| Clone Name | bags37f19 |
|---|---|
| Clone Library Name | barley_pub |
>CYTL_TACTR (Q7M429) L-cystatin precursor| Length = 133 Score = 39.3 bits (90), Expect = 0.003 Identities = 19/45 (42%), Positives = 29/45 (64%) Frame = +2 Query: 26 GWRDVPVHDPXVKDAASHAVKSIQERSNSLFPXELIEIVRAKAEV 160 GW D V D VK+AA A ++ RSNSL+ +L++I +A+ +V Sbjct: 24 GWIDANVGDTDVKEAARFATEAQSSRSNSLYHHKLLKIHKARTQV 68
>CYTC_BOVIN (P01035) Cystatin C precursor (Colostrum thiol proteinase| inhibitor) Length = 148 Score = 33.5 bits (75), Expect = 0.14 Identities = 15/52 (28%), Positives = 27/52 (51%) Frame = +2 Query: 26 GWRDVPVHDPXVKDAASHAVKSIQERSNSLFPXELIEIVRAKAEVXEDFXKF 181 G + V++ V++A S AV +RSN + ++ +VRA+ +V F Sbjct: 41 GLMEADVNEEGVQEALSFAVSEFNKRSNDAYQSRVVRVVRARKQVVSGMNYF 92
>KNT1_RAT (P01048) T-kininogen 1 precursor (T-kininogen I) (Major acute phase| protein) (Alpha-1-MAP) (Thiostatin) [Contains: T-kininogen 1 heavy chain (T-kininogen I heavy chain); T-kinin; T-kininogen 1 light chain (T-kininogen I light chain)] Length = 430 Score = 31.6 bits (70), Expect = 0.53 Identities = 11/43 (25%), Positives = 26/43 (60%) Frame = +2 Query: 32 RDVPVHDPXVKDAASHAVKSIQERSNSLFPXELIEIVRAKAEV 160 R++PV P +K+A H++ + + N +F ++ + +A ++V Sbjct: 268 REIPVDSPELKEALGHSIAQLNAQHNHIFYFKIDTVKKATSQV 310
>NFM_HUMAN (P07197) Neurofilament triplet M protein (160 kDa neurofilament| protein) (Neurofilament medium polypeptide) (NF-M) (Neurofilament 3) Length = 915 Score = 31.2 bits (69), Expect = 0.70 Identities = 20/75 (26%), Positives = 35/75 (46%) Frame = +2 Query: 20 EPGWRDVPVHDPXVKDAASHAVKSIQERSNSLFPXELIEIVRAKAEVXEDFXKFDIVMKL 199 E G VP K + + ++E++ S P +E ++KAEV + K + ++ Sbjct: 649 EKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEV 708 Query: 200 KRGTKEEKMKAXVHK 244 K KEEK++ K Sbjct: 709 KEAPKEEKVEKKEEK 723
>KNT2_RAT (P08932) T-kininogen 2 precursor (T-kininogen II) (Major acute| phase protein) (Alpha-1-MAP) (Thiostatin) [Contains: T-kininogen 2 heavy chain (T-kininogen II heavy chain); T-kinin; T-kininogen 2 light chain (T-kininogen I light chain)] Length = 430 Score = 30.8 bits (68), Expect = 0.91 Identities = 11/43 (25%), Positives = 26/43 (60%) Frame = +2 Query: 32 RDVPVHDPXVKDAASHAVKSIQERSNSLFPXELIEIVRAKAEV 160 +++PV P +K+A H++ + + N LF ++ + +A ++V Sbjct: 268 KNIPVDSPELKEALGHSIAQLNAQHNHLFYFKIDTVKKATSQV 310
>KNG1_RAT (P08934) Kininogen-1 precursor [Contains: Kininogen-1 heavy chain;| Bradykinin; Kininogen-1 light chain] Length = 639 Score = 30.4 bits (67), Expect = 1.2 Identities = 11/43 (25%), Positives = 25/43 (58%) Frame = +2 Query: 32 RDVPVHDPXVKDAASHAVKSIQERSNSLFPXELIEIVRAKAEV 160 R++PV P +K+A H++ + +N F ++ + +A ++V Sbjct: 269 RNIPVDSPELKEALGHSIAQLNAENNHTFYFKIDTVKKATSQV 311
>CYTM_HUMAN (Q15828) Cystatin M precursor (Cystatin E)| Length = 149 Score = 29.3 bits (64), Expect = 2.6 Identities = 15/43 (34%), Positives = 25/43 (58%) Frame = +2 Query: 32 RDVPVHDPXVKDAASHAVKSIQERSNSLFPXELIEIVRAKAEV 160 RD+ DP V+ AA AV S SNS++ I++A++++ Sbjct: 39 RDLSPDDPQVQKAAQAAVASYNMGSNSIYYFRDTHIIKAQSQL 81
>SC5A6_RAT (O70247) Sodium-dependent multivitamin transporter (Na(+)-dependent| multivitamin transporter) Length = 634 Score = 28.9 bits (63), Expect = 3.5 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 9/81 (11%) Frame = -3 Query: 219 SSFVPLFSFMTISNLXKSSXTSAFARTISISSXGKREFDLSWIDFTAW---------LAA 67 SSF+P SNL ++ T+ T+S + ++ + LS++ ++A L Sbjct: 491 SSFLP-------SNLTVATVTTLMPSTLSKPTGLQQFYSLSYLWYSAHNSTTVIAVGLIV 543 Query: 66 SLTXGSCTGTSRHPGSCPPLL 4 SL G G S +PG+ P+L Sbjct: 544 SLLTGGMRGRSLNPGTIYPVL 564
>FIT1_YEAST (Q04433) Facilitator of iron transport 1 precursor| Length = 528 Score = 28.9 bits (63), Expect = 3.5 Identities = 19/48 (39%), Positives = 23/48 (47%) Frame = -3 Query: 267 STKAPSRFLCTSAFIFSSFVPLFSFMTISNLXKSSXTSAFARTISISS 124 S +A S +SA SS VP FS T N S TSA + + SS Sbjct: 383 SVQASSPIETSSAAKTSSVVPTFSSTTTENSSNSKSTSAVVASTTTSS 430
>CRL_ECOLI (P24251) Curlin genes transcriptional activatory protein| Length = 132 Score = 28.9 bits (63), Expect = 3.5 Identities = 14/48 (29%), Positives = 22/48 (45%) Frame = +2 Query: 29 WRDVPVHDPXVKDAASHAVKSIQERSNSLFPXELIEIVRAKAEVXEDF 172 W+ VPV D V + H ++ E+ EL+ + K E +DF Sbjct: 81 WKSVPVKDTEVVERLEHTLREFHEKLR-----ELLTTLNLKLEPADDF 123
>HMDH1_ORYSA (P48019) 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 (EC| 1.1.1.34) (HMG-CoA reductase 1) Length = 509 Score = 28.5 bits (62), Expect = 4.5 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = +2 Query: 143 RAKAEVXEDFXKFDIVMKLKRGTKEEKMKAXVHKNLEGAFV 265 R K+ V E K D+V K+ + T E+ ++ + KNL G+ V Sbjct: 331 RGKSVVCEAIIKGDVVQKVLKTTVEKLVELNIIKNLAGSAV 371
>KNG1_MOUSE (O08677) Kininogen-1 precursor [Contains: Kininogen-1 heavy chain;| Bradykinin; Kininogen-1 light chain] Length = 661 Score = 28.1 bits (61), Expect = 5.9 Identities = 10/43 (23%), Positives = 24/43 (55%) Frame = +2 Query: 32 RDVPVHDPXVKDAASHAVKSIQERSNSLFPXELIEIVRAKAEV 160 RD+PV P +K+ H++ + ++ F ++ + +A ++V Sbjct: 268 RDIPVDSPELKEVLGHSIAQLNAENDHPFYYKIDTVKKATSQV 310
>NAS35_CAEEL (P98060) Zinc metalloproteinase nas-35 precursor (EC 3.4.24.21)| (Nematode astacin 35) (Dumpy protein 31) (Tollish protein 2) Length = 592 Score = 27.7 bits (60), Expect = 7.7 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -3 Query: 99 SWIDFTAWLAASLTXGSCTGTSRHPGSCPP 10 +W ++ W A S T G+C G+ +CPP Sbjct: 492 NWNSWSPWTACSATCGAC-GSRMRTRTCPP 520 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,630,235 Number of Sequences: 219361 Number of extensions: 530201 Number of successful extensions: 1524 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 1468 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1524 length of database: 80,573,946 effective HSP length: 76 effective length of database: 63,902,510 effective search space used: 1533660240 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)