ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags37f08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479931.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1236 Score = 569 bits (287), Expect = e-159 Identities = 434/483 (89%) Strand = Plus / Plus Query: 2 tgttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttctt 61 |||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| Sbjct: 492 tgttgatgtggtggttccccctggcaacactggtctggatccatcccagacctctttctt 551 Query: 62 ccaggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagt 121 ||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| || Sbjct: 552 ccaggtgcttaacatccccaccaagattaacaagggtactgtggaaattatcacccctgt 611 Query: 122 ggagctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagct 181 |||||| || |||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 612 ggagctcattaagaagggtgacaaggtgggctcctccgagtctgctctgcttgccaagct 671 Query: 182 tggtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagt 241 |||||||||||||||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 672 tggtatccgccccttctcatatgggctggttattaccaatgtctatgacagtgggtcagt 731 Query: 242 cttcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgcttctgg 301 ||||||||| ||||| ||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 732 cttcagccctgaggtgcttgacctcactgaggatgacctgatggagaagtttgcttctgg 791 Query: 302 tgtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgcacc 361 |||||| |||||||||||| | |||||||| ||||| ||||| || || ||||||||||| Sbjct: 792 tgtttctatggttgcctcagtctccctggcaatctcgtacccaactattgctgctgcacc 851 Query: 362 gcacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagacagactactc 421 |||||||||||||||| ||||||||||| ||||| || ||| ||||||| || ||||| Sbjct: 852 acacatgttcctcaatgggtacaagaatgtgcttgctgttgctgtggagaccgaatactc 911 Query: 422 gtatgaccatgctgataagatcaaggagtacctcaaggacccgagcaagtttgccgttgc 481 ||| ||||||||||||||||||||||| | || ||||| |||||||| || ||||| Sbjct: 912 gtacccacatgctgataagatcaaggagtatttgaaagaccccagcaagttcgctgttgc 971 Query: 482 tgc 484 ||| Sbjct: 972 tgc 974 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 526 ccaaggaggaggagaagaaggaagaacccgaggaggaatcagatgg 571 |||||||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 1016 ccaaggaggaagagaagaaggaagagcccgaggaggagtccgatgg 1061
>dbj|D21130.1|RICYK704 Oryza sativa (japonica cultivar-group) YK704 mRNA for acidic ribosomal protein P0, complete cds Length = 1220 Score = 569 bits (287), Expect = e-159 Identities = 434/483 (89%) Strand = Plus / Plus Query: 2 tgttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttctt 61 |||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| Sbjct: 474 tgttgatgtggtggttccccctggcaacactggtctggatccatcccagacctctttctt 533 Query: 62 ccaggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagt 121 ||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| || Sbjct: 534 ccaggtgcttaacatccccaccaagattaacaagggtactgtggaaattatcacccctgt 593 Query: 122 ggagctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagct 181 |||||| || |||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 594 ggagctcattaagaagggtgacaaggtgggctcctccgagtctgctctgcttgccaagct 653 Query: 182 tggtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagt 241 |||||||||||||||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 654 tggtatccgccccttctcatatgggctggttattaccaatgtctatgacagtgggtcagt 713 Query: 242 cttcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgcttctgg 301 ||||||||| ||||| ||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 714 cttcagccctgaggtgcttgacctcactgaggatgacctgatggagaagtttgcttctgg 773 Query: 302 tgtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgcacc 361 |||||| |||||||||||| | |||||||| ||||| ||||| || || ||||||||||| Sbjct: 774 tgtttctatggttgcctcagtctccctggcaatctcgtacccaactattgctgctgcacc 833 Query: 362 gcacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagacagactactc 421 |||||||||||||||| ||||||||||| ||||| || ||| ||||||| || ||||| Sbjct: 834 acacatgttcctcaatgggtacaagaatgtgcttgctgttgctgtggagaccgaatactc 893 Query: 422 gtatgaccatgctgataagatcaaggagtacctcaaggacccgagcaagtttgccgttgc 481 ||| ||||||||||||||||||||||| | || ||||| |||||||| || ||||| Sbjct: 894 gtacccacatgctgataagatcaaggagtatttgaaagaccccagcaagttcgctgttgc 953 Query: 482 tgc 484 ||| Sbjct: 954 tgc 956 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 526 ccaaggaggaggagaagaaggaagaacccgaggaggaatcagatgg 571 |||||||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 998 ccaaggaggaagagaagaaggaagagcccgaggaggagtccgatgg 1043
>dbj|AK064857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H12, full insert sequence Length = 1236 Score = 569 bits (287), Expect = e-159 Identities = 434/483 (89%) Strand = Plus / Plus Query: 2 tgttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttctt 61 |||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| Sbjct: 492 tgttgatgtggtggttccccctggcaacactggtctggatccatcccagacctctttctt 551 Query: 62 ccaggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagt 121 ||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| || Sbjct: 552 ccaggtgcttaacatccccaccaagattaacaagggtactgtggaaattatcacccctgt 611 Query: 122 ggagctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagct 181 |||||| || |||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 612 ggagctcattaagaagggtgacaaggtgggctcctccgagtctgctctgcttgccaagct 671 Query: 182 tggtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagt 241 |||||||||||||||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 672 tggtatccgccccttctcatatgggctggttattaccaatgtctatgacagtgggtcagt 731 Query: 242 cttcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgcttctgg 301 ||||||||| ||||| ||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 732 cttcagccctgaggtgcttgacctcactgaggatgacctgatggagaagtttgcttctgg 791 Query: 302 tgtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgcacc 361 |||||| |||||||||||| | |||||||| ||||| ||||| || || ||||||||||| Sbjct: 792 tgtttctatggttgcctcagtctccctggcaatctcgtacccaactattgctgctgcacc 851 Query: 362 gcacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagacagactactc 421 |||||||||||||||| ||||||||||| ||||| || ||| ||||||| || ||||| Sbjct: 852 acacatgttcctcaatgggtacaagaatgtgcttgctgttgctgtggagaccgaatactc 911 Query: 422 gtatgaccatgctgataagatcaaggagtacctcaaggacccgagcaagtttgccgttgc 481 ||| ||||||||||||||||||||||| | || ||||| |||||||| || ||||| Sbjct: 912 gtacccacatgctgataagatcaaggagtatttgaaagaccccagcaagttcgctgttgc 971 Query: 482 tgc 484 ||| Sbjct: 972 tgc 974 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 526 ccaaggaggaggagaagaaggaagaacccgaggaggaatcagatgg 571 |||||||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 1016 ccaaggaggaagagaagaaggaagagcccgaggaggagtccgatgg 1061
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 462 bits (233), Expect = e-127 Identities = 350/389 (89%) Strand = Plus / Minus Query: 63 caggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtg 122 |||||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||| Sbjct: 1715190 caggtgcttaacatccccaccaagattaacaagggtactgtggaaattatcacccctgtg 1715131 Query: 123 gagctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagctt 182 ||||| || |||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 1715130 gagctcattaagaagggtgacaaggtgggctcctccgagtctgctctgcttgccaagctt 1715071 Query: 183 ggtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagtc 242 ||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||| Sbjct: 1715070 ggtatccgccccttctcatatgggctggttattaccaatgtctatgacagtgggtcagtc 1715011 Query: 243 ttcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgcttctggt 302 |||||||| ||||| ||||||||||||||||| || |||||||| ||||||||||||||| Sbjct: 1715010 ttcagccctgaggtgcttgacctcactgaggatgacctgatggagaagtttgcttctggt 1714951 Query: 303 gtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgcaccg 362 ||||| |||||||||||| | |||||||| ||||| ||||| || || ||||||||||| Sbjct: 1714950 gtttctatggttgcctcagtctccctggcaatctcgtacccaactattgctgctgcacca 1714891 Query: 363 cacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagacagactactcg 422 |||||||||||||||| ||||||||||| ||||| || ||| ||||||| || |||||| Sbjct: 1714890 cacatgttcctcaatgggtacaagaatgtgcttgctgttgctgtggagaccgaatactcg 1714831 Query: 423 tatgaccatgctgataagatcaaggagta 451 || ||||||||||||||||||||||| Sbjct: 1714830 tacccacatgctgataagatcaaggagta 1714802 Score = 109 bits (55), Expect = 1e-20 Identities = 64/67 (95%) Strand = Plus / Minus Query: 2 tgttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttctt 61 |||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| Sbjct: 1715342 tgttgatgtggtggttccccctggcaacactggtctggatccatcccagacctctttctt 1715283 Query: 62 ccaggtg 68 ||||||| Sbjct: 1715282 ccaggtg 1715276 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 526 ccaaggaggaggagaagaaggaagaacccgaggaggaatcagatgg 571 |||||||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 1714297 ccaaggaggaagagaagaaggaagagcccgaggaggagtccgatgg 1714252
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0582D05 Length = 150483 Score = 462 bits (233), Expect = e-127 Identities = 350/389 (89%) Strand = Plus / Minus Query: 63 caggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtg 122 |||||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||| Sbjct: 114690 caggtgcttaacatccccaccaagattaacaagggtactgtggaaattatcacccctgtg 114631 Query: 123 gagctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagctt 182 ||||| || |||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 114630 gagctcattaagaagggtgacaaggtgggctcctccgagtctgctctgcttgccaagctt 114571 Query: 183 ggtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagtc 242 ||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||| Sbjct: 114570 ggtatccgccccttctcatatgggctggttattaccaatgtctatgacagtgggtcagtc 114511 Query: 243 ttcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgcttctggt 302 |||||||| ||||| ||||||||||||||||| || |||||||| ||||||||||||||| Sbjct: 114510 ttcagccctgaggtgcttgacctcactgaggatgacctgatggagaagtttgcttctggt 114451 Query: 303 gtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgcaccg 362 ||||| |||||||||||| | |||||||| ||||| ||||| || || ||||||||||| Sbjct: 114450 gtttctatggttgcctcagtctccctggcaatctcgtacccaactattgctgctgcacca 114391 Query: 363 cacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagacagactactcg 422 |||||||||||||||| ||||||||||| ||||| || ||| ||||||| || |||||| Sbjct: 114390 cacatgttcctcaatgggtacaagaatgtgcttgctgttgctgtggagaccgaatactcg 114331 Query: 423 tatgaccatgctgataagatcaaggagta 451 || ||||||||||||||||||||||| Sbjct: 114330 tacccacatgctgataagatcaaggagta 114302 Score = 109 bits (55), Expect = 1e-20 Identities = 64/67 (95%) Strand = Plus / Minus Query: 2 tgttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttctt 61 |||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| Sbjct: 114842 tgttgatgtggtggttccccctggcaacactggtctggatccatcccagacctctttctt 114783 Query: 62 ccaggtg 68 ||||||| Sbjct: 114782 ccaggtg 114776 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 526 ccaaggaggaggagaagaaggaagaacccgaggaggaatcagatgg 571 |||||||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 113797 ccaaggaggaagagaagaaggaagagcccgaggaggagtccgatgg 113752
>gb|AC123528.2| Oryza sativa chromosome 11 clone OSJNBa0078E03, complete sequence Length = 149493 Score = 430 bits (217), Expect = e-117 Identities = 346/389 (88%) Strand = Plus / Minus Query: 63 caggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtg 122 |||||||||||||| ||||||||||||||||||||||| |||||||||| || ||| ||| Sbjct: 4568 caggtgcttaacatccccaccaagattaacaagggtaccgtggaaattatcacccctgtg 4509 Query: 123 gagctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagctt 182 ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4508 gagctcattaagaagggtgacaaggttggctcctctgagtctgccctgcttgccaagctt 4449 Query: 183 ggtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagtc 242 ||||||||||||||||||||||| ||||| ||| |||||| || ||||||||||||||| Sbjct: 4448 ggtatccgccccttctcatatgggctggtgatcaccaatgtgtacgacagtgggtcagtc 4389 Query: 243 ttcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgcttctggt 302 |||||||| ||||| || ||||||||||| || || |||||||| |||||||| |||||| Sbjct: 4388 ttcagccctgaggtgctcgacctcactgaagaggacctgatggagaagtttgcatctggt 4329 Query: 303 gtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgcaccg 362 ||||| |||||||||||| |||||||||| ||||||||||| || || |||||||| || Sbjct: 4328 gtttcgatggttgcctcagtgtccctggcaatctcatacccaactattgctgctgcgcca 4269 Query: 363 cacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagacagactactcg 422 |||||||||||||||| ||||||||||| ||||| || ||| ||||||| || ||||| Sbjct: 4268 cacatgttcctcaatgggtacaagaatgtgcttgctgttgctgtggagaccgaatactca 4209 Query: 423 tatgaccatgctgataagatcaaggagta 451 || ||||||||||||||||||||||| Sbjct: 4208 tacccacatgctgataagatcaaggagta 4180 Score = 101 bits (51), Expect = 3e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 2 tgttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttctt 61 |||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||| Sbjct: 4707 tgttgatgtggtggttccccctggaaacactggtctggatccctcccagacttctttctt 4648 Query: 62 ccaggtg 68 |||||| Sbjct: 4647 tcaggtg 4641 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 526 ccaaggaggaggagaagaaggaagaacccgaggagga 562 |||||||||| |||||||||||||| ||||||||||| Sbjct: 3709 ccaaggaggaagagaagaaggaagagcccgaggagga 3673
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 430 bits (217), Expect = e-117 Identities = 346/389 (88%) Strand = Plus / Minus Query: 63 caggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtg 122 |||||||||||||| ||||||||||||||||||||||| |||||||||| || ||| ||| Sbjct: 1648854 caggtgcttaacatccccaccaagattaacaagggtaccgtggaaattatcacccctgtg 1648795 Query: 123 gagctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagctt 182 ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1648794 gagctcattaagaagggtgacaaggttggctcctctgagtctgccctgcttgccaagctt 1648735 Query: 183 ggtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagtc 242 ||||||||||||||||||||||| ||||| ||| |||||| || ||||||||||||||| Sbjct: 1648734 ggtatccgccccttctcatatgggctggtgatcaccaatgtgtacgacagtgggtcagtc 1648675 Query: 243 ttcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgcttctggt 302 |||||||| ||||| || ||||||||||| || || |||||||| |||||||| |||||| Sbjct: 1648674 ttcagccctgaggtgctcgacctcactgaagaggacctgatggagaagtttgcatctggt 1648615 Query: 303 gtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgcaccg 362 ||||| |||||||||||| |||||||||| ||||||||||| || || |||||||| || Sbjct: 1648614 gtttcgatggttgcctcagtgtccctggcaatctcatacccaactattgctgctgcgcca 1648555 Query: 363 cacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagacagactactcg 422 |||||||||||||||| ||||||||||| ||||| || ||| ||||||| || ||||| Sbjct: 1648554 cacatgttcctcaatgggtacaagaatgtgcttgctgttgctgtggagaccgaatactca 1648495 Query: 423 tatgaccatgctgataagatcaaggagta 451 || ||||||||||||||||||||||| Sbjct: 1648494 tacccacatgctgataagatcaaggagta 1648466 Score = 101 bits (51), Expect = 3e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 2 tgttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttctt 61 |||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||| Sbjct: 1648993 tgttgatgtggtggttccccctggaaacactggtctggatccctcccagacttctttctt 1648934 Query: 62 ccaggtg 68 |||||| Sbjct: 1648933 tcaggtg 1648927 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 526 ccaaggaggaggagaagaaggaagaacccgaggagga 562 |||||||||| |||||||||||||| ||||||||||| Sbjct: 1647995 ccaaggaggaagagaagaaggaagagcccgaggagga 1647959 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgc 499 ||||||||||||||||||||| Sbjct: 6304885 tgctgctcctgctgctgctgc 6304865 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tcaaggagtacctcaaggac 461 |||||||||||||||||||| Sbjct: 26815193 tcaaggagtacctcaaggac 26815212
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 430 bits (217), Expect = e-117 Identities = 346/389 (88%) Strand = Plus / Minus Query: 63 caggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtg 122 |||||||||||||| ||||||||||||||||||||||| |||||||||| || ||| ||| Sbjct: 1646575 caggtgcttaacatccccaccaagattaacaagggtaccgtggaaattatcacccctgtg 1646516 Query: 123 gagctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagctt 182 ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1646515 gagctcattaagaagggtgacaaggttggctcctctgagtctgccctgcttgccaagctt 1646456 Query: 183 ggtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagtc 242 ||||||||||||||||||||||| ||||| ||| |||||| || ||||||||||||||| Sbjct: 1646455 ggtatccgccccttctcatatgggctggtgatcaccaatgtgtacgacagtgggtcagtc 1646396 Query: 243 ttcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgcttctggt 302 |||||||| ||||| || ||||||||||| || || |||||||| |||||||| |||||| Sbjct: 1646395 ttcagccctgaggtgctcgacctcactgaagaggacctgatggagaagtttgcatctggt 1646336 Query: 303 gtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgcaccg 362 ||||| |||||||||||| |||||||||| ||||||||||| || || |||||||| || Sbjct: 1646335 gtttcgatggttgcctcagtgtccctggcaatctcatacccaactattgctgctgcgcca 1646276 Query: 363 cacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagacagactactcg 422 |||||||||||||||| ||||||||||| ||||| || ||| ||||||| || ||||| Sbjct: 1646275 cacatgttcctcaatgggtacaagaatgtgcttgctgttgctgtggagaccgaatactca 1646216 Query: 423 tatgaccatgctgataagatcaaggagta 451 || ||||||||||||||||||||||| Sbjct: 1646215 tacccacatgctgataagatcaaggagta 1646187 Score = 101 bits (51), Expect = 3e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 2 tgttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttctt 61 |||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||| Sbjct: 1646714 tgttgatgtggtggttccccctggaaacactggtctggatccctcccagacttctttctt 1646655 Query: 62 ccaggtg 68 |||||| Sbjct: 1646654 tcaggtg 1646648 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 526 ccaaggaggaggagaagaaggaagaacccgaggagga 562 |||||||||| |||||||||||||| ||||||||||| Sbjct: 1645716 ccaaggaggaagagaagaaggaagagcccgaggagga 1645680 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgc 499 ||||||||||||||||||||| Sbjct: 6371352 tgctgctcctgctgctgctgc 6371332 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tcaaggagtacctcaaggac 461 |||||||||||||||||||| Sbjct: 27142425 tcaaggagtacctcaaggac 27142444
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 406 bits (205), Expect = e-110 Identities = 343/389 (88%) Strand = Plus / Minus Query: 63 caggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtg 122 |||||||||||||| |||||||||||||||||||||||||||||||||| || ||| || Sbjct: 1602065 caggtgcttaacatccccaccaagattaacaagggtactgtggaaattatcacccctgta 1602006 Query: 123 gagctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagctt 182 ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1602005 gagctcattaagaagggtgacaaggttggctcctctgagtctgccctgcttgccaagctt 1601946 Query: 183 ggtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagtc 242 ||||||||||||||||||||||| ||||| ||| |||||| || ||||||||||||||| Sbjct: 1601945 ggtatccgccccttctcatatgggctggtgatcaccaatgtgtacgacagtgggtcagtc 1601886 Query: 243 ttcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgcttctggt 302 |||||||| ||||| || ||||||||||| || || |||||||| |||||||| |||||| Sbjct: 1601885 ttcagccctgaggtgctcgacctcactgaagaggacctgatggagaagtttgcatctggt 1601826 Query: 303 gtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgcaccg 362 ||||| |||||||||||| |||||||||| ||||||||||| || || || ||||| || Sbjct: 1601825 gtttcgatggttgcctcagtgtccctggcaatctcatacccaactatcgcagctgcgcca 1601766 Query: 363 cacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagacagactactcg 422 |||||||||||||||| ||||||||||| || || || ||| ||||||| || ||||| Sbjct: 1601765 cacatgttcctcaatgggtacaagaatgtgctcgctgttgctgtggagaccgaatactca 1601706 Query: 423 tatgaccatgctgataagatcaaggagta 451 || |||||||| |||||||||||||| Sbjct: 1601705 tacccacatgctgacaagatcaaggagta 1601677 Score = 93.7 bits (47), Expect = 7e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 2 tgttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttctt 61 |||||||||||| ||||||||||| ||||||||||| |||||||||||||| || ||||| Sbjct: 1602205 tgttgatgtggttgttccccctggaaacactggtctcgatccctcccagacttctttctt 1602146 Query: 62 ccaggtg 68 ||||||| Sbjct: 1602145 ccaggtg 1602139 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 526 ccaaggaggaggagaagaaggaagaacccgaggaggaatc 565 |||||||||| |||||||||||||| |||||||| ||||| Sbjct: 1601202 ccaaggaggaagagaagaaggaagagcccgaggaagaatc 1601163 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 457 aggacccgagcaagtttgccgttgctgctcctgctgctgctgc 499 ||||||| ||||||||||| |||||||| |||| ||||||||| Sbjct: 1601274 aggaccccagcaagtttgctgttgctgcccctgttgctgctgc 1601232 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 529 aggaggaggagaagaaggaag 549 ||||||||||||||||||||| Sbjct: 27302645 aggaggaggagaagaaggaag 27302625 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 tgctgctcctgctgctgctgc 499 ||||||||||||||||||||| Sbjct: 26547895 tgctgctcctgctgctgctgc 26547915 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaagga 547 |||||||||||||||||||| Sbjct: 24833308 aaggaggaggagaagaagga 24833327 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 476 cgttgctgctcctgctgctgctgc 499 |||||||||| ||||||||||||| Sbjct: 5717519 cgttgctgctgctgctgctgctgc 5717542
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 406 bits (205), Expect = e-110 Identities = 343/389 (88%) Strand = Plus / Minus Query: 63 caggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtg 122 |||||||||||||| |||||||||||||||||||||||||||||||||| || ||| || Sbjct: 1602065 caggtgcttaacatccccaccaagattaacaagggtactgtggaaattatcacccctgta 1602006 Query: 123 gagctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagctt 182 ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1602005 gagctcattaagaagggtgacaaggttggctcctctgagtctgccctgcttgccaagctt 1601946 Query: 183 ggtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagtc 242 ||||||||||||||||||||||| ||||| ||| |||||| || ||||||||||||||| Sbjct: 1601945 ggtatccgccccttctcatatgggctggtgatcaccaatgtgtacgacagtgggtcagtc 1601886 Query: 243 ttcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgcttctggt 302 |||||||| ||||| || ||||||||||| || || |||||||| |||||||| |||||| Sbjct: 1601885 ttcagccctgaggtgctcgacctcactgaagaggacctgatggagaagtttgcatctggt 1601826 Query: 303 gtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgcaccg 362 ||||| |||||||||||| |||||||||| ||||||||||| || || || ||||| || Sbjct: 1601825 gtttcgatggttgcctcagtgtccctggcaatctcatacccaactatcgcagctgcgcca 1601766 Query: 363 cacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagacagactactcg 422 |||||||||||||||| ||||||||||| || || || ||| ||||||| || ||||| Sbjct: 1601765 cacatgttcctcaatgggtacaagaatgtgctcgctgttgctgtggagaccgaatactca 1601706 Query: 423 tatgaccatgctgataagatcaaggagta 451 || |||||||| |||||||||||||| Sbjct: 1601705 tacccacatgctgacaagatcaaggagta 1601677 Score = 93.7 bits (47), Expect = 7e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 2 tgttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttctt 61 |||||||||||| ||||||||||| ||||||||||| |||||||||||||| || ||||| Sbjct: 1602205 tgttgatgtggttgttccccctggaaacactggtctcgatccctcccagacttctttctt 1602146 Query: 62 ccaggtg 68 ||||||| Sbjct: 1602145 ccaggtg 1602139 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 526 ccaaggaggaggagaagaaggaagaacccgaggaggaatc 565 |||||||||| |||||||||||||| |||||||| ||||| Sbjct: 1601202 ccaaggaggaagagaagaaggaagagcccgaggaagaatc 1601163 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 457 aggacccgagcaagtttgccgttgctgctcctgctgctgctgc 499 ||||||| ||||||||||| |||||||| |||| ||||||||| Sbjct: 1601274 aggaccccagcaagtttgctgttgctgcccctgttgctgctgc 1601232 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 529 aggaggaggagaagaaggaag 549 ||||||||||||||||||||| Sbjct: 27228245 aggaggaggagaagaaggaag 27228225 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 tgctgctcctgctgctgctgc 499 ||||||||||||||||||||| Sbjct: 26476064 tgctgctcctgctgctgctgc 26476084 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaagga 547 |||||||||||||||||||| Sbjct: 24761514 aaggaggaggagaagaagga 24761533 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 476 cgttgctgctcctgctgctgctgc 499 |||||||||| ||||||||||||| Sbjct: 5717512 cgttgctgctgctgctgctgctgc 5717535
>emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575_G05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 91883 Score = 406 bits (205), Expect = e-110 Identities = 343/389 (88%) Strand = Plus / Plus Query: 63 caggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtg 122 |||||||||||||| |||||||||||||||||||||||||||||||||| || ||| || Sbjct: 90857 caggtgcttaacatccccaccaagattaacaagggtactgtggaaattatcacccctgta 90916 Query: 123 gagctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagctt 182 ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 90917 gagctcattaagaagggtgacaaggttggctcctctgagtctgccctgcttgccaagctt 90976 Query: 183 ggtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagtc 242 ||||||||||||||||||||||| ||||| ||| |||||| || ||||||||||||||| Sbjct: 90977 ggtatccgccccttctcatatgggctggtgatcaccaatgtgtacgacagtgggtcagtc 91036 Query: 243 ttcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgcttctggt 302 |||||||| ||||| || ||||||||||| || || |||||||| |||||||| |||||| Sbjct: 91037 ttcagccctgaggtgctcgacctcactgaagaggacctgatggagaagtttgcatctggt 91096 Query: 303 gtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgcaccg 362 ||||| |||||||||||| |||||||||| ||||||||||| || || || ||||| || Sbjct: 91097 gtttcgatggttgcctcagtgtccctggcaatctcatacccaactatcgcagctgcgcca 91156 Query: 363 cacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagacagactactcg 422 |||||||||||||||| ||||||||||| || || || ||| ||||||| || ||||| Sbjct: 91157 cacatgttcctcaatgggtacaagaatgtgctcgctgttgctgtggagaccgaatactca 91216 Query: 423 tatgaccatgctgataagatcaaggagta 451 || |||||||| |||||||||||||| Sbjct: 91217 tacccacatgctgacaagatcaaggagta 91245 Score = 93.7 bits (47), Expect = 7e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 2 tgttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttctt 61 |||||||||||| ||||||||||| ||||||||||| |||||||||||||| || ||||| Sbjct: 90717 tgttgatgtggttgttccccctggaaacactggtctcgatccctcccagacttctttctt 90776 Query: 62 ccaggtg 68 ||||||| Sbjct: 90777 ccaggtg 90783 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 526 ccaaggaggaggagaagaaggaagaacccgaggaggaatc 565 |||||||||| |||||||||||||| |||||||| ||||| Sbjct: 91720 ccaaggaggaagagaagaaggaagagcccgaggaagaatc 91759 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 457 aggacccgagcaagtttgccgttgctgctcctgctgctgctgc 499 ||||||| ||||||||||| |||||||| |||| ||||||||| Sbjct: 91648 aggaccccagcaagtttgctgttgctgcccctgttgctgctgc 91690
>emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa0009F13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183385 Score = 406 bits (205), Expect = e-110 Identities = 343/389 (88%) Strand = Plus / Plus Query: 63 caggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtg 122 |||||||||||||| |||||||||||||||||||||||||||||||||| || ||| || Sbjct: 23667 caggtgcttaacatccccaccaagattaacaagggtactgtggaaattatcacccctgta 23726 Query: 123 gagctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagctt 182 ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 23727 gagctcattaagaagggtgacaaggttggctcctctgagtctgccctgcttgccaagctt 23786 Query: 183 ggtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagtc 242 ||||||||||||||||||||||| ||||| ||| |||||| || ||||||||||||||| Sbjct: 23787 ggtatccgccccttctcatatgggctggtgatcaccaatgtgtacgacagtgggtcagtc 23846 Query: 243 ttcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgcttctggt 302 |||||||| ||||| || ||||||||||| || || |||||||| |||||||| |||||| Sbjct: 23847 ttcagccctgaggtgctcgacctcactgaagaggacctgatggagaagtttgcatctggt 23906 Query: 303 gtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgcaccg 362 ||||| |||||||||||| |||||||||| ||||||||||| || || || ||||| || Sbjct: 23907 gtttcgatggttgcctcagtgtccctggcaatctcatacccaactatcgcagctgcgcca 23966 Query: 363 cacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagacagactactcg 422 |||||||||||||||| ||||||||||| || || || ||| ||||||| || ||||| Sbjct: 23967 cacatgttcctcaatgggtacaagaatgtgctcgctgttgctgtggagaccgaatactca 24026 Query: 423 tatgaccatgctgataagatcaaggagta 451 || |||||||| |||||||||||||| Sbjct: 24027 tacccacatgctgacaagatcaaggagta 24055 Score = 93.7 bits (47), Expect = 7e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 2 tgttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttctt 61 |||||||||||| ||||||||||| ||||||||||| |||||||||||||| || ||||| Sbjct: 23527 tgttgatgtggttgttccccctggaaacactggtctcgatccctcccagacttctttctt 23586 Query: 62 ccaggtg 68 ||||||| Sbjct: 23587 ccaggtg 23593 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 526 ccaaggaggaggagaagaaggaagaacccgaggaggaatc 565 |||||||||| |||||||||||||| |||||||| ||||| Sbjct: 24530 ccaaggaggaagagaagaaggaagagcccgaggaagaatc 24569 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 457 aggacccgagcaagtttgccgttgctgctcctgctgctgctgc 499 ||||||| ||||||||||| |||||||| |||| ||||||||| Sbjct: 24458 aggaccccagcaagtttgctgttgctgcccctgttgctgctgc 24500
>emb|Y07959.1|ZMRPP0 Z.mays mRNA for acidic ribosomal protein P0 Length = 1253 Score = 264 bits (133), Expect = 3e-67 Identities = 181/197 (91%) Strand = Plus / Plus Query: 3 gttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttcttc 62 |||||||| || || ||||||||||||||||| |||||||| |||||||| || |||||| Sbjct: 496 gttgatgttgttgtgccccctggcaacactgggctggatccgtcccagacctctttcttc 555 Query: 63 caggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtg 122 |||||||||||||| ||||||||||||||||||||||| |||||||||| || ||| ||| Sbjct: 556 caggtgcttaacatccccaccaagattaacaagggtaccgtggaaattatcacccctgtg 615 Query: 123 gagctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagctt 182 |||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 616 gagctgatcaagaagggtgaaaaggtgggctcgtctgagtctgccctgctcgccaagctg 675 Query: 183 ggtatccgccccttctc 199 ||||||||||||||||| Sbjct: 676 ggtatccgccccttctc 692 Score = 210 bits (106), Expect = 4e-51 Identities = 226/266 (84%) Strand = Plus / Plus Query: 233 tgggtcagtcttcagccccgaggttcttgacctcactgaggaagatctgatggacaagtt 292 |||||| || |||||||| ||||| |||||||| | ||||| || ||||| || ||||| Sbjct: 726 tgggtccgtgttcagccctgaggtgcttgacctttccgaggaggacctgattgagaagtt 785 Query: 293 tgcttctggtgtttccatggttgcctcactgtccctggcgatctcataccccaccatggc 352 ||| ||||||| |||||||||||||| ||||| ||||||||||| ||||| ||| | || Sbjct: 786 tgccactggtgtctccatggttgcctccctgtcactggcgatctcgtacccgacccttgc 845 Query: 353 tgctgcaccgcacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagac 412 ||||| || ||||||||| |||||| ||||||||||| ||||| || ||| | ||||| Sbjct: 846 tgctgtgccccacatgttcatcaatgggtacaagaatgtgcttgctgttgctgtcgagac 905 Query: 413 agactactcgtatgaccatgctgataagatcaaggagtacctcaaggacccgagcaagtt 472 |||||||||||| |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 906 agactactcgtacccacatgctgacaagatcaaggagtacctcaaggacccaagcaagtt 965 Query: 473 tgccgttgctgctcctgctgctgctg 498 ||| ||||| ||||||| |||||||| Sbjct: 966 tgctgttgccgctcctgttgctgctg 991
>gb|BT016531.1| Zea mays clone Contig364 mRNA sequence Length = 1230 Score = 256 bits (129), Expect = 8e-65 Identities = 180/197 (91%) Strand = Plus / Plus Query: 3 gttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttcttc 62 |||||||| || || ||||||||||||||||| |||||||| |||||||| || |||||| Sbjct: 477 gttgatgttgttgtgccccctggcaacactgggctggatccgtcccagacctctttcttc 536 Query: 63 caggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtg 122 |||||||||||||| ||||||||||||||||||||||| |||||||||| || ||| ||| Sbjct: 537 caggtgcttaacatccccaccaagattaacaagggtaccgtggaaattatcacccctgtg 596 Query: 123 gagctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagctt 182 |||||||||||||||||||| ||||||||||| || |||||||||||||| |||||||| Sbjct: 597 gagctgatcaagaagggtgaaaaggtgggctcgtccgagtctgccctgctcgccaagctg 656 Query: 183 ggtatccgccccttctc 199 ||||||||||||||||| Sbjct: 657 ggtatccgccccttctc 673 Score = 186 bits (94), Expect = 6e-44 Identities = 223/266 (83%) Strand = Plus / Plus Query: 233 tgggtcagtcttcagccccgaggttcttgacctcactgaggaagatctgatggacaagtt 292 |||||| || |||||||| ||||| || ||||| ||||||| || ||||| || ||||| Sbjct: 707 tgggtccgtgttcagccctgaggtgctcgacctttctgaggaggacctgattgagaagtt 766 Query: 293 tgcttctggtgtttccatggttgcctcactgtccctggcgatctcataccccaccatggc 352 ||| ||||||| |||||||||||||| ||||| ||||||||||| ||||| ||| | || Sbjct: 767 tgccactggtgtctccatggttgcctccctgtcactggcgatctcgtacccgacccttgc 826 Query: 353 tgctgcaccgcacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagac 412 ||||| || ||||||||| |||||| ||||||||||| ||||| || ||| | ||||| Sbjct: 827 tgctgtgccccacatgttcatcaatgggtacaagaatgtgcttgctgttgctgtcgagac 886 Query: 413 agactactcgtatgaccatgctgataagatcaaggagtacctcaaggacccgagcaagtt 472 ||||||||| || |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 887 agactactcatacccacatgctgacaagatcaaggagtacctcaaggacccaagcaagtt 946 Query: 473 tgccgttgctgctcctgctgctgctg 498 ||| ||||| || || | |||||||| Sbjct: 947 tgctgttgccgccccggttgctgctg 972
>gb|BT018921.1| Zea mays clone Contig30.F mRNA sequence Length = 820 Score = 226 bits (114), Expect = 7e-56 Identities = 167/182 (91%), Gaps = 2/182 (1%) Strand = Plus / Plus Query: 18 ccccctggcaacactggtctggatccctcccagacgtccttcttccaggtgcttaacatt 77 ||||||||||||||||| ||||||||||||||||| || |||||| ||||||| ||||| Sbjct: 14 ccccctggcaacactgggctggatccctcccagacctctttcttc-aggtgct-aacatc 71 Query: 78 cccaccaagattaacaagggtactgtggaaattaccatcccagtggagctgatcaagaag 137 |||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||| Sbjct: 72 cccaccaagattaacaagggtactgtggaaattatcacccctgtggagctgatcaagaag 131 Query: 138 ggtgacaaggtgggctcctctgagtctgccctgcttgccaagcttggtatccgccccttc 197 ||||| ||||||||||| || |||||||||||||| |||||||| || |||||||||||| Sbjct: 132 ggtgagaaggtgggctcgtccgagtctgccctgctcgccaagctgggcatccgccccttc 191 Query: 198 tc 199 || Sbjct: 192 tc 193 Score = 141 bits (71), Expect = 3e-30 Identities = 218/267 (81%) Strand = Plus / Plus Query: 233 tgggtcagtcttcagccccgaggttcttgacctcactgaggaagatctgatggacaagtt 292 |||||| || |||||||| ||||| |||||||| ||||||| || || || || ||||| Sbjct: 227 tgggtctgtgttcagccctgaggtgcttgacctttctgaggaggacctaatcgagaagtt 286 Query: 293 tgcttctggtgtttccatggttgcctcactgtccctggcgatctcataccccaccatggc 352 || ||||||| |||||||| || || || |||||||| | || ||||| ||| | || Sbjct: 287 cgccactggtgtctccatggtcgcttctctttccctggcattatcgtacccgacccttgc 346 Query: 353 tgctgcaccgcacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagac 412 ||||| || |||||||| |||||| |||||||| || ||||| || ||| ||||||| Sbjct: 347 tgctgtgccccacatgtttatcaatgggtacaagaacgtgcttgctgttgctgtggagac 406 Query: 413 agactactcgtatgaccatgctgataagatcaaggagtacctcaaggacccgagcaagtt 472 ||||||||||| || || || ||||||||||||||||||||||||||||||||||| Sbjct: 407 ggactactcgtacccacacgccgacaagatcaaggagtacctcaaggacccgagcaagtt 466 Query: 473 tgccgttgctgctcctgctgctgctgc 499 ||| ||||||||||||| |||||||| Sbjct: 467 tgctgttgctgctcctgtagctgctgc 493
>dbj|AB091076.1| Zinnia elegans ZeRPP0 mRNA for putative 60S acidic ribosomal protein P0, partial cds Length = 820 Score = 190 bits (96), Expect = 4e-45 Identities = 147/164 (89%) Strand = Plus / Plus Query: 3 gttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttcttc 62 ||||||||||| || || ||||||||||||||||| || || || ||||| || |||||| Sbjct: 571 gttgatgtggttgtccctcctggcaacactggtcttgacccatctcagacctctttcttc 630 Query: 63 caggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtg 122 ||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| Sbjct: 631 caggtgcttaacattcccaccaagattaacaagggtactgttgaaattatcaccccagtg 690 Query: 123 gagctgatcaagaagggtgacaaggtgggctcctctgagtctgc 166 ||||| ||||||||||||||||| ||||| || |||||| |||| Sbjct: 691 gagcttatcaagaagggtgacaaagtgggttcatctgaggctgc 734
>ref|NM_111754.2| Arabidopsis thaliana structural constituent of ribosome AT3G09200 mRNA, complete cds Length = 1307 Score = 188 bits (95), Expect = 1e-44 Identities = 314/387 (81%) Strand = Plus / Plus Query: 4 ttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttcttcc 63 |||||||||| || | ||||||||||||||||| || || ||||| || || ||||||| Sbjct: 432 ttgatgtggttgtccaacctggcaacactggtctcgacccatcccaaacatctttcttcc 491 Query: 64 aggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtgg 123 ||||||||||||| || |||||||||||||||||||| || ||||| | || |||||| | Sbjct: 492 aggtgcttaacatcccaaccaagattaacaagggtaccgtcgaaatcatcaccccagttg 551 Query: 124 agctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagcttg 183 |||| |||||| | ||||||||||| || || |||||| |||| || || |||||||||| Sbjct: 552 agcttatcaagcaaggtgacaaggtcgggtcttctgaggctgcgcttctagccaagcttg 611 Query: 184 gtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagtct 243 | ||| | || ||||||||||| || || || ||||||||||| ||| ||||||| Sbjct: 612 gcatcaggccgttctcatatggtcttgttgtccagtctgtctatgacaatggctcagtct 671 Query: 244 tcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgcttctggtg 303 ||||||| ||||||||||| || ||||| || | || |||| ||||||||||||||| Sbjct: 672 tcagcccagaggttcttgatcttactgaagaccaacttgtggagaagtttgcttctggta 731 Query: 304 tttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgcaccgc 363 | |||||||| | || || | || || | || ||||| ||| | ||||||||||||| Sbjct: 732 tctccatggtcacttccttggctcttgctgtgtcgtaccctacccttgctgctgcaccgc 791 Query: 364 acatgttcctcaatgcatacaagaatg 390 | |||||| ||||||| |||||||||| Sbjct: 792 atatgttcatcaatgcgtacaagaatg 818
>gb|AY059117.1| Arabidopsis thaliana putative 60S acidic ribosomal protein P0 (At3g09200) mRNA, complete cds Length = 994 Score = 188 bits (95), Expect = 1e-44 Identities = 314/387 (81%) Strand = Plus / Plus Query: 4 ttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttcttcc 63 |||||||||| || | ||||||||||||||||| || || ||||| || || ||||||| Sbjct: 362 ttgatgtggttgtccaacctggcaacactggtctcgacccatcccaaacatctttcttcc 421 Query: 64 aggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtgg 123 ||||||||||||| || |||||||||||||||||||| || ||||| | || |||||| | Sbjct: 422 aggtgcttaacatcccaaccaagattaacaagggtaccgtcgaaatcatcaccccagttg 481 Query: 124 agctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagcttg 183 |||| |||||| | ||||||||||| || || |||||| |||| || || |||||||||| Sbjct: 482 agcttatcaagcaaggtgacaaggtcgggtcttctgaggctgcgcttctagccaagcttg 541 Query: 184 gtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagtct 243 | ||| | || ||||||||||| || || || ||||||||||| ||| ||||||| Sbjct: 542 gcatcaggccgttctcatatggtcttgttgtccagtctgtctatgacaatggctcagtct 601 Query: 244 tcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgcttctggtg 303 ||||||| ||||||||||| || ||||| || | || |||| ||||||||||||||| Sbjct: 602 tcagcccagaggttcttgatcttactgaagaccaacttgtggagaagtttgcttctggta 661 Query: 304 tttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgcaccgc 363 | |||||||| | || || | || || | || ||||| ||| | ||||||||||||| Sbjct: 662 tctccatggtcacttccttggctcttgctgtgtcgtaccctacccttgctgctgcaccgc 721 Query: 364 acatgttcctcaatgcatacaagaatg 390 | |||||| ||||||| |||||||||| Sbjct: 722 atatgttcatcaatgcgtacaagaatg 748
>gb|AF370225.1| Arabidopsis thaliana putative 60S acidic ribosomal protein P0 (At3g09200) mRNA, complete cds Length = 1160 Score = 188 bits (95), Expect = 1e-44 Identities = 314/387 (81%) Strand = Plus / Plus Query: 4 ttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttcttcc 63 |||||||||| || | ||||||||||||||||| || || ||||| || || ||||||| Sbjct: 432 ttgatgtggttgtccaacctggcaacactggtctcgacccatcccaaacatctttcttcc 491 Query: 64 aggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtgg 123 ||||||||||||| || |||||||||||||||||||| || ||||| | || |||||| | Sbjct: 492 aggtgcttaacatcccaaccaagattaacaagggtaccgtcgaaatcatcaccccagttg 551 Query: 124 agctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagcttg 183 |||| |||||| | ||||||||||| || || |||||| |||| || || |||||||||| Sbjct: 552 agcttatcaagcaaggtgacaaggtcgggtcttctgaggctgcgcttctagccaagcttg 611 Query: 184 gtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagtct 243 | ||| | || ||||||||||| || || || ||||||||||| ||| ||||||| Sbjct: 612 gcatcaggccgttctcatatggtcttgttgtccagtctgtctatgacaatggctcagtct 671 Query: 244 tcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgcttctggtg 303 ||||||| ||||||||||| || ||||| || | || |||| ||||||||||||||| Sbjct: 672 tcagcccagaggttcttgatcttactgaagaccaacttgtggagaagtttgcttctggta 731 Query: 304 tttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgcaccgc 363 | |||||||| | || || | || || | || ||||| ||| | ||||||||||||| Sbjct: 732 tctccatggtcacttccttggctcttgctgtgtcgtaccctacccttgctgctgcaccgc 791 Query: 364 acatgttcctcaatgcatacaagaatg 390 | |||||| ||||||| |||||||||| Sbjct: 792 atatgttcatcaatgcgtacaagaatg 818
>emb|BX823923.1|CNS0A6KD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1136 Score = 188 bits (95), Expect = 1e-44 Identities = 314/387 (81%) Strand = Plus / Plus Query: 4 ttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttcttcc 63 |||||||||| || | ||||||||||||||||| || || ||||| || || ||||||| Sbjct: 399 ttgatgtggttgtccaacctggcaacactggtctcgacccatcccaaacatctttcttcc 458 Query: 64 aggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtgg 123 ||||||||||||| || |||||||||||||||||||| || ||||| | || |||||| | Sbjct: 459 aggtgcttaacatcccaaccaagattaacaagggtaccgtcgaaatcatcaccccagttg 518 Query: 124 agctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagcttg 183 |||| |||||| | ||||||||||| || || |||||| |||| || || |||||||||| Sbjct: 519 agcttatcaagcaaggtgacaaggtcgggtcttctgaggctgcgcttctagccaagcttg 578 Query: 184 gtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagtct 243 | ||| | || ||||||||||| || || || ||||||||||| ||| ||||||| Sbjct: 579 gcatcaggccgttctcatatggtcttgttgtccagtctgtctatgacaatggctcagtct 638 Query: 244 tcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgcttctggtg 303 ||||||| ||||||||||| || ||||| || | || |||| ||||||||||||||| Sbjct: 639 tcagcccagaggttcttgatcttactgaagaccaacttgtggagaagtttgcttctggta 698 Query: 304 tttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgcaccgc 363 | |||||||| | || || | || || | || ||||| ||| | ||||||||||||| Sbjct: 699 tctccatggtcacttccttggctcttgctgtgtcgtaccctacccttgctgctgcaccgc 758 Query: 364 acatgttcctcaatgcatacaagaatg 390 | |||||| ||||||| |||||||||| Sbjct: 759 atatgttcatcaatgcgtacaagaatg 785
>gb|AY086582.1| Arabidopsis thaliana clone 2595 mRNA, complete sequence Length = 1199 Score = 188 bits (95), Expect = 1e-44 Identities = 314/387 (81%) Strand = Plus / Plus Query: 4 ttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttcttcc 63 |||||||||| || | ||||||||||||||||| || || ||||| || || ||||||| Sbjct: 430 ttgatgtggttgtccaacctggcaacactggtctcgacccatcccaaacatctttcttcc 489 Query: 64 aggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtgg 123 ||||||||||||| || |||||||||||||||||||| || ||||| | || |||||| | Sbjct: 490 aggtgcttaacatcccaaccaagattaacaagggtaccgtcgaaatcatcaccccagttg 549 Query: 124 agctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagcttg 183 |||| |||||| | ||||||||||| || || |||||| |||| || || |||||||||| Sbjct: 550 agcttatcaagcaaggtgacaaggtcgggtcttctgaggctgcgcttctagccaagcttg 609 Query: 184 gtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagtct 243 | ||| | || ||||||||||| || || || ||||||||||| ||| ||||||| Sbjct: 610 gcatcaggccgttctcatatggtcttgttgtccagtctgtctatgacaatggctcagtct 669 Query: 244 tcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgcttctggtg 303 ||||||| ||||||||||| || ||||| || | || |||| ||||||||||||||| Sbjct: 670 tcagcccagaggttcttgatcttactgaagaccaacttgtggagaagtttgcttctggta 729 Query: 304 tttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgcaccgc 363 | |||||||| | || || | || || | || ||||| ||| | ||||||||||||| Sbjct: 730 tctccatggtcacttccttggctcttgctgtgtcgtaccctacccttgctgctgcaccgc 789 Query: 364 acatgttcctcaatgcatacaagaatg 390 | |||||| ||||||| |||||||||| Sbjct: 790 atatgttcatcaatgcgtacaagaatg 816
>gb|L46848.1|SOYARPP Glycine max acidic ribosomal protein P0 mRNA, complete cds Length = 1247 Score = 178 bits (90), Expect = 1e-41 Identities = 318/394 (80%) Strand = Plus / Plus Query: 4 ttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttcttcc 63 ||||||| || ||||| ||||||||||| || || |||||||| ||||| || ||||||| Sbjct: 492 ttgatgtcgttgttcctcctggcaacacagggctcgatccctctcagacctctttcttcc 551 Query: 64 aggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtgg 123 |||||||||||||||| ||||||||||||||||||||||||||||| | | || |||| Sbjct: 552 aggtgcttaacattcctaccaagattaacaagggtactgtggaaatcattacacctgtgg 611 Query: 124 agctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagcttg 183 | || || | |||||| |||||||| || || ||||| |||| ||||||||||||| | Sbjct: 612 aactcattaggaagggagacaaggttggatcttctgaagctgcattgcttgccaagctag 671 Query: 184 gtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagtct 243 | || | |||||||||||||| || || | | || ||||| | ||| ||||| | Sbjct: 672 gcataaggcccttctcatatgggcttgtggttctctccgtttatgataatggttcagtgt 731 Query: 244 tcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgcttctggtg 303 ||||||| ||||||||||| || |||||||| ||||| || | ||||||||| |||||| Sbjct: 732 tcagccctgaggttcttgatcttactgaggatgatctcattgggaagtttgctgctggtg 791 Query: 304 tttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgcaccgc 363 | || |||||| | ||||| || |||| || ||||| || || | ||||| ||||| | Sbjct: 792 tctcaatggttacttcactttcattggctatttcatatccaacacttgctgcagcaccac 851 Query: 364 acatgttcctcaatgcatacaagaatgttcttgc 397 ||||||| ||||||| ||||||||||||||||| Sbjct: 852 acatgtttgtcaatgcctacaagaatgttcttgc 885 Score = 50.1 bits (25), Expect = 0.009 Identities = 95/118 (80%), Gaps = 9/118 (7%) Strand = Plus / Plus Query: 442 tcaaggagtacctcaaggacccgagcaagtttgccgttgc------tgctcctgctgctg 495 |||||||||| || |||||||| || || ||||||||||| |||| || |||||| Sbjct: 930 tcaaggagtatctgaaggacccaagtaaatttgccgttgccgccgttgctgctcctgctg 989 Query: 496 ctgcctctggtggtgccgccgctgctgcccccaaggaggaggagaagaaggaagaacc 553 |||| ||||||| | | || ||||| ||| ||||||||||| |||||||||||||| Sbjct: 990 ctgcatctggtgctccagcggctgcagcc---aaggaggaggaaaagaaggaagaacc 1044
>emb|BX824039.1|CNS0A6RI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH17ZF06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1185 Score = 170 bits (86), Expect = 4e-39 Identities = 254/310 (81%) Strand = Plus / Plus Query: 4 ttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttcttcc 63 |||||||||| || | ||||||||||||||||| || || ||||| || || ||||||| Sbjct: 416 ttgatgtggttgtccaacctggcaacactggtctcgacccatcccaaacatctttcttcc 475 Query: 64 aggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtgg 123 ||||||||||||| || |||||||||||||||||||| || ||||| | || |||||| | Sbjct: 476 aggtgcttaacatcccaaccaagattaacaagggtaccgtcgaaatcatcaccccagttg 535 Query: 124 agctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagcttg 183 |||| |||||| | ||||||||||| || || |||||| |||| || || |||||||||| Sbjct: 536 agcttatcaagcaaggtgacaaggtcgggtcttctgaggctgcgcttctagccaagcttg 595 Query: 184 gtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagtct 243 | ||| | || ||||||||||| || || || ||||||||| | ||| ||||||| Sbjct: 596 gcatcaggccgttctcatatggtcttgttgtccagtctgtctatgaaaatggctcagtct 655 Query: 244 tcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgcttctggtg 303 ||||||| ||||||||||| || ||||| || | || |||| ||||||||||||||| Sbjct: 656 tcagcccagaggttcttgatcttactgaagaccaacttgtggagaagtttgcttctggta 715 Query: 304 tttccatggt 313 | |||||||| Sbjct: 716 tctccatggt 725 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 351 gctgctgcaccgcacatgttcctcaatgcatacaagaatg 390 |||||||||||||| |||||| ||||||| |||||||||| Sbjct: 763 gctgctgcaccgcatatgttcatcaatgcgtacaagaatg 802
>ref|NM_111960.2| Arabidopsis thaliana structural constituent of ribosome AT3G11250 mRNA, complete cds Length = 1239 Score = 161 bits (81), Expect = 3e-36 Identities = 156/181 (86%) Strand = Plus / Plus Query: 4 ttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttcttcc 63 |||||||||| |||| ||||||||||||||||| || || || || || || ||||||| Sbjct: 455 ttgatgtggttgttcaacctggcaacactggtcttgacccatctcaaacatcgttcttcc 514 Query: 64 aggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtgg 123 ||||||||||||||||||| |||||||||||||||||||| ||||||| || ||| |||| Sbjct: 515 aggtgcttaacattcccactaagattaacaagggtactgttgaaattatcacccctgtgg 574 Query: 124 agctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagcttg 183 |||| |||||| | ||||||||||| || || |||||| ||||||| || || ||||||| Sbjct: 575 agcttatcaagcaaggtgacaaggttgggtcttctgaggctgcccttctagctaagcttg 634 Query: 184 g 184 | Sbjct: 635 g 635 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 354 gctgcaccgcacatgttcctcaatgcatacaagaatg 390 ||||||||||| |||||| ||||||| |||||||||| Sbjct: 805 gctgcaccgcatatgttcatcaatgcctacaagaatg 841
>gb|DQ235176.1| Solanum tuberosum clone 156H10 P0 ribosomal protein-like mRNA, complete cds Length = 1254 Score = 161 bits (81), Expect = 3e-36 Identities = 240/293 (81%) Strand = Plus / Plus Query: 3 gttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttcttc 62 |||||||| || || || ||||| ||||||||||| ||||| || ||||| || |||||| Sbjct: 527 gttgatgttgttgtccctcctggtaacactggtcttgatccatctcagacctctttcttc 586 Query: 63 caggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtg 122 |||||||| ||||| || || |||||||||||||||||||| ||||||| || || || Sbjct: 587 caggtgctcaacatcccaactaagattaacaagggtactgttgaaattatcactcctgtt 646 Query: 123 gagctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagctt 182 || || ||||||||||||||||| || || |||||||| |||||||||||||||| ||| Sbjct: 647 gaactcatcaagaagggtgacaaagttggttcctctgaagctgccctgcttgccaaactt 706 Query: 183 ggtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagtc 242 || || | || ||||||||||| || || | | ||| || |||| ||| || ||| Sbjct: 707 ggaattaggccattctcatatggtcttgttgttgtctctgtttacgacaatggatccgtc 766 Query: 243 ttcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgc 295 |||||||| |||||||||||||| |||||||| ||||| || || |||||||| Sbjct: 767 ttcagccctgaggttcttgacctgactgaggatgatctcattgagaagtttgc 819 Score = 50.1 bits (25), Expect = 0.009 Identities = 123/155 (79%), Gaps = 3/155 (1%) Strand = Plus / Plus Query: 444 aaggagtacctcaaggacccgagcaagtttgccgttgctgctcctgctgctgctgcctct 503 ||||| |||||| ||| || ||||||||||| ||||||||| || ||||||| || || Sbjct: 968 aaggaatacctcgcggatcctagcaagtttgctgttgctgctgctcctgctgcagctgct 1027 Query: 504 ggt---ggtgccgccgctgctgcccccaaggaggaggagaagaaggaagaacccgaggag 560 ||| || || || ||||||| | ||||||||||||||||||||||| || | ||| Sbjct: 1028 ggttctggagctgctcctgctgctgctaaggaggaggagaagaaggaagagcctgctgag 1087 Query: 561 gaatcagatggcgagatgggattcagtctgtttga 595 | ||||||| || ||||| |||||| ||||||| Sbjct: 1088 gtctcagatgatgacatgggtttcagtttgtttga 1122
>gb|AY091201.1| Arabidopsis thaliana putative 60S acidic ribosomal protein (At3g11250) mRNA, complete cds Length = 1003 Score = 161 bits (81), Expect = 3e-36 Identities = 156/181 (86%) Strand = Plus / Plus Query: 4 ttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttcttcc 63 |||||||||| |||| ||||||||||||||||| || || || || || || ||||||| Sbjct: 362 ttgatgtggttgttcaacctggcaacactggtcttgacccatctcaaacatcgttcttcc 421 Query: 64 aggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtgg 123 ||||||||||||||||||| |||||||||||||||||||| ||||||| || ||| |||| Sbjct: 422 aggtgcttaacattcccactaagattaacaagggtactgttgaaattatcacccctgtgg 481 Query: 124 agctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagcttg 183 |||| |||||| | ||||||||||| || || |||||| ||||||| || || ||||||| Sbjct: 482 agcttatcaagcaaggtgacaaggttgggtcttctgaggctgcccttctagctaagcttg 541 Query: 184 g 184 | Sbjct: 542 g 542 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 354 gctgcaccgcacatgttcctcaatgcatacaagaatg 390 ||||||||||| |||||| ||||||| |||||||||| Sbjct: 712 gctgcaccgcatatgttcatcaatgcctacaagaatg 748
>gb|AY056150.1| Arabidopsis thaliana putative 60S acidic ribosomal protein (At3g11250) mRNA, complete cds Length = 1174 Score = 161 bits (81), Expect = 3e-36 Identities = 156/181 (86%) Strand = Plus / Plus Query: 4 ttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttcttcc 63 |||||||||| |||| ||||||||||||||||| || || || || || || ||||||| Sbjct: 425 ttgatgtggttgttcaacctggcaacactggtcttgacccatctcaaacatcgttcttcc 484 Query: 64 aggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtgg 123 ||||||||||||||||||| |||||||||||||||||||| ||||||| || ||| |||| Sbjct: 485 aggtgcttaacattcccactaagattaacaagggtactgttgaaattatcacccctgtgg 544 Query: 124 agctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagcttg 183 |||| |||||| | ||||||||||| || || |||||| ||||||| || || ||||||| Sbjct: 545 agcttatcaagcaaggtgacaaggttgggtcttctgaggctgcccttctagctaagcttg 604 Query: 184 g 184 | Sbjct: 605 g 605 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 354 gctgcaccgcacatgttcctcaatgcatacaagaatg 390 ||||||||||| |||||| ||||||| |||||||||| Sbjct: 775 gctgcaccgcatatgttcatcaatgcctacaagaatg 811
>gb|AY087728.1| Arabidopsis thaliana clone 38036 mRNA, complete sequence Length = 1185 Score = 161 bits (81), Expect = 3e-36 Identities = 156/181 (86%) Strand = Plus / Plus Query: 4 ttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttcttcc 63 |||||||||| |||| ||||||||||||||||| || || || || || || ||||||| Sbjct: 402 ttgatgtggttgttcaacctggcaacactggtcttgacccatctcaaacatcgttcttcc 461 Query: 64 aggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtgg 123 ||||||||||||||||||| |||||||||||||||||||| ||||||| || ||| |||| Sbjct: 462 aggtgcttaacattcccactaagattaacaagggtactgttgaaattatcacccctgtgg 521 Query: 124 agctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagcttg 183 |||| |||||| | ||||||||||| || || |||||| ||||||| || || ||||||| Sbjct: 522 agcttatcaagcaaggtgacaaggttgggtcttctgaggctgcccttctagctaagcttg 581 Query: 184 g 184 | Sbjct: 582 g 582 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 354 gctgcaccgcacatgttcctcaatgcatacaagaatg 390 ||||||||||| |||||| ||||||| |||||||||| Sbjct: 752 gctgcaccgcatatgttcatcaatgcctacaagaatg 788
>gb|DQ241840.1| Solanum tuberosum clone 181G12 P0 ribosomal protein-like mRNA, complete cds Length = 1253 Score = 161 bits (81), Expect = 3e-36 Identities = 240/293 (81%) Strand = Plus / Plus Query: 3 gttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttcttc 62 |||||||| || || || ||||| ||||||||||| ||||| || ||||| || |||||| Sbjct: 505 gttgatgttgttgtccctcctggtaacactggtcttgatccatctcagacctctttcttc 564 Query: 63 caggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtg 122 |||||||| ||||| || || |||||||||||||||||||| ||||||| || || || Sbjct: 565 caggtgctcaacatcccaactaagattaacaagggtactgttgaaattatcactcctgtt 624 Query: 123 gagctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagctt 182 || || ||||||||||||||||| || || |||||||| |||||||||||||||| ||| Sbjct: 625 gaactcatcaagaagggtgacaaagttggttcctctgaagctgccctgcttgccaaactt 684 Query: 183 ggtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagtc 242 || || | || ||||||||||| || || | | ||| || |||| ||| || ||| Sbjct: 685 ggaattaggccattctcatatggtcttgttgttgtctctgtttacgacaatggatccgtc 744 Query: 243 ttcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgc 295 |||||||| |||||||||||||| |||||||| ||||| || || |||||||| Sbjct: 745 ttcagccctgaggttcttgacctgactgaggatgatctcattgagaagtttgc 797 Score = 50.1 bits (25), Expect = 0.009 Identities = 123/155 (79%), Gaps = 3/155 (1%) Strand = Plus / Plus Query: 444 aaggagtacctcaaggacccgagcaagtttgccgttgctgctcctgctgctgctgcctct 503 ||||| |||||| ||| || ||||||||||| ||||||||| || ||||||| || || Sbjct: 946 aaggaatacctcgcggatcctagcaagtttgctgttgctgctgctcctgctgcagctgct 1005 Query: 504 ggt---ggtgccgccgctgctgcccccaaggaggaggagaagaaggaagaacccgaggag 560 ||| || || || ||||||| | ||||||||||||||||||||||| || | ||| Sbjct: 1006 ggttctggagctgctcctgctgctgctaaggaggaggagaagaaggaagagcctgctgag 1065 Query: 561 gaatcagatggcgagatgggattcagtctgtttga 595 | ||||||| || ||||| |||||| ||||||| Sbjct: 1066 gtctcagatgatgacatgggtttcagtttgtttga 1100
>emb|X93587.1|LLP0 L.luteus mRNA for P0 ribosomal protein Length = 1393 Score = 159 bits (80), Expect = 1e-35 Identities = 161/188 (85%) Strand = Plus / Plus Query: 24 ggcaacactggtctggatccctcccagacgtccttcttccaggtgcttaacattcccacc 83 ||||||||||| || ||||| || ||||| || |||||||||||||| |||||||||||| Sbjct: 541 ggcaacactgggctcgatccatctcagacctctttcttccaggtgctcaacattcccacc 600 Query: 84 aagattaacaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgac 143 |||||||||||||||||||| ||||||| || || |||||||| || |||||||| ||| Sbjct: 601 aagattaacaagggtactgttgaaattatcacacccgtggagctcattaagaagggagac 660 Query: 144 aaggtgggctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatat 203 ||||| ||||| ||||| |||| |||||||||||||||| || | || ||||||||| Sbjct: 661 aaggttggctcttctgaagctgcattgcttgccaagcttggcataaggccattctcatat 720 Query: 204 ggactggt 211 || ||||| Sbjct: 721 ggtctggt 728
>ref|XM_479932.1| Oryza sativa (japonica cultivar-group), mRNA Length = 451 Score = 149 bits (75), Expect = 1e-32 Identities = 159/187 (85%) Strand = Plus / Plus Query: 298 ctggtgtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctg 357 |||||||||| |||||||||||| | |||||||| ||||| ||||| || || ||||||| Sbjct: 1 ctggtgtttctatggttgcctcagtctccctggcaatctcgtacccaactattgctgctg 60 Query: 358 caccgcacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagacagact 417 |||| |||||||||||||||| ||||||||||| ||||| || ||| ||||||| || | Sbjct: 61 caccacacatgttcctcaatgggtacaagaatgtgcttgctgttgctgtggagaccgaat 120 Query: 418 actcgtatgaccatgctgataagatcaaggagtacctcaaggacccgagcaagtttgccg 477 ||||||| ||||||||||||||||||||||| | || ||||| |||||||| || | Sbjct: 121 actcgtacccacatgctgataagatcaaggagtatttgaaagaccccagcaagttcgctg 180 Query: 478 ttgctgc 484 ||||||| Sbjct: 181 ttgctgc 187 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 526 ccaaggaggaggagaagaaggaagaacccgaggaggaatcagatgg 571 |||||||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 229 ccaaggaggaagagaagaaggaagagcccgaggaggagtccgatgg 274
>gb|AC011436.7|ATAC011436 Arabidopsis thaliana chromosome III BAC F3L24 genomic sequence, complete sequence Length = 106688 Score = 149 bits (75), Expect = 1e-32 Identities = 264/327 (80%) Strand = Plus / Minus Query: 64 aggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtgg 123 ||||||||||||| || |||||||||||||||||||| || ||||| | || |||||| | Sbjct: 20578 aggtgcttaacatcccaaccaagattaacaagggtaccgtcgaaatcatcaccccagttg 20519 Query: 124 agctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagcttg 183 |||| |||||| | ||||||||||| || || |||||| |||| || || |||||||||| Sbjct: 20518 agcttatcaagcaaggtgacaaggtcgggtcttctgaggctgcgcttctagccaagcttg 20459 Query: 184 gtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagtct 243 | ||| | || ||||||||||| || || || ||||||||||| ||| ||||||| Sbjct: 20458 gcatcaggccgttctcatatggtcttgttgtccagtctgtctatgacaatggctcagtct 20399 Query: 244 tcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgcttctggtg 303 ||||||| ||||||||||| || ||||| || | || |||| ||||||||||||||| Sbjct: 20398 tcagcccagaggttcttgatcttactgaagaccaacttgtggagaagtttgcttctggta 20339 Query: 304 tttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgcaccgc 363 | |||||||| | || || | || || | || ||||| ||| | ||||||||||||| Sbjct: 20338 tctccatggtcacttccttggctcttgctgtgtcgtaccctacccttgctgctgcaccgc 20279 Query: 364 acatgttcctcaatgcatacaagaatg 390 | |||||| ||||||| |||||||||| Sbjct: 20278 atatgttcatcaatgcgtacaagaatg 20252 Score = 48.1 bits (24), Expect = 0.035 Identities = 54/64 (84%) Strand = Plus / Minus Query: 4 ttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttcttcc 63 |||||||||| || | ||||||||||||||||| || || ||||| || || ||||||| Sbjct: 20730 ttgatgtggttgtccaacctggcaacactggtctcgacccatcccaaacatctttcttcc 20671 Query: 64 aggt 67 |||| Sbjct: 20670 aggt 20667
>gb|AC009326.8|ATAC009326 Arabidopsis thaliana chromosome III P1 MZB10 genomic sequence, complete sequence Length = 85561 Score = 149 bits (75), Expect = 1e-32 Identities = 264/327 (80%) Strand = Plus / Minus Query: 64 aggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtgg 123 ||||||||||||| || |||||||||||||||||||| || ||||| | || |||||| | Sbjct: 84901 aggtgcttaacatcccaaccaagattaacaagggtaccgtcgaaatcatcaccccagttg 84842 Query: 124 agctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagcttg 183 |||| |||||| | ||||||||||| || || |||||| |||| || || |||||||||| Sbjct: 84841 agcttatcaagcaaggtgacaaggtcgggtcttctgaggctgcgcttctagccaagcttg 84782 Query: 184 gtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagtct 243 | ||| | || ||||||||||| || || || ||||||||||| ||| ||||||| Sbjct: 84781 gcatcaggccgttctcatatggtcttgttgtccagtctgtctatgacaatggctcagtct 84722 Query: 244 tcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgcttctggtg 303 ||||||| ||||||||||| || ||||| || | || |||| ||||||||||||||| Sbjct: 84721 tcagcccagaggttcttgatcttactgaagaccaacttgtggagaagtttgcttctggta 84662 Query: 304 tttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgcaccgc 363 | |||||||| | || || | || || | || ||||| ||| | ||||||||||||| Sbjct: 84661 tctccatggtcacttccttggctcttgctgtgtcgtaccctacccttgctgctgcaccgc 84602 Query: 364 acatgttcctcaatgcatacaagaatg 390 | |||||| ||||||| |||||||||| Sbjct: 84601 atatgttcatcaatgcgtacaagaatg 84575 Score = 48.1 bits (24), Expect = 0.035 Identities = 54/64 (84%) Strand = Plus / Minus Query: 4 ttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttcttcc 63 |||||||||| || | ||||||||||||||||| || || ||||| || || ||||||| Sbjct: 85053 ttgatgtggttgtccaacctggcaacactggtctcgacccatcccaaacatctttcttcc 84994 Query: 64 aggt 67 |||| Sbjct: 84993 aggt 84990
>dbj|AK062008.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-E02, full insert sequence Length = 451 Score = 149 bits (75), Expect = 1e-32 Identities = 159/187 (85%) Strand = Plus / Plus Query: 298 ctggtgtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctg 357 |||||||||| |||||||||||| | |||||||| ||||| ||||| || || ||||||| Sbjct: 1 ctggtgtttctatggttgcctcagtctccctggcaatctcgtacccaactattgctgctg 60 Query: 358 caccgcacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagacagact 417 |||| |||||||||||||||| ||||||||||| ||||| || ||| ||||||| || | Sbjct: 61 caccacacatgttcctcaatgggtacaagaatgtgcttgctgttgctgtggagaccgaat 120 Query: 418 actcgtatgaccatgctgataagatcaaggagtacctcaaggacccgagcaagtttgccg 477 ||||||| ||||||||||||||||||||||| | || ||||| |||||||| || | Sbjct: 121 actcgtacccacatgctgataagatcaaggagtatttgaaagaccccagcaagttcgctg 180 Query: 478 ttgctgc 484 ||||||| Sbjct: 181 ttgctgc 187 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 526 ccaaggaggaggagaagaaggaagaacccgaggaggaatcagatgg 571 |||||||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 229 ccaaggaggaagagaagaaggaagagcccgaggaggagtccgatgg 274
>gb|AF227622.1|AF227622 Euphorbia esula 60S acidic ribosomal protein PO mRNA, partial cds Length = 1127 Score = 137 bits (69), Expect = 5e-29 Identities = 144/169 (85%) Strand = Plus / Plus Query: 4 ttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttcttcc 63 |||||||||| || || ||||||||||| || || || || |||||||| || ||||||| Sbjct: 356 ttgatgtggttgtcccacctggcaacacagggctcgacccttcccagacctctttcttcc 415 Query: 64 aggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtgg 123 |||| ||||||||||| ||||||||||||||||| || || ||||| | || ||| |||| Sbjct: 416 aggtccttaacattcctaccaagattaacaagggaacagtcgaaatcatcacccctgtgg 475 Query: 124 agctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgct 172 | || ||||||||||| ||||||||||||||||| ||| ||||| |||| Sbjct: 476 aactaatcaagaagggagacaaggtgggctcctccgaggctgccttgct 524 Score = 44.1 bits (22), Expect = 0.55 Identities = 49/58 (84%) Strand = Plus / Plus Query: 334 tctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgt 391 |||||||||| || | |||||||| || ||||||||| | ||||| ||||||||||| Sbjct: 686 tctcatacccaactctagctgctgccccccacatgttcattaatgcctacaagaatgt 743
>emb|X15206.1|CRCRE2 C.rubrum mRNA for light-induced 34kD protein Length = 1332 Score = 131 bits (66), Expect = 3e-27 Identities = 153/182 (84%) Strand = Plus / Plus Query: 24 ggcaacactggtctggatccctcccagacgtccttcttccaggtgcttaacattcccacc 83 |||||||||||||| || ||||||||||| || ||||||||||| |||||||| ||||| Sbjct: 624 ggcaacactggtcttgacccctcccagacatctttcttccaggttcttaacatccccact 683 Query: 84 aagattaacaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgac 143 |||||||||||||||||||| ||||||| || | || ||||| ||||||||||| || Sbjct: 684 aagattaacaagggtactgtcgaaattatcactgctgtagagctcatcaagaagggcgaa 743 Query: 144 aaggtgggctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatat 203 |||||||| || |||||| | || || ||||| |||||||| || | || ||||||||| Sbjct: 744 aaggtgggttcttctgaggcagctctacttgcaaagcttggaattaggcctttctcatat 803 Query: 204 gg 205 || Sbjct: 804 gg 805 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 533 ggaggagaagaaggaagaacccgaggaggaatcagatggcgagatgggattcagtctgtt 592 |||||| |||||||||||||| ||||| |||||||||| || || || |||||||| || Sbjct: 1136 ggaggaaaagaaggaagaacctgaggaagaatcagatgatgacatcggtttcagtctctt 1195 Query: 593 tgacgactaag 603 |||||| |||| Sbjct: 1196 tgacgattaag 1206
>gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11B9 genomic sequence, complete sequence Length = 103517 Score = 121 bits (61), Expect = 3e-24 Identities = 106/121 (87%) Strand = Plus / Plus Query: 64 aggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtgg 123 ||||||||||||||||||| |||||||||||||||||||| ||||||| || ||| |||| Sbjct: 59343 aggtgcttaacattcccactaagattaacaagggtactgttgaaattatcacccctgtgg 59402 Query: 124 agctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagcttg 183 |||| |||||| | ||||||||||| || || |||||| ||||||| || || ||||||| Sbjct: 59403 agcttatcaagcaaggtgacaaggttgggtcttctgaggctgcccttctagctaagcttg 59462 Query: 184 g 184 | Sbjct: 59463 g 59463 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 354 gctgcaccgcacatgttcctcaatgcatacaagaatg 390 ||||||||||| |||||| ||||||| |||||||||| Sbjct: 59633 gctgcaccgcatatgttcatcaatgcctacaagaatg 59669 Score = 48.1 bits (24), Expect = 0.035 Identities = 54/64 (84%) Strand = Plus / Plus Query: 4 ttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttcttcc 63 |||||||||| |||| ||||||||||||||||| || || || || || || ||||||| Sbjct: 59186 ttgatgtggttgttcaacctggcaacactggtcttgacccatctcaaacatcgttcttcc 59245 Query: 64 aggt 67 |||| Sbjct: 59246 aggt 59249
>dbj|AB236824.1| Trifolium pratense RNA for putative 60S acidic ribosomal protein P0, complete cds, clone: C2319 Length = 1345 Score = 113 bits (57), Expect = 7e-22 Identities = 123/145 (84%) Strand = Plus / Plus Query: 4 ttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttcttcc 63 ||||||| || || || ||||| ||||| || || || || |||||||| || ||||||| Sbjct: 521 ttgatgttgttgtgcctcctggtaacacagggctcgacccatcccagacctctttcttcc 580 Query: 64 aggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtgg 123 ||||||||||||| |||||||||||||||||||||||||||||||| | | ||| || | Sbjct: 581 aggtgcttaacatccccaccaagattaacaagggtactgtggaaatcattacccctgttg 640 Query: 124 agctgatcaagaagggtgacaaggt 148 | || ||||||||||| |||||||| Sbjct: 641 aactcatcaagaagggagacaaggt 665 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 299 tggtgtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgc 358 ||||||||| |||||| | ||||| || |||| ||||| ||||| || | || ||||| Sbjct: 816 tggtgtttcaatggttacttcactttcgttggccatctcttacccaacacttgcagctgc 875 Query: 359 accgcacatgttcctcaatgcatacaagaatgttctt 395 ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 876 acctcacatgttcgtcaatgcctacaagaatgttctt 912 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 507 ggtgccgccgctgctgcccccaaggaggaggagaagaag 545 ||||||||| ||||||| |||||||||||||||||||| Sbjct: 1027 ggtgccgcccctgctgcagccaaggaggaggagaagaag 1065
>dbj|AB236811.1| Trifolium pratense RNA for putative 60S acidic ribosomal protein P0, complete cds, clone: C212 Length = 1326 Score = 113 bits (57), Expect = 7e-22 Identities = 123/145 (84%) Strand = Plus / Plus Query: 4 ttgatgtggtggttccccctggcaacactggtctggatccctcccagacgtccttcttcc 63 ||||||| || || || ||||| ||||| || || || || |||||||| || ||||||| Sbjct: 528 ttgatgttgttgtgcctcctggtaacacagggctcgacccatcccagacctctttcttcc 587 Query: 64 aggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtgg 123 ||||||||||||| |||||||||||||||||||||||||||||||| | | ||| || | Sbjct: 588 aggtgcttaacatccccaccaagattaacaagggtactgtggaaatcattacccctgttg 647 Query: 124 agctgatcaagaagggtgacaaggt 148 | || ||||||||||| |||||||| Sbjct: 648 aactcatcaagaagggagacaaggt 672 Score = 58.0 bits (29), Expect = 4e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 299 tggtgtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgc 358 ||||||||| |||||| | ||||| || |||| ||||| ||||| || | || ||||| Sbjct: 823 tggtgtttcaatggttacttcactttcgttggccatctcttacccaacacttgcagctgc 882 Query: 359 accgcacatgttcctcaatgcatacaagaatgttctt 395 ||| ||||||||| | ||||| ||||||||||||||| Sbjct: 883 acctcacatgttcgtgaatgcctacaagaatgttctt 919 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 507 ggtgccgccgctgctgcccccaaggaggaggagaagaag 545 ||||||||| ||||||| |||||||||||||||||||| Sbjct: 1034 ggtgccgcccctgctgcagccaaggaggaggagaagaag 1072
>gb|AC130799.19| Medicago truncatula clone mth2-34b13, complete sequence Length = 133305 Score = 109 bits (55), Expect = 1e-20 Identities = 172/211 (81%) Strand = Plus / Minus Query: 64 aggtgcttaacattcccaccaagattaacaagggtactgtggaaattaccatcccagtgg 123 ||||||| ||||| || ||||||||||||||||||||||||||||| | | |||||||| Sbjct: 104236 aggtgctcaacatcccaaccaagattaacaagggtactgtggaaatcattaccccagtgg 104177 Query: 124 agctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaagcttg 183 | ||||| ||||| || |||||||| || || ||||| |||| ||||||||||| | | Sbjct: 104176 aactgattaagaaaggagacaaggttggatcttctgaagctgcattgcttgccaagttag 104117 Query: 184 gtatccgccccttctcatatggactggtcatctgcaatgtctatgacagtgggtcagtct 243 |||| | ||||| |||||||| || || || ||| ||||||| ||| ||||| | Sbjct: 104116 gtattaggcccttttcatatgggcttgtggtcctttctgtttatgacaatggttcagtgt 104057 Query: 244 tcagccccgaggttcttgacctcactgagga 274 | ||||| ||||||||||||||||||||||| Sbjct: 104056 ttagccctgaggttcttgacctcactgagga 104026 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgcctctggtggtgccgccgctgctgcccccaaggaggag 536 |||||||| || ||||||||||| |||||||||||| | ||||| || ||||||||||| Sbjct: 103728 gttgctgccccagctgctgctgcatctggtggtgcccctgctgccgctgccaaggaggag 103669 Query: 537 gagaagaaggaaga 550 | ||||||||||| Sbjct: 103668 gctaagaaggaaga 103655
>ref|NM_129559.2| Arabidopsis thaliana structural constituent of ribosome AT2G40010 mRNA, complete cds Length = 1153 Score = 99.6 bits (50), Expect = 1e-17 Identities = 149/182 (81%) Strand = Plus / Plus Query: 24 ggcaacactggtctggatccctcccagacgtccttcttccaggtgcttaacattcccacc 83 |||||||||||||| || || || ||||| |||||||||||||||||||||||||| ||| Sbjct: 385 ggcaacactggtcttgacccttcacagacctccttcttccaggtgcttaacattccaacc 444 Query: 84 aagattaacaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgac 143 || || ||||| ||||| || || || | | ||| |||||||| |||||||| || ||| Sbjct: 445 aaaatcaacaaaggtacggttgagatcataacccctgtggagctcatcaagaaaggcgac 504 Query: 144 aaggtgggctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatat 203 || || || || || ||| |||| || |||||||||||||| ||| | ||||| || ||| Sbjct: 505 aaagtcggttcatccgaggctgcgcttcttgccaagcttggaatcaggcccttttcgtat 564 Query: 204 gg 205 || Sbjct: 565 gg 566 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 333 atctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgtt 392 ||||| ||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||| Sbjct: 694 atctcttacccaaccgtagcagctgcgcctcacatgttcctcaatgcttacaagaacgtt 753 Query: 393 cttgc 397 ||||| Sbjct: 754 cttgc 758
>gb|AY070448.1| Arabidopsis thaliana At2g40010 mRNA sequence Length = 1373 Score = 99.6 bits (50), Expect = 1e-17 Identities = 149/182 (81%) Strand = Plus / Plus Query: 24 ggcaacactggtctggatccctcccagacgtccttcttccaggtgcttaacattcccacc 83 |||||||||||||| || || || ||||| |||||||||||||||||||||||||| ||| Sbjct: 589 ggcaacactggtcttgacccttcacagacctccttcttccaggtgcttaacattccaacc 648 Query: 84 aagattaacaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgac 143 || || ||||| ||||| || || || | | ||| |||||||| |||||||| || ||| Sbjct: 649 aaaatcaacaaaggtacggttgagatcataacccctgtggagctcatcaagaaaggcgac 708 Query: 144 aaggtgggctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatat 203 || || || || || ||| |||| || |||||||||||||| ||| | ||||| || ||| Sbjct: 709 aaagtcggttcatccgaggctgcgcttcttgccaagcttggaatcaggcccttttcgtat 768 Query: 204 gg 205 || Sbjct: 769 gg 770 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 333 atctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgtt 392 ||||| ||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||| Sbjct: 898 atctcttacccaaccgtagcagctgcgcctcacatgttcctcaatgcttacaagaacgtt 957 Query: 393 cttgc 397 ||||| Sbjct: 958 cttgc 962
>gb|AF002109.3| Arabidopsis thaliana chromosome 2 clone T28M21 map CIC10A06, complete sequence Length = 108847 Score = 99.6 bits (50), Expect = 1e-17 Identities = 149/182 (81%) Strand = Plus / Minus Query: 24 ggcaacactggtctggatccctcccagacgtccttcttccaggtgcttaacattcccacc 83 |||||||||||||| || || || ||||| |||||||||||||||||||||||||| ||| Sbjct: 77890 ggcaacactggtcttgacccttcacagacctccttcttccaggtgcttaacattccaacc 77831 Query: 84 aagattaacaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgac 143 || || ||||| ||||| || || || | | ||| |||||||| |||||||| || ||| Sbjct: 77830 aaaatcaacaaaggtacggttgagatcataacccctgtggagctcatcaagaaaggcgac 77771 Query: 144 aaggtgggctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatat 203 || || || || || ||| |||| || |||||||||||||| ||| | ||||| || ||| Sbjct: 77770 aaagtcggttcatccgaggctgcgcttcttgccaagcttggaatcaggcccttttcgtat 77711 Query: 204 gg 205 || Sbjct: 77710 gg 77709 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 333 atctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgtt 392 ||||| ||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||| Sbjct: 77581 atctcttacccaaccgtagcagctgcgcctcacatgttcctcaatgcttacaagaacgtt 77522 Query: 393 cttgc 397 ||||| Sbjct: 77521 cttgc 77517
>emb|BX819391.1|CNS0A9W8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB74ZC11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 961 Score = 99.6 bits (50), Expect = 1e-17 Identities = 149/182 (81%) Strand = Plus / Plus Query: 24 ggcaacactggtctggatccctcccagacgtccttcttccaggtgcttaacattcccacc 83 |||||||||||||| || || || ||||| |||||||||||||||||||||||||| ||| Sbjct: 241 ggcaacactggtcttgacccttcacagacctccttcttccaggtgcttaacattccaacc 300 Query: 84 aagattaacaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgac 143 || || ||||| ||||| || || || | | ||| |||||||| |||||||| || ||| Sbjct: 301 aaaatcaacaaaggtacggttgagatcataacccctgtggagctcatcaagaaaggcgac 360 Query: 144 aaggtgggctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatat 203 || || || || || ||| |||| || |||||||||||||| ||| | ||||| || ||| Sbjct: 361 aaagtcggttcatccgaggctgcgcttcttgccaagcttggaatcaggcccttttcgtat 420 Query: 204 gg 205 || Sbjct: 421 gg 422 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 364 acatgttcctcaatgcatacaagaatgttcttgc 397 |||||||||||||||| |||||||| |||||||| Sbjct: 581 acatgttcctcaatgcttacaagaacgttcttgc 614
>gb|BT001919.1| Arabidopsis thaliana clone C105444 putative 60S acidic ribosomal protein P0 (At2g40010) mRNA, complete cds Length = 985 Score = 99.6 bits (50), Expect = 1e-17 Identities = 149/182 (81%) Strand = Plus / Plus Query: 24 ggcaacactggtctggatccctcccagacgtccttcttccaggtgcttaacattcccacc 83 |||||||||||||| || || || ||||| |||||||||||||||||||||||||| ||| Sbjct: 385 ggcaacactggtcttgacccttcacagacctccttcttccaggtgcttaacattccaacc 444 Query: 84 aagattaacaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgac 143 || || ||||| ||||| || || || | | ||| |||||||| |||||||| || ||| Sbjct: 445 aaaatcaacaaaggtacggttgagatcataacccctgtggagctcatcaagaaaggcgac 504 Query: 144 aaggtgggctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatat 203 || || || || || ||| |||| || |||||||||||||| ||| | ||||| || ||| Sbjct: 505 aaagtcggttcatccgaggctgcgcttcttgccaagcttggaatcaggcccttttcgtat 564 Query: 204 gg 205 || Sbjct: 565 gg 566 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 333 atctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgtt 392 ||||| ||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||| Sbjct: 694 atctcttacccaaccgtagcagctgcgcctcacatgttcctcaatgcttacaagaacgtt 753 Query: 393 cttgc 397 ||||| Sbjct: 754 cttgc 758
>emb|BX816288.1|CNS0AE9F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH39ZH02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1296 Score = 89.7 bits (45), Expect = 1e-14 Identities = 132/161 (81%) Strand = Plus / Minus Query: 24 ggcaacactggtctggatccctcccagacgtccttcttccaggtgcttaacattcccacc 83 |||||||||||||| || || || ||||| |||||||||||||||||||||||||| ||| Sbjct: 1089 ggcaacactggtcttgacccttcacagacctccttcttccaggtgcttaacattccaacc 1030 Query: 84 aagattaacaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgac 143 || || ||||| ||||| || || || | | ||| || ||||| |||||||| || ||| Sbjct: 1029 aaaatcaacaaaggtacggttgagatcataacccctgtagagctcatcaagaaaggcgac 970 Query: 144 aaggtgggctcctctgagtctgccctgcttgccaagcttgg 184 || || || || || ||| |||| || |||||||||||||| Sbjct: 969 aaagtcggttcatccgaggctgcgcttcttgccaagcttgg 929 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 333 atctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgtt 392 ||||| ||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||| Sbjct: 780 atctcttacccaaccgtagcagctgcgcctcacatgttcctcaatgcttacaagaacgtt 721 Query: 393 cttgc 397 ||||| Sbjct: 720 cttgc 716
>gb|DQ235177.1| Solanum tuberosum clone 157H11 acidic ribosomal protein P1a-like mRNA, complete cds Length = 567 Score = 60.0 bits (30), Expect = 9e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 502 ctggtggtgccgccgctgctgcccccaaggaggaggagaagaaggaagaacccgaggagg 561 ||||||||||||| ||||||||||| | ||||| ||||||||||| ||| |||| | Sbjct: 300 ctggtggtgccgcagctgctgcccctgctgctgaggaaaagaaggaagagcccaaggaag 359 Query: 562 aatcagatggcgagatgggattcagtctgtttga 595 || |||| ||| |||||||||||||||||||| Sbjct: 360 aaagtgatgacgatatgggattcagtctgtttga 393
>gb|AC098745.4| Mus musculus BAC clone RP23-122P16 from 18, complete sequence Length = 213331 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 478 ttgctgctcctgctgctgctgcctctggtggtg 510 ||||||||||||||||||||||||||| ||||| Sbjct: 103549 ttgctgctcctgctgctgctgcctctgctggtg 103581 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 487 ctgctgctgctgcctctggtggtgcc 512 |||||||||||||||||| ||||||| Sbjct: 103842 ctgctgctgctgcctctgctggtgcc 103867
>gb|AC104610.13| Drosophila melanogaster 3L BAC RP98-35J16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 138534 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 480 gctgctcctgctgctgctgcctctggtggtgccgccgctgctgc 523 |||||| |||||||||||||| ||| || ||||||||||||||| Sbjct: 106225 gctgctgctgctgctgctgccgctgctgctgccgccgctgctgc 106182 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 472 ttgccgttgctgctcctgctgctgctgc 499 |||| ||||||||| ||||||||||||| Sbjct: 13802 ttgcagttgctgctgctgctgctgctgc 13829
>ref|NM_078514.2| Drosophila melanogaster brinker CG9653-RA (brk), mRNA Length = 3672 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 480 gctgctcctgctgctgctgcctctggtggtgccgccgctgctgc 523 |||||| |||||||||||||| ||| || ||||||||||||||| Sbjct: 1098 gctgctgctgctgctgctgccgctgctgctgccgccgctgctgc 1055
>gb|AY052069.1| Drosophila melanogaster SD02279 full length cDNA Length = 1958 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 480 gctgctcctgctgctgctgcctctggtggtgccgccgctgctgc 523 |||||| |||||||||||||| ||| || ||||||||||||||| Sbjct: 145 gctgctgctgctgctgctgccgctgctgctgccgccgctgctgc 102
>gb|AF125986.1|AF125986 Drosophila melanogaster putative transcription factor (brinker) mRNA, complete cds Length = 3654 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 480 gctgctcctgctgctgctgcctctggtggtgccgccgctgctgc 523 |||||| |||||||||||||| ||| || ||||||||||||||| Sbjct: 1097 gctgctgctgctgctgctgccgctgctgctgccgccgctgctgc 1054
>gb|AE003440.3| Drosophila melanogaster chromosome X, section 24 of 74 of the complete sequence Length = 342195 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 480 gctgctcctgctgctgctgcctctggtggtgccgccgctgctgc 523 |||||| |||||||||||||| ||| || ||||||||||||||| Sbjct: 137612 gctgctgctgctgctgctgccgctgctgctgccgccgctgctgc 137569 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 472 ttgccgttgctgctcctgctgctgctgc 499 |||| ||||||||| ||||||||||||| Sbjct: 45189 ttgcagttgctgctgctgctgctgctgc 45216
>dbj|AB023583.1| Drosophila melanogaster brinker mRNA for Brk, complete cds Length = 3181 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 480 gctgctcctgctgctgctgcctctggtggtgccgccgctgctgc 523 |||||| |||||||||||||| ||| || ||||||||||||||| Sbjct: 1098 gctgctgctgctgctgctgccgctgctgctgccgccgctgctgc 1055
>gb|BT016538.1| Zea mays clone Contig371 mRNA sequence Length = 707 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 534 gaggagaagaaggaagaacccgaggaggaatcagatggcgagatgggattcagtctgtt 592 ||||||||||||||||| ||| ||||||| || |||| ||| ||||| ||||| ||||| Sbjct: 356 gaggagaagaaggaagagcccaaggaggagtctgatgacgacatgggcttcagcctgtt 414
>ref|XM_755686.1| Ustilago maydis 521 hypothetical protein (UM04632.1) partial mRNA Length = 336 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 509 tgccgccgctgctgcccccaaggaggaggagaagaagga 547 ||||||||| | |||| |||||||||||||||||||||| Sbjct: 246 tgccgccgcgggtgccgccaaggaggaggagaagaagga 284
>gb|DQ306774.1| Hevea brasiliensis isolate SSH45 mRNA sequence Length = 308 Score = 54.0 bits (27), Expect = 6e-04 Identities = 132/167 (79%) Strand = Plus / Plus Query: 225 tatgacagtgggtcagtcttcagccccgaggttcttgacctcactgaggaagatctgatg 284 ||||||| ||| || || |||||||| ||||| ||||| || ||||| || ||||| | Sbjct: 83 tatgacaatggctctgtattcagcccagaggtgcttgatctgactgaagatgatcttgtt 142 Query: 285 gacaagtttgcttctggtgtttccatggttgcctcactgtccctggcgatctcatacccc 344 || |||||||| ||||||| |||||||| | ||| | | |||| || |||||||| Sbjct: 143 gagaagtttgcaactggtgtctccatggtcacttcattagcattggccatatcataccca 202 Query: 345 accatggctgctgcaccgcacatgttcctcaatgcatacaagaatgt 391 || |||| |||||||| ||||||||| | ||||| ||||||||||| Sbjct: 203 actctggcagctgcaccacacatgttcgttaatgcctacaagaatgt 249
>gb|DQ306752.1| Hevea brasiliensis isolate SSH23 mRNA sequence Length = 308 Score = 54.0 bits (27), Expect = 6e-04 Identities = 132/167 (79%) Strand = Plus / Plus Query: 225 tatgacagtgggtcagtcttcagccccgaggttcttgacctcactgaggaagatctgatg 284 ||||||| ||| || || |||||||| ||||| ||||| || ||||| || ||||| | Sbjct: 83 tatgacaatggctctgtattcagcccagaggtgcttgatctgactgaagatgatcttgtt 142 Query: 285 gacaagtttgcttctggtgtttccatggttgcctcactgtccctggcgatctcatacccc 344 || |||||||| ||||||| |||||||| | ||| | | |||| || |||||||| Sbjct: 143 gagaagtttgcaactggtgtctccatggtcacttcattagcattggccatatcataccca 202 Query: 345 accatggctgctgcaccgcacatgttcctcaatgcatacaagaatgt 391 || |||| |||||||| ||||||||| | ||||| ||||||||||| Sbjct: 203 actctggcagctgcaccacacatgttcgttaatgcctacaagaatgt 249
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 46 cccagacgtccttcttccaggtgcttaacattcccaccaagattaacaagggta 99 ||||||||||||||||||||| ||| |||||| | || |||||| |||||||| Sbjct: 580972 cccagacgtccttcttccaggcgctgaacattgcgacgaagattgccaagggta 581025 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 46 cccagacgtccttcttccaggtgcttaacattcccaccaagattaacaagggta 99 ||||||||||||||||||||| ||| |||||| | || |||||| |||||||| Sbjct: 578573 cccagacgtccttcttccaggcgctgaacattgcgacgaagattgccaagggta 578626
>gb|AY702006.1| Leishmania donovani strain MHOM/IN/1983/AG83 60S ribosomal protein mRNA, partial cds Length = 1147 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 46 cccagacgtccttcttccaggtgcttaacattcccaccaagattaacaagggta 99 ||||||||||||||||||||| ||| |||||| | || |||||| |||||||| Sbjct: 397 cccagacgtccttcttccaggcgctgaacattgcgacgaagattgccaagggta 450
>ref|XM_843003.1| Leishmania major strain Friedlin 60S acidic ribosomal subunit protein (LMJ_0399) partial mRNA Length = 972 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 46 cccagacgtccttcttccaggtgcttaacattcccaccaagattaacaagggta 99 ||||||||||||||||||||| ||| |||||| | || |||||| |||||||| Sbjct: 419 cccagacgtccttcttccaggcgctgaacattgcgacgaagattgccaagggta 472
>ref|XM_843004.1| Leishmania major strain Friedlin 60S acidic ribosomal subunit protein (LMJ_0400) partial mRNA Length = 972 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 46 cccagacgtccttcttccaggtgcttaacattcccaccaagattaacaagggta 99 ||||||||||||||||||||| ||| |||||| | || |||||| |||||||| Sbjct: 419 cccagacgtccttcttccaggcgctgaacattgcgacgaagattgccaagggta 472
>emb|X72714.1|LILIPOA L. infantum LiPO-A and LiPO-B gene Length = 3790 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 46 cccagacgtccttcttccaggtgcttaacattcccaccaagattaacaagggta 99 ||||||||||||||||||||| ||| |||||| | || |||||| |||||||| Sbjct: 3032 cccagacgtccttcttccaggcgctgaacattgcgacgaagattgccaagggta 3085 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 46 cccagacgtccttcttccaggtgcttaacattcccaccaagattaacaagggta 99 ||||||||||||||||||||| ||| |||||| | || |||||| |||||||| Sbjct: 663 cccagacgtccttcttccaggcgctgaacattgcgacgaagattgccaagggta 716
>gb|AY180912.1| Leishmania donovani ribosomal protein P0-like mRNA, complete sequence Length = 1664 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 46 cccagacgtccttcttccaggtgcttaacattcccaccaagattaacaagggta 99 ||||||||||||||||||||| ||| |||||| | || |||||| |||||||| Sbjct: 452 cccagacgtccttcttccaggcgctgaacattgcgacgaagattgccaagggta 505
>gb|AC107666.13| Mus musculus chromosome 5, clone RP23-111M3, complete sequence Length = 230189 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 479 tgctgctcctgctgctgctgcctctggtggtgccgccgctgctgcc 524 ||||||| |||||| |||||| |||| || |||||||||||||||| Sbjct: 204725 tgctgctgctgctgttgctgcttctgctgctgccgccgctgctgcc 204770
>emb|AL935331.9| Mouse DNA sequence from clone RP24-264J19 on chromosome 2, complete sequence Length = 144436 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgcctctggtggtgccgccgctgc 520 ||||||| |||||||||||||||||| || ||| |||||||| Sbjct: 10851 tgctgctgctgctgctgctgcctctgctgctgctgccgctgc 10810 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgcctctggtggtgccgccgctgctgcc 524 ||||||| |||||||||||||||||| || ||| || ||||||||| Sbjct: 10716 tgctgctgctgctgctgctgcctctgctgctgctgctgctgctgcc 10671 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgcctctggtggtgccgccgctgctgc 523 ||||||| |||||||||||||||||| || ||| || |||||||| Sbjct: 10887 tgctgctgctgctgctgctgcctctgctgctgctgctgctgctgc 10843 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgcctctggtggtgccgccgctgctgcc 524 ||||||| |||||||||||||| ||| || ||| || ||||||||| Sbjct: 10911 tgctgctgctgctgctgctgccactgctgctgctgctgctgctgcc 10866 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgcctctggtggtgccgccgctgctgcc 524 ||||||| |||||||||||| ||||| || ||| || ||||||||| Sbjct: 10740 tgctgctgctgctgctgctgtctctgctgctgctgctgctgctgcc 10695 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgcctctggtggtgccgccgctgctgc 523 ||||||| ||||||||||||| ||| || ||| ||||||||||| Sbjct: 11073 tgctgctgctgctgctgctgctgctgctgctgctgccgctgctgc 11029 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgcctctggtggtgccgccgctgctgc 523 ||||||| ||||||||||||| ||| || |||||| |||||||| Sbjct: 11070 tgctgctgctgctgctgctgctgctgctgctgccgctgctgctgc 11026 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgcctctggtggtgccgccgctgctgc 523 ||||||| |||||||||||||| ||| || ||| || |||||||| Sbjct: 11058 tgctgctgctgctgctgctgccgctgctgctgctgctgctgctgc 11014 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 487 ctgctgctgctgcctctggtggtgccgccgctgctgc 523 |||||||||||||||||| || ||| || |||||||| Sbjct: 10930 ctgctgctgctgcctctgctgctgctgctgctgctgc 10894 Score = 40.1 bits (20), Expect = 8.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgcctctggtggtgccgccgctgctg 522 ||||||| |||||||||||||| ||| || ||| || ||||||| Sbjct: 10692 tgctgctgctgctgctgctgccgctgctgctgctgctgctgctg 10649
>gb|L29300.1|LEIRIBPP Leishmania chagasi (clone C1) ribosomal protein P0 gene, complete cds Length = 1373 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 46 cccagacgtccttcttccaggtgcttaacattcccaccaagattaacaagggta 99 ||||||||||||||||||||| ||| |||||| | || |||||| |||||||| Sbjct: 496 cccagacgtccttcttccaggcgctgaacattgcgacgaagattgccaagggta 549
>gb|AC147782.8| Mus musculus chromosome 12, clone RP24-284A21, complete sequence Length = 155158 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 480 gctgctcctgctgctgctgcctctg 504 ||||||||||||||||||||||||| Sbjct: 113915 gctgctcctgctgctgctgcctctg 113939
>gb|AC154527.2| Mus musculus BAC clone RP23-221K13 from chromosome 14, complete sequence Length = 215802 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 480 gctgctcctgctgctgctgcctctg 504 ||||||||||||||||||||||||| Sbjct: 94744 gctgctcctgctgctgctgcctctg 94768
>ref|XM_364091.1| Magnaporthe grisea 70-15 hypothetical protein (MG08936.4) partial mRNA Length = 2208 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgcctctggtggtgccg 513 ||||||||| ||||||||||||| |||||||||||| Sbjct: 1843 gttgctgctgctgctgctgctgctgctggtggtgccg 1807
>ref|XM_462591.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G25564g) partial mRNA Length = 318 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 479 tgctgctcctgctgctgctgcctctggtggtgccgccgctgctgc 523 ||||||||||||||||||| | |||| |||||||| |||||||| Sbjct: 189 tgctgctcctgctgctgctcctgctggcggtgccgcagctgctgc 233
>gb|BC042571.1| Homo sapiens polymerase (DNA directed), gamma, mRNA (cDNA clone MGC:21267 IMAGE:4384475), complete cds Length = 4440 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgcctctggtggtgccgccgctgctgccc 525 ||||||||| ||||||||||||| ||| || ||||||||| ||||||| Sbjct: 427 gttgctgctgctgctgctgctgctgctgctgctgccgccgccgctgccc 379
>gb|AC165092.3| Mus musculus BAC clone RP23-10M2 from chromosome 14, complete sequence Length = 215949 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 480 gctgctcctgctgctgctgcctctg 504 ||||||||||||||||||||||||| Sbjct: 4245 gctgctcctgctgctgctgcctctg 4221
>gb|AC125308.3| Mus musculus BAC clone RP24-481N17 from chromosome 5, complete sequence Length = 128910 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 480 gctgctcctgctgctgctgcctctg 504 ||||||||||||||||||||||||| Sbjct: 85903 gctgctcctgctgctgctgcctctg 85927 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 479 tgctgctcctgctgctgctgcctct 503 ||||||| ||||||||||||||||| Sbjct: 86009 tgctgctgctgctgctgctgcctct 86033
>gb|AC124068.6| Homo sapiens chromosome 15, clone RP11-217B1, complete sequence Length = 172505 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 477 gttgctgctcctgctgctgctgcctctggtggtgccgccgctgctgccc 525 ||||||||| ||||||||||||| ||| || ||||||||| ||||||| Sbjct: 167174 gttgctgctgctgctgctgctgctgctgctgctgccgccgccgctgccc 167222
>ref|XM_763546.1| Giardia lamblia ATCC 50803 ribosomal phosphoprotein (GLP_108_33730_32750) partial mRNA Length = 981 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 468 aagtttgccgttgctgctcctgctgctgc 496 ||||||||||||||||||||||| ||||| Sbjct: 826 aagtttgccgttgctgctcctgcggctgc 854
>gb|BC050559.1| Homo sapiens polymerase (DNA directed), gamma, mRNA (cDNA clone MGC:57709 IMAGE:6042595), complete cds Length = 4503 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgcctctggtggtgccgccgctgctgccc 525 ||||||||| ||||||||||||| ||| || ||||||||| ||||||| Sbjct: 411 gttgctgctgctgctgctgctgctgctgctgctgccgccgccgctgccc 363
>ref|NM_002693.1| Homo sapiens polymerase (DNA directed), gamma (POLG), mRNA Length = 4465 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgcctctggtggtgccgccgctgctgccc 525 ||||||||| ||||||||||||| ||| || ||||||||| ||||||| Sbjct: 442 gttgctgctgctgctgctgctgctgctgctgctgccgccgccgctgccc 394
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 479 tgctgctcctgctgctgctgcctctggtggtgccgccgctgctgc 523 ||||||||||||||||||| | |||| |||||||| |||||||| Sbjct: 1948033 tgctgctcctgctgctgctcctgctggcggtgccgcagctgctgc 1948077
>gb|AC010009.7| Drosophila melanogaster 3L BAC RP98-23D16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 195757 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 441 atcaaggagtacctcaaggacccgagcaagtttgccg 477 |||||||||||| |||||||||| |||||||| |||| Sbjct: 186098 atcaaggagtacatcaaggaccccagcaagttcgccg 186062 Score = 40.1 bits (20), Expect = 8.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 488 tgctgctgctgcctctggtggtgccgccgctgctgc 523 |||||||||||| |||||||||| || |||||||| Sbjct: 180273 tgctgctgctgctgctggtggtgctgctgctgctgc 180308 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctg 498 |||||||||||||||||||| Sbjct: 43164 tgctgctcctgctgctgctg 43145
>gb|AC010011.5| Drosophila melanogaster 3L BAC RP98-17D14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167026 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 441 atcaaggagtacctcaaggacccgagcaagtttgccg 477 |||||||||||| |||||||||| |||||||| |||| Sbjct: 140084 atcaaggagtacatcaaggaccccagcaagttcgccg 140120 Score = 40.1 bits (20), Expect = 8.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 488 tgctgctgctgcctctggtggtgccgccgctgctgc 523 |||||||||||| |||||||||| || |||||||| Sbjct: 145909 tgctgctgctgctgctggtggtgctgctgctgctgc 145874
>ref|NM_079487.2| Drosophila melanogaster Ribosomal protein LP0 CG7490-RA (RpLP0), mRNA Length = 1262 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 441 atcaaggagtacctcaaggacccgagcaagtttgccg 477 |||||||||||| |||||||||| |||||||| |||| Sbjct: 928 atcaaggagtacatcaaggaccccagcaagttcgccg 964
>gb|AY075528.1| Drosophila melanogaster RE74511 full length cDNA Length = 1277 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 441 atcaaggagtacctcaaggacccgagcaagtttgccg 477 |||||||||||| |||||||||| |||||||| |||| Sbjct: 928 atcaaggagtacatcaaggaccccagcaagttcgccg 964
>gb|AC005317.2| Homo sapiens chromosome 15q26.1 clone PAC pDJ457j11 containing DNA polymerase gamma (polg) gene, complete sequence Length = 170612 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 477 gttgctgctcctgctgctgctgcctctggtggtgccgccgctgctgccc 525 ||||||||| ||||||||||||| ||| || ||||||||| ||||||| Sbjct: 84409 gttgctgctgctgctgctgctgctgctgctgctgccgccgccgctgccc 84457
>gb|AC148174.7| Mus musculus chromosome 19, clone RP23-300E3, complete sequence Length = 166901 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 480 gctgctcctgctgctgctgcctctg 504 ||||||||||||||||||||||||| Sbjct: 18387 gctgctcctgctgctgctgcctctg 18363
>gb|BT021447.1| Drosophila melanogaster GH01513 full insert cDNA Length = 1674 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 441 atcaaggagtacctcaaggacccgagcaagtttgccg 477 |||||||||||| |||||||||| |||||||| |||| Sbjct: 1314 atcaaggagtacatcaaggaccccagcaagttcgccg 1350
>emb|X98093.1|MIHSDNAPL H.sapiens mRNA for DNA polymerase gamma, mitochondrial protein Length = 4465 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgcctctggtggtgccgccgctgctgccc 525 ||||||||| ||||||||||||| ||| || ||||||||| ||||||| Sbjct: 442 gttgctgctgctgctgctgctgctgctgctgctgccgccgccgctgccc 394
>gb|AE003596.5| Drosophila melanogaster chromosome 3L, section 77 of 83 of the complete sequence Length = 249021 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 441 atcaaggagtacctcaaggacccgagcaagtttgccg 477 |||||||||||| |||||||||| |||||||| |||| Sbjct: 202451 atcaaggagtacatcaaggaccccagcaagttcgccg 202487 Score = 40.1 bits (20), Expect = 8.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 488 tgctgctgctgcctctggtggtgccgccgctgctgc 523 |||||||||||| |||||||||| || |||||||| Sbjct: 208276 tgctgctgctgctgctggtggtgctgctgctgctgc 208241
>gb|U60325.1|HSU60325 Human DNA polymerase gamma mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 4320 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgcctctggtggtgccgccgctgctgccc 525 ||||||||| ||||||||||||| ||| || ||||||||| ||||||| Sbjct: 319 gttgctgctgctgctgctgctgctgctgctgctgccgccgccgctgccc 271
>gb|AC132123.3| Mus musculus BAC clone RP24-79F8 from 1, complete sequence Length = 214923 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgcctct 503 ||||||||||||||||||||||||| Sbjct: 80869 tgctgctcctgctgctgctgcctct 80845
>gb|AC168068.3| Mus musculus BAC clone RP23-99G15 from chromosome 8, complete sequence Length = 237728 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 480 gctgctcctgctgctgctgcctctg 504 ||||||||||||||||||||||||| Sbjct: 49374 gctgctcctgctgctgctgcctctg 49350
>gb|U74651.1|HSU74651 Human DNA polymerase gamma (polg) gene, promoter region and partial cds Length = 8699 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgcctctggtggtgccgccgctgctgccc 525 ||||||||| ||||||||||||| ||| || ||||||||| ||||||| Sbjct: 5467 gttgctgctgctgctgctgctgctgctgctgctgccgccgccgctgccc 5419
>gb|AC171332.1| Mus musculus BAC clone RP24-270O6 from chromosome 8, complete sequence Length = 127432 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 480 gctgctcctgctgctgctgcctctg 504 ||||||||||||||||||||||||| Sbjct: 21834 gctgctcctgctgctgctgcctctg 21858
>emb|AL626765.22| Mouse DNA sequence from clone RP23-179N14 on chromosome 19, complete sequence Length = 206196 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 480 gctgctcctgctgctgctgcctctg 504 ||||||||||||||||||||||||| Sbjct: 36502 gctgctcctgctgctgctgcctctg 36526
>gb|M25772.1|DROAP3A Drosophila melanogaster DNA repair protein (AP3) mRNA, complete cds Length = 1193 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 441 atcaaggagtacctcaaggacccgagcaagtttgccg 477 |||||||||||| |||||||||| |||||||| |||| Sbjct: 860 atcaaggagtacatcaaggaccccagcaagttcgccg 896
>gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete sequence Length = 181148 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 472 ttgccgttgctgctcctgctgctgctgc 499 |||||||||||||| ||||||||||||| Sbjct: 70432 ttgccgttgctgctgctgctgctgctgc 70459
>gb|AC135667.5| Mus musculus BAC clone RP24-536G18 from chromosome 13, complete sequence Length = 166185 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaagaa 551 |||||||||||||||||||||||| Sbjct: 82808 aaggaggaggagaagaaggaagaa 82831
>gb|AC007890.6| Drosophila melanogaster clone BACR02G21, complete sequence Length = 171563 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 477 gttgctgctcctgctgctgctgcctctg 504 ||||||||||||||||||||||| |||| Sbjct: 82780 gttgctgctcctgctgctgctgcttctg 82807 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 tgctgctcctgctgctgctgc 499 ||||||||||||||||||||| Sbjct: 108939 tgctgctcctgctgctgctgc 108959
>gb|AC122117.10| Mus musculus chromosome 18, clone RP23-61O22, complete sequence Length = 207024 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaagaa 551 |||||||||||||||||||||||| Sbjct: 120163 aaggaggaggagaagaaggaagaa 120186 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaagga 547 |||||||||||||||||||| Sbjct: 119837 aaggaggaggagaagaagga 119856
>gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosome 5, complete sequence Length = 209986 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgcctctggtggtg 510 ||||||| |||||||||||||||||| ||||| Sbjct: 97884 tgctgctgctgctgctgctgcctctgctggtg 97853
>gb|AC164402.3| Mus musculus chromosome 15, clone RP23-463G20, complete sequence Length = 196916 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 282 atggacaagtttgcttctggtgtttcca 309 ||||||||| |||||||||||||||||| Sbjct: 96023 atggacaagcttgcttctggtgtttcca 95996
>ref|XM_973057.1| PREDICTED: Mus musculus hypothetical protein LOC669103 (LOC669103), mRNA Length = 471 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgcctctggtggtgccgccgctgctgcccc 526 ||||||| ||||||||||||| ||| || ||| |||||||||||||| Sbjct: 224 tgctgctgctgctgctgctgctgctgctgctgctgccgctgctgcccc 177 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgc 499 ||||||||||||||||||||| Sbjct: 350 tgctgctcctgctgctgctgc 330 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 473 tgccgttgctgctcctgctgctgctgcc 500 ||||| |||||| ||||||||||||||| Sbjct: 191 tgccgctgctgcccctgctgctgctgcc 164
>ref|XM_973504.1| PREDICTED: Mus musculus hypothetical protein LOC664943 (LOC664943), mRNA Length = 471 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgcctctggtggtgccgccgctgctgcccc 526 ||||||| ||||||||||||| ||| || ||| |||||||||||||| Sbjct: 224 tgctgctgctgctgctgctgctgctgctgctgctgccgctgctgcccc 177 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgc 499 ||||||||||||||||||||| Sbjct: 350 tgctgctcctgctgctgctgc 330 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 473 tgccgttgctgctcctgctgctgctgcc 500 ||||| |||||| ||||||||||||||| Sbjct: 191 tgccgctgctgcccctgctgctgctgcc 164
>ref|XM_975074.1| PREDICTED: Mus musculus hypothetical protein LOC674490 (LOC674490), mRNA Length = 471 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgcctctggtggtgccgccgctgctgcccc 526 ||||||| ||||||||||||| ||| || ||| |||||||||||||| Sbjct: 224 tgctgctgctgctgctgctgctgctgctgctgctgccgctgctgcccc 177 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgc 499 ||||||||||||||||||||| Sbjct: 350 tgctgctcctgctgctgctgc 330 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 473 tgccgttgctgctcctgctgctgctgcc 500 ||||| |||||| ||||||||||||||| Sbjct: 191 tgccgctgctgcccctgctgctgctgcc 164
>gb|AC132685.3| Mus musculus BAC clone RP23-278G24 from chromosome 7, complete sequence Length = 188989 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Plus Query: 479 tgctgctcctgctgctgctgcctctggtggtgccgccgctgctgcccc 526 ||||||| ||||||||||||| ||| || ||| |||||||||||||| Sbjct: 185159 tgctgctgctgctgctgctgctgctgctgctgctgccgctgctgcccc 185206 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 tgctgctcctgctgctgctgc 499 ||||||||||||||||||||| Sbjct: 185033 tgctgctcctgctgctgctgc 185053 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 473 tgccgttgctgctcctgctgctgctgcc 500 ||||| |||||| ||||||||||||||| Sbjct: 185192 tgccgctgctgcccctgctgctgctgcc 185219
>gb|BC042186.1| Homo sapiens cDNA clone IMAGE:5393404, partial cds Length = 814 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaagaa 551 |||||||||||||||||||||||| Sbjct: 670 aaggaggaggagaagaaggaagaa 693 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaagaa 551 |||||||||||||||||||||||| Sbjct: 502 aaggaggaggagaagaaggaagaa 525
>emb|Z84486.1|HS528L19 Human DNA sequence from clone RP3-528L19 on chromosome 6q23 Contains part of the SGK gene for serum/glucocorticoid regulated kinase, complete sequence Length = 87013 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaagaa 551 |||||||||||||||||||||||| Sbjct: 9990 aaggaggaggagaagaaggaagaa 10013
>ref|XM_795562.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC591398 (LOC591398), mRNA Length = 2148 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaagaa 551 |||||||||||||||||||||||| Sbjct: 730 aaggaggaggagaagaaggaagaa 753
>emb|BX071599.1|CNS09RER Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC9AG12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 322 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Minus Query: 442 tcaaggagtacctcaaggacccgagcaagtttgccg 477 ||||||||| | ||||||||||||||||||| |||| Sbjct: 131 tcaaggagttcatcaaggacccgagcaagttcgccg 96
>emb|BX052086.1|CNS09CCQ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC3AB05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 956 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Minus Query: 442 tcaaggagtacctcaaggacccgagcaagtttgccg 477 ||||||||| | ||||||||||||||||||| |||| Sbjct: 433 tcaaggagttcatcaaggacccgagcaagttcgccg 398
>emb|BX052085.1|CNS09CCP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC3AB05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1013 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 442 tcaaggagtacctcaaggacccgagcaagtttgccg 477 ||||||||| | ||||||||||||||||||| |||| Sbjct: 871 tcaaggagttcatcaaggacccgagcaagttcgccg 906
>gb|AC164627.4| Mus musculus 10 BAC RP23-382A18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 192275 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 472 ttgccgttgctgctcctgctgctgctgc 499 |||| ||||||||||||||||||||||| Sbjct: 11075 ttgctgttgctgctcctgctgctgctgc 11048 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 469 agtttgccgttgctgctcctgctgctgctgc 499 ||||||| ||||||||||||||| ||||||| Sbjct: 13471 agtttgctgttgctgctcctgctcctgctgc 13441 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 472 ttgccgttgctgctcctgctgctgct 497 |||| ||||||||||||||||||||| Sbjct: 13534 ttgctgttgctgctcctgctgctgct 13509 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 472 ttgccgttgctgctcctgctgctgct 497 |||| ||||||||||||||||||||| Sbjct: 12868 ttgctgttgctgctcctgctgctgct 12843 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgc 499 ||||||||||||||||||||| Sbjct: 19041 tgctgctcctgctgctgctgc 19021 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgc 499 ||||||||||||||||||||| Sbjct: 13836 tgctgctcctgctgctgctgc 13816
>gb|AC010574.5| Drosophila melanogaster 3L BAC RP98-7L7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 162402 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 472 ttgccgttgctgctcctgctgctgctgc 499 |||| ||||||||||||||||||||||| Sbjct: 102940 ttgctgttgctgctcctgctgctgctgc 102913
>tpg|BK003116.1| TPA: TPA_inf: Drosophila melanogaster HDC18498 (HDC18498) gene, partial cds Length = 1319 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 472 ttgccgttgctgctcctgctgctgctgc 499 |||||||||||||| ||||||||||||| Sbjct: 801 ttgccgttgctgctgctgctgctgctgc 828
>dbj|AK021773.1| Homo sapiens cDNA FLJ11711 fis, clone HEMBA1005152 Length = 1839 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaagaa 551 |||||||||||||||||||||||| Sbjct: 1269 aaggaggaggagaagaaggaagaa 1292
>gb|AC069368.14| Homo sapiens chromosome 15, clone CTD-2017F17, complete sequence Length = 132080 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaagaa 551 |||||||||||||||||||||||| Sbjct: 15493 aaggaggaggagaagaaggaagaa 15516
>ref|NM_169816.1| Drosophila melanogaster fruitless CG14307-RB, transcript variant B (fru), mRNA Length = 2975 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgcctctg 504 ||||||||||||||||||||||| |||| Sbjct: 2897 gttgctgctcctgctgctgctgcttctg 2870
>ref|NM_168629.2| Drosophila melanogaster RhoGAP71E CG32149-RC, transcript variant C (RhoGAP71E), mRNA Length = 3359 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 472 ttgccgttgctgctcctgctgctgctgc 499 |||| ||||||||||||||||||||||| Sbjct: 2795 ttgctgttgctgctcctgctgctgctgc 2768
>ref|NM_079673.2| Drosophila melanogaster fruitless CG14307-RF, transcript variant F (fru), mRNA Length = 4576 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgcctctg 504 ||||||||||||||||||||||| |||| Sbjct: 4498 gttgctgctcctgctgctgctgcttctg 4471
>gb|AC019084.9| Homo sapiens BAC clone RP11-354O2 from 7, complete sequence Length = 201215 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 528 aaggaggaggagaagaaggaagaa 551 |||||||||||||||||||||||| Sbjct: 84945 aaggaggaggagaagaaggaagaa 84922 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 529 aggaggaggagaagaaggaagaa 551 ||||||||||||||||||||||| Sbjct: 85194 aggaggaggagaagaaggaagaa 85172 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 529 aggaggaggagaagaaggaagaa 551 ||||||||||||||||||||||| Sbjct: 84792 aggaggaggagaagaaggaagaa 84770 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 gaggaggagaagaaggaagaa 551 ||||||||||||||||||||| Sbjct: 85118 gaggaggagaagaaggaagaa 85098 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 gaggaggagaagaaggaagaa 551 ||||||||||||||||||||| Sbjct: 85081 gaggaggagaagaaggaagaa 85061 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 gaggaggagaagaaggaagaa 551 ||||||||||||||||||||| Sbjct: 84657 gaggaggagaagaaggaagaa 84637 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 528 aaggaggaggagaagaaggaagaa 551 |||||||||||| ||||||||||| Sbjct: 85173 aaggaggaggaggagaaggaagaa 85150 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 528 aaggaggaggagaagaaggaagaa 551 |||||||||||| ||||||||||| Sbjct: 84712 aaggaggaggaggagaaggaagaa 84689 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 aggaggaggagaagaaggaa 548 |||||||||||||||||||| Sbjct: 84628 aggaggaggagaagaaggaa 84609
>dbj|AK157674.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830302H20 product:unclassifiable, full insert sequence Length = 1311 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 472 ttgccgttgctgctcctgctgctgctgc 499 |||||||||||||| ||||||||||||| Sbjct: 315 ttgccgttgctgctgctgctgctgctgc 342
>dbj|AK013560.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900019J01 product:hypothetical Serine-rich region profile containing protein, full insert sequence Length = 987 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgcctctggtggtgccgccgctgctgcccc 526 ||||||| ||||||||||||| ||| || ||| |||||||||||||| Sbjct: 413 tgctgctgctgctgctgctgctgctgctgctgctgccgctgctgcccc 366 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 473 tgccgttgctgctcctgctgctgctgcc 500 ||||| |||||| ||||||||||||||| Sbjct: 380 tgccgctgctgcccctgctgctgctgcc 353
>gb|AC092231.1|AC092231 Drosophila melanogaster, chromosome 2L, region 24D-24E, BAC clone BACR28B08, complete sequence Length = 155566 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 472 ttgccgttgctgctcctgctgctgctgc 499 |||||||||||||| ||||||||||||| Sbjct: 32379 ttgccgttgctgctgctgctgctgctgc 32406
>gb|AC153881.4| Mus musculus 10 BAC RP23-257B9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208992 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaagaa 551 |||||||||||||||||||||||| Sbjct: 90348 aaggaggaggagaagaaggaagaa 90371 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaaga 550 ||||||||||||||||||||||| Sbjct: 91146 aaggaggaggagaagaaggaaga 91168 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaaga 550 ||||||||||||||||||||||| Sbjct: 91097 aaggaggaggagaagaaggaaga 91119
>gb|AC008323.3|AC008323 Drosophila melanogaster, chromosome 2L, region 24D-24D, BAC clone BACR03G07, complete sequence Length = 170064 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 472 ttgccgttgctgctcctgctgctgctgc 499 |||||||||||||| ||||||||||||| Sbjct: 152385 ttgccgttgctgctgctgctgctgctgc 152412
>gb|AC122744.16| Mus musculus chromosome 5, clone RP23-37I24, complete sequence Length = 175214 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 472 ttgccgttgctgctcctgctgctgctgc 499 |||||||||||||| ||||||||||||| Sbjct: 109801 ttgccgttgctgctgctgctgctgctgc 109774 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 472 ttgccgttgctgctcctgctgctgctgc 499 |||| ||||||||| ||||||||||||| Sbjct: 109879 ttgctgttgctgctgctgctgctgctgc 109852
>dbj|AB178287.1| Neospora caninum NcRP1 mRNA for ribosomal protein P1, complete cds Length = 555 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 532 aggaggagaagaaggaagaacccgaggaggaa 563 ||||||||||||||||||| || ||||||||| Sbjct: 313 aggaggagaagaaggaagagcctgaggaggaa 344
>gb|AC127223.5| Mus musculus BAC clone RP24-484M18 from chromosome 7, complete sequence Length = 168323 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Plus Query: 479 tgctgctcctgctgctgctgcctctggtggtgccgccgctgctgcccc 526 ||||||| ||||||||||||| ||| || ||| |||||||||||||| Sbjct: 34545 tgctgctgctgctgctgctgctgctgctgctgctgccgctgctgcccc 34592 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 tgctgctcctgctgctgctgc 499 ||||||||||||||||||||| Sbjct: 34419 tgctgctcctgctgctgctgc 34439 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 473 tgccgttgctgctcctgctgctgctgcc 500 ||||| |||||| ||||||||||||||| Sbjct: 34578 tgccgctgctgcccctgctgctgctgcc 34605
>dbj|AB121072.1| Athalia rosae dpp mRNA for decapentaplegic protein, complete cds Length = 2566 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 472 ttgccgttgctgctcctgctgctgctgc 499 |||||||||||||| ||||||||||||| Sbjct: 2291 ttgccgttgctgctgctgctgctgctgc 2318
>ref|XM_563526.1| Anopheles gambiae str. PEST ENSANGP00000029439 (ENSANGG00000023377), partial mRNA Length = 1665 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 472 ttgccgttgctgctcctgctgctgctgc 499 |||||||||||||| ||||||||||||| Sbjct: 969 ttgccgttgctgctgctgctgctgctgc 942
>gb|AE003722.4| Drosophila melanogaster chromosome 3R, section 60 of 118 of the complete sequence Length = 221164 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 477 gttgctgctcctgctgctgctgcctctg 504 ||||||||||||||||||||||| |||| Sbjct: 31278 gttgctgctcctgctgctgctgcttctg 31305 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 479 tgctgctcctgctgctgctgcctctggtggtgc 511 ||||||| ||||||||||||| |||||||||| Sbjct: 212163 tgctgctgctgctgctgctgctgctggtggtgc 212195 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 472 ttgccgttgctgctcctgctgctgc 496 |||| |||||||||||||||||||| Sbjct: 210108 ttgctgttgctgctcctgctgctgc 210132 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 tgctgctcctgctgctgctgc 499 ||||||||||||||||||||| Sbjct: 57437 tgctgctcctgctgctgctgc 57457
>gb|AE003579.3| Drosophila melanogaster chromosome 2L, section 12 of 83 of the complete sequence Length = 304674 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 472 ttgccgttgctgctcctgctgctgctgc 499 |||||||||||||| ||||||||||||| Sbjct: 175602 ttgccgttgctgctgctgctgctgctgc 175629
>gb|AE003530.3| Drosophila melanogaster chromosome 3L, section 55 of 83 of the complete sequence Length = 279152 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 472 ttgccgttgctgctcctgctgctgctgc 499 |||| ||||||||||||||||||||||| Sbjct: 115972 ttgctgttgctgctcctgctgctgctgc 115945
>gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 of 74 of the complete sequence Length = 308317 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 472 ttgccgttgctgctcctgctgctgctgc 499 |||||||||||||| ||||||||||||| Sbjct: 70135 ttgccgttgctgctgctgctgctgctgc 70162
>emb|AL928893.10| Mouse DNA sequence from clone RP23-55I14 on chromosome 2, complete sequence Length = 235241 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaagaa 551 |||||||||||||||||||||||| Sbjct: 181521 aaggaggaggagaagaaggaagaa 181544
>gb|AC106843.11| Mus musculus chromosome 15, clone RP24-151M4, complete sequence Length = 179117 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 282 atggacaagtttgcttctggtgtttcca 309 ||||||||| |||||||||||||||||| Sbjct: 142519 atggacaagcttgcttctggtgtttcca 142546
>gb|AC164629.14| Mus musculus 10 BAC RP23-16N3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221874 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 472 ttgccgttgctgctcctgctgctgctgc 499 |||| ||||||||||||||||||||||| Sbjct: 88110 ttgctgttgctgctcctgctgctgctgc 88137 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 469 agtttgccgttgctgctcctgctgctgctgc 499 ||||||| ||||||||||||||| ||||||| Sbjct: 85714 agtttgctgttgctgctcctgctcctgctgc 85744 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 472 ttgccgttgctgctcctgctgctgct 497 |||| ||||||||||||||||||||| Sbjct: 86317 ttgctgttgctgctcctgctgctgct 86342 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 472 ttgccgttgctgctcctgctgctgct 497 |||| ||||||||||||||||||||| Sbjct: 85651 ttgctgttgctgctcctgctgctgct 85676 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 tgctgctcctgctgctgctgc 499 ||||||||||||||||||||| Sbjct: 85349 tgctgctcctgctgctgctgc 85369 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 tgctgctcctgctgctgctgc 499 ||||||||||||||||||||| Sbjct: 80144 tgctgctcctgctgctgctgc 80164 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 472 ttgccgttgctgctcctgctgctgctgc 499 |||| |||||||||||| |||||||||| Sbjct: 139194 ttgctgttgctgctccttctgctgctgc 139167
>dbj|AP000485.5| Homo sapiens genomic DNA, chromosome 11, clone:CMB9-21L24, complete sequence Length = 139072 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 472 ttgccgttgctgctcctgctgctgctgc 499 |||||||||||||| ||||||||||||| Sbjct: 8664 ttgccgttgctgctgctgctgctgctgc 8637
>dbj|AP001157.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-658F2, complete sequence Length = 200458 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 472 ttgccgttgctgctcctgctgctgctgc 499 |||||||||||||| ||||||||||||| Sbjct: 154037 ttgccgttgctgctgctgctgctgctgc 154010
>gb|AC114644.10| Mus musculus chromosome 1, clone RP24-128L10, complete sequence Length = 137391 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 528 aaggaggaggagaagaaggaaga 550 ||||||||||||||||||||||| Sbjct: 11086 aaggaggaggagaagaaggaaga 11064
>gb|AC132899.11| Mus musculus chromosome 15, clone RP24-367P22, complete sequence Length = 152183 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 529 aggaggaggagaagaaggaagaa 551 ||||||||||||||||||||||| Sbjct: 57424 aggaggaggagaagaaggaagaa 57446
>gb|AC118688.10| Mus musculus chromosome 5, clone RP23-302F24, complete sequence Length = 176001 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 529 aggaggaggagaagaaggaagaa 551 ||||||||||||||||||||||| Sbjct: 172939 aggaggaggagaagaaggaagaa 172961
>ref|NM_187845.1| Oryza sativa (japonica cultivar-group), Ozsa8289 predicted mRNA Length = 534 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 525 cccaaggaggaggagaagaagga 547 ||||||||||||||||||||||| Sbjct: 220 cccaaggaggaggagaagaagga 242
>ref|XM_467718.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1727 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 443 caaggagtacctcaaggacccga 465 ||||||||||||||||||||||| Sbjct: 1128 caaggagtacctcaaggacccga 1150
>ref|XM_464973.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1080 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 534 gaggagaagaaggaagaacccgaggag 560 |||||||||||||||||| |||||||| Sbjct: 617 gaggagaagaaggaagaagccgaggag 643
>ref|NM_001001883.1| Mus musculus HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 (Hecw2), transcript variant 1, mRNA Length = 4737 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 474 gccgttgctgctcctgctgctgctgcc 500 |||| |||||||||||||||||||||| Sbjct: 2239 gccgctgctgctcctgctgctgctgcc 2265
>gb|AC115846.7| Mus musculus chromosome 1, clone RP24-245O4, complete sequence Length = 170731 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 528 aaggaggaggagaagaaggaaga 550 ||||||||||||||||||||||| Sbjct: 142741 aaggaggaggagaagaaggaaga 142719
>gb|BT018010.1| Zea mays clone EL01N0528A08.c mRNA sequence Length = 654 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 534 gaggagaagaaggaagaacccgaggaggaatcagatggcgagatgggattcagtctgtt 592 ||||||||||||||||| || ||||||| || |||| ||| ||||| ||||| ||||| Sbjct: 325 gaggagaagaaggaagaggccaaggaggagtctgatgacgacatgggcttcagcctgtt 383
>gb|AY330133.1| Pinus contorta clone PCL2146 microsatellite sequence Length = 179 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 473 tgccgttgctgctcctgctgctgctgcctctggtggtgccgccgctgctgc 523 ||||| ||||||| |||||||||||||| ||| || ||| || |||||||| Sbjct: 35 tgccgctgctgctgctgctgctgctgccgctgctgctgctgctgctgctgc 85
>gb|AY023127.1| Oryza sativa microsatellite MRG5452 containing (GCA)X9, closest to marker C402, genomic sequence Length = 227 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 470 gtttgccgttgctgctcctgctgctgctgcctctg 504 |||||| | ||||||| |||||||||||||||||| Sbjct: 130 gtttgctgctgctgctgctgctgctgctgcctctg 96
>gb|AC009462.7| Drosophila melanogaster clone BACR27G04, complete sequence Length = 151609 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 480 gctgctcctgctgctgctgcctctggtggtg 510 ||||||||| |||||||||||||||| |||| Sbjct: 72703 gctgctcctcctgctgctgcctctggcggtg 72673 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 476 cgttgctgctcctgctgctgctgc 499 |||||||||| ||||||||||||| Sbjct: 135678 cgttgctgctgctgctgctgctgc 135655
>gb|AC093197.2| Drosophila melanogaster clone BACR25N15, complete sequence Length = 191907 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 479 tgctgctcctgctgctgctgcct 501 ||||||||||||||||||||||| Sbjct: 168812 tgctgctcctgctgctgctgcct 168834
>gb|AC106169.5| Rattus norvegicus x BAC CH230-105D14 (Children's Hospital Oakland Research Institute) complete sequence Length = 227592 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 529 aggaggaggagaagaaggaagaa 551 ||||||||||||||||||||||| Sbjct: 169328 aggaggaggagaagaaggaagaa 169350
>gb|AY674236.1| Ixodes pacificus clone IP_7_60_92_569_CLU ribosomal protein, large P2 mRNA, complete cds Length = 345 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 526 ccaaggaggaggagaagaaggaagaacccgaggag 560 ||||| ||||||||||||||||||| |||||||| Sbjct: 275 ccaagaaggaggagaagaaggaagagtccgaggag 309
>ref|XM_359730.1| Magnaporthe grisea 70-15 hypothetical protein (MG05047.4) partial mRNA Length = 2649 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 473 tgccgttgctgctcctgctgctgctgc 499 ||||||||||||| ||||||||||||| Sbjct: 1577 tgccgttgctgctgctgctgctgctgc 1551
>ref|XM_423724.1| PREDICTED: Gallus gallus similar to transducin (beta)-like 1 X-linked; transducin (beta)-like 1 (LOC426045), partial mRNA Length = 1307 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 473 tgccgttgctgctcctgctgctgctgc 499 ||||||||||||| ||||||||||||| Sbjct: 512 tgccgttgctgctgctgctgctgctgc 486
>gb|BC026554.1| Mus musculus chromogranin A, mRNA (cDNA clone MGC:36117 IMAGE:4990941), complete cds Length = 1892 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgc 499 ||||||||||||||||||||||| Sbjct: 489 gttgctgctcctgctgctgctgc 467
>gb|BC015806.1| Homo sapiens SH3-domain kinase binding protein 1, mRNA (cDNA clone MGC:9446 IMAGE:3906722), complete cds Length = 2943 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 492 gctgctgcctctggtggtgccgccgctgctgcccc 526 ||||||||||||| || ||| |||||||||||||| Sbjct: 48 gctgctgcctctgctgctgctgccgctgctgcccc 14
>ref|XM_957237.1| Neurospora crassa OR74A hypothetical protein (NCU07688.1) partial mRNA Length = 3447 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgcctctgg 505 ||||||| ||||||||||||||||||| Sbjct: 2603 tgctgctgctgctgctgctgcctctgg 2577
>ref|XM_328393.1| Neurospora crassa OR74A hypothetical protein (NCU07688.1) partial mRNA Length = 3447 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgcctctgg 505 ||||||| ||||||||||||||||||| Sbjct: 2603 tgctgctgctgctgctgctgcctctgg 2577
>gb|DQ440195.1| Aedes aegypti clone AET-173 ribosomal protein P0 mRNA, complete cds Length = 948 Score = 46.1 bits (23), Expect = 0.14 Identities = 52/61 (85%), Gaps = 3/61 (4%) Strand = Plus / Plus Query: 442 tcaaggagtacctcaaggacccgagcaagtt---tgccgttgctgctcctgctgctgctg 498 ||||||||| | |||||||||| |||||||| |||||||||||| || |||||| ||| Sbjct: 794 tcaaggagttcatcaaggacccaagcaagttcgctgccgttgctgccccggctgcttctg 853 Query: 499 c 499 | Sbjct: 854 c 854
>gb|DQ440047.1| Aedes aegypti clone AE-294 60S acidic ribosomal protein P1 mRNA, complete cds Length = 339 Score = 46.1 bits (23), Expect = 0.14 Identities = 55/65 (84%), Gaps = 3/65 (4%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaagaacccgaggaggaatcagatggcgagatgggattcagt 587 ||||| ||| ||||| ||||||||||||||||| || |||| ||| ||||||||| || Sbjct: 271 aaggaagagaagaaggaggaagaacccgaggag---tccgatgacgatatgggattcggt 327 Query: 588 ctgtt 592 ||||| Sbjct: 328 ctgtt 332
>gb|AC147069.2| Pan troglodytes BAC clone RP43-165H20 from 7, complete sequence Length = 193047 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 471 tttgccgttgctgctcctgctgctgct 497 ||||| ||||||||||||||||||||| Sbjct: 6901 tttgctgttgctgctcctgctgctgct 6927
>ref|XM_656186.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3674.2), mRNA Length = 1671 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaaga 550 ||||||||||||||||||||||| Sbjct: 1045 aaggaggaggagaagaaggaaga 1067
>gb|AC150896.6| Mus musculus BAC clone RP23-414N3 from chromosome 1, complete sequence Length = 207503 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 474 gccgttgctgctcctgctgctgctgcc 500 |||| |||||||||||||||||||||| Sbjct: 46098 gccgctgctgctcctgctgctgctgcc 46124
>gb|AY190952.1| Drosophila virilis clone DVIF01_45_G15 (D1418) genomic sequence Length = 39016 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 473 tgccgttgctgctcctgctgctgctgc 499 ||||||||||||| ||||||||||||| Sbjct: 25864 tgccgttgctgctgctgctgctgctgc 25838
>gb|AF039040.1| Caenorhabditis elegans cosmid T22B11, complete sequence Length = 35564 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 529 aggaggaggagaagaaggaagaa 551 ||||||||||||||||||||||| Sbjct: 10342 aggaggaggagaagaaggaagaa 10364
>gb|AC157650.2| Mus musculus BAC clone RP24-573N21 from chromosome 14, complete sequence Length = 186859 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 528 aaggaggaggagaagaaggaaga 550 ||||||||||||||||||||||| Sbjct: 28563 aaggaggaggagaagaaggaaga 28541 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 528 aaggaggaggagaagaaggaaga 550 ||||||||||||||||||||||| Sbjct: 28455 aaggaggaggagaagaaggaaga 28433 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 528 aaggaggaggagaagaaggaaga 550 ||||||||||||||||||||||| Sbjct: 28035 aaggaggaggagaagaaggaaga 28013 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 528 aaggaggaggagaagaaggaaga 550 ||||||||||||||||||||||| Sbjct: 27933 aaggaggaggagaagaaggaaga 27911
>gb|AC121604.3| Mus musculus BAC clone RP23-312E2 from chromosome 8, complete sequence Length = 209383 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 529 aggaggaggagaagaaggaagaa 551 ||||||||||||||||||||||| Sbjct: 25260 aggaggaggagaagaaggaagaa 25238
>ref|XR_002749.1| PREDICTED: Mus musculus similar to THO complex subunit 4 (Tho4) (RNA and export factor binding protein 1) (REF1-I) (Ally of AML-1 and LEF-1) (Aly/REF) (LOC670007), mRNA Length = 2938 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 469 agtttgccgttgctgctcctgctgctgctgc 499 ||||||| ||||||||||||||| ||||||| Sbjct: 2263 agtttgctgttgctgctcctgctcctgctgc 2233 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 472 ttgccgttgctgctcctgctgctgct 497 |||| ||||||||||||||||||||| Sbjct: 2326 ttgctgttgctgctcctgctgctgct 2301 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgc 499 ||||||||||||||||||||| Sbjct: 2628 tgctgctcctgctgctgctgc 2608
>gb|AC131785.3| Mus musculus BAC clone RP24-397D13 from chromosome 17, complete sequence Length = 147557 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 529 aggaggaggagaagaaggaagaa 551 ||||||||||||||||||||||| Sbjct: 86334 aggaggaggagaagaaggaagaa 86312
>gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosome 1, complete sequence Length = 200595 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 529 aggaggaggagaagaaggaagaa 551 ||||||||||||||||||||||| Sbjct: 150230 aggaggaggagaagaaggaagaa 150252
>gb|AC127374.4| Mus musculus BAC clone RP23-46G11 from chromosome 8, complete sequence Length = 180143 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaaga 550 ||||||||||||||||||||||| Sbjct: 138054 aaggaggaggagaagaaggaaga 138076
>gb|AC123558.5| Mus musculus BAC clone RP23-336N16 from chromosome 5, complete sequence Length = 211763 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 529 aggaggaggagaagaaggaagaa 551 ||||||||||||||||||||||| Sbjct: 167168 aggaggaggagaagaaggaagaa 167146
>gb|AC121862.3| Mus musculus BAC clone RP24-110E10 from chromosome 14, complete sequence Length = 178501 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaaga 550 ||||||||||||||||||||||| Sbjct: 16309 aaggaggaggagaagaaggaaga 16331 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaaga 550 ||||||||||||||||||||||| Sbjct: 16207 aaggaggaggagaagaaggaaga 16229 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaaga 550 ||||||||||||||||||||||| Sbjct: 16084 aaggaggaggagaagaaggaaga 16106 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaaga 550 ||||||||||||||||||||||| Sbjct: 15664 aaggaggaggagaagaaggaaga 15686 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaaga 550 ||||||||||||||||||||||| Sbjct: 15556 aaggaggaggagaagaaggaaga 15578
>ref|XM_815870.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508175.20) partial mRNA Length = 6117 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgcctctggtggt 509 ||||||| ||||||||||||||||| ||||| Sbjct: 6062 tgctgctgctgctgctgctgcctctcgtggt 6032
>gb|AC122246.5| Mus musculus BAC clone RP23-152K13 from 1, complete sequence Length = 203739 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 529 aggaggaggagaagaaggaagaa 551 ||||||||||||||||||||||| Sbjct: 16600 aggaggaggagaagaaggaagaa 16622
>gb|AC125344.2| Mus musculus BAC clone RP24-332H21 from 12, complete sequence Length = 179908 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 529 aggaggaggagaagaaggaagaa 551 ||||||||||||||||||||||| Sbjct: 166636 aggaggaggagaagaaggaagaa 166658
>gb|BC050663.2| Homo sapiens SH3-domain kinase binding protein 1, mRNA (cDNA clone IMAGE:4421051), partial cds Length = 1370 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 492 gctgctgcctctggtggtgccgccgctgctgcccc 526 ||||||||||||| || ||| |||||||||||||| Sbjct: 56 gctgctgcctctgctgctgctgccgctgctgcccc 22
>emb|CR637846.2|CNS0ER4S Tetraodon nigroviridis full-length cDNA Length = 516 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaaga 550 ||||||||||||||||||||||| Sbjct: 406 aaggaggaggagaagaaggaaga 428
>emb|AL772197.12| Human DNA sequence from clone RP11-24O6 on chromosome X Contains the 5' end of the SH3KBP1 gene for SH3-domain kinase binding protein 1 (CIN85), two novel genes and one CpG island, complete sequence Length = 106342 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 492 gctgctgcctctggtggtgccgccgctgctgcccc 526 ||||||||||||| || ||| |||||||||||||| Sbjct: 18115 gctgctgcctctgctgctgctgccgctgctgcccc 18149
>emb|AL596188.6| Human DNA sequence from clone CTA-31J9 on chromosome 6 Contains the 5' part of a novel gene, a novel gene and a CpG island, complete sequence Length = 69676 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaaga 550 ||||||||||||||||||||||| Sbjct: 16815 aaggaggaggagaagaaggaaga 16837
>emb|AL157388.12| Human DNA sequence from clone RP11-215A21 on chromosome 10 Contains the 5' end of a novel gene (MGC33215), a ribosomal protein L17 (rpL23) (RPL17) pseudogene and three CpG islands, complete sequence Length = 183382 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 529 aggaggaggagaagaaggaagaa 551 ||||||||||||||||||||||| Sbjct: 173606 aggaggaggagaagaaggaagaa 173628
>gb|AY239227.1| Eimeria maxima TFP250 mRNA, complete cds Length = 7990 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 529 aggaggaggagaagaaggaagaa 551 ||||||||||||||||||||||| Sbjct: 7045 aggaggaggagaagaaggaagaa 7067
>emb|X83546.1|RNLAR2 R.norvegicus mRNA for leucocyte common antigen-related protein (3941 bp) Length = 3941 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 489 gctgctgctgcctctggtggtgccgccgctgctgc 523 |||||||||||| ||| || ||||||||||||||| Sbjct: 2383 gctgctgctgccgctgctgctgccgccgctgctgc 2349
>emb|CR938347.1| Single read from an extremity of a full-length cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAA2YC06AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 631 Score = 46.1 bits (23), Expect = 0.14 Identities = 55/65 (84%), Gaps = 3/65 (4%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaagaacccgaggaggaatcagatggcgagatgggattcagt 587 ||||| ||| ||||| ||||||||||||||||| || |||| ||| ||||||||| || Sbjct: 364 aaggaagagaagaaggaggaagaacccgaggag---tccgatgacgatatgggattcggt 420 Query: 588 ctgtt 592 ||||| Sbjct: 421 ctgtt 425
>emb|CR937955.1| Single read from an extremity of a full-length cDNA clone made from Aedes aegypti total adult females. 3-prime end of clone KW0AAA2YP05BBM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 778 Score = 46.1 bits (23), Expect = 0.14 Identities = 52/61 (85%), Gaps = 3/61 (4%) Strand = Plus / Minus Query: 442 tcaaggagtacctcaaggacccgagcaagtt---tgccgttgctgctcctgctgctgctg 498 ||||||||| | |||||||||| |||||||| |||||||||||| || |||||| ||| Sbjct: 411 tcaaggagttcatcaaggacccaagcaagttcgctgccgttgctgccccggctgcttctg 352 Query: 499 c 499 | Sbjct: 351 c 351
>emb|CR937313.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAB2YG10AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 583 Score = 46.1 bits (23), Expect = 0.14 Identities = 55/65 (84%), Gaps = 3/65 (4%) Strand = Plus / Plus Query: 528 aaggaggaggagaagaaggaagaacccgaggaggaatcagatggcgagatgggattcagt 587 ||||| ||| ||||| ||||||||||||||||| || |||| ||| ||||||||| || Sbjct: 363 aaggaagagaagaaggaggaagaacccgaggag---tccgatgacgatatgggattcggt 419 Query: 588 ctgtt 592 ||||| Sbjct: 420 ctgtt 424
>emb|CR937312.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 3-prime end of clone KW0AAB2YG10BBM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 566 Score = 46.1 bits (23), Expect = 0.14 Identities = 55/65 (84%), Gaps = 3/65 (4%) Strand = Plus / Minus Query: 528 aaggaggaggagaagaaggaagaacccgaggaggaatcagatggcgagatgggattcagt 587 ||||| ||| ||||| ||||||||||||||||| || |||| ||| ||||||||| || Sbjct: 203 aaggaagagaagaaggaggaagaacccgaggag---tccgatgacgatatgggattcggt 147 Query: 588 ctgtt 592 ||||| Sbjct: 146 ctgtt 142
>emb|CR407704.10| Zebrafish DNA sequence from clone CH211-195G8 in linkage group 17, complete sequence Length = 146938 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgcctctggtggtgccgccgctgctgc 523 ||||||||| |||||| ||||||| ||| || ||| ||||||||||| Sbjct: 96110 gttgctgctgctgctgttgctgccgctgctgctgctgccgctgctgc 96064
>gb|AF533773.1| Drosophila melanogaster Wnt4 protein mRNA, complete cds Length = 3202 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgc 499 ||||||||||||||||||||||| Sbjct: 332 gttgctgctcctgctgctgctgc 310
>emb|AL589766.17| Mouse DNA sequence from clone RP23-19G4 on chromosome 13 contains the Vmp gene for vesicular membrane protein P24, complete sequence Length = 176183 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 473 tgccgttgctgctcctgctgctgctgcctctggtggtgccgccgctgctgc 523 ||||| ||||||| ||||||||||||| ||| || ||| ||||||||||| Sbjct: 19228 tgccgctgctgctgctgctgctgctgctgctgctgctgctgccgctgctgc 19178 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgcctctggtggtgccgccgctgctgc 523 ||||||| ||||||||||||| ||| || |||||| |||||||| Sbjct: 19219 tgctgctgctgctgctgctgctgctgctgctgccgctgctgctgc 19175
>gb|AC163649.3| Mus musculus BAC clone RP24-372B10 from chromosome 3, complete sequence Length = 154740 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 529 aggaggaggagaagaaggaagaa 551 ||||||||||||||||||||||| Sbjct: 50603 aggaggaggagaagaaggaagaa 50581
>gb|AF497906.1| Homo sapiens polymerase (DNA directed), gamma (POLG) gene, complete cds Length = 21304 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgcctctggtggtgccgccgctgctgccc 525 ||||||| ||||||||||||| ||| || ||||||||| ||||||| Sbjct: 2569 tgctgctgctgctgctgctgctgctgctgctgccgccgccgctgccc 2523
>gb|AY118546.1| Drosophila melanogaster LD29902 full insert cDNA Length = 3289 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 480 gctgctcctgctgctgctgcctctggtggtg 510 ||||||||| |||||||||||||||| |||| Sbjct: 672 gctgctcctcctgctgctgcctctggcggtg 642
>tpg|BK003806.1| TPA: TPA_inf: Drosophila melanogaster HDC06391 (HDC06391) gene, complete cds Length = 210 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgc 499 ||||||||||||||||||||||| Sbjct: 100 gttgctgctcctgctgctgctgc 78
>gb|AF461331.1| Drosophila bicornuta hunchback (hb) gene, partial cds Length = 501 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgcctctggtggtgc 511 ||||||||| ||||||||||||| |||||||||| Sbjct: 118 gttgctgctgctgctgctgctgctgctggtggtgc 84
>ref|NM_169790.1| Drosophila melanogaster PP2A-B' CG7913-RA, transcript variant A (PP2A-B'), mRNA Length = 3269 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 480 gctgctcctgctgctgctgcctctggtggtg 510 ||||||||| |||||||||||||||| |||| Sbjct: 672 gctgctcctcctgctgctgcctctggcggtg 642
>ref|NM_169789.1| Drosophila melanogaster PP2A-B' CG7913-RB, transcript variant B (PP2A-B'), mRNA Length = 3220 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 480 gctgctcctgctgctgctgcctctggtggtg 510 ||||||||| |||||||||||||||| |||| Sbjct: 672 gctgctcctcctgctgctgcctctggcggtg 642
>gb|AY095078.1| Drosophila melanogaster RE26454 full insert cDNA Length = 2950 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgc 499 ||||||||||||||||||||||| Sbjct: 449 gttgctgctcctgctgctgctgc 427
>gb|AF367094.1| Pinus taeda microsatellite RPTest9 sequence, allele 5 Length = 249 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 473 tgccgttgctgctcctgctgctgctgcctctggtggtgccgccgctgctgc 523 ||||| ||||||| |||||||||||||| ||| || ||| || |||||||| Sbjct: 117 tgccgctgctgctgctgctgctgctgccgctgctgctgctgctgctgctgc 67
>gb|AF367093.1| Pinus taeda microsatellite RPTest9 sequence, allele 4 Length = 240 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 473 tgccgttgctgctcctgctgctgctgcctctggtggtgccgccgctgctgc 523 ||||| ||||||| |||||||||||||| ||| || ||| || |||||||| Sbjct: 108 tgccgctgctgctgctgctgctgctgccgctgctgctgctgctgctgctgc 58
>ref|NM_057624.2| Drosophila melanogaster Wnt oncogene analog 4 CG4698-RA (Wnt4), mRNA Length = 3323 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgc 499 ||||||||||||||||||||||| Sbjct: 450 gttgctgctcctgctgctgctgc 428
>dbj|AK144504.1| Mus musculus 16 days neonate male diencephalon cDNA, RIKEN full-length enriched library, clone:G630083O06 product:chromogranin A, full insert sequence Length = 1877 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgc 499 ||||||||||||||||||||||| Sbjct: 499 gttgctgctcctgctgctgctgc 477
>ref|NM_007693.1| Mus musculus chromogranin A (Chga), mRNA Length = 1892 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgc 499 ||||||||||||||||||||||| Sbjct: 505 gttgctgctcctgctgctgctgc 483
>gb|AF143963.1|AF143963 Pinus taeda microsatellite PtTX2146 sequence Length = 446 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 473 tgccgttgctgctcctgctgctgctgcctctggtggtgccgccgctgctgc 523 ||||| ||||||| |||||||||||||| ||| || ||| || |||||||| Sbjct: 299 tgccgctgctgctgctgctgctgctgccgctgctgctgctgctgctgctgc 349
>gb|AC099016.1| Drosophila melanogaster, chromosome 2R, region 56A-56A, BAC clone BACR27C21, complete sequence Length = 173373 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 477 gttgctgctcctgctgctgctgc 499 ||||||||||||||||||||||| Sbjct: 134094 gttgctgctcctgctgctgctgc 134116
>gb|DQ168588.1| Macaranga indistincta clone Macin8h microsatellite sequence Length = 783 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgcctctggtggtgccgccgctgctgc 523 ||||||||| ||||||||||||| ||| || |||||| |||||||| Sbjct: 358 gttgctgctgctgctgctgctgctgctgttgctgccgctgctgctgc 312
>ref|NM_031892.1| Homo sapiens SH3-domain kinase binding protein 1 (SH3KBP1), transcript variant 1, mRNA Length = 3348 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 492 gctgctgcctctggtggtgccgccgctgctgcccc 526 ||||||||||||| || ||| |||||||||||||| Sbjct: 121 gctgctgcctctgctgctgctgccgctgctgcccc 87
>gb|AC110377.5| Mus musculus BAC clone RP23-460A13 from chromosome 12, complete sequence Length = 196540 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 529 aggaggaggagaagaaggaagaa 551 ||||||||||||||||||||||| Sbjct: 146109 aggaggaggagaagaaggaagaa 146087
>gb|AC156033.6| Mus musculus BAC clone RP23-377G8 from chromosome 12, complete sequence Length = 216718 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 477 gttgctgctcctgctgctgctgc 499 ||||||||||||||||||||||| Sbjct: 121126 gttgctgctcctgctgctgctgc 121148
>gb|DQ066207.1| Ixodes scapularis isolate ISUFL46 ribosomal protein LP2 mRNA, complete cds Length = 345 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 526 ccaaggaggaggagaagaaggaagaacccgaggag 560 ||||| ||||||||||||| |||||| |||||||| Sbjct: 275 ccaagaaggaggagaagaaagaagaatccgaggag 309
>ref|NM_001028223.2| Caenorhabditis elegans T22B11.4b (T22B11.4) mRNA, complete cds Length = 1935 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 529 aggaggaggagaagaaggaagaa 551 ||||||||||||||||||||||| Sbjct: 1035 aggaggaggagaagaaggaagaa 1057
>ref|NM_001028222.2| Caenorhabditis elegans T22B11.4a (T22B11.4) mRNA, complete cds Length = 1958 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 529 aggaggaggagaagaaggaagaa 551 ||||||||||||||||||||||| Sbjct: 1035 aggaggaggagaagaaggaagaa 1057
>emb|BX935206.2| Gallus gallus finished cDNA, clone ChEST866e14 Length = 1013 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 473 tgccgttgctgctcctgctgctgctgc 499 ||||||||||||| ||||||||||||| Sbjct: 547 tgccgttgctgctgctgctgctgctgc 521
>gb|AC008188.4|AC008188 Drosophila melanogaster, chromosome 2R, region 56A2-56B1, BAC clone BACR08I18, complete sequence Length = 160650 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 477 gttgctgctcctgctgctgctgc 499 ||||||||||||||||||||||| Sbjct: 463 gttgctgctcctgctgctgctgc 485
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 470 gtttgccgttgctgctcctgctgctgctgcctctg 504 |||||| | ||||||| |||||||||||||||||| Sbjct: 1611439 gtttgctgctgctgctgctgctgctgctgcctctg 1611473 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 522 gcccccaaggaggaggagaagaaggaagaa 551 |||||||||| |||||||||||||||||| Sbjct: 29011787 gcccccaaggccgaggagaagaaggaagaa 29011758 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgcc 500 ||||||||| |||||||||||||| Sbjct: 3320759 gttgctgctgctgctgctgctgcc 3320736
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 443 caaggagtacctcaaggacccga 465 ||||||||||||||||||||||| Sbjct: 31019529 caaggagtacctcaaggacccga 31019551 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 534 gaggagaagaaggaagaacccgaggag 560 |||||||||||||||||| |||||||| Sbjct: 10714634 gaggagaagaaggaagaagccgaggag 10714608 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 526 ccaaggaggaggagaagaaggaaga 550 ||||| ||||||||||||||||||| Sbjct: 22578591 ccaagaaggaggagaagaaggaaga 22578567 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 529 aggaggaggagaagaaggaag 549 ||||||||||||||||||||| Sbjct: 4617592 aggaggaggagaagaaggaag 4617572 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ctgctgctgctgcctctggt 506 |||||||||||||||||||| Sbjct: 4482391 ctgctgctgctgcctctggt 4482372
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 525 cccaaggaggaggagaagaagga 547 ||||||||||||||||||||||| Sbjct: 8232557 cccaaggaggaggagaagaagga 8232579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 303 gtttccatggttgcctcactg 323 ||||||||||||||||||||| Sbjct: 42649624 gtttccatggttgcctcactg 42649604 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 tgctgctcctgctgctgctgc 499 ||||||||||||||||||||| Sbjct: 8067822 tgctgctcctgctgctgctgc 8067842
>gb|AC009534.9|AC009534 Drosophila melanogaster, chromosome 2L, region 27F-27F, BAC clone BACR01E19, complete sequence Length = 161009 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 477 gttgctgctcctgctgctgctgc 499 ||||||||||||||||||||||| Sbjct: 25085 gttgctgctcctgctgctgctgc 25107
>gb|AC007836.5|AC007836 Drosophila melanogaster, chromosome 2R, region 50F-51C, BAC clone BACR06D02, complete sequence Length = 172791 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgc 499 ||||||||||||||||||||||| Sbjct: 26166 gttgctgctcctgctgctgctgc 26144 Score = 40.1 bits (20), Expect = 8.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 480 gctgctcctgctgctgctgcctctggtggtgccgccgctgctgc 523 |||||| |||||||||| ||| ||| || |||||||||||||| Sbjct: 93218 gctgctgctgctgctgccgccgctgctgccgccgccgctgctgc 93175
>gb|AY826878.1| Heterocapsa triquetra clone HTEFTS1 chloroplast translation factor Ts mRNA, partial cds; nuclear gene for chloroplast product Length = 1657 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 525 cccaaggaggaggagaagaagga 547 ||||||||||||||||||||||| Sbjct: 960 cccaaggaggaggagaagaagga 982
>gb|AF286612.1|AF286612 Pinus taeda clone PtTX2025 microsatellite sequence Length = 446 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 473 tgccgttgctgctcctgctgctgctgcctctggtggtgccgccgctgctgc 523 ||||| ||||||| |||||||||||||| ||| || ||| || |||||||| Sbjct: 299 tgccgctgctgctgctgctgctgctgccgctgctgctgctgctgctgctgc 349
>gb|AC087564.6| Homo sapiens chromosome 16 clone RP11-437L7, complete sequence Length = 157233 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgcctctgg 505 ||||||| ||||||||||||||||||| Sbjct: 98340 tgctgctgctgctgctgctgcctctgg 98314
>ref|XM_576589.1| PREDICTED: Rattus norvegicus Indian hedgehog homolog, (Drosophila) (Ihh), mRNA Length = 1368 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 481 ctgctcctgctgctgctgcctctggtg 507 ||||||||||||||||||| ||||||| Sbjct: 270 ctgctcctgctgctgctgcttctggtg 296
>gb|AC104512.11| Drosophila melanogaster BAC RP98-39C15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172654 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 477 gttgctgctcctgctgctgctgc 499 ||||||||||||||||||||||| Sbjct: 90852 gttgctgctcctgctgctgctgc 90874
>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0434D08 Length = 161266 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 525 cccaaggaggaggagaagaagga 547 ||||||||||||||||||||||| Sbjct: 26488 cccaaggaggaggagaagaagga 26510
>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome Length = 1308759 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 482 tgctcctgctgctgctgcctctg 504 ||||||||||||||||||||||| Sbjct: 265680 tgctcctgctgctgctgcctctg 265702
>gb|AC005703.2|AC005703 Homo sapiens chromosome 17, clone hRPK.849_N_15, complete sequence Length = 233454 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 469 agtttgccgttgctgctcctgctgctgctgc 499 ||||||| ||||||||| ||||||||||||| Sbjct: 174126 agtttgctgttgctgctgctgctgctgctgc 174096
>dbj|AP000559.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0493C11 Length = 143113 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 470 gtttgccgttgctgctcctgctgctgctgcctctg 504 |||||| | ||||||| |||||||||||||||||| Sbjct: 14601 gtttgctgctgctgctgctgctgctgctgcctctg 14635
>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516G10 Length = 148937 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 443 caaggagtacctcaaggacccga 465 ||||||||||||||||||||||| Sbjct: 74485 caaggagtacctcaaggacccga 74507
>dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585G03 Length = 173649 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 443 caaggagtacctcaaggacccga 465 ||||||||||||||||||||||| Sbjct: 8753 caaggagtacctcaaggacccga 8775
>dbj|AP000391.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0538C01 Length = 155643 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 470 gtttgccgttgctgctcctgctgctgctgcctctg 504 |||||| | ||||||| |||||||||||||||||| Sbjct: 140163 gtttgctgctgctgctgctgctgctgctgcctctg 140197
>dbj|AB182244.1| Mus musculus Nedl2 mRNA for ubiquitin-protein ligase NEDL2, complete cds Length = 4737 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 474 gccgttgctgctcctgctgctgctgcc 500 |||| |||||||||||||||||||||| Sbjct: 2239 gccgctgctgctcctgctgctgctgcc 2265
>dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0018M09 Length = 157377 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 534 gaggagaagaaggaagaacccgaggag 560 |||||||||||||||||| |||||||| Sbjct: 132324 gaggagaagaaggaagaagccgaggag 132298
>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_D03 Length = 169378 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 534 gaggagaagaaggaagaacccgaggag 560 |||||||||||||||||| |||||||| Sbjct: 54115 gaggagaagaaggaagaagccgaggag 54089
>dbj|AK129325.1| Mus musculus mRNA for mKIAA1301 protein Length = 6415 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 474 gccgttgctgctcctgctgctgctgcc 500 |||| |||||||||||||||||||||| Sbjct: 1870 gccgctgctgctcctgctgctgctgcc 1896
>gb|AF230904.1|AF230904 Homo sapiens c-Cbl-interacting protein (CIN85) mRNA, complete cds Length = 3348 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 492 gctgctgcctctggtggtgccgccgctgctgcccc 526 ||||||||||||| || ||| |||||||||||||| Sbjct: 121 gctgctgcctctgctgctgctgccgctgctgcccc 87
>dbj|AK071385.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092C13, full insert sequence Length = 1726 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 443 caaggagtacctcaaggacccga 465 ||||||||||||||||||||||| Sbjct: 1127 caaggagtacctcaaggacccga 1149
>dbj|AK058613.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-A12, full insert sequence Length = 1080 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 534 gaggagaagaaggaagaacccgaggag 560 |||||||||||||||||| |||||||| Sbjct: 617 gaggagaagaaggaagaagccgaggag 643
>tpe|BN000560.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx31 gene for class III peroxidase 31 precursor, exon 1 Length = 1353 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 443 caaggagtacctcaaggacccga 465 ||||||||||||||||||||||| Sbjct: 1050 caaggagtacctcaaggacccga 1072
>gb|AE003721.3| Drosophila melanogaster chromosome 3R, section 59 of 118 of the complete sequence Length = 224889 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 480 gctgctcctgctgctgctgcctctggtggtg 510 ||||||||| |||||||||||||||| |||| Sbjct: 13127 gctgctcctcctgctgctgcctctggcggtg 13097 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 476 cgttgctgctcctgctgctgctgc 499 |||||||||| ||||||||||||| Sbjct: 76102 cgttgctgctgctgctgctgctgc 76079
>gb|AE003665.4| Drosophila melanogaster chromosome 2L, section 74 of 83 of the complete sequence Length = 157875 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 479 tgctgctcctgctgctgctgcct 501 ||||||||||||||||||||||| Sbjct: 147693 tgctgctcctgctgctgctgcct 147671
>gb|AE003616.2| Drosophila melanogaster chromosome 2L, section 25 of 83 of the complete sequence Length = 267997 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 477 gttgctgctcctgctgctgctgc 499 ||||||||||||||||||||||| Sbjct: 249384 gttgctgctcctgctgctgctgc 249406
>gb|AE003814.3| Drosophila melanogaster chromosome 2R, section 36 of 73 of the complete sequence Length = 254438 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgc 499 ||||||||||||||||||||||| Sbjct: 62022 gttgctgctcctgctgctgctgc 62000 Score = 40.1 bits (20), Expect = 8.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 480 gctgctcctgctgctgctgcctctggtggtgccgccgctgctgc 523 |||||| |||||||||| ||| ||| || |||||||||||||| Sbjct: 129074 gctgctgctgctgctgccgccgctgctgccgccgccgctgctgc 129031
>gb|AE003797.3| Drosophila melanogaster chromosome 2R, section 53 of 73 of the complete sequence Length = 306854 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 477 gttgctgctcctgctgctgctgc 499 ||||||||||||||||||||||| Sbjct: 32753 gttgctgctcctgctgctgctgc 32775
>gb|AE003442.3| Drosophila melanogaster chromosome X, section 26 of 74 of the complete sequence Length = 316794 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 477 gttgctgctcctgctgctgctgc 499 ||||||||||||||||||||||| Sbjct: 52820 gttgctgctcctgctgctgctgc 52798 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 472 ttgccgttgctgctcctgctgctgctgc 499 |||| ||||||||| ||||||||||||| Sbjct: 243589 ttgctgttgctgctgctgctgctgctgc 243616
>gb|AC117614.12| Mus musculus chromosome 5, clone RP23-110C17, complete sequence Length = 222809 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 529 aggaggaggagaagaaggaagaa 551 ||||||||||||||||||||||| Sbjct: 125928 aggaggaggagaagaaggaagaa 125950
>gb|AC006215.1|AC006215 Drosophila melanogaster, chromosome 2L, region 38C1-38C2, P1 clones DS01096 and DS00956, complete sequence Length = 106735 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 479 tgctgctcctgctgctgctgcct 501 ||||||||||||||||||||||| Sbjct: 81955 tgctgctcctgctgctgctgcct 81977
>gb|AC005316.1|AC005316 Human Chromosome 15q26.1 PAC clone pDJ10k5 containing human DNA polymerase gamma (polg) gene, complete sequence Length = 117270 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 479 tgctgctcctgctgctgctgcctctggtggtgccgccgctgctgccc 525 ||||||| ||||||||||||| ||| || ||||||||| ||||||| Sbjct: 27644 tgctgctgctgctgctgctgctgctgctgctgccgccgccgctgccc 27690 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,125,509 Number of Sequences: 3902068 Number of extensions: 7125509 Number of successful extensions: 359940 Number of sequences better than 10.0: 3907 Number of HSP's better than 10.0 without gapping: 3924 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 328162 Number of HSP's gapped (non-prelim): 28855 length of query: 626 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 603 effective length of database: 17,143,297,704 effective search space: 10337408515512 effective search space used: 10337408515512 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
