ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags37f19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CYTL_TACTR (Q7M429) L-cystatin precursor 39 0.003
2CYTC_BOVIN (P01035) Cystatin C precursor (Colostrum thiol protei... 33 0.14
3KNT1_RAT (P01048) T-kininogen 1 precursor (T-kininogen I) (Major... 32 0.53
4NFM_HUMAN (P07197) Neurofilament triplet M protein (160 kDa neur... 31 0.70
5KNT2_RAT (P08932) T-kininogen 2 precursor (T-kininogen II) (Majo... 31 0.91
6KNG1_RAT (P08934) Kininogen-1 precursor [Contains: Kininogen-1 h... 30 1.2
7CYTM_HUMAN (Q15828) Cystatin M precursor (Cystatin E) 29 2.6
8SC5A6_RAT (O70247) Sodium-dependent multivitamin transporter (Na... 29 3.5
9FIT1_YEAST (Q04433) Facilitator of iron transport 1 precursor 29 3.5
10CRL_ECOLI (P24251) Curlin genes transcriptional activatory protein 29 3.5
11HMDH1_ORYSA (P48019) 3-hydroxy-3-methylglutaryl-coenzyme A reduc... 28 4.5
12KNG1_MOUSE (O08677) Kininogen-1 precursor [Contains: Kininogen-1... 28 5.9
13NAS35_CAEEL (P98060) Zinc metalloproteinase nas-35 precursor (EC... 28 7.7

>CYTL_TACTR (Q7M429) L-cystatin precursor|
          Length = 133

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 19/45 (42%), Positives = 29/45 (64%)
 Frame = +2

Query: 26  GWRDVPVHDPXVKDAASHAVKSIQERSNSLFPXELIEIVRAKAEV 160
           GW D  V D  VK+AA  A ++   RSNSL+  +L++I +A+ +V
Sbjct: 24  GWIDANVGDTDVKEAARFATEAQSSRSNSLYHHKLLKIHKARTQV 68



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>CYTC_BOVIN (P01035) Cystatin C precursor (Colostrum thiol proteinase|
           inhibitor)
          Length = 148

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 15/52 (28%), Positives = 27/52 (51%)
 Frame = +2

Query: 26  GWRDVPVHDPXVKDAASHAVKSIQERSNSLFPXELIEIVRAKAEVXEDFXKF 181
           G  +  V++  V++A S AV    +RSN  +   ++ +VRA+ +V      F
Sbjct: 41  GLMEADVNEEGVQEALSFAVSEFNKRSNDAYQSRVVRVVRARKQVVSGMNYF 92



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>KNT1_RAT (P01048) T-kininogen 1 precursor (T-kininogen I) (Major acute phase|
           protein) (Alpha-1-MAP) (Thiostatin) [Contains:
           T-kininogen 1 heavy chain (T-kininogen I heavy chain);
           T-kinin; T-kininogen 1 light chain (T-kininogen I light
           chain)]
          Length = 430

 Score = 31.6 bits (70), Expect = 0.53
 Identities = 11/43 (25%), Positives = 26/43 (60%)
 Frame = +2

Query: 32  RDVPVHDPXVKDAASHAVKSIQERSNSLFPXELIEIVRAKAEV 160
           R++PV  P +K+A  H++  +  + N +F  ++  + +A ++V
Sbjct: 268 REIPVDSPELKEALGHSIAQLNAQHNHIFYFKIDTVKKATSQV 310



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>NFM_HUMAN (P07197) Neurofilament triplet M protein (160 kDa neurofilament|
           protein) (Neurofilament medium polypeptide) (NF-M)
           (Neurofilament 3)
          Length = 915

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 20/75 (26%), Positives = 35/75 (46%)
 Frame = +2

Query: 20  EPGWRDVPVHDPXVKDAASHAVKSIQERSNSLFPXELIEIVRAKAEVXEDFXKFDIVMKL 199
           E G   VP      K  +  +   ++E++ S  P   +E  ++KAEV +   K +   ++
Sbjct: 649 EKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEV 708

Query: 200 KRGTKEEKMKAXVHK 244
           K   KEEK++    K
Sbjct: 709 KEAPKEEKVEKKEEK 723



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>KNT2_RAT (P08932) T-kininogen 2 precursor (T-kininogen II) (Major acute|
           phase protein) (Alpha-1-MAP) (Thiostatin) [Contains:
           T-kininogen 2 heavy chain (T-kininogen II heavy chain);
           T-kinin; T-kininogen 2 light chain (T-kininogen I light
           chain)]
          Length = 430

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 11/43 (25%), Positives = 26/43 (60%)
 Frame = +2

Query: 32  RDVPVHDPXVKDAASHAVKSIQERSNSLFPXELIEIVRAKAEV 160
           +++PV  P +K+A  H++  +  + N LF  ++  + +A ++V
Sbjct: 268 KNIPVDSPELKEALGHSIAQLNAQHNHLFYFKIDTVKKATSQV 310



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>KNG1_RAT (P08934) Kininogen-1 precursor [Contains: Kininogen-1 heavy chain;|
           Bradykinin; Kininogen-1 light chain]
          Length = 639

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 11/43 (25%), Positives = 25/43 (58%)
 Frame = +2

Query: 32  RDVPVHDPXVKDAASHAVKSIQERSNSLFPXELIEIVRAKAEV 160
           R++PV  P +K+A  H++  +   +N  F  ++  + +A ++V
Sbjct: 269 RNIPVDSPELKEALGHSIAQLNAENNHTFYFKIDTVKKATSQV 311



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>CYTM_HUMAN (Q15828) Cystatin M precursor (Cystatin E)|
          Length = 149

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +2

Query: 32  RDVPVHDPXVKDAASHAVKSIQERSNSLFPXELIEIVRAKAEV 160
           RD+   DP V+ AA  AV S    SNS++      I++A++++
Sbjct: 39  RDLSPDDPQVQKAAQAAVASYNMGSNSIYYFRDTHIIKAQSQL 81



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>SC5A6_RAT (O70247) Sodium-dependent multivitamin transporter (Na(+)-dependent|
           multivitamin transporter)
          Length = 634

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
 Frame = -3

Query: 219 SSFVPLFSFMTISNLXKSSXTSAFARTISISSXGKREFDLSWIDFTAW---------LAA 67
           SSF+P       SNL  ++ T+    T+S  +  ++ + LS++ ++A          L  
Sbjct: 491 SSFLP-------SNLTVATVTTLMPSTLSKPTGLQQFYSLSYLWYSAHNSTTVIAVGLIV 543

Query: 66  SLTXGSCTGTSRHPGSCPPLL 4
           SL  G   G S +PG+  P+L
Sbjct: 544 SLLTGGMRGRSLNPGTIYPVL 564



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>FIT1_YEAST (Q04433) Facilitator of iron transport 1 precursor|
          Length = 528

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 19/48 (39%), Positives = 23/48 (47%)
 Frame = -3

Query: 267 STKAPSRFLCTSAFIFSSFVPLFSFMTISNLXKSSXTSAFARTISISS 124
           S +A S    +SA   SS VP FS  T  N   S  TSA   + + SS
Sbjct: 383 SVQASSPIETSSAAKTSSVVPTFSSTTTENSSNSKSTSAVVASTTTSS 430



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>CRL_ECOLI (P24251) Curlin genes transcriptional activatory protein|
          Length = 132

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +2

Query: 29  WRDVPVHDPXVKDAASHAVKSIQERSNSLFPXELIEIVRAKAEVXEDF 172
           W+ VPV D  V +   H ++   E+       EL+  +  K E  +DF
Sbjct: 81  WKSVPVKDTEVVERLEHTLREFHEKLR-----ELLTTLNLKLEPADDF 123



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>HMDH1_ORYSA (P48019) 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 (EC|
           1.1.1.34) (HMG-CoA reductase 1)
          Length = 509

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 143 RAKAEVXEDFXKFDIVMKLKRGTKEEKMKAXVHKNLEGAFV 265
           R K+ V E   K D+V K+ + T E+ ++  + KNL G+ V
Sbjct: 331 RGKSVVCEAIIKGDVVQKVLKTTVEKLVELNIIKNLAGSAV 371



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>KNG1_MOUSE (O08677) Kininogen-1 precursor [Contains: Kininogen-1 heavy chain;|
           Bradykinin; Kininogen-1 light chain]
          Length = 661

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 10/43 (23%), Positives = 24/43 (55%)
 Frame = +2

Query: 32  RDVPVHDPXVKDAASHAVKSIQERSNSLFPXELIEIVRAKAEV 160
           RD+PV  P +K+   H++  +   ++  F  ++  + +A ++V
Sbjct: 268 RDIPVDSPELKEVLGHSIAQLNAENDHPFYYKIDTVKKATSQV 310



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>NAS35_CAEEL (P98060) Zinc metalloproteinase nas-35 precursor (EC 3.4.24.21)|
           (Nematode astacin 35) (Dumpy protein 31) (Tollish
           protein 2)
          Length = 592

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 99  SWIDFTAWLAASLTXGSCTGTSRHPGSCPP 10
           +W  ++ W A S T G+C G+     +CPP
Sbjct: 492 NWNSWSPWTACSATCGAC-GSRMRTRTCPP 520


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,630,235
Number of Sequences: 219361
Number of extensions: 530201
Number of successful extensions: 1524
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1524
length of database: 80,573,946
effective HSP length: 76
effective length of database: 63,902,510
effective search space used: 1533660240
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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