| Clone Name | bags36p12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_848457.1| PREDICTED: Canis familiaris similar to sushi domain containing 4 (LOC610891), mRNA Length = 1416 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 cgcatcttcgatctgagggac 59 ||||||||||||||||||||| Sbjct: 273 cgcatcttcgatctgagggac 253
>gb|DQ465377.1| Oreochromis mossambicus smoothelin-like mRNA, partial cds Length = 1402 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 485 ttattcaaatggattcaacat 505 ||||||||||||||||||||| Sbjct: 1000 ttattcaaatggattcaacat 1020
>gb|AC109832.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone P0038B07, complete sequence Length = 149697 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 cgattgtttgttgagatgat 409 |||||||||||||||||||| Sbjct: 8015 cgattgtttgttgagatgat 7996
>ref|NM_001005784.1| Mus musculus InaD-like (Drosophila) (Inadl), transcript variant 2, mRNA Length = 3335 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 cctcgaaggcgatccaggac 105 |||||||||||||||||||| Sbjct: 195 cctcgaaggcgatccaggac 176
>ref|NM_172696.2| Mus musculus InaD-like (Drosophila) (Inadl), transcript variant 1, mRNA Length = 7305 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 cctcgaaggcgatccaggac 105 |||||||||||||||||||| Sbjct: 195 cctcgaaggcgatccaggac 176
>emb|CR751601.8| Zebrafish DNA sequence from clone CH211-162E3 in linkage group 14, complete sequence Length = 141943 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 gaatctgaatggttttcgca 441 |||||||||||||||||||| Sbjct: 108172 gaatctgaatggttttcgca 108191
>gb|AC087560.26| Mus musculus strain C57BL/6J clone rp23-448g13 map X, complete sequence Length = 203953 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ggtccttggccaaattaatg 465 |||||||||||||||||||| Sbjct: 109237 ggtccttggccaaattaatg 109218
>emb|CR378670.1| Photobacterium profundum SS9; segment 8/12 Length = 348672 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ccacgagctttcgcatcttc 161 |||||||||||||||||||| Sbjct: 285498 ccacgagctttcgcatcttc 285517
>gb|AC144716.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0108D09, complete sequence Length = 127371 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 cgattgtttgttgagatgat 409 |||||||||||||||||||| Sbjct: 5862 cgattgtttgttgagatgat 5881
>dbj|AK147866.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270072G07 product:channel-interacting PDZ domain protein, full insert sequence Length = 4319 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 cctcgaaggcgatccaggac 105 |||||||||||||||||||| Sbjct: 144 cctcgaaggcgatccaggac 125
>dbj|AK050545.1| Mus musculus adult pancreas islet cells cDNA, RIKEN full-length enriched library, clone:C820013I09 product:hypothetical PDZ domain (also known as DHR or GLGF) containing protein, full insert sequence Length = 3623 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 cctcgaaggcgatccaggac 105 |||||||||||||||||||| Sbjct: 167 cctcgaaggcgatccaggac 148
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 cgattgtttgttgagatgat 409 |||||||||||||||||||| Sbjct: 23673623 cgattgtttgttgagatgat 23673604
>gb|BC050846.1| Mus musculus InaD-like (Drosophila), mRNA (cDNA clone IMAGE:6335092), complete cds Length = 2172 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 cctcgaaggcgatccaggac 105 |||||||||||||||||||| Sbjct: 129 cctcgaaggcgatccaggac 110
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 cgattgtttgttgagatgat 409 |||||||||||||||||||| Sbjct: 23983559 cgattgtttgttgagatgat 23983540
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 cacgagctttcgcatcttct 162 |||||||||||||||||||| Sbjct: 1668343 cacgagctttcgcatcttct 1668362
>emb|AL671229.11| Mouse DNA sequence from clone RP23-93N10 on chromosome 4, complete sequence Length = 237082 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 cctcgaaggcgatccaggac 105 |||||||||||||||||||| Sbjct: 21438 cctcgaaggcgatccaggac 21419
>emb|AL671920.9| Mouse DNA sequence from clone RP23-445A22 on chromosome X, complete sequence Length = 166399 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ggtccttggccaaattaatg 465 |||||||||||||||||||| Sbjct: 60441 ggtccttggccaaattaatg 60422 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,629,567 Number of Sequences: 3902068 Number of extensions: 3629567 Number of successful extensions: 63942 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63864 Number of HSP's gapped (non-prelim): 78 length of query: 555 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 532 effective length of database: 17,143,297,704 effective search space: 9120234378528 effective search space used: 9120234378528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)