||| ||||||
Sbjct: 91862 agaacttgatgagagaatgcatgatctgaaaagtgaactggagggttacaatactggaga 91921

                                                                         
Query: 221   ttctgancaaattaataagaagaaagctcttgatgcattgaagaggatggaaaaatggaa 280
             ||| ||  | |||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 91922 ttcggatgatattaataagaagaaagctcttgatgcattgaataggatggaaaagtggaa 91981

                          
Query: 281   cttgtttaaagat 293
             ||| |||||||||
Sbjct: 91982 cttatttaaagat 91994



 Score =  107 bits (54), Expect = 3e-20
 Identities = 90/102 (88%)
 Strand = Plus / Plus

                                                                         
Query: 61    attaccatgccgtggatatcctattggcagagattgatgtatatgaactttttgctttca 120
             |||||||||| || ||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 91391 attaccatgcagtagatatcctattggcagagattgatgtatacgaactttttgccttca 91450

                                                       
Query: 121   agcattgcatgaaaagaaagatacaacttgccctttgcaaag 162
             |||||||  |   ||||| | |||| ||||||||||||||||
Sbjct: 91451 agcattgtgttggaagaagggtacagcttgccctttgcaaag 91492



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                         
Query: 301   aggaacatcatagttacacagtggctcgtgattcatttcttgcacacttagggtcaacat 360
             ||||||||||||||||||| |||||||| |||||||| || |||||| | || ||    |
Sbjct: 92208 aggaacatcatagttacactgtggctcgcgattcattcctcgcacaccttggttccgtgt 92267

                                                  
Query: 361   tatggggctctatgaggcatgtaattgctccatctgt 397
             ||||||| |||||||| |||||||||||||| |||||
Sbjct: 92268 tatggggttctatgagtcatgtaattgctccttctgt 92304



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 19    tacaagatacaatcagagaaagattttcttctgttggcgagg 60
             ||||||||||||||||||| ||||| || ||| |||||||||
Sbjct: 90773 tacaagatacaatcagagagagattctcatcttttggcgagg 90814
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  131 bits (66), Expect = 2e-27
 Identities = 116/133 (87%)
 Strand = Plus / Minus

                                                                            
Query: 161      agaactcgatcagagaatgcacgagctgaaaaatgaactcgagggataccatagtggaga 220
                |||||| ||| |||||| ||| || ||||||| |||||| ||||| ||| ||| ||||||
Sbjct: 20488830 agaacttgatgagagaaggcatgatctgaaaagtgaactggagggttacaatactggaga 20488771

                                                                            
Query: 221      ttctgancaaattaataagaagaaagctcttgatgcattgaagaggatggaaaaatggaa 280
                ||| ||  | |||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 20488770 ttcggatgatattaataagaagaaagctcttgatgcattgaataggatggaaaagtggaa 20488711

                             
Query: 281      cttgtttaaagat 293
                ||| |||||||||
Sbjct: 20488710 cttatttaaagat 20488698



 Score =  107 bits (54), Expect = 3e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                            
Query: 61       attaccatgccgtggatatcctattggcagagattgatgtatatgaactttttgctttca 120
                |||||||||| || ||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 20489294 attaccatgcagtagatatcctattggcagagattgatgtatacgaactttttgccttca 20489235

                                                          
Query: 121      agcattgcatgaaaagaaagatacaacttgccctttgcaaag 162
                |||||||  |   ||||| | |||| ||||||||||||||||
Sbjct: 20489234 agcattgtgttggaagaagggtacagcttgccctttgcaaag 20489193



 Score =  105 bits (53), Expect = 1e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                            
Query: 301      aggaacatcatagttacacagtggctcgtgattcatttcttgcacacttagggtcaacat 360
                ||||||||||||||||||| ||||||||||||||||| || |||||| | || ||    |
Sbjct: 20488477 aggaacatcatagttacactgtggctcgtgattcattcctcgcacaccttggttccgtgt 20488418

                                                     
Query: 361      tatggggctctatgaggcatgtaattgctccatctgt 397
                ||||||||||||||||||||||||||||||| |||||
Sbjct: 20488417 tatggggctctatgaggcatgtaattgctccttctgt 20488381
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>gb|AC091302.5| Oryza sativa chromosome 3 BAC OSJNBb0015I21 genomic sequence,
            complete sequence
          Length = 101073

 Score =  131 bits (66), Expect = 2e-27
 Identities = 116/133 (87%)
 Strand = Plus / Minus

                                                                        
Query: 161  agaactcgatcagagaatgcacgagctgaaaaatgaactcgagggataccatagtggaga 220
            |||||| ||| |||||| ||| || ||||||| |||||| ||||| ||| ||| ||||||
Sbjct: 2895 agaacttgatgagagaaggcatgatctgaaaagtgaactggagggttacaatactggaga 2836

                                                                        
Query: 221  ttctgancaaattaataagaagaaagctcttgatgcattgaagaggatggaaaaatggaa 280
            ||| ||  | |||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 2835 ttcggatgatattaataagaagaaagctcttgatgcattgaataggatggaaaagtggaa 2776

                         
Query: 281  cttgtttaaagat 293
            ||| |||||||||
Sbjct: 2775 cttatttaaagat 2763



 Score =  107 bits (54), Expect = 3e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                        
Query: 61   attaccatgccgtggatatcctattggcagagattgatgtatatgaactttttgctttca 120
            |||||||||| || ||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 3359 attaccatgcagtagatatcctattggcagagattgatgtatacgaactttttgccttca 3300

                                                      
Query: 121  agcattgcatgaaaagaaagatacaacttgccctttgcaaag 162
            |||||||  |   ||||| | |||| ||||||||||||||||
Sbjct: 3299 agcattgtgttggaagaagggtacagcttgccctttgcaaag 3258



 Score =  105 bits (53), Expect = 1e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                        
Query: 301  aggaacatcatagttacacagtggctcgtgattcatttcttgcacacttagggtcaacat 360
            ||||||||||||||||||| ||||||||||||||||| || |||||| | || ||    |
Sbjct: 2542 aggaacatcatagttacactgtggctcgtgattcattcctcgcacaccttggttccgtgt 2483

                                                 
Query: 361  tatggggctctatgaggcatgtaattgctccatctgt 397
            ||||||||||||||||||||||||||||||| |||||
Sbjct: 2482 tatggggctctatgaggcatgtaattgctccttctgt 2446
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  131 bits (66), Expect = 2e-27
 Identities = 116/133 (87%)
 Strand = Plus / Minus

                                                                            
Query: 161      agaactcgatcagagaatgcacgagctgaaaaatgaactcgagggataccatagtggaga 220
                |||||| ||| |||||| ||| || ||||||| |||||| ||||| ||| ||| ||||||
Sbjct: 20481859 agaacttgatgagagaaggcatgatctgaaaagtgaactggagggttacaatactggaga 20481800

                                                                            
Query: 221      ttctgancaaattaataagaagaaagctcttgatgcattgaagaggatggaaaaatggaa 280
                ||| ||  | |||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 20481799 ttcggatgatattaataagaagaaagctcttgatgcattgaataggatggaaaagtggaa 20481740

                             
Query: 281      cttgtttaaagat 293
                ||| |||||||||
Sbjct: 20481739 cttatttaaagat 20481727



 Score =  107 bits (54), Expect = 3e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                            
Query: 61       attaccatgccgtggatatcctattggcagagattgatgtatatgaactttttgctttca 120
                |||||||||| || ||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 20482323 attaccatgcagtagatatcctattggcagagattgatgtatacgaactttttgccttca 20482264

                                                          
Query: 121      agcattgcatgaaaagaaagatacaacttgccctttgcaaag 162
                |||||||  |   ||||| | |||| ||||||||||||||||
Sbjct: 20482263 agcattgtgttggaagaagggtacagcttgccctttgcaaag 20482222



 Score =  105 bits (53), Expect = 1e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                            
Query: 301      aggaacatcatagttacacagtggctcgtgattcatttcttgcacacttagggtcaacat 360
                ||||||||||||||||||| ||||||||||||||||| || |||||| | || ||    |
Sbjct: 20481506 aggaacatcatagttacactgtggctcgtgattcattcctcgcacaccttggttccgtgt 20481447

                                                     
Query: 361      tatggggctctatgaggcatgtaattgctccatctgt 397
                ||||||||||||||||||||||||||||||| |||||
Sbjct: 20481446 tatggggctctatgaggcatgtaattgctccttctgt 20481410
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>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete
              sequence
          Length = 152883

 Score =  131 bits (66), Expect = 2e-27
 Identities = 116/133 (87%)
 Strand = Plus / Minus

                                                                          
Query: 161    agaactcgatcagagaatgcacgagctgaaaaatgaactcgagggataccatagtggaga 220
              |||||| ||| |||||| ||| || ||||||| |||||| ||||| ||| ||| ||||||
Sbjct: 133130 agaacttgatgagagaaggcatgatctgaaaagtgaactggagggttacaatactggaga 133071

                                                                          
Query: 221    ttctgancaaattaataagaagaaagctcttgatgcattgaagaggatggaaaaatggaa 280
              ||| ||  | |||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 133070 ttcggatgatattaataagaagaaagctcttgatgcattgaataggatggaaaagtggaa 133011

                           
Query: 281    cttgtttaaagat 293
              ||| |||||||||
Sbjct: 133010 cttatttaaagat 132998



 Score =  107 bits (54), Expect = 3e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                          
Query: 61     attaccatgccgtggatatcctattggcagagattgatgtatatgaactttttgctttca 120
              |||||||||| || ||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 133594 attaccatgcagtagatatcctattggcagagattgatgtatacgaactttttgccttca 133535

                                                        
Query: 121    agcattgcatgaaaagaaagatacaacttgccctttgcaaag 162
              |||||||  |   ||||| | |||| ||||||||||||||||
Sbjct: 133534 agcattgtgttggaagaagggtacagcttgccctttgcaaag 133493



 Score =  105 bits (53), Expect = 1e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                          
Query: 301    aggaacatcatagttacacagtggctcgtgattcatttcttgcacacttagggtcaacat 360
              ||||||||||||||||||| ||||||||||||||||| || |||||| | || ||    |
Sbjct: 132777 aggaacatcatagttacactgtggctcgtgattcattcctcgcacaccttggttccgtgt 132718

                                                   
Query: 361    tatggggctctatgaggcatgtaattgctccatctgt 397
              ||||||||||||||||||||||||||||||| |||||
Sbjct: 132717 tatggggctctatgaggcatgtaattgctccttctgt 132681
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>ref|NM_125195.3| Arabidopsis thaliana unknown protein AT5G58100 mRNA, complete cds
          Length = 3121

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                    
Query: 90   gagattgatgtatatgaactttttgctttcaagcattgca 129
            |||||||||||||||||||| |||||||||||||| ||||
Sbjct: 1522 gagattgatgtatatgaactatttgctttcaagcactgca 1561
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>dbj|AB024029.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21L19
          Length = 41087

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                     
Query: 90    gagattgatgtatatgaactttttgctttcaagcattgca 129
             |||||||||||||||||||| |||||||||||||| ||||
Sbjct: 25691 gagattgatgtatatgaactatttgctttcaagcactgca 25730
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>emb|CR936324.2| Medicago truncatula chromosome 5 clone mth2-62a22, COMPLETE SEQUENCE
          Length = 121881

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                           
Query: 85     tggcagagattgatgtatatgaactttttgctttcaagcattgca 129
              |||| ||||||||| ||||||| ||||||||||| || |||||||
Sbjct: 102830 tggctgagattgatatatatgagctttttgcttttaaacattgca 102874



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 315    tacacagtggctcgtgattcatttcttgcaca 346
              |||||||| || |||||||| |||||||||||
Sbjct: 105583 tacacagttgcacgtgattcgtttcttgcaca 105614
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>emb|CR962121.2| Medicago truncatula chromosome 5 clone mte1-77f5, COMPLETE SEQUENCE
          Length = 107392

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                         
Query: 85   tggcagagattgatgtatatgaactttttgctttcaagcattgca 129
            |||| ||||||||| ||||||| ||||||||||| || |||||||
Sbjct: 1000 tggctgagattgatatatatgagctttttgcttttaaacattgca 1044



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 315  tacacagtggctcgtgattcatttcttgcaca 346
            |||||||| || |||||||| |||||||||||
Sbjct: 3753 tacacagttgcacgtgattcgtttcttgcaca 3784
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>gb|AC115063.8| Mus musculus chromosome 1, clone RP24-400H18, complete sequence
          Length = 192133

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 91     agattgatgtatatgaacttt 111
              |||||||||||||||||||||
Sbjct: 188443 agattgatgtatatgaacttt 188463
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>gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0039A21, complete sequence
          Length = 139074

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 329   tgattcatttcttgcacactt 349
             |||||||||||||||||||||
Sbjct: 23422 tgattcatttcttgcacactt 23442
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>gb|AC120987.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0007A06, complete sequence
          Length = 148029

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 329   tgattcatttcttgcacactt 349
             |||||||||||||||||||||
Sbjct: 91494 tgattcatttcttgcacactt 91514
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>gb|AC138401.9| Mus musculus chromosome 13, clone RP24-79G5, complete sequence
          Length = 209942

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 284   gtttaaagatacctctgagga 304
             |||||||||||||||||||||
Sbjct: 17980 gtttaaagatacctctgagga 17960
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>gb|AC117599.14| Mus musculus chromosome 1, clone RP23-426D21, complete sequence
          Length = 195683

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 91    agattgatgtatatgaacttt 111
             |||||||||||||||||||||
Sbjct: 67390 agattgatgtatatgaacttt 67410
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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 329     tgattcatttcttgcacactt 349
               |||||||||||||||||||||
Sbjct: 1095377 tgattcatttcttgcacactt 1095397
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>dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138
          Length = 504369

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 338  tcttgcacacttagggtcaacatta 362
            ||||||||| |||||||||||||||
Sbjct: 7130 tcttgcacatttagggtcaacatta 7154
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>gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, complete sequence
          Length = 157450

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 329   tgattcatttcttgcacactt 349
             |||||||||||||||||||||
Sbjct: 92830 tgattcatttcttgcacactt 92850
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 329     tgattcatttcttgcacactt 349
               |||||||||||||||||||||
Sbjct: 1095377 tgattcatttcttgcacactt 1095397
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 329      tgattcatttcttgcacactt 349
                |||||||||||||||||||||
Sbjct: 18056167 tgattcatttcttgcacactt 18056187
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 329     tgattcatttcttgcacactt 349
               |||||||||||||||||||||
Sbjct: 1095374 tgattcatttcttgcacactt 1095394
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>emb|AL807392.7| Mouse DNA sequence from clone RP23-104D24 on chromosome 4, complete
             sequence
          Length = 132773

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    caatcagagaaagattttctt 48
             |||||||||||||||||||||
Sbjct: 85793 caatcagagaaagattttctt 85813
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>ref|NM_123491.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
            serine/threonine kinase/ protein-tyrosine kinase
            AT5G41260 mRNA, complete cds
          Length = 2054

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 110  ttttgctttcaagcattgca 129
            ||||||||||||||||||||
Sbjct: 1535 ttttgctttcaagcattgca 1516
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>gb|DP000017.1| Sus scrofa target 1 genomic scaffold
          Length = 1471440

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    tatatgaactttttgctttc 119
              ||||||||||||||||||||
Sbjct: 715508 tatatgaactttttgctttc 715527
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>gb|AC087160.2| Sus scrofa clone RP44-418J7, complete sequence
          Length = 166651

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   tatatgaactttttgctttc 119
             ||||||||||||||||||||
Sbjct: 37748 tatatgaactttttgctttc 37767
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>emb|AL357712.10| Human DNA sequence from clone GS1-756B1 on chromosome 10 Contains a
             novel pseudogene (FLJ34719 FLJ14936) and the 3' end of a
             novel gene, complete sequence
          Length = 110645

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 363   tggggctctatgaggcatgt 382
             ||||||||||||||||||||
Sbjct: 57051 tggggctctatgaggcatgt 57032
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>emb|AL035604.16|HS38C16 Human DNA sequence from clone RP1-38C16 on chromosome 6q22.33-24.1
             Contains a glyceraldehde-3-phosphate dehydrogenase (GAPD)
             pseudogene, a novel gene, a high-mobility group
             (non-histone chromosomal) protein 1-like 1 (HMG1L1)
             pseudogene and a novel gene, complete sequence
          Length = 139515

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    gaaagattttcttctgttgg 55
             ||||||||||||||||||||
Sbjct: 59740 gaaagattttcttctgttgg 59721
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>gb|AC142236.2| Homo sapiens fosmid clone XXFOS-80445G4 from 7, complete sequence
          Length = 37999

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   atgaaaagaaagatacaact 148
             ||||||||||||||||||||
Sbjct: 21411 atgaaaagaaagatacaact 21430
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>gb|DQ067599.1| Coffea canephora phenylalanine ammonia-lyase (PAL1) gene, complete
            cds
          Length = 4415

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 176  aatgcacgagctgaaaaatg 195
            ||||||||||||||||||||
Sbjct: 2329 aatgcacgagctgaaaaatg 2310
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>emb|CR550304.13| Zebrafish DNA sequence from clone CH211-150I13 in linkage group 13,
             complete sequence
          Length = 118999

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   gatggaaaaatggaacttgt 285
             ||||||||||||||||||||
Sbjct: 91448 gatggaaaaatggaacttgt 91467
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>emb|BX548160.13| Zebrafish DNA sequence from clone DKEY-25G11 in linkage group 11,
              complete sequence
          Length = 237930

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    gatggaaaaatggaacttgt 285
              ||||||||||||||||||||
Sbjct: 163661 gatggaaaaatggaacttgt 163680
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>emb|BX890597.13| Zebrafish DNA sequence from clone DKEY-65F8, complete sequence
          Length = 244779

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 266    gatggaaaaatggaacttgt 285
              ||||||||||||||||||||
Sbjct: 178354 gatggaaaaatggaacttgt 178335
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>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103
          Length = 1282697

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     aagatacaatcagagaaaga 41
              ||||||||||||||||||||
Sbjct: 305317 aagatacaatcagagaaaga 305336
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>ref|XM_679263.1| PREDICTED: Danio rerio similar to polyprotein (LOC556447), mRNA
          Length = 3264

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 266  gatggaaaaatggaacttgt 285
            ||||||||||||||||||||
Sbjct: 1752 gatggaaaaatggaacttgt 1733
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>emb|BX511229.6| Zebrafish DNA sequence from clone CH211-194H2 in linkage group 11,
              complete sequence
          Length = 211986

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    gatggaaaaatggaacttgt 285
              ||||||||||||||||||||
Sbjct: 143405 gatggaaaaatggaacttgt 143424
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>gb|AF321227.1|AF321227 Tribolium castaneum Ftz (ftz), Scr (scr), Dfd (dfd), Zen (zen), and Zen2
              (zen2) genes, complete cds; and Pb (pb) gene, partial cds
          Length = 133406

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     aaaatctacaagatacaatc 32
              ||||||||||||||||||||
Sbjct: 108095 aaaatctacaagatacaatc 108114
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>emb|BX832626.1|CNS09YPT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH85ZD07 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2064

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 110  ttttgctttcaagcattgca 129
            ||||||||||||||||||||
Sbjct: 1672 ttttgctttcaagcattgca 1653
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>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome
          Length = 1738505

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 256     cattgaagaggatggaaaaa 275
               ||||||||||||||||||||
Sbjct: 1425850 cattgaagaggatggaaaaa 1425869
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>emb|AL935129.25| Mouse DNA sequence from clone RP23-181O3 on chromosome 2, complete
              sequence
          Length = 216639

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 345    cacttagggtcaacattatg 364
              ||||||||||||||||||||
Sbjct: 200423 cacttagggtcaacattatg 200404
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>dbj|AB019225.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1O13
          Length = 25275

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   ttttgctttcaagcattgca 129
             ||||||||||||||||||||
Sbjct: 13045 ttttgctttcaagcattgca 13026
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>dbj|AK117571.1| Arabidopsis thaliana At5g41260 mRNA for putative protein kinase,
           complete cds, clone: RAFL17-22-E06
          Length = 1169

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 ttttgctttcaagcattgca 129
           ||||||||||||||||||||
Sbjct: 649 ttttgctttcaagcattgca 630
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>emb|BX072569.6| Zebrafish DNA sequence from clone CH211-184B9 in linkage group 22,
              complete sequence
          Length = 144729

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    gatggaaaaatggaacttgt 285
              ||||||||||||||||||||
Sbjct: 107856 gatggaaaaatggaacttgt 107875



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    gatggaaaaatggaacttgt 285
              ||||||||||||||||||||
Sbjct: 104217 gatggaaaaatggaacttgt 104236


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,705,886
Number of Sequences: 3902068
Number of extensions: 4705886
Number of successful extensions: 93772
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93467
Number of HSP's gapped (non-prelim): 294
length of query: 397
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 375
effective length of database: 17,147,199,772
effective search space: 6430199914500
effective search space used: 6430199914500
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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