>SPBP_RAT (P08723) Prostatic spermine-binding protein precursor (SBP)|
          Length = 279

 Score = 32.7 bits (73), Expect = 0.96
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +1

Query: 535 GREDDGGSLDDGAPSDAGSWETXDDNEMDLPDDPANDD 648
           G +DD    DD    D GS +  DD + D  DD  +DD
Sbjct: 235 GDDDDNDDEDDDKDDDGGSGDDGDDGDDDEDDDGGDDD 272

>DP2L_METTH (O27579) DNA polymerase II large subunit (EC 2.7.7.7) (Pol II)|
          Length = 1092

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +1

Query: 118 DRTVSVSWFRSSLHSQEPRVIECTEVVSAYELDGHPDYDYCYGDVVVR 261
           D  +++S++R+  +  E    +   +   Y++  HP Y Y Y DV VR
Sbjct: 438 DDPLNLSYYRTRWNELEVSAGDAFRISEEYDVPLHPRYTYFYHDVTVR 485

>SODCP_LYCES (P14831) Superoxide dismutase [Cu-Zn], chloroplast precursor (EC|
           1.15.1.1)
          Length = 217

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
 Frame = +1

Query: 421 VTHLSWVGNIVGFQDGEIEVTWGDGSVSKVGPHEIYVVGR-------EDDGG 555
           + H   +GNIV   DG  EVT  D  +   GP+   VVGR       EDD G
Sbjct: 141 IRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNS--VVGRALVVHELEDDLG 190

>NO29_XENLA (O42584) Nucleoplasmin-like protein NO29 (NOVA)|
          Length = 183

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = +1

Query: 451 VGFQDGEIEVTW----GDGSVSKVGPHEIYVVGREDDGGSLDDGAPSDAGSWETXDDNEM 618
           VG+ + E  VT+    G G V   G H  YVV  +D+  S  +    D    E  DD++ 
Sbjct: 95  VGYFEIEAPVTFRLTSGSGPVFISGRH--YVVASDDEDLSGSEEEMEDEEEEEDDDDDDD 152

Query: 619 DLPDDPANDD 648
           D  DD  +DD
Sbjct: 153 DDDDDDDDDD 162

>HRB3_XANCV (P80152) Protein hrpB3 precursor|
          Length = 253

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +3

Query: 219 PPGXXXXXWRCRCSLAICFTSYGIIQWWKHHGAGQ 323
           PP      W   C+LA+C      + WW +  AG+
Sbjct: 203 PPRPSPWPWLAGCALALCLAGAAALYWWPNPQAGR 237

>RGP2_CAEEL (P34342) Ran GTPase-activating protein 2 (Ran nuclear|
           import/export-related protein 2) (RanGAP)
          Length = 960

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = +1

Query: 481 TWGD--GSVSKVGPHEIYVVGREDDGGSLDDGAPSDAGSWETXDDNEMDLPDDPANDD 648
           ++GD    V+ + P  + V   +DD GSL DG   +  S ++ D  + DL DD  +DD
Sbjct: 764 SFGDEFSDVAGMAPENVNVGDEDDDLGSL-DGDQEEYNS-KSSDSEDADLDDDDEDDD 819

>G3P_HALVA (Q48335) Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)|
           (GAPDH) (NAD(P)-dependent glyceraldehyde-3-phosphate
           dehydrogenase)
          Length = 335

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 20/60 (33%), Positives = 31/60 (51%)
 Frame = +1

Query: 73  SETRRVGLVRSVNAKDRTVSVSWFRSSLHSQEPRVIECTEVVSAYELDGHPDYDYCYGDV 252
           SE  RVGL    N   R +  + FR+SLHS +  ++   +V+   E+D    YD   G++
Sbjct: 3   SEPVRVGL----NGFGR-IGRNVFRASLHSDDVEIVGINDVMDDSEIDYFAQYDSVMGEL 57

>NNP1_MOUSE (P56183) NNP-1 protein (Novel nuclear protein 1) (Nop52)|
          Length = 494

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
 Frame = +1

Query: 445 NIVGFQDGEIEVTWGDGSVSKVGPHEIYVVGREDDGGSLDD--GAPSDAGSWETXDDNEM 618
           N +  Q GE E + GD   +  G          DDG + DD  G  SD G  +  D ++ 
Sbjct: 234 NELDTQSGEGEASDGDDGEASDG----------DDGEASDDDDGEASDGGDGDVADSDDS 283

Query: 619 DLPDDPAND 645
           D  DD   D
Sbjct: 284 DGADDDDGD 292

>MACF1_MOUSE (Q9QXZ0) Microtubule-actin crosslinking factor 1 (Actin|
           cross-linking family 7)
          Length = 5327

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
 Frame = +1

Query: 22  SQEQYAVEKVSDDVDQPSET-RRVGLVRSVNAKDRTV------SVSWFRSSLHSQEPRVI 180
           + E+  V+   ++++Q  E   R+G+ R ++A+D  V      SV  + SS++   P+V 
Sbjct: 242 NMERVQVQSNRENLEQAFEVAERLGVTRLLDAEDVDVPSPDEKSVITYVSSIYDAFPKVP 301

Query: 181 ECTEVVSAYELD 216
           E  E +SA E+D
Sbjct: 302 EGGEGISATEVD 313


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.309    0.132    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,059,277
Number of Sequences: 219361
Number of extensions: 1715662
Number of successful extensions: 3748
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3706
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)