ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags37g11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_469230.1| Oryza sativa (japonica cultivar-group), mRNA 557 e-155
2dbj|AK109881.1| Oryza sativa (japonica cultivar-group) cDNA clon... 557 e-155
3dbj|AK103388.1| Oryza sativa (japonica cultivar-group) cDNA clon... 549 e-153
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 246 6e-62
5gb|AC116369.5| Oryza sativa chromosome 3 BAC OSJNBb0113I20 genom... 246 6e-62
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 246 6e-62
7gb|AY110008.1| Zea mays CL3258_1 mRNA sequence 84 5e-13
8gb|BT013718.1| Lycopersicon esculentum clone 132564F, mRNA sequence 60 7e-06
9emb|AL365185.11| Human DNA sequence from clone RP11-416C17 on ch... 46 0.11
10emb|BX248393.5| Zebrafish DNA sequence from clone CH211-233O13, ... 44 0.43
11ref|NM_125763.2| Arabidopsis thaliana pyruvate kinase AT5G63680 ... 42 1.7
12gb|AC146173.2| Pan troglodytes BAC clone RP43-36F20 from 7, comp... 42 1.7
13gb|AC079791.5| Homo sapiens BAC clone RP11-500M10 from 7, comple... 42 1.7
14emb|BX927154.1| Corynebacterium glutamicum ATCC 13032, IS finger... 42 1.7
15emb|BX571867.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 42 1.7
16dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl... 42 1.7
17dbj|AB005234.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 1.7
18gb|L27126.1|CORPYKI Corynebacterium pyruvate kinase gene, comple... 42 1.7
19ref|NM_103364.2| Arabidopsis thaliana NIA2 (NITRATE REDUCTASE 2)... 40 6.7
20ref|XM_506198.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 6.7
21ref|XM_476866.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.7
22gb|AC161262.2| Mus musculus BAC clone RP23-325G1 from chromosome... 40 6.7
23gb|AY575950.1| Synthetic construct nitrate reductase 2 mRNA, com... 40 6.7
24gb|AC123865.5| Mus musculus BAC clone RP23-365C14 from chromosom... 40 6.7
25gb|AC005681.2| Homo sapiens BAC clone GS1-59G8 from 7, complete ... 40 6.7
26emb|AL359202.16| Human DNA sequence from clone RP11-541F16 on ch... 40 6.7
27gb|AY142568.1| Arabidopsis thaliana putative nitrate reductase (... 40 6.7
28gb|AY039914.1| Arabidopsis thaliana putative nitrate reductase (... 40 6.7
29gb|AY035111.1| Arabidopsis thaliana putative nitrate reductase (... 40 6.7
30emb|X13435.1|ATNR2R Arabidopsis thaliana chl-3 mRNA for nitrate ... 40 6.7
31emb|BX470065.7| Zebrafish DNA sequence from clone DKEY-105H11 in... 40 6.7
32gb|AY133530.1| Arabidopsis thaliana At1g37130/F28L22_2 mRNA, com... 40 6.7
33gb|AC112212.2| Homo sapiens chromosome 3 clone RP11-185E15, comp... 40 6.7
34gb|AC023395.8| Homo sapiens chromosome 18, clone RP11-484N16, co... 40 6.7
35gb|AC099328.2| Homo sapiens chromosome 3 clone RP11-62G11, compl... 40 6.7
36ref|XM_695090.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 6.7
37gb|AC021701.8| Homo sapiens chromosome 18, clone RP11-704G7, com... 40 6.7
38gb|AF436835.1|AF436835 Arabidopsis thaliana At1g37130/F28L22_2 m... 40 6.7
39gb|AY858979.1| Nitrosospira sp. TYM9 pyruvate kinase (pykA) gene... 40 6.7
40gb|AY858978.1| Nitrosospira sp. NRS527 pyruvate kinase (pykA) ge... 40 6.7
41gb|AY858977.1| Nitrosospira sp. GS832 pyruvate kinase (pykA) gen... 40 6.7
42gb|AC159710.9| Mus musculus 10 BAC RP24-325N16 (Roswell Park Can... 40 6.7
43gb|AY037183.1| Arabidopsis thaliana At1g37130/F28L22_2 mRNA, com... 40 6.7
44gb|AF367272.1|AF367272 Arabidopsis thaliana At1g37130/F28L22_2 m... 40 6.7
45dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
46emb|BX815547.1|CNS0ABCI Arabidopsis thaliana Full-length cDNA Co... 40 6.7
47gb|AY085149.1| Arabidopsis thaliana clone 13351 mRNA, complete s... 40 6.7
48dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete ge... 40 6.7
49dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
50emb|BX000484.12| Zebrafish DNA sequence from clone CH211-12E1 in... 40 6.7
51gb|AC007505.4|AC007505 Arabidopsis thaliana chromosome I BAC F28... 40 6.7
52dbj|AK070512.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.7
53dbj|AK066918.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.7
54emb|AL157792.3|CNS01RG7 Human chromosome 14 DNA sequence BAC R-3... 40 6.7
55gb|AC099715.9| Mus musculus chromosome 10, clone RP23-346B18, co... 40 6.7
56gb|J03240.1|ATHNRA A.thaliana nitrate reductase mRNA, complete cds 40 6.7
57dbj|D87187.1| Mus musculus gene for proteoglycan, partial cds 40 6.7

>ref|XM_469230.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1647

 Score =  557 bits (281), Expect = e-155
 Identities = 418/465 (89%)
 Strand = Plus / Plus

                                                                       
Query: 2   cattctagttggtgatgagcttgtcattgatggtggaatggcgacatttgaagttacaga 61
           |||||||||||||||||||||||| |||||||| |||||||| |||||||||||||  ||
Sbjct: 525 cattctagttggtgatgagcttgtaattgatggaggaatggcaacatttgaagttattga 584

                                                                       
Query: 62  gaagatcgggggtgatctgcgctgtaagtgcacagacccaggtttgcttcttcctcgagc 121
           |||| ||||   |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gaaggtcggaaatgatttgcgctgtaagtgcacagacccaggtttgcttcttcctcgagc 644

                                                                       
Query: 122 caagttgtcattctggagggacggaaaattagttgaaaggaactttgggcttcctacatt 181
           |||  |||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 645 caaactgtcattctggaggaatggaaaattagttgaaaggaactttgggcttcctacatt 704

                                                                       
Query: 182 atcgacaaaggattgggctgacattgaatttggcataactgaaggagtcgattgtattgc 241
            ||  |||||||||||||||||||||||||||| ||| |||||||||| ||||| || ||
Sbjct: 705 gtcagcaaaggattgggctgacattgaatttgggatagctgaaggagttgattgcatcgc 764

                                                                       
Query: 242 tctttcatttgtaaaggatgctaatgacattaantccctgaaaacttacctctccagaag 301
           ||||||||||||||| |||||||||||||| || |  || || |||||||||||||||| 
Sbjct: 765 tctttcatttgtaaaagatgctaatgacatcaagtatctcaagacttacctctccagaaa 824

                                                                       
Query: 302 atcattagaacacattaagatattcgcaaagatcgagagtctggaatctctcaagaacct 361
           ||||||||||||||| || |||||||| ||| | |||||||| ||||| |||||||||||
Sbjct: 825 atcattagaacacatcaaaatattcgcgaaggttgagagtcttgaatcactcaagaacct 884

                                                                       
Query: 362 taaagacatcatanaggcatcggatggagtcatggttgcgcgtggtgatcttggagttca 421
           ||||||||||||| ||||||| |||||||| ||||| || ||||||||||||||||||||
Sbjct: 885 taaagacatcatagaggcatctgatggagttatggtagcacgtggtgatcttggagttca 944

                                                        
Query: 422 ggttcctctanaacaaatcccanccatccaagaggcgattgttga 466
           | ||||| || ||||||||||| ||||||||||||| ||||||||
Sbjct: 945 gattcctttagaacaaatcccagccatccaagaggcaattgttga 989



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>dbj|AK109881.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-C12, full
            insert sequence
          Length = 1806

 Score =  557 bits (281), Expect = e-155
 Identities = 418/465 (89%)
 Strand = Plus / Plus

                                                                        
Query: 2    cattctagttggtgatgagcttgtcattgatggtggaatggcgacatttgaagttacaga 61
            |||||||||||||||||||||||| |||||||| |||||||| |||||||||||||  ||
Sbjct: 599  cattctagttggtgatgagcttgtaattgatggaggaatggcaacatttgaagttattga 658

                                                                        
Query: 62   gaagatcgggggtgatctgcgctgtaagtgcacagacccaggtttgcttcttcctcgagc 121
            |||| ||||   |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659  gaaggtcggaaatgatttgcgctgtaagtgcacagacccaggtttgcttcttcctcgagc 718

                                                                        
Query: 122  caagttgtcattctggagggacggaaaattagttgaaaggaactttgggcttcctacatt 181
            |||  |||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 719  caaactgtcattctggaggaatggaaaattagttgaaaggaactttgggcttcctacatt 778

                                                                        
Query: 182  atcgacaaaggattgggctgacattgaatttggcataactgaaggagtcgattgtattgc 241
             ||  |||||||||||||||||||||||||||| ||| |||||||||| ||||| || ||
Sbjct: 779  gtcagcaaaggattgggctgacattgaatttgggatagctgaaggagttgattgcatcgc 838

                                                                        
Query: 242  tctttcatttgtaaaggatgctaatgacattaantccctgaaaacttacctctccagaag 301
            ||||||||||||||| |||||||||||||| || |  || || |||||||||||||||| 
Sbjct: 839  tctttcatttgtaaaagatgctaatgacatcaagtatctcaagacttacctctccagaaa 898

                                                                        
Query: 302  atcattagaacacattaagatattcgcaaagatcgagagtctggaatctctcaagaacct 361
            ||||||||||||||| || |||||||| ||| | |||||||| ||||| |||||||||||
Sbjct: 899  atcattagaacacatcaaaatattcgcgaaggttgagagtcttgaatcactcaagaacct 958

                                                                        
Query: 362  taaagacatcatanaggcatcggatggagtcatggttgcgcgtggtgatcttggagttca 421
            ||||||||||||| ||||||| |||||||| ||||| || ||||||||||||||||||||
Sbjct: 959  taaagacatcatagaggcatctgatggagttatggtagcacgtggtgatcttggagttca 1018

                                                         
Query: 422  ggttcctctanaacaaatcccanccatccaagaggcgattgttga 466
            | ||||| || ||||||||||| ||||||||||||| ||||||||
Sbjct: 1019 gattcctttagaacaaatcccagccatccaagaggcaattgttga 1063



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>dbj|AK103388.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127I24, full
            insert sequence
          Length = 1883

 Score =  549 bits (277), Expect = e-153
 Identities = 417/465 (89%)
 Strand = Plus / Plus

                                                                        
Query: 2    cattctagttggtgatgagcttgtcattgatggtggaatggcgacatttgaagttacaga 61
            |||||||||||||||||||||||| |||||||| |||||||| || ||||||||||  ||
Sbjct: 600  cattctagttggtgatgagcttgtaattgatggaggaatggcaacgtttgaagttattga 659

                                                                        
Query: 62   gaagatcgggggtgatctgcgctgtaagtgcacagacccaggtttgcttcttcctcgagc 121
            |||| ||||   |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660  gaaggtcggaaatgatttgcgctgtaagtgcacagacccaggtttgcttcttcctcgagc 719

                                                                        
Query: 122  caagttgtcattctggagggacggaaaattagttgaaaggaactttgggcttcctacatt 181
            |||  |||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 720  caaactgtcattctggaggaatggaaaattagttgaaaggaactttgggcttcctacatt 779

                                                                        
Query: 182  atcgacaaaggattgggctgacattgaatttggcataactgaaggagtcgattgtattgc 241
             ||  |||||||||||||||||||||||||||| ||| |||||||||| ||||| || ||
Sbjct: 780  gtcagcaaaggattgggctgacattgaatttgggatagctgaaggagttgattgcatcgc 839

                                                                        
Query: 242  tctttcatttgtaaaggatgctaatgacattaantccctgaaaacttacctctccagaag 301
            ||||||||||||||| |||||||||||||| || |  || || |||||||||||||||| 
Sbjct: 840  tctttcatttgtaaaagatgctaatgacatcaagtatctcaagacttacctctccagaaa 899

                                                                        
Query: 302  atcattagaacacattaagatattcgcaaagatcgagagtctggaatctctcaagaacct 361
            ||||||||||||||| || |||||||| ||| | |||||||| ||||| |||||||||||
Sbjct: 900  atcattagaacacatcaaaatattcgcgaaggttgagagtcttgaatcactcaagaacct 959

                                                                        
Query: 362  taaagacatcatanaggcatcggatggagtcatggttgcgcgtggtgatcttggagttca 421
            ||||||||||||| ||||||| |||||||| ||||| || ||||||||||||||||||||
Sbjct: 960  taaagacatcatagaggcatctgatggagttatggtggcacgtggtgatcttggagttca 1019

                                                         
Query: 422  ggttcctctanaacaaatcccanccatccaagaggcgattgttga 466
            | ||||| || ||||||||||| ||||||||||||| ||||||||
Sbjct: 1020 gattcctttagaacaaatcccagccatccaagaggcaattgttga 1064



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  246 bits (124), Expect = 6e-62
 Identities = 166/180 (92%)
 Strand = Plus / Minus

                                                                            
Query: 2        cattctagttggtgatgagcttgtcattgatggtggaatggcgacatttgaagttacaga 61
                |||||||||||||||||||||||| |||||||| |||||||| |||||||||||||  ||
Sbjct: 26237740 cattctagttggtgatgagcttgtaattgatggaggaatggcaacatttgaagttattga 26237681

                                                                            
Query: 62       gaagatcgggggtgatctgcgctgtaagtgcacagacccaggtttgcttcttcctcgagc 121
                |||| ||||   |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26237680 gaaggtcggaaatgatttgcgctgtaagtgcacagacccaggtttgcttcttcctcgagc 26237621

                                                                            
Query: 122      caagttgtcattctggagggacggaaaattagttgaaaggaactttgggcttcctacatt 181
                |||  |||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 26237620 caaactgtcattctggaggaatggaaaattagttgaaaggaactttgggcttcctacatt 26237561



 Score =  180 bits (91), Expect = 3e-42
 Identities = 139/156 (89%)
 Strand = Plus / Minus

                                                                            
Query: 311      acacattaagatattcgcaaagatcgagagtctggaatctctcaagaaccttaaagacat 370
                |||||| || |||||||| ||| | |||||||| ||||| ||||||||||||||||||||
Sbjct: 26236599 acacatcaaaatattcgcgaaggttgagagtcttgaatcactcaagaaccttaaagacat 26236540

                                                                            
Query: 371      catanaggcatcggatggagtcatggttgcgcgtggtgatcttggagttcaggttcctct 430
                |||| ||||||| |||||||| ||||| || ||||||||||||||||||||| ||||| |
Sbjct: 26236539 catagaggcatctgatggagttatggtagcacgtggtgatcttggagttcagattccttt 26236480

                                                    
Query: 431      anaacaaatcccanccatccaagaggcgattgttga 466
                | ||||||||||| ||||||||||||| ||||||||
Sbjct: 26236479 agaacaaatcccagccatccaagaggcaattgttga 26236444



 Score =  139 bits (70), Expect = 1e-29
 Identities = 108/121 (89%)
 Strand = Plus / Minus

                                                                            
Query: 190      aggattgggctgacattgaatttggcataactgaaggagtcgattgtattgctctttcat 249
                ||||||||||||||||||||||||| ||| |||||||||| ||||| || ||||||||||
Sbjct: 26237200 aggattgggctgacattgaatttgggatagctgaaggagttgattgcatcgctctttcat 26237141

                                                                            
Query: 250      ttgtaaaggatgctaatgacattaantccctgaaaacttacctctccagaagatcattag 309
                ||||||| |||||||||||||| || |  || || |||||||||||||||| ||||||||
Sbjct: 26237140 ttgtaaaagatgctaatgacatcaagtatctcaagacttacctctccagaaaatcattag 26237081

                 
Query: 310      a 310
                |
Sbjct: 26237080 a 26237080



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>gb|AC116369.5| Oryza sativa chromosome 3 BAC OSJNBb0113I20 genomic sequence, complete
             sequence
          Length = 122939

 Score =  246 bits (124), Expect = 6e-62
 Identities = 166/180 (92%)
 Strand = Plus / Minus

                                                                         
Query: 2     cattctagttggtgatgagcttgtcattgatggtggaatggcgacatttgaagttacaga 61
             |||||||||||||||||||||||| |||||||| |||||||| |||||||||||||  ||
Sbjct: 67199 cattctagttggtgatgagcttgtaattgatggaggaatggcaacatttgaagttattga 67140

                                                                         
Query: 62    gaagatcgggggtgatctgcgctgtaagtgcacagacccaggtttgcttcttcctcgagc 121
             |||| ||||   |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67139 gaaggtcggaaatgatttgcgctgtaagtgcacagacccaggtttgcttcttcctcgagc 67080

                                                                         
Query: 122   caagttgtcattctggagggacggaaaattagttgaaaggaactttgggcttcctacatt 181
             |||  |||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 67079 caaactgtcattctggaggaatggaaaattagttgaaaggaactttgggcttcctacatt 67020



 Score =  180 bits (91), Expect = 3e-42
 Identities = 139/156 (89%)
 Strand = Plus / Minus

                                                                         
Query: 311   acacattaagatattcgcaaagatcgagagtctggaatctctcaagaaccttaaagacat 370
             |||||| || |||||||| ||| | |||||||| ||||| ||||||||||||||||||||
Sbjct: 66058 acacatcaaaatattcgcgaaggttgagagtcttgaatcactcaagaaccttaaagacat 65999

                                                                         
Query: 371   catanaggcatcggatggagtcatggttgcgcgtggtgatcttggagttcaggttcctct 430
             |||| ||||||| |||||||| ||||| || ||||||||||||||||||||| ||||| |
Sbjct: 65998 catagaggcatctgatggagttatggtagcacgtggtgatcttggagttcagattccttt 65939

                                                 
Query: 431   anaacaaatcccanccatccaagaggcgattgttga 466
             | ||||||||||| ||||||||||||| ||||||||
Sbjct: 65938 agaacaaatcccagccatccaagaggcaattgttga 65903



 Score =  139 bits (70), Expect = 1e-29
 Identities = 108/121 (89%)
 Strand = Plus / Minus

                                                                         
Query: 190   aggattgggctgacattgaatttggcataactgaaggagtcgattgtattgctctttcat 249
             ||||||||||||||||||||||||| ||| |||||||||| ||||| || ||||||||||
Sbjct: 66659 aggattgggctgacattgaatttgggatagctgaaggagttgattgcatcgctctttcat 66600

                                                                         
Query: 250   ttgtaaaggatgctaatgacattaantccctgaaaacttacctctccagaagatcattag 309
             ||||||| |||||||||||||| || |  || || |||||||||||||||| ||||||||
Sbjct: 66599 ttgtaaaagatgctaatgacatcaagtatctcaagacttacctctccagaaaatcattag 66540

              
Query: 310   a 310
             |
Sbjct: 66539 a 66539



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  246 bits (124), Expect = 6e-62
 Identities = 166/180 (92%)
 Strand = Plus / Minus

                                                                            
Query: 2        cattctagttggtgatgagcttgtcattgatggtggaatggcgacatttgaagttacaga 61
                |||||||||||||||||||||||| |||||||| |||||||| |||||||||||||  ||
Sbjct: 26329049 cattctagttggtgatgagcttgtaattgatggaggaatggcaacatttgaagttattga 26328990

                                                                            
Query: 62       gaagatcgggggtgatctgcgctgtaagtgcacagacccaggtttgcttcttcctcgagc 121
                |||| ||||   |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26328989 gaaggtcggaaatgatttgcgctgtaagtgcacagacccaggtttgcttcttcctcgagc 26328930

                                                                            
Query: 122      caagttgtcattctggagggacggaaaattagttgaaaggaactttgggcttcctacatt 181
                |||  |||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 26328929 caaactgtcattctggaggaatggaaaattagttgaaaggaactttgggcttcctacatt 26328870



 Score =  180 bits (91), Expect = 3e-42
 Identities = 139/156 (89%)
 Strand = Plus / Minus

                                                                            
Query: 311      acacattaagatattcgcaaagatcgagagtctggaatctctcaagaaccttaaagacat 370
                |||||| || |||||||| ||| | |||||||| ||||| ||||||||||||||||||||
Sbjct: 26327908 acacatcaaaatattcgcgaaggttgagagtcttgaatcactcaagaaccttaaagacat 26327849

                                                                            
Query: 371      catanaggcatcggatggagtcatggttgcgcgtggtgatcttggagttcaggttcctct 430
                |||| ||||||| |||||||| ||||| || ||||||||||||||||||||| ||||| |
Sbjct: 26327848 catagaggcatctgatggagttatggtagcacgtggtgatcttggagttcagattccttt 26327789

                                                    
Query: 431      anaacaaatcccanccatccaagaggcgattgttga 466
                | ||||||||||| ||||||||||||| ||||||||
Sbjct: 26327788 agaacaaatcccagccatccaagaggcaattgttga 26327753



 Score =  139 bits (70), Expect = 1e-29
 Identities = 108/121 (89%)
 Strand = Plus / Minus

                                                                            
Query: 190      aggattgggctgacattgaatttggcataactgaaggagtcgattgtattgctctttcat 249
                ||||||||||||||||||||||||| ||| |||||||||| ||||| || ||||||||||
Sbjct: 26328509 aggattgggctgacattgaatttgggatagctgaaggagttgattgcatcgctctttcat 26328450

                                                                            
Query: 250      ttgtaaaggatgctaatgacattaantccctgaaaacttacctctccagaagatcattag 309
                ||||||| |||||||||||||| || |  || || |||||||||||||||| ||||||||
Sbjct: 26328449 ttgtaaaagatgctaatgacatcaagtatctcaagacttacctctccagaaaatcattag 26328390

                 
Query: 310      a 310
                |
Sbjct: 26328389 a 26328389



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>gb|AY110008.1| Zea mays CL3258_1 mRNA sequence
          Length = 1061

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                       
Query: 386 tggagtcatggttgcgcgtggtgatcttggagttcaggttcctctanaacaaatcccanc 445
           |||||| ||||| || || || ||||||||||||||| |||||||  |||| |||||| |
Sbjct: 904 tggagttatggtagcacgaggggatcttggagttcagattcctcttgaacagatcccagc 845

                                                              
Query: 446 catccaagaggcgattgttgaattatgtanaaacctgaacaagcctgtgat 496
           ||| |||||  | |||||| || |||||| | |||||||||||||||||||
Sbjct: 844 cattcaagaatcaattgttaaactatgtagacacctgaacaagcctgtgat 794



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 99/119 (83%)
 Strand = Plus / Minus

                                                                        
Query: 231  gattgtattgctctttcatttgtaaaggatgctaatgacattaantccctgaaaacttac 290
            ||||| |||||||| ||||||||||| ||||||||||| || ||     ||||| |||||
Sbjct: 1059 gattgcattgctctatcatttgtaaatgatgctaatgatataaagcagttgaaagcttac 1000

                                                                       
Query: 291  ctctccagaagatcattagaacacattaagatattcgcaaagatcgagagtctggaatc 349
            ||||| |||||||| ||||| ||||| ||  |||| |||||||| |||||||| |||||
Sbjct: 999  ctctctagaagatcgttagagcacatcaaagtatttgcaaagattgagagtctagaatc 941



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>gb|BT013718.1| Lycopersicon esculentum clone 132564F, mRNA sequence
          Length = 2032

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 96/118 (81%)
 Strand = Plus / Plus

                                                                       
Query: 11  tggtgatgagcttgtcattgatggtggaatggcgacatttgaagttacagagaagatcgg 70
           |||||||||  |||||||||| || |||||||| || |||||||||| ||||||  | ||
Sbjct: 781 tggtgatgaaattgtcattgacggaggaatggcaacttttgaagttatagagaaagttgg 840

                                                                     
Query: 71  gggtgatctgcgctgtaagtgcacagacccaggtttgcttcttcctcgagccaagttg 128
              || | ||||||| |||||||||||||| ||| | ||||| ||| |||| ||||||
Sbjct: 841 taatggtttgcgctgcaagtgcacagaccccggtctacttctgcctagagctaagttg 898



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                        
Query: 180  ttatcgacaaaggattgggctgacattgaatttggcataactgaaggagtcgattgtatt 239
            ||||| |||||||||||| | ||||||| |||||| ||| ||||||   ||||||  |||
Sbjct: 950  ttatcaacaaaggattggtcagacattgtatttggaatatctgaagatatcgatttcatt 1009

                             
Query: 240  gctctttcatttgtaaa 256
            ||  |||||||||||||
Sbjct: 1010 gcagtttcatttgtaaa 1026



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>emb|AL365185.11| Human DNA sequence from clone RP11-416C17 on chromosome 10 Contains
             part of gene FLJ11218, complete sequence
          Length = 150635

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 231   gattgtattgctctttcatttgt 253
             |||||||||||||||||||||||
Sbjct: 61299 gattgtattgctctttcatttgt 61321



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>emb|BX248393.5| Zebrafish DNA sequence from clone CH211-233O13, complete sequence
          Length = 166286

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 162    aactttgggcttcctacattat 183
              ||||||||||||||||||||||
Sbjct: 103673 aactttgggcttcctacattat 103694



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>ref|NM_125763.2| Arabidopsis thaliana pyruvate kinase AT5G63680 mRNA, complete cds
          Length = 1880

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 391 tcatggttgcgcgtggtgatcttgg 415
           |||||||||| ||||||||||||||
Sbjct: 904 tcatggttgctcgtggtgatcttgg 928



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>gb|AC146173.2| Pan troglodytes BAC clone RP43-36F20 from 7, complete sequence
          Length = 197121

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 354    aagaaccttaaagacatcata 374
              |||||||||||||||||||||
Sbjct: 179673 aagaaccttaaagacatcata 179653



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>gb|AC079791.5| Homo sapiens BAC clone RP11-500M10 from 7, complete sequence
          Length = 103836

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 354   aagaaccttaaagacatcata 374
             |||||||||||||||||||||
Sbjct: 49415 aagaaccttaaagacatcata 49395



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>emb|BX927154.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5,
             complete genome; segment 7/10
          Length = 349575

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 390   gtcatggttgcgcgtggtgatcttggagttcaggttcctct 430
             ||||||||||| |||||||| || || ||| ||||||||||
Sbjct: 81437 gtcatggttgctcgtggtgacctcggcgttgaggttcctct 81397



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>emb|BX571867.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              9/17
          Length = 336609

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 391    tcatggttgcgcgtggtgatcttgg 415
              |||||||||| ||||||||||||||
Sbjct: 269630 tcatggttgctcgtggtgatcttgg 269654



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>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                        
Query: 390     gtcatggttgcgcgtggtgatcttggagttcaggttcctct 430
               ||||||||||| |||||||| || || ||| ||||||||||
Sbjct: 2206381 gtcatggttgctcgtggtgacctcggcgttgaggttcctct 2206341



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>dbj|AB005234.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK5
          Length = 89779

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 391   tcatggttgcgcgtggtgatcttgg 415
             |||||||||| ||||||||||||||
Sbjct: 44903 tcatggttgctcgtggtgatcttgg 44927



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>gb|L27126.1|CORPYKI Corynebacterium pyruvate kinase gene, complete cds
          Length = 2795

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 390  gtcatggttgcgcgtggtgatcttggagttcaggttcctct 430
            ||||||||||| |||||||| || || ||| ||||||||||
Sbjct: 1457 gtcatggttgctcgtggtgacctcggcgttgaggttcctct 1497



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>ref|NM_103364.2| Arabidopsis thaliana NIA2 (NITRATE REDUCTASE 2) AT1G37130 (NIA2)
            mRNA, complete cds
          Length = 3130

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 18   gagcttgtcattgatggtgg 37
            ||||||||||||||||||||
Sbjct: 2217 gagcttgtcattgatggtgg 2198



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>ref|XM_506198.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1014_E09.29
           mRNA
          Length = 1626

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 8   agttggtgatgagcttgtcattgatggtggaatggc 43
           |||||||||||||||| |  |||||||||| |||||
Sbjct: 240 agttggtgatgagcttcttgttgatggtggcatggc 275



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>ref|XM_476866.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2005

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 8   agttggtgatgagcttgtcattgatggtggaatggc 43
           |||||||||||||||| |  |||||||||| |||||
Sbjct: 581 agttggtgatgagcttcttgttgatggtggcatggc 616



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>gb|AC161262.2| Mus musculus BAC clone RP23-325G1 from chromosome 9, complete sequence
          Length = 204750

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     gtcattgatggtggaatggc 43
              ||||||||||||||||||||
Sbjct: 100995 gtcattgatggtggaatggc 101014



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>gb|AY575950.1| Synthetic construct nitrate reductase 2 mRNA, complete cds
          Length = 2787

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 18   gagcttgtcattgatggtgg 37
            ||||||||||||||||||||
Sbjct: 2160 gagcttgtcattgatggtgg 2141



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>gb|AC123865.5| Mus musculus BAC clone RP23-365C14 from chromosome 10, complete sequence
          Length = 212994

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     acccaggtttgcttcttcct 116
              ||||||||||||||||||||
Sbjct: 163159 acccaggtttgcttcttcct 163178



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>gb|AC005681.2| Homo sapiens BAC clone GS1-59G8 from 7, complete sequence
          Length = 129989

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    tgcacagacccaggtttgct 109
             ||||||||||||||||||||
Sbjct: 90897 tgcacagacccaggtttgct 90916



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>emb|AL359202.16| Human DNA sequence from clone RP11-541F16 on chromosome 9, complete
             sequence
          Length = 115372

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   tattgctctttcatttgtaa 255
             ||||||||||||||||||||
Sbjct: 76086 tattgctctttcatttgtaa 76067



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>gb|AY142568.1| Arabidopsis thaliana putative nitrate reductase (At1g37130) mRNA,
            complete cds
          Length = 2785

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 18   gagcttgtcattgatggtgg 37
            ||||||||||||||||||||
Sbjct: 2127 gagcttgtcattgatggtgg 2108



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>gb|AY039914.1| Arabidopsis thaliana putative nitrate reductase (At1g37130) mRNA,
            complete cds
          Length = 2985

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 18   gagcttgtcattgatggtgg 37
            ||||||||||||||||||||
Sbjct: 2211 gagcttgtcattgatggtgg 2192



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>gb|AY035111.1| Arabidopsis thaliana putative nitrate reductase (At1g37130) mRNA,
            complete cds
          Length = 3006

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 18   gagcttgtcattgatggtgg 37
            ||||||||||||||||||||
Sbjct: 2217 gagcttgtcattgatggtgg 2198



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>emb|X13435.1|ATNR2R Arabidopsis thaliana chl-3 mRNA for nitrate reductase NR2
          Length = 1188

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 18  gagcttgtcattgatggtgg 37
           ||||||||||||||||||||
Sbjct: 564 gagcttgtcattgatggtgg 545



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>emb|BX470065.7| Zebrafish DNA sequence from clone DKEY-105H11 in linkage group 24,
              complete sequence
          Length = 198444

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 350    tctcaagaaccttaaagaca 369
              ||||||||||||||||||||
Sbjct: 131050 tctcaagaaccttaaagaca 131069



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>gb|AY133530.1| Arabidopsis thaliana At1g37130/F28L22_2 mRNA, complete cds
          Length = 2754

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 18   gagcttgtcattgatggtgg 37
            ||||||||||||||||||||
Sbjct: 2127 gagcttgtcattgatggtgg 2108



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>gb|AC112212.2| Homo sapiens chromosome 3 clone RP11-185E15, complete sequence
          Length = 168752

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 46     catttgaagttacagagaag 65
              ||||||||||||||||||||
Sbjct: 131589 catttgaagttacagagaag 131608



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>gb|AC023395.8| Homo sapiens chromosome 18, clone RP11-484N16, complete sequence
          Length = 160084

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   ggaaaattagttgaaaggaa 163
             ||||||||||||||||||||
Sbjct: 53290 ggaaaattagttgaaaggaa 53309



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>gb|AC099328.2| Homo sapiens chromosome 3 clone RP11-62G11, complete sequence
          Length = 156066

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    catttgaagttacagagaag 65
             ||||||||||||||||||||
Sbjct: 35806 catttgaagttacagagaag 35825



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>ref|XM_695090.1| PREDICTED: Danio rerio hypothetical protein LOC571492 (LOC571492),
           mRNA
          Length = 1390

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 350 tctcaagaaccttaaagaca 369
           ||||||||||||||||||||
Sbjct: 676 tctcaagaaccttaaagaca 695



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>gb|AC021701.8| Homo sapiens chromosome 18, clone RP11-704G7, complete sequence
          Length = 170311

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 144    ggaaaattagttgaaaggaa 163
              ||||||||||||||||||||
Sbjct: 161281 ggaaaattagttgaaaggaa 161300



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>gb|AF436835.1|AF436835 Arabidopsis thaliana At1g37130/F28L22_2 mRNA, complete cds
          Length = 3042

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 18   gagcttgtcattgatggtgg 37
            ||||||||||||||||||||
Sbjct: 2217 gagcttgtcattgatggtgg 2198



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>gb|AY858979.1| Nitrosospira sp. TYM9 pyruvate kinase (pykA) gene, complete cds
          Length = 1497

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 391 tcatggttgcgcgtggtgatcttg 414
           ||||||||||||| ||||||||||
Sbjct: 755 tcatggttgcgcgaggtgatcttg 778



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>gb|AY858978.1| Nitrosospira sp. NRS527 pyruvate kinase (pykA) gene, complete cds
          Length = 1497

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 391 tcatggttgcgcgtggtgatcttg 414
           ||||||||||||| ||||||||||
Sbjct: 755 tcatggttgcgcgaggtgatcttg 778



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>gb|AY858977.1| Nitrosospira sp. GS832 pyruvate kinase (pykA) gene, complete cds
          Length = 1498

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 391 tcatggttgcgcgtggtgatcttg 414
           ||||||||||||| ||||||||||
Sbjct: 756 tcatggttgcgcgaggtgatcttg 779



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>gb|AC159710.9| Mus musculus 10 BAC RP24-325N16 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 204302

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     gacatttgaagttacagaga 63
              ||||||||||||||||||||
Sbjct: 182905 gacatttgaagttacagaga 182924



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>gb|AY037183.1| Arabidopsis thaliana At1g37130/F28L22_2 mRNA, complete cds
          Length = 2976

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 18   gagcttgtcattgatggtgg 37
            ||||||||||||||||||||
Sbjct: 2217 gagcttgtcattgatggtgg 2198



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>gb|AF367272.1|AF367272 Arabidopsis thaliana At1g37130/F28L22_2 mRNA, complete cds
          Length = 3076

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 18   gagcttgtcattgatggtgg 37
            ||||||||||||||||||||
Sbjct: 2211 gagcttgtcattgatggtgg 2192



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                   
Query: 8       agttggtgatgagcttgtcattgatggtggaatggc 43
               |||||||||||||||| |  |||||||||| |||||
Sbjct: 4301025 agttggtgatgagcttcttgttgatggtggcatggc 4301060



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>emb|BX815547.1|CNS0ABCI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS70ZF10 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1175

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 18  gagcttgtcattgatggtgg 37
           ||||||||||||||||||||
Sbjct: 370 gagcttgtcattgatggtgg 351



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>gb|AY085149.1| Arabidopsis thaliana clone 13351 mRNA, complete sequence
          Length = 2118

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 8   agttggtgatgagcttgtcattgatggtggaatggcgacatttgaagt 55
           |||||||||||| ||| |  |||||||||| |||| || |||||||||
Sbjct: 832 agttggtgatgaacttctggttgatggtgggatggtgagatttgaagt 879



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>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     ttggtgatgagcttgtcatt 29
              ||||||||||||||||||||
Sbjct: 281904 ttggtgatgagcttgtcatt 281885



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>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1014_E09
          Length = 184624

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 8      agttggtgatgagcttgtcattgatggtggaatggc 43
              |||||||||||||||| |  |||||||||| |||||
Sbjct: 122079 agttggtgatgagcttcttgttgatggtggcatggc 122114



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>emb|BX000484.12| Zebrafish DNA sequence from clone CH211-12E1 in linkage group 2,
             complete sequence
          Length = 158932

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   ttagaacacattaagatatt 325
             ||||||||||||||||||||
Sbjct: 96298 ttagaacacattaagatatt 96279



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>gb|AC007505.4|AC007505 Arabidopsis thaliana chromosome I BAC F28L22 genomic sequence, complete
             sequence
          Length = 134499

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    gagcttgtcattgatggtgg 37
             ||||||||||||||||||||
Sbjct: 56961 gagcttgtcattgatggtgg 56980



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>dbj|AK070512.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055B17, full
           insert sequence
          Length = 2023

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 8   agttggtgatgagcttgtcattgatggtggaatggc 43
           |||||||||||||||| |  |||||||||| |||||
Sbjct: 599 agttggtgatgagcttcttgttgatggtggcatggc 634



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>dbj|AK066918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089N03, full
           insert sequence
          Length = 1625

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 8   agttggtgatgagcttgtcattgatggtggaatggc 43
           |||||||||||||||| |  |||||||||| |||||
Sbjct: 239 agttggtgatgagcttcttgttgatggtggcatggc 274



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>emb|AL157792.3|CNS01RG7 Human chromosome 14 DNA sequence BAC R-388M7 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 194760

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   attagaacacattaagatat 324
             ||||||||||||||||||||
Sbjct: 94624 attagaacacattaagatat 94605



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>gb|AC099715.9| Mus musculus chromosome 10, clone RP23-346B18, complete sequence
          Length = 206811

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    gacatttgaagttacagaga 63
             ||||||||||||||||||||
Sbjct: 23454 gacatttgaagttacagaga 23473



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>gb|J03240.1|ATHNRA A.thaliana nitrate reductase mRNA, complete cds
          Length = 3031

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 18   gagcttgtcattgatggtgg 37
            ||||||||||||||||||||
Sbjct: 2205 gagcttgtcattgatggtgg 2186



to top

>dbj|D87187.1| Mus musculus gene for proteoglycan, partial cds
          Length = 4002

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 44   gacatttgaagttacagaga 63
            ||||||||||||||||||||
Sbjct: 2222 gacatttgaagttacagaga 2241


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,839,039
Number of Sequences: 3902068
Number of extensions: 3839039
Number of successful extensions: 66610
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66444
Number of HSP's gapped (non-prelim): 166
length of query: 496
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 474
effective length of database: 17,147,199,772
effective search space: 8127772691928
effective search space used: 8127772691928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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