>TFP11_MOUSE (Q9ERA6) Tuftelin-interacting protein 11 (Tuftelin-interacting|
           protein 39)
          Length = 838

 Score = 31.6 bits (70), Expect = 0.54
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +1

Query: 16  GSAKSSLPPNVKDLLDSSEEKANLVLRPI 102
           G A SS+P N KDL+++  E+ N+V  P+
Sbjct: 764 GVAASSVPMNFKDLIETKAEEHNIVFMPV 792

>TFP11_HUMAN (Q9UBB9) Tuftelin-interacting protein 11|
          Length = 837

 Score = 31.6 bits (70), Expect = 0.54
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +1

Query: 16  GSAKSSLPPNVKDLLDSSEEKANLVLRPI 102
           G A SS+P N KDL+++  E+ N+V  P+
Sbjct: 763 GVAASSVPMNFKDLIETKAEEHNIVFMPV 791

>Y1292_METJA (Q58688) Hypothetical protein MJ1292|
          Length = 552

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +1

Query: 28  SSLPPNVKDLLDSSEEKANLVLRPIGSALQQVYIIIEGIEKNVGLNPSDPI 180
           S L  N KDL    + K   ++  I    ++ YII + I  N+ L P+ P+
Sbjct: 450 SGLKINAKDLSHDGKIKLKFIVTAITPPYEKYYIIKKNISINLSLIPTPPV 500

>THS_METKA (P50016) Thermosome subunit (Chaperonin-like complex) (CLIC)|
          Length = 545

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +1

Query: 16  GSAKSSLPPNVKDLLDSSEEKANLVLRPIGSALQQVYIIIEGIEKNVGLNPSDPIVQL 189
           G+ +  +   ++D  D  E +  L +     AL+   II   + +N GL+P D +VQL
Sbjct: 414 GAPEVEVARQLRDFADGVEGREQLAVEAFADALE---IIPRTLAENSGLDPIDVLVQL 468

>HV02_HETFR (P04215) Ig heavy chain V region HC-3 (Fragment)|
          Length = 89

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +1

Query: 1   LVYYYGSAKSSLPPNVKDLLDSSEEKAN 84
           LV YYG +K++  P +KD   +S++ +N
Sbjct: 20  LVSYYGPSKNAYAPEIKDRFTASKDTSN 47

>RECO_STAES (Q8CP22) DNA repair protein recO (Recombination protein O)|
          Length = 253

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -2

Query: 280 SIQVTSLQNSRHTRRXSKISLLXLNLQAKLPIEQLGHLGSNQ 155
           +I  ++L   +H    S  +L  LN+  +LPI ++ HL   Q
Sbjct: 173 AISESALYQDQHAFHLSNRTLYLLNILQQLPISKMNHLNIQQ 214

>RECO_STAEQ (Q5HNY1) DNA repair protein recO (Recombination protein O)|
          Length = 253

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -2

Query: 280 SIQVTSLQNSRHTRRXSKISLLXLNLQAKLPIEQLGHLGSNQ 155
           +I  ++L   +H    S  +L  LN+  +LPI ++ HL   Q
Sbjct: 173 AISESALYQDQHAFHLSNRTLYLLNILQQLPISKMNHLNIQQ 214


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.312    0.137    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,484,917
Number of Sequences: 219361
Number of extensions: 730980
Number of successful extensions: 1200
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1200
length of database: 80,573,946
effective HSP length: 70
effective length of database: 65,218,676
effective search space used: 1565248224
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)