ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags36p19 |
|---|---|
| Clone Library Name | barley_pub |
>PFPB_RICCO (Q41141) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase| beta subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate-dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) Length = 552 Score = 331 bits (849), Expect = 8e-91 Identities = 161/193 (83%), Positives = 172/193 (89%) Frame = +1 Query: 16 IYSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNVALIGEEVAEKKETLK 195 IYSEMIGNVM DARSTGKYYHFVRLMGRAASHITLECALQTHPN+ +IGEEVA KK LK Sbjct: 234 IYSEMIGNVMIDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKLALK 293 Query: 196 NVTDYITDVVCKRAELGYNYGVVLIPEGLIDFIPEIQKLIAELNEILAHDVVDEAGAWKS 375 +VTDYI DV+CKRA+LGYNYGV+LIPEGLIDFIPE+Q LIAELNEILAHDVVDE G WK Sbjct: 294 DVTDYIVDVICKRADLGYNYGVILIPEGLIDFIPEVQNLIAELNEILAHDVVDEGGLWKK 353 Query: 376 KLEPASRQLFDFLPKTIQEQLLLERDPHGNVQVAKIETEKMLIAMVETELEKRRAAGKYS 555 KL S QLF+FLP IQEQL+LERDPHGNVQVAKIETEKMLI MVETELEKR+ G Y Sbjct: 354 KLTSQSLQLFEFLPVAIQEQLMLERDPHGNVQVAKIETEKMLIQMVETELEKRKQQGTYK 413 Query: 556 AHFRGQSHFFGYE 594 AHF+GQSHFFGYE Sbjct: 414 AHFKGQSHFFGYE 426
>PFPB_SOLTU (P21343) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase| beta subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) Length = 552 Score = 325 bits (833), Expect = 6e-89 Identities = 160/193 (82%), Positives = 171/193 (88%) Frame = +1 Query: 16 IYSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNVALIGEEVAEKKETLK 195 IY+EMIGNVM DARSTGKYYHFVRLMGRAASHITLECALQTHPNV LIGEEV KK TLK Sbjct: 234 IYAEMIGNVMIDARSTGKYYHFVRLMGRAASHITLECALQTHPNVTLIGEEVFAKKLTLK 293 Query: 196 NVTDYITDVVCKRAELGYNYGVVLIPEGLIDFIPEIQKLIAELNEILAHDVVDEAGAWKS 375 NVTDYI DVVCKRAE GYNYGV+LIPEGLIDFIPE+Q+LIAELNEILAHDVVDEAG WK Sbjct: 294 NVTDYIADVVCKRAESGYNYGVILIPEGLIDFIPEVQQLIAELNEILAHDVVDEAGVWKK 353 Query: 376 KLEPASRQLFDFLPKTIQEQLLLERDPHGNVQVAKIETEKMLIAMVETELEKRRAAGKYS 555 KL P +LF+ LP IQEQLLLERDPHGNVQVAKIETEKMLI MVETEL++R+ G Y+ Sbjct: 354 KLTPQCLELFELLPLAIQEQLLLERDPHGNVQVAKIETEKMLIQMVETELDQRKQKGAYN 413 Query: 556 AHFRGQSHFFGYE 594 A F+GQ HFFGYE Sbjct: 414 AQFKGQFHFFGYE 426
>PFPA_SOLTU (P21342) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase| alpha subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate-dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) Length = 616 Score = 177 bits (449), Expect = 2e-44 Identities = 91/197 (46%), Positives = 130/197 (65%), Gaps = 1/197 (0%) Frame = +1 Query: 7 LAXIYSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNVALIGEEVAEKKE 186 + + S++I NV TDA S KYY+F+RLMGR ASH+ L+C LQ+HPN+ ++GEEVA K Sbjct: 237 ICKVNSQLISNVCTDALSAEKYYYFIRLMGRKASHVALDCTLQSHPNMVILGEEVAASKL 296 Query: 187 TLKNVTDYITDVVCKRAELGYNYGVVLIPEGLIDFIPEIQKLIAELNEILAHDVVDEAGA 366 T+ ++T I D V RAE N+GV+L+PEGLI+ IPE+ L+ E++ +L V A Sbjct: 297 TIFDITQQICDAVQARAEHDKNHGVILLPEGLIESIPEVYSLLQEIHGLLRQGV--SADK 354 Query: 367 WKSKLEPASRQLFDFLPKTIQEQLLLERDPHGNVQVAKIETEKMLIAMVETELEKRRAAG 546 S+L P + LF+FLP I++QLLL + + Q+++IETEK++ +VETE+ KR G Sbjct: 355 ISSQLSPWASALFEFLPHFIRKQLLLHPESDDSAQLSQIETEKLIAHLVETEMNKRLKEG 414 Query: 547 KYSA-HFRGQSHFFGYE 594 Y F HFFGY+ Sbjct: 415 TYKGKKFNAICHFFGYQ 431
>PFPA_RICCO (Q41140) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase| alpha subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) Length = 617 Score = 171 bits (432), Expect = 2e-42 Identities = 90/197 (45%), Positives = 127/197 (64%), Gaps = 1/197 (0%) Frame = +1 Query: 7 LAXIYSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNVALIGEEVAEKKE 186 + + S++I NV TDA S KYY+F+RLMGR ASH+ LEC LQ+HPN+ ++GEEVA K Sbjct: 237 ICKVNSQLISNVCTDALSAEKYYYFIRLMGRKASHVALECTLQSHPNMVILGEEVAASKL 296 Query: 187 TLKNVTDYITDVVCKRAELGYNYGVVLIPEGLIDFIPEIQKLIAELNEILAHDVVDEAGA 366 TL ++T + D V RAE +GV+L+PEGLI+ IPE+ L+ E++ +L V Sbjct: 297 TLFDLTKQVCDAVQARAEQDKYHGVILLPEGLIESIPEVYALLKEIHGLLRQGV--SPNN 354 Query: 367 WKSKLEPASRQLFDFLPKTIQEQLLLERDPHGNVQVAKIETEKMLIAMVETELEKRRAAG 546 S+L P + LF+FLP I++QLLL + + Q+++IETEK+L +VE E+ KR G Sbjct: 355 ISSQLSPWASALFEFLPPFIKKQLLLYPESDDSAQLSQIETEKLLAHLVEAEMNKRLKEG 414 Query: 547 KYSA-HFRGQSHFFGYE 594 Y F HFFGY+ Sbjct: 415 TYKGKKFNAICHFFGYQ 431
>ZAN_MOUSE (O88799) Zonadhesin precursor| Length = 5376 Score = 37.0 bits (84), Expect = 0.043 Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 8/63 (12%) Frame = +3 Query: 39 CHD*CTVNRQILPLCEAYG-----SCCFSHYTRVCSTDTP*CC---THR*RGC*EEGNTQ 194 C CT Q + LCE YG SC +++TR C D+P C H C E+G T Sbjct: 5223 CSQHCTCASQGILLCEPYGCRAGESCMVANFTRGCFQDSP-CLQNPCHNDGRCEEQGATF 5281 Query: 195 ECH 203 CH Sbjct: 5282 ICH 5284
>MTCD_TETTH (Q8WSW3) Cadmium metallothionein precursor (MT-Cd) (Cd-MT)| Length = 162 Score = 34.3 bits (77), Expect = 0.28 Identities = 19/58 (32%), Positives = 24/58 (41%) Frame = +3 Query: 51 CTVNRQILPLCEAYGSCCFSHYTRVCSTDTP*CCTHR*RGC*EEGNTQECHRLHYRCC 224 C VN + G CC S C +DT CCT GC + + Q C + CC Sbjct: 65 CGVNAKPCCFDPNSGCCCVSKTNNCCKSDTKECCTGTGEGC-KCTSCQCCKPVQQGCC 121 Score = 31.6 bits (70), Expect = 1.8 Identities = 17/58 (29%), Positives = 23/58 (39%) Frame = +3 Query: 51 CTVNRQILPLCEAYGSCCFSHYTRVCSTDTP*CCTHR*RGC*EEGNTQECHRLHYRCC 224 C VN + G CC S C +DT CCT G + C ++ +CC Sbjct: 9 CGVNAKPCCTDPNSGCCCVSKTDNCCKSDTKECCT---------GTGEGCKCVNCKCC 57
>YDB4_SCHPO (Q10357) Hypothetical protein C22E12.04 in chromosome I| Length = 297 Score = 33.9 bits (76), Expect = 0.37 Identities = 14/43 (32%), Positives = 18/43 (41%) Frame = +3 Query: 96 SCCFSHYTRVCSTDTP*CCTHR*RGC*EEGNTQECHRLHYRCC 224 SCC CS+ P CC+ +GC T C + CC Sbjct: 238 SCCSQEKKSCCSSKKPSCCSQEKKGCCSTEKTSCCSQEKKSCC 280
>MUTS_BACCR (Q81A25) DNA mismatch repair protein mutS| Length = 884 Score = 32.3 bits (72), Expect = 1.1 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 14/104 (13%) Frame = +1 Query: 136 THPNVALIGEEVAEKKETLKNVTDYITDVVCKR-----------AELGYNYGVVLIPEGL 282 T N+A + E E+K+TL N +ITD + ++ +L Y+ L E Sbjct: 463 TKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQLEYDLFTALREEVK 522 Query: 283 IDFIPEIQ---KLIAELNEILAHDVVDEAGAWKSKLEPASRQLF 405 + FIP++Q K+I+EL+ + + V E + + R++F Sbjct: 523 V-FIPKLQHLAKVISELDVLQSFATVSEEEQFVKLVLTTKREIF 565
>MUTS_GEOKA (Q5L0E5) DNA mismatch repair protein mutS| Length = 896 Score = 31.6 bits (70), Expect = 1.8 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 14/88 (15%) Frame = +1 Query: 136 THPNVALIGEEVAEKKETLKNVTDYIT-----------DVVCKRAELGYNYGVVLIPEGL 282 T PN+ L+ E E+K+TL N +IT + K EL Y V I E + Sbjct: 461 TKPNLPLVPEGRYERKQTLANAERFITPELKEKEALILEAEEKSIELEYEL-FVAIREQV 519 Query: 283 IDFIPEIQ---KLIAELNEILAHDVVDE 357 +IP +Q K IAEL+ + + + + Sbjct: 520 KQYIPRLQTLAKAIAELDVLQSFATISD 547
>TFB3_YARLI (Q6C7D0) RNA polymerase II transcription factor B subunit 3 (RNA| polymerase II transcription factor B p38 subunit) (RNA polymerase II transcription factor B 38 kDa subunit) Length = 346 Score = 31.2 bits (69), Expect = 2.4 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Frame = +1 Query: 328 EILAHDVVDEAGAWKSKLEPAS--RQLFDFLPKTIQEQLLLERDPHGNVQVAKIETEKML 501 E LAHD+ +AG + K A +Q F L +Q +LL E + + N ++TE+ Sbjct: 271 EPLAHDIQHQAGGFTLKAAYARILQQAFFGLGVDVQTELLAEENGNSNGTAVPVKTEEDP 330 Query: 502 IAMVETELE 528 + + E ++ Sbjct: 331 VKLEEPSIQ 339
>MUTS_BACHK (Q6HF46) DNA mismatch repair protein mutS| Length = 890 Score = 31.2 bits (69), Expect = 2.4 Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 14/104 (13%) Frame = +1 Query: 136 THPNVALIGEEVAEKKETLKNVTDYITDVVCKR-----------AELGYNYGVVLIPEGL 282 T N+ + E E+K+TL N +ITD + ++ +L Y+ L E Sbjct: 469 TKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQLEYDLFTALREEVK 528 Query: 283 IDFIPEIQ---KLIAELNEILAHDVVDEAGAWKSKLEPASRQLF 405 + FIP++Q K+I+EL+ + + V E + + R++F Sbjct: 529 V-FIPKLQHLAKVISELDVLQSFATVSEEEQFVKPVLTTKREIF 571
>MUTS_BACC1 (P61665) DNA mismatch repair protein mutS| Length = 892 Score = 31.2 bits (69), Expect = 2.4 Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 14/104 (13%) Frame = +1 Query: 136 THPNVALIGEEVAEKKETLKNVTDYITDVVCKR-----------AELGYNYGVVLIPEGL 282 T N+ + E E+K+TL N +ITD + ++ +L Y+ L E Sbjct: 469 TKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQLEYDLFTALREEVK 528 Query: 283 IDFIPEIQ---KLIAELNEILAHDVVDEAGAWKSKLEPASRQLF 405 + FIP++Q K+I+EL+ + + V E + + R++F Sbjct: 529 V-FIPKLQHLAKVISELDVLQSFATVSEEEQFVKPVLTTKREIF 571
>MUTS_BACAN (Q81WR3) DNA mismatch repair protein mutS| Length = 892 Score = 31.2 bits (69), Expect = 2.4 Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 14/104 (13%) Frame = +1 Query: 136 THPNVALIGEEVAEKKETLKNVTDYITDVVCKR-----------AELGYNYGVVLIPEGL 282 T N+ + E E+K+TL N +ITD + ++ +L Y+ L E Sbjct: 469 TKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQLEYDLFTALREEVK 528 Query: 283 IDFIPEIQ---KLIAELNEILAHDVVDEAGAWKSKLEPASRQLF 405 + FIP++Q K+I+EL+ + + V E + + R++F Sbjct: 529 V-FIPKLQHLAKVISELDVLQSFATVSEEEQFVKPVLTTKREIF 571
>MUTS_BACCZ (Q636Q7) DNA mismatch repair protein mutS| Length = 894 Score = 31.2 bits (69), Expect = 2.4 Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 14/104 (13%) Frame = +1 Query: 136 THPNVALIGEEVAEKKETLKNVTDYITDVVCKR-----------AELGYNYGVVLIPEGL 282 T N+ + E E+K+TL N +ITD + ++ +L Y+ L E Sbjct: 469 TKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQLEYDLFTALREEVK 528 Query: 283 IDFIPEIQ---KLIAELNEILAHDVVDEAGAWKSKLEPASRQLF 405 + FIP++Q K+I+EL+ + + V E + + R++F Sbjct: 529 V-FIPKLQHLAKVISELDVLQSFATVSEEEQFVKPVLTTKREIF 571
>MUTS_LISIN (Q92BV3) DNA mismatch repair protein mutS| Length = 860 Score = 30.4 bits (67), Expect = 4.0 Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 11/77 (14%) Frame = +1 Query: 136 THPNVALIGEEVAEKKETLKNVTDYIT-----------DVVCKRAELGYNYGVVLIPEGL 282 T N L+ E E+K+TL N YIT D K EL Y + E + Sbjct: 469 TRANTHLLPEGRYERKQTLANAERYITPELKEKEKLILDAEEKSMELEYQL-FTEVREMV 527 Query: 283 IDFIPEIQKLIAELNEI 333 D+I +QKL ++EI Sbjct: 528 KDYIERLQKLAKSVSEI 544
>MT1_TETTH (Q8T6B3) Metallothionein-1 (MT-1)| Length = 107 Score = 30.0 bits (66), Expect = 5.3 Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 2/60 (3%) Frame = +3 Query: 51 CTVNRQILPLCEA--YGSCCFSHYTRVCSTDTP*CCTHR*RGC*EEGNTQECHRLHYRCC 224 C P C G CC S C +D CCT GC G + C CC Sbjct: 8 CCCGENAKPCCTDPNSGCCCVSETNNCCKSDKKECCTGTGEGCKWTG-CKCCQPAKSGCC 66
>GCSH1_SULTO (Q972C3) Probable glycine cleavage system H protein 1| Length = 139 Score = 29.6 bits (65), Expect = 6.9 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 3/91 (3%) Frame = +1 Query: 292 IPEIQKLIAELNEILAHD---VVDEAGAWKSKLEPASRQLFDFLPKTIQEQLLLERDPHG 462 +PEI K E+ A+D VV+ A P S ++ + K + L+ +DP+G Sbjct: 52 LPEIDK------EVKANDPVAVVESVKAAADIYSPLSGKVIETNQKLTESPELINKDPYG 105 Query: 463 NVQVAKIETEKMLIAMVETELEKRRAAGKYS 555 + K+E E+EK + KYS Sbjct: 106 EGWIFKLEISD------RNEIEKLLSPEKYS 130
>RPOA2_THEVO (Q979F5) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| Length = 508 Score = 29.6 bits (65), Expect = 6.9 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = +1 Query: 166 EVAEKKETLKNVTDYITDVVCKRAELGYNYGVVLIPEGLIDFI 294 E+ EK E K V+ + DV+ + +LGYN IPE + + I Sbjct: 112 EIREKYEYEKKVSSQVLDVIAEAKKLGYN-----IPESVAEEI 149
>K6PF1_ANASP (Q8YKG3) 6-phosphofructokinase 1 (EC 2.7.1.11) (Phosphofructokinase| 1) (Phosphohexokinase 1) Length = 359 Score = 29.6 bits (65), Expect = 6.9 Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 12/107 (11%) Frame = +1 Query: 82 VRLMGRAASHITLECALQTHPNVALIGEEVAEKKETLKNVTDYITDVVC----KRAELGY 249 + +MGR A HI L + +V LI E + Y D +C R E G Sbjct: 180 LEVMGRDAGHIALAAGIAGGADVILIPEIL------------YSMDDICYHIKHRQEEGK 227 Query: 250 NYGVVLIPEGLIDFIPEI--------QKLIAELNEILAHDVVDEAGA 366 NY ++++ E + EI Q + E LA + D GA Sbjct: 228 NYCLIIVSEAVRTQDGEILTLTNRLGQSRYGGIGEYLADQISDRIGA 274
>MUTS_LISMO (Q8Y789) DNA mismatch repair protein mutS| Length = 860 Score = 29.6 bits (65), Expect = 6.9 Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 11/77 (14%) Frame = +1 Query: 136 THPNVALIGEEVAEKKETLKNVTDYIT-----------DVVCKRAELGYNYGVVLIPEGL 282 T N L+ E E+K+TL N YIT D K EL Y + E + Sbjct: 469 TRANTHLLPEGRYERKQTLTNAERYITPELKEKEKLILDAEEKSMELEYQL-FSEVREMV 527 Query: 283 IDFIPEIQKLIAELNEI 333 D+I +QKL ++EI Sbjct: 528 KDYIERLQKLAKSVSEI 544
>MUTS_LISMF (Q71ZR7) DNA mismatch repair protein mutS| Length = 860 Score = 29.6 bits (65), Expect = 6.9 Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 11/77 (14%) Frame = +1 Query: 136 THPNVALIGEEVAEKKETLKNVTDYIT-----------DVVCKRAELGYNYGVVLIPEGL 282 T N L+ E E+K+TL N YIT D K EL Y + E + Sbjct: 469 TRANTHLLPEGRYERKQTLTNAERYITPELKEKEKLILDAEEKSMELEYQL-FSEVREMV 527 Query: 283 IDFIPEIQKLIAELNEI 333 D+I +QKL ++EI Sbjct: 528 KDYIERLQKLAKSVSEI 544
>EFG_BACTN (Q8A474) Elongation factor G (EF-G)| Length = 705 Score = 29.6 bits (65), Expect = 6.9 Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 22/115 (19%) Frame = +1 Query: 205 DYITDVVCKRAELGYNYGVVLIP-------EGLIDFIP--------EIQKLIAELNEILA 339 D+ V +A LG N +++P +GL+D I E + EI A Sbjct: 146 DFFEVVRQMKAVLGANPCPIVVPIGAEETFKGLVDLIKMKAIYWHDETMGADYTVEEIPA 205 Query: 340 HDVVDEAGAWKSKLEPASRQLFDFL-------PKTIQEQLLLERDPHGNVQVAKI 483 D+VDEA W+ K+ + D L P TI E+ +L + VQ+A + Sbjct: 206 -DLVDEANEWRDKMLEKVAEFDDALMEKYFDDPSTITEEEVLRALRNATVQMAVV 259
>CL190_DROME (Q9VJE5) Restin homolog (Cytoplasmic linker protein 190)| (Microtubule-binding protein 190) (d-CLIP-190) Length = 1690 Score = 29.6 bits (65), Expect = 6.9 Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 1/158 (0%) Frame = +1 Query: 106 SHITLECALQTHPNVALIGEEVAEKKETLKNVTDYITDVVCKRAELGYNYGVVLIPEGLI 285 S+ LE ++H + E+ +K+ TL+ T + + + + + L + L+ Sbjct: 1404 SNTVLESQKKSHNEIQDKLEQAQQKERTLQEETSKLAEQLSQLKQANEELQKSLQQKQLL 1463 Query: 286 -DFIPEIQKLIAELNEILAHDVVDEAGAWKSKLEPASRQLFDFLPKTIQEQLLLERDPHG 462 + E +AE +++ D +D+A + KS L + L + E R + Sbjct: 1464 LEKGNEFDTQLAEYQKVI--DEMDDAASVKSAL-------LEQLQNRVAELETALRQAND 1514 Query: 463 NVQVAKIETEKMLIAMVETELEKRRAAGKYSAHFRGQS 576 + A +ET+++ + ELEK R A G S Sbjct: 1515 AQKTAYLETKELRRQLESLELEKSREVLSLKAQMNGAS 1552
>MT1_TETPY (O97388) Metallothionein-1 precursor (MT-1) [Contains:| Metallothionein-2 (MT-2)] Length = 107 Score = 29.6 bits (65), Expect = 6.9 Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 2/43 (4%) Frame = +3 Query: 51 CTVNRQILPLCEA--YGSCCFSHYTRVCSTDTP*CCTHR*RGC 173 C P C G CC S C +D CCT GC Sbjct: 8 CCCGENAKPCCTDPNSGCCCVSETNNCCKSDKKECCTGTGEGC 50
>MT1_TETPI (P80394) Metallothionein-1 precursor (MT-1) [Contains:| Metallothionein-2 (MT-2)] Length = 107 Score = 29.6 bits (65), Expect = 6.9 Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 2/43 (4%) Frame = +3 Query: 51 CTVNRQILPLCEA--YGSCCFSHYTRVCSTDTP*CCTHR*RGC 173 C P C G CC S C +D CCT GC Sbjct: 8 CCCGENAKPCCTDPNSGCCCVSETNNCCKSDKKECCTGTGEGC 50
>DEGZ_CAEEL (Q10025) Degenerin-like protein T28D9.7 in chromosome II| Length = 982 Score = 29.3 bits (64), Expect = 9.0 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 2/81 (2%) Frame = +1 Query: 229 KRAELGYNYGVVLIPEGLIDFIPEIQKLIAELNEILAHDVVDEAGAWKSKLEPASRQLFD 408 +R G ++ +G D + +KLI E++E + + EAG S + + R+L Sbjct: 624 QRGSAGKTGAIMFFGDGNKDNRQKFEKLIVEMHECASGKMRKEAGKMLSSFKKSYRELQA 683 Query: 409 FLPKTIQEQL--LLERDPHGN 465 K +E+L LE GN Sbjct: 684 AYGKLFKEELPDYLENFQFGN 704
>COAT_SBMV (P03607) Coat protein precursor (Capsid protein)| Length = 279 Score = 29.3 bits (64), Expect = 9.0 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = +1 Query: 148 VALIGEEVAEKKETLKNVTDYITDVVCKRAELGYNYGVVLIPEGLI 285 +AL EV+EK+ K TDY T V + N G +L+P L+ Sbjct: 204 IALDTNEVSEKRYPFKTATDYATAV-----GVNANIGNILVPARLV 244
>UBP25_HUMAN (Q9UHP3) Ubiquitin carboxyl-terminal hydrolase 25 (EC 3.1.2.15)| (Ubiquitin thioesterase 25) (Ubiquitin-specific-processing protease 25) (Deubiquitinating enzyme 25) (USP on chromosome 21) Length = 1087 Score = 29.3 bits (64), Expect = 9.0 Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 5/88 (5%) Frame = +1 Query: 178 KKETLKNVTDYITDVVCKRAELGYNYGVVLIPEGLIDFIPEIQKLIAELNEILAHDVVDE 357 ++E L + + ++ + N G++++ E ++ F+P + L+ E+ E V D Sbjct: 960 RRECLLKLNEQAAELFESGEDREVNNGLIIMNEFIVPFLPLL--LVDEMEEKDILAVEDM 1017 Query: 358 AGAWKS----KLEP-ASRQLFDFLPKTI 426 W S ++EP +L DFLPK + Sbjct: 1018 RNRWCSYLGQEMEPHLQEKLTDFLPKLL 1045
>EFG_BACFR (Q64NK6) Elongation factor G (EF-G)| Length = 705 Score = 29.3 bits (64), Expect = 9.0 Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 23/116 (19%) Frame = +1 Query: 205 DYITDVVCKRAELGYNYGVVLIP-------EGLIDFIPEIQKLIAELNEILAHD------ 345 D+ V +A LG N V+IP +GL+D I K I +E + D Sbjct: 146 DFFEVVRQMKAVLGANPCPVVIPIGAEENFKGLVDLIK--MKAIYWHDETMGADYTIEEI 203 Query: 346 ---VVDEAGAWKSKLEPASRQLFDFL-------PKTIQEQLLLERDPHGNVQVAKI 483 +VDEA W+ K+ + D L P TI E+ +L + VQ+A + Sbjct: 204 PANLVDEANEWRDKMLEKVAEFDDALMEKYFDDPSTITEEEVLRALRNATVQMAVV 259
>EFG_BACFN (Q5L8A7) Elongation factor G (EF-G)| Length = 705 Score = 29.3 bits (64), Expect = 9.0 Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 23/116 (19%) Frame = +1 Query: 205 DYITDVVCKRAELGYNYGVVLIP-------EGLIDFIPEIQKLIAELNEILAHD------ 345 D+ V +A LG N V+IP +GL+D I K I +E + D Sbjct: 146 DFFEVVRQMKAVLGANPCPVVIPIGAEENFKGLVDLIK--MKAIYWHDETMGADYTIEEI 203 Query: 346 ---VVDEAGAWKSKLEPASRQLFDFL-------PKTIQEQLLLERDPHGNVQVAKI 483 +VDEA W+ K+ + D L P TI E+ +L + VQ+A + Sbjct: 204 PANLVDEANEWRDKMLEKVAEFDDALMEKYFDDPSTITEEEVLRALRNATVQMAVV 259
>7LESS_DROVI (P20806) Protein sevenless (EC 2.7.10.1)| Length = 2594 Score = 29.3 bits (64), Expect = 9.0 Identities = 14/42 (33%), Positives = 26/42 (61%) Frame = -2 Query: 552 VLPRRSSLLQFSFNHGNKHFLSFNFRNLNIAMWISFKQKLLL 427 +LP+ + LL+ S++ G+KH L+ + + W S + +LLL Sbjct: 754 LLPQENQLLELSYDGGHKHALALSNDSWRGFAWSSDQAQLLL 795 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,532,481 Number of Sequences: 219361 Number of extensions: 1594143 Number of successful extensions: 5619 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 5372 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5608 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
