Clone Name	bags37f19
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AB223039.1| Triticum aestivum TaMDC1 mRNA for multidomain cy...	484	e-134
2	gb|BT009401.1| Triticum aestivum clone wlm96.pk045.d23:fis, full...	468	e-129
3	ref|NM_188046.1| Oryza sativa (japonica cultivar-group), Ozsa846...	222	5e-55
4	dbj|AK119511.1| Oryza sativa (japonica cultivar-group) cDNA clon...	222	5e-55
5	dbj|AK104155.1| Oryza sativa (japonica cultivar-group) cDNA clon...	222	5e-55
6	dbj|AK073275.1| Oryza sativa (japonica cultivar-group) cDNA clon...	214	1e-52
7	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	143	4e-31
8	dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic D...	143	4e-31
9	emb|AM055633.1| Zea mays mRNA for partial putative cystatin (cc4...	117	2e-23
10	tpe|BN000509.1| TPA: TPA_exp: Zea mays mRNA for putative cystati...	109	5e-21
11	dbj|AP006424.1| Lotus japonicus genomic DNA, chromosome 6, clone...	48	0.016
12	gb|AC120132.11| Mus musculus chromosome 6, clone RP23-105D1, com...	46	0.064
13	gb|AF410861.1| Woodchuck hepatitis B virus isolate 342 polymeras...	44	0.25
14	gb|AF410860.1| Woodchuck hepatitis B virus isolate 335 clone b p...	44	0.25
15	gb|AF410859.1| Woodchuck hepatitis B virus isolate 335 polymeras...	44	0.25
16	gb|AF410858.1| Woodchuck hepatitis B virus isolate 342 defective...	44	0.25
17	gb|AF410857.1| Woodchuck hepatitis B virus isolate 335 type I mu...	44	0.25
18	gb|AF410856.1| Woodchuck hepatitis B virus isolate 331 type IV m...	44	0.25
19	gb|AF410855.1| Woodchuck hepatitis B virus isolate 331 type II m...	44	0.25
20	emb|AL138778.13| Human DNA sequence from clone RP11-57K16 on chr...	44	0.25
21	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	44	0.25
22	dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic D...	44	0.25
23	dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic D...	44	0.25
24	gb|M15954.1|OHVSAGA Woodchuck hepatitis virus mRNA encoding surf...	44	0.25
25	gb|M18752.1|OHVCGD Woodchuck hepatitis virus (WHV), complete gen...	44	0.25
26	gb|M19183.1|OHVCGC Woodchuck hepatitis virus (WHV), complete gen...	44	0.25
27	gb|M60766.1|MARB7 Woodchuck hepatitis virus surface antigen (pre...	44	0.25
28	gb|AY468486.1| Lentiviral transfer vector pHsCXW, complete sequence	42	1.0
29	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	42	1.0
30	gb|J04514.1|OHVHEPBA Woodchuck hepatitis B virus (WHV8), complet...	42	1.0
31	gb|M11082.1|OHVCGB Woodchuck hepatitis virus 2, complete genome	42	1.0
32	gb|AC151753.1| Ornithorhynchus anatinus chromosome UNK clone OAB...	40	4.0
33	emb|CT010434.8| Mouse DNA sequence from clone RP23-225H9 on chro...	40	4.0
34	emb|AL390840.17| Human DNA sequence from clone RP13-213K19 on ch...	40	4.0
35	emb|AL121834.20|HSJ509I19 Human DNA sequence from clone RP3-509I...	40	4.0
36	emb|AL121952.18|HSDJ472M2 Human DNA sequence from clone RP3-472M...	40	4.0
37	gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome	40	4.0
38	gb|AC114788.4| Homo sapiens BAC clone RP11-648F7 from 2, complet...	40	4.0
39	gb|AC009414.4| Homo sapiens BAC clone RP11-490M8 from 2, complet...	40	4.0
40	emb|AL772237.12| Mouse DNA sequence from clone RP23-14I13 on chr...	40	4.0

---

>dbj|AB223039.1| Triticum aestivum TaMDC1 mRNA for multidomain cystatin, complete
           cds
          Length = 1031

 Score =  484 bits (244), Expect = e-134
 Identities = 286/302 (94%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgccaagagagggggacatgagcctggatggcgtgatgtgcctgtgcatgatcctgnagt 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 477 cgccaagagagggggacatgagcctggatggcgtgatgtgcctgtgcatgatcctgtagt 536

                                                                       
Query: 61  caaagatgctgcaagccatgctgtgaaatcaatccaggagaggtcgaattcccttttccc 120
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 537 caaagatgctgcaagccatgctgtgaaatcaatccagcagaggtcgaattcccttctccc 596

                                                                       
Query: 121 gnatgaacttattgaaatcgttcgcgcaaaggctgaggttgntgaagacttcgncaaatt 180
             |||||||| |||||||||||||||||||||||||||| | ||||||||||| ||| ||
Sbjct: 597 atatgaacttgttgaaatcgttcgcgcaaaggctgaggtggttgaagacttcgccaagtt 656

                                                                       
Query: 181 tgatatcgtcatgaaactgaagagagggacaaaggaggagaaaatgaaagccgangtgca 240
           ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 657 tgatatcctcatgaaactgaagagagggaccaaggaggagaaaatgaaagccgaggtgca 716

                                                                       
Query: 241 taagaaccttgagggagcttttgtgctgaaccagatgcanccggagcatgacgaatctag 300
           ||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 717 taagaacctcgagggagcttttgtgctgaaccagatgcagccagagcatgacgaatctag 776

             
Query: 301 ca 302
           ||
Sbjct: 777 ca 778

---

>gb|BT009401.1| Triticum aestivum clone wlm96.pk045.d23:fis, full insert mRNA
           sequence
          Length = 1149

 Score =  468 bits (236), Expect = e-129
 Identities = 284/302 (94%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgccaagagagggggacatgagcctggatggcgtgatgtgcctgtgcatgatcctgnagt 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 562 cgccaagagagggggacatgagcctggatggcgtgatgtgcctgtgcatgatcctgtagt 621

                                                                       
Query: 61  caaagatgctgcaagccatgctgtgaaatcaatccaggagaggtcgaattcccttttccc 120
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 622 caaagatgctgcaagccatgctgtgaaatcaatccagcagaggtcgaattcccttctccc 681

                                                                       
Query: 121 gnatgaacttattgaaatcgttcgcgcaaaggctgaggttgntgaagacttcgncaaatt 180
             |||||||| ||||||||||||| |||||||||||||| | |||||||||||  || ||
Sbjct: 682 atatgaacttgttgaaatcgttcgtgcaaaggctgaggtggttgaagacttcgcgaagtt 741

                                                                       
Query: 181 tgatatcgtcatgaaactgaagagagggacaaaggaggagaaaatgaaagccgangtgca 240
           ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 742 tgatatcctcatgaaactgaagagagggaccaaggaggagaaaatgaaagccgaggtgca 801

                                                                       
Query: 241 taagaaccttgagggagcttttgtgctgaaccagatgcanccggagcatgacgaatctag 300
           ||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 802 taagaacctcgagggagcttttgtgctgaaccagatgcagccagagcatgacgaatctag 861

             
Query: 301 ca 302
           ||
Sbjct: 862 ca 863

---

>ref|NM_188046.1| Oryza sativa (japonica cultivar-group), Ozsa8466 predicted mRNA
          Length = 753

 Score =  222 bits (112), Expect = 5e-55
 Identities = 253/302 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgccaagagagggggacatgagcctggatggcgtgatgtgcctgtgcatgatcctgnagt 60
           |||||||| ||| |||||||||||||| ||||||||||| || || |||||||||| |||
Sbjct: 444 cgccaagaaaggtggacatgagcctgggtggcgtgatgttccagtacatgatcctgtagt 503

                                                                       
Query: 61  caaagatgctgcaagccatgctgtgaaatcaatccaggagaggtcgaattcccttttccc 120
           |||||||||||||  |||||||||||||||||||||| ||||||| || ||||| || ||
Sbjct: 504 caaagatgctgcagaccatgctgtgaaatcaatccagcagaggtcaaactccctgtttcc 563

                                                                       
Query: 121 gnatgaacttattgaaatcgttcgcgcaaaggctgaggttgntgaagacttcgncaaatt 180
             |||||||| | || |||||||| |||||||| ||||||| |||||||||||  || ||
Sbjct: 564 atatgaacttctcgagatcgttcgtgcaaaggcagaggttgttgaagacttcgcaaagtt 623

                                                                       
Query: 181 tgatatcgtcatgaaactgaagagagggacaaaggaggagaaaatgaaagccgangtgca 240
           ||| ||  | |||||||| ||||| || |  |||||||||||  | |||||||| || ||
Sbjct: 624 tgacattctgatgaaacttaagaggggaaacaaggaggagaagttcaaagccgaggtcca 683

                                                                       
Query: 241 taagaaccttgagggagcttttgtgctgaaccagatgcanccggagcatgacgaatctag 300
            ||||||||||| || || ||||| |||||||||||||| |  |||||||| ||||| ||
Sbjct: 684 caagaaccttgaaggggcatttgtactgaaccagatgcaacaagagcatgatgaatcgag 743

             
Query: 301 ca 302
           ||
Sbjct: 744 ca 745

---

>dbj|AK119511.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C04, full
           insert sequence
          Length = 1095

 Score =  222 bits (112), Expect = 5e-55
 Identities = 253/302 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgccaagagagggggacatgagcctggatggcgtgatgtgcctgtgcatgatcctgnagt 60
           |||||||| ||| |||||||||||||| ||||||||||| || || |||||||||| |||
Sbjct: 542 cgccaagaaaggtggacatgagcctgggtggcgtgatgttccagtacatgatcctgtagt 601

                                                                       
Query: 61  caaagatgctgcaagccatgctgtgaaatcaatccaggagaggtcgaattcccttttccc 120
           |||||||||||||  |||||||||||||||||||||| ||||||| || ||||| || ||
Sbjct: 602 caaagatgctgcagaccatgctgtgaaatcaatccagcagaggtcaaactccctgtttcc 661

                                                                       
Query: 121 gnatgaacttattgaaatcgttcgcgcaaaggctgaggttgntgaagacttcgncaaatt 180
             |||||||| | || |||||||| |||||||| ||||||| |||||||||||  || ||
Sbjct: 662 atatgaacttctcgagatcgttcgtgcaaaggcagaggttgttgaagacttcgcaaagtt 721

                                                                       
Query: 181 tgatatcgtcatgaaactgaagagagggacaaaggaggagaaaatgaaagccgangtgca 240
           ||| ||  | |||||||| ||||| || |  |||||||||||  | |||||||| || ||
Sbjct: 722 tgacattttgatgaaacttaagaggggaaacaaggaggagaagttcaaagccgaggtcca 781

                                                                       
Query: 241 taagaaccttgagggagcttttgtgctgaaccagatgcanccggagcatgacgaatctag 300
            ||||||||||| || || ||||| |||||||||||||| |  |||||||| ||||| ||
Sbjct: 782 caagaaccttgaaggggcatttgtactgaaccagatgcaacaagagcatgatgaatcgag 841

             
Query: 301 ca 302
           ||
Sbjct: 842 ca 843

---

>dbj|AK104155.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-B08, full
           insert sequence
          Length = 1023

 Score =  222 bits (112), Expect = 5e-55
 Identities = 253/302 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgccaagagagggggacatgagcctggatggcgtgatgtgcctgtgcatgatcctgnagt 60
           |||||||| ||| |||||||||||||| ||||||||||| || || |||||||||| |||
Sbjct: 440 cgccaagaaaggtggacatgagcctgggtggcgtgatgttccagtacatgatcctgtagt 499

                                                                       
Query: 61  caaagatgctgcaagccatgctgtgaaatcaatccaggagaggtcgaattcccttttccc 120
           |||||||||||||  |||||||||||||||||||||| ||||||| || ||||| || ||
Sbjct: 500 caaagatgctgcagaccatgctgtgaaatcaatccagcagaggtcaaactccctgtttcc 559

                                                                       
Query: 121 gnatgaacttattgaaatcgttcgcgcaaaggctgaggttgntgaagacttcgncaaatt 180
             |||||||| | || |||||||| |||||||| ||||||| |||||||||||  || ||
Sbjct: 560 atatgaacttctcgagatcgttcgtgcaaaggcagaggttgttgaagacttcgcaaagtt 619

                                                                       
Query: 181 tgatatcgtcatgaaactgaagagagggacaaaggaggagaaaatgaaagccgangtgca 240
           ||| ||  | |||||||| ||||| || |  |||||||||||  | |||||||| || ||
Sbjct: 620 tgacattctgatgaaacttaagaggggaaacaaggaggagaagttcaaagccgaggtcca 679

                                                                       
Query: 241 taagaaccttgagggagcttttgtgctgaaccagatgcanccggagcatgacgaatctag 300
            ||||||||||| || || ||||| |||||||||||||| |  |||||||| ||||| ||
Sbjct: 680 caagaaccttgaaggggcatttgtactgaaccagatgcaacaagagcatgatgaatcgag 739

             
Query: 301 ca 302
           ||
Sbjct: 740 ca 741

---

>dbj|AK073275.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025K21, full
           insert sequence
          Length = 1095

 Score =  214 bits (108), Expect = 1e-52
 Identities = 252/302 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgccaagagagggggacatgagcctggatggcgtgatgtgcctgtgcatgatcctgnagt 60
           |||||||| ||| |||||||||||||| ||||||||||| || || |||||||||| |||
Sbjct: 537 cgccaagaaaggtggacatgagcctgggtggcgtgatgttccagtacatgatcctgtagt 596

                                                                       
Query: 61  caaagatgctgcaagccatgctgtgaaatcaatccaggagaggtcgaattcccttttccc 120
           |||||||||||||  |||||||||||||||||||||| ||||||| || ||||| || ||
Sbjct: 597 caaagatgctgcagaccatgctgtgaaatcaatccagcagaggtcaaactccctgtttcc 656

                                                                       
Query: 121 gnatgaacttattgaaatcgttcgcgcaaaggctgaggttgntgaagacttcgncaaatt 180
             ||||||||   || |||||||| |||||||| ||||||| |||||||||||  || ||
Sbjct: 657 atatgaacttcccgagatcgttcgtgcaaaggcagaggttgttgaagacttcgcaaagtt 716

                                                                       
Query: 181 tgatatcgtcatgaaactgaagagagggacaaaggaggagaaaatgaaagccgangtgca 240
           ||| ||  | |||||||| ||||| || |  |||||||||||  | |||||||| || ||
Sbjct: 717 tgacattctgatgaaacttaagaggggaaacaaggaggagaagttcaaagccgaggtcca 776

                                                                       
Query: 241 taagaaccttgagggagcttttgtgctgaaccagatgcanccggagcatgacgaatctag 300
            ||||||||||| || || ||||| |||||||||||||| |  |||||||| ||||| ||
Sbjct: 777 caagaaccttgaaggggcatttgtactgaaccagatgcaacaagagcatgatgaatcgag 836

             
Query: 301 ca 302
           ||
Sbjct: 837 ca 838

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  143 bits (72), Expect = 4e-31
 Identities = 127/146 (86%)
 Strand = Plus / Minus

                                                                           
Query: 14      ggacatgagcctggatggcgtgatgtgcctgtgcatgatcctgnagtcaaagatgctgca 73
               |||||||||||||| ||||||||||| || || |||||||||| ||||||||||||||||
Sbjct: 9325568 ggacatgagcctgggtggcgtgatgttccagtacatgatcctgtagtcaaagatgctgca 9325509

                                                                           
Query: 74      agccatgctgtgaaatcaatccaggagaggtcgaattcccttttcccgnatgaacttatt 133
                 |||||||||||||||||||||| ||||||| || ||||| || ||  |||||||| | 
Sbjct: 9325508 gaccatgctgtgaaatcaatccagcagaggtcaaactccctgtttccatatgaacttctc 9325449

                                         
Query: 134     gaaatcgttcgcgcaaaggctgaggt 159
               || |||||||| |||||||| |||||
Sbjct: 9325448 gagatcgttcgtgcaaaggcagaggt 9325423



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 119/147 (80%)
 Strand = Plus / Minus

                                                                           
Query: 156     aggttgntgaagacttcgncaaatttgatatcgtcatgaaactgaagagagggacaaagg 215
               |||||| |||||||||||  || ||||| ||  | |||||||| ||||| || |  ||||
Sbjct: 9325073 aggttgttgaagacttcgcaaagtttgacattctgatgaaacttaagaggggaaacaagg 9325014

                                                                           
Query: 216     aggagaaaatgaaagccgangtgcataagaaccttgagggagcttttgtgctgaaccaga 275
               |||||||  | |||||||| || || ||||||||||| || || ||||| ||||||||||
Sbjct: 9325013 aggagaagttcaaagccgaggtccacaagaaccttgaaggggcatttgtactgaaccaga 9324954

                                          
Query: 276     tgcanccggagcatgacgaatctagca 302
               |||| |  |||||||| ||||| ||||
Sbjct: 9324953 tgcaacaagagcatgatgaatcgagca 9324927

---

>dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0667A10
          Length = 152237

 Score =  143 bits (72), Expect = 4e-31
 Identities = 127/146 (86%)
 Strand = Plus / Minus

                                                                          
Query: 14     ggacatgagcctggatggcgtgatgtgcctgtgcatgatcctgnagtcaaagatgctgca 73
              |||||||||||||| ||||||||||| || || |||||||||| ||||||||||||||||
Sbjct: 102162 ggacatgagcctgggtggcgtgatgttccagtacatgatcctgtagtcaaagatgctgca 102103

                                                                          
Query: 74     agccatgctgtgaaatcaatccaggagaggtcgaattcccttttcccgnatgaacttatt 133
                |||||||||||||||||||||| ||||||| || ||||| || ||  |||||||| | 
Sbjct: 102102 gaccatgctgtgaaatcaatccagcagaggtcaaactccctgtttccatatgaacttctc 102043

                                        
Query: 134    gaaatcgttcgcgcaaaggctgaggt 159
              || |||||||| |||||||| |||||
Sbjct: 102042 gagatcgttcgtgcaaaggcagaggt 102017



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 119/147 (80%)
 Strand = Plus / Minus

                                                                          
Query: 156    aggttgntgaagacttcgncaaatttgatatcgtcatgaaactgaagagagggacaaagg 215
              |||||| |||||||||||  || ||||| ||  | |||||||| ||||| || |  ||||
Sbjct: 101667 aggttgttgaagacttcgcaaagtttgacattctgatgaaacttaagaggggaaacaagg 101608

                                                                          
Query: 216    aggagaaaatgaaagccgangtgcataagaaccttgagggagcttttgtgctgaaccaga 275
              |||||||  | |||||||| || || ||||||||||| || || ||||| ||||||||||
Sbjct: 101607 aggagaagttcaaagccgaggtccacaagaaccttgaaggggcatttgtactgaaccaga 101548

                                         
Query: 276    tgcanccggagcatgacgaatctagca 302
              |||| |  |||||||| ||||| ||||
Sbjct: 101547 tgcaacaagagcatgatgaatcgagca 101521

---

>emb|AM055633.1| Zea mays mRNA for partial putative cystatin (cc4 gene)
          Length = 681

 Score =  117 bits (59), Expect = 2e-23
 Identities = 219/274 (79%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgccaagagagggggacatgagcctggatggcgtgatgtgcctgtgcatgatcctgnagt 60
           |||||||  ||| |||||||||||||| |||||||| || || ||  | |||||||  ||
Sbjct: 406 cgccaagcaaggtggacatgagcctggttggcgtgaggttccagtagaggatcctgtggt 465

                                                                       
Query: 61  caaagatgctgcaagccatgctgtgaaatcaatccaggagaggtcgaattcccttttccc 120
           |||||||||||||  ||||||||||||||| ||||| |||||||| || ||||| |||||
Sbjct: 466 caaagatgctgcacaccatgctgtgaaatcgatccaagagaggtccaactccctgttccc 525

                                                                       
Query: 121 gnatgaacttattgaaatcgttcgcgcaaaggctgaggttgntgaagacttcgncaaatt 180
             | |||||| | || ||| |||| ||  | ||  ||||||  |||||||| |  |||||
Sbjct: 526 ctacgaacttctcgagatccttcgtgcccatgcacaggttgtggaagactttgcaaaatt 585

                                                                       
Query: 181 tgatatcgtcatgaaactgaagagagggacaaaggaggagaaaatgaaagccgangtgca 240
           ||| ||  | ||||||||||||||||| |  ||||||||||| || ||||| || || ||
Sbjct: 586 tgacattctgatgaaactgaagagaggcagcaaggaggagaagatcaaagcagaggtcca 645

                                             
Query: 241 taagaaccttgagggagcttttgtgctgaaccag 274
           ||||| ||| || || || |||||||| ||||||
Sbjct: 646 taagagcctggaaggggcctttgtgctaaaccag 679

---

>tpe|BN000509.1| TPA: TPA_exp: Zea mays mRNA for putative cystatin (cc4 gene)
          Length = 1052

 Score =  109 bits (55), Expect = 5e-21
 Identities = 218/274 (79%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgccaagagagggggacatgagcctggatggcgtgatgtgcctgtgcatgatcctgnagt 60
           |||||||  ||| |||||||||||||| |||||||| || || ||  | |||||||  ||
Sbjct: 461 cgccaaggaaggtggacatgagcctggttggcgtgaggttccagtagaggatcctgtggt 520

                                                                       
Query: 61  caaagatgctgcaagccatgctgtgaaatcaatccaggagaggtcgaattcccttttccc 120
           |||||||||||||  ||||||||||||||| ||||| |||||||| || ||||| || ||
Sbjct: 521 caaagatgctgcacaccatgctgtgaaatcgatccaagagaggtccaactccctgtttcc 580

                                                                       
Query: 121 gnatgaacttattgaaatcgttcgcgcaaaggctgaggttgntgaagacttcgncaaatt 180
             | |||||| | || ||| |||| ||  | ||  ||||||  |||||||| |  |||||
Sbjct: 581 ctacgaacttctcgagatccttcgtgcccatgcacaggttgtggaagactttgcaaaatt 640

                                                                       
Query: 181 tgatatcgtcatgaaactgaagagagggacaaaggaggagaaaatgaaagccgangtgca 240
           ||| ||  | ||||||||||||||||| |  ||||||||||| || ||||| || || ||
Sbjct: 641 tgacattctgatgaaactgaagagaggcagcaaggaggagaagatcaaagctgaggtcca 700

                                             
Query: 241 taagaaccttgagggagcttttgtgctgaaccag 274
           ||||| ||| || || || |||||||| ||||||
Sbjct: 701 taagagcctggaaggggcctttgtgctaaaccag 734

---

>dbj|AP006424.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT13E04, TM0314,
             complete sequence
          Length = 126349

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 188   gtcatgaaactgaagagagggaca 211
             ||||||||||||||||||||||||
Sbjct: 68195 gtcatgaaactgaagagagggaca 68172

---

>gb|AC120132.11| Mus musculus chromosome 6, clone RP23-105D1, complete sequence
          Length = 203185

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 201   agagagggacaaaggaggagaaaatga 227
             |||||||||||||||||||| ||||||
Sbjct: 78820 agagagggacaaaggaggaggaaatga 78794

---

>gb|AF410861.1| Woodchuck hepatitis B virus isolate 342 polymerase gene, complete cds
          Length = 2655

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 212  aaggaggagaaaatgaaagccg 233
            ||||||||||||||||||||||
Sbjct: 2132 aaggaggagaaaatgaaagccg 2111

---

>gb|AF410860.1| Woodchuck hepatitis B virus isolate 335 clone b polymerase gene,
            complete cds
          Length = 2655

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 212  aaggaggagaaaatgaaagccg 233
            ||||||||||||||||||||||
Sbjct: 2132 aaggaggagaaaatgaaagccg 2111

---

>gb|AF410859.1| Woodchuck hepatitis B virus isolate 335 polymerase gene, complete cds
          Length = 2655

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 212  aaggaggagaaaatgaaagccg 233
            ||||||||||||||||||||||
Sbjct: 2132 aaggaggagaaaatgaaagccg 2111

---

>gb|AF410858.1| Woodchuck hepatitis B virus isolate 342 defective polymerase gene,
            complete cds
          Length = 2649

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 212  aaggaggagaaaatgaaagccg 233
            ||||||||||||||||||||||
Sbjct: 2126 aaggaggagaaaatgaaagccg 2105

---

>gb|AF410857.1| Woodchuck hepatitis B virus isolate 335 type I mutant polymerase
            gene, complete cds
          Length = 2655

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 212  aaggaggagaaaatgaaagccg 233
            ||||||||||||||||||||||
Sbjct: 2132 aaggaggagaaaatgaaagccg 2111

---

>gb|AF410856.1| Woodchuck hepatitis B virus isolate 331 type IV mutant polymerase
            gene, complete cds
          Length = 2655

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 212  aaggaggagaaaatgaaagccg 233
            ||||||||||||||||||||||
Sbjct: 2132 aaggaggagaaaatgaaagccg 2111

---

>gb|AF410855.1| Woodchuck hepatitis B virus isolate 331 type II mutant polymerase
            gene, complete cds
          Length = 2655

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 212  aaggaggagaaaatgaaagccg 233
            ||||||||||||||||||||||
Sbjct: 2132 aaggaggagaaaatgaaagccg 2111

---

>emb|AL138778.13| Human DNA sequence from clone RP11-57K16 on chromosome 1q31.1-31.3,
              complete sequence
          Length = 167857

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 197    ctgaagagagggacaaaggagg 218
              ||||||||||||||||||||||
Sbjct: 163754 ctgaagagagggacaaaggagg 163775

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 198      tgaagagagggacaaaggagga 219
                ||||||||||||||||||||||
Sbjct: 12342372 tgaagagagggacaaaggagga 12342351

---

>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1168F12
          Length = 141524

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 198    tgaagagagggacaaaggagga 219
              ||||||||||||||||||||||
Sbjct: 125926 tgaagagagggacaaaggagga 125905

---

>dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0599F09
          Length = 157415

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 198  tgaagagagggacaaaggagga 219
            ||||||||||||||||||||||
Sbjct: 7956 tgaagagagggacaaaggagga 7935

---

>gb|M15954.1|OHVSAGA Woodchuck hepatitis virus mRNA encoding surface antigen, complete
            cds, polymerase, 3' end, and cor protein, 5' end
          Length = 1973

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 212  aaggaggagaaaatgaaagccg 233
            ||||||||||||||||||||||
Sbjct: 1150 aaggaggagaaaatgaaagccg 1129

---

>gb|M18752.1|OHVCGD Woodchuck hepatitis virus (WHV), complete genome, clone WHV 7
          Length = 3323

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 212  aaggaggagaaaatgaaagccg 233
            ||||||||||||||||||||||
Sbjct: 1235 aaggaggagaaaatgaaagccg 1214

---

>gb|M19183.1|OHVCGC Woodchuck hepatitis virus (WHV), complete genome, clone WHV 59
          Length = 3323

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 212  aaggaggagaaaatgaaagccg 233
            ||||||||||||||||||||||
Sbjct: 1235 aaggaggagaaaatgaaagccg 1214

---

>gb|M60766.1|MARB7 Woodchuck hepatitis virus surface antigen (preS) and X protein genes
          Length = 7808

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 212  aaggaggagaaaatgaaagccg 233
            ||||||||||||||||||||||
Sbjct: 4767 aaggaggagaaaatgaaagccg 4746

---

>gb|AY468486.1| Lentiviral transfer vector pHsCXW, complete sequence
          Length = 7207

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 212  aaggaggagaaaatgaaagcc 232
            |||||||||||||||||||||
Sbjct: 2863 aaggaggagaaaatgaaagcc 2843

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 205      agggacaaaggaggagaaaatgaaa 229
                |||||||||| ||||||||||||||
Sbjct: 11926542 agggacaaagaaggagaaaatgaaa 11926566

---

>gb|J04514.1|OHVHEPBA Woodchuck hepatitis B virus (WHV8), complete genome
          Length = 3323

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 212  aaggaggagaaaatgaaagcc 232
            |||||||||||||||||||||
Sbjct: 1235 aaggaggagaaaatgaaagcc 1215

---

>gb|M11082.1|OHVCGB Woodchuck hepatitis virus 2, complete genome
          Length = 3320

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 212  aaggaggagaaaatgaaagcc 232
            |||||||||||||||||||||
Sbjct: 1235 aaggaggagaaaatgaaagcc 1215

---

>gb|AC151753.1| Ornithorhynchus anatinus chromosome UNK clone OABb-467P24, complete
             sequence
          Length = 143764

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   tgaaactgaagagagggaca 211
             ||||||||||||||||||||
Sbjct: 47079 tgaaactgaagagagggaca 47098

---

>emb|CT010434.8| Mouse DNA sequence from clone RP23-225H9 on chromosome 17, complete
              sequence
          Length = 218000

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 200    aagagagggacaaaggaggagaaa 223
              |||||||||| |||||||||||||
Sbjct: 146053 aagagagggagaaaggaggagaaa 146030

---

>emb|AL390840.17| Human DNA sequence from clone RP13-213K19 on chromosome X Contains a
              tubulin beta polypeptide pseudogene, complete sequence
          Length = 197611

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    tttgatatcgtcatgaaact 198
              ||||||||||||||||||||
Sbjct: 112558 tttgatatcgtcatgaaact 112539

---

>emb|AL121834.20|HSJ509I19 Human DNA sequence from clone RP3-509I19 on chromosome 6q23.1-24.1
              Contains a novel gene (includes DKFZP586D0623), the gene
              for a novel protein similar to mouse f-box only protein 16
              (Fbxo16) (Fbx16), a novel 7 transmembrane receptor
              (rhodopsin family) pseudogene similar to CCRL1, a novel
              gene, a suppressor of mif two 3 homolog 2 (yeast) (SMT3H2)
              pseudogene, the REPS1 gene for RALBP1 associated Eps domain
              containing 1 and two CpG islands, complete sequence
          Length = 178159

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 208    gacaaaggaggagaaaatgaaagc 231
              ||||||||||| ||||||||||||
Sbjct: 101315 gacaaaggaggggaaaatgaaagc 101338

---

>emb|AL121952.18|HSDJ472M2 Human DNA sequence from clone RP3-472M2 on chromosome 6q25.1-26
            Contains the 3' end of the gene for KIAA1116 and a
            ribosomal protein L17 (60S ribosomal protein L17)
            (RPL17)(rpL17) pseudogene, complete sequence
          Length = 107506

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 201  agagagggacaaaggaggagaaaatgaa 228
            |||||||||||| ||||||||| |||||
Sbjct: 8946 agagagggacaagggaggagaagatgaa 8919

---

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 64      agatgctgcaagccatgctg 83
               ||||||||||||||||||||
Sbjct: 2693101 agatgctgcaagccatgctg 2693120

---

>gb|AC114788.4| Homo sapiens BAC clone RP11-648F7 from 2, complete sequence
          Length = 116951

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 209   acaaaggaggagaaaatgaaagcc 232
             |||||||||||||| |||||||||
Sbjct: 66853 acaaaggaggagaagatgaaagcc 66830

---

>gb|AC009414.4| Homo sapiens BAC clone RP11-490M8 from 2, complete sequence
          Length = 137557

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   aaggaggagaaaatgaaagc 231
             ||||||||||||||||||||
Sbjct: 61347 aaggaggagaaaatgaaagc 61328

---

>emb|AL772237.12| Mouse DNA sequence from clone RP23-14I13 on chromosome 4, complete
             sequence
          Length = 169452

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 196   actgaagagagggacaaaggagga 219
             ||||||||||||||||| ||||||
Sbjct: 36663 actgaagagagggacaatggagga 36686


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,397,427
Number of Sequences: 3902068
Number of extensions: 2397427
Number of successful extensions: 49536
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49439
Number of HSP's gapped (non-prelim): 97
length of query: 302
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 280
effective length of database: 17,147,199,772
effective search space: 4801215936160
effective search space used: 4801215936160
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---