ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags37e19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_476648.1| Oryza sativa (japonica cultivar-group), mRNA Length = 730 Score = 438 bits (221), Expect = e-120 Identities = 341/381 (89%) Strand = Plus / Plus Query: 156 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 215 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 133 ccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagtca 192 Query: 216 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 275 |||||||||||||| ||||| ||||| |||||||| ||||| || || || ||||||||| Sbjct: 193 agtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagcat 252 Query: 276 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 335 ||||||||| | ||||||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 253 gctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttggtt 312 Query: 336 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 395 ||||| || ||||||||||||||||||||| | || |||||||||||||| || |||||| Sbjct: 313 aaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtgctaagactctt 372 Query: 396 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 455 ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 373 ggcgagtgggcagggctttgcaagattgactctgagggcaaggcaaggaaggttgtgggc 432 Query: 456 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 515 ||||| || |||||||| ||||||||||||||||| || ||||| ||| |||| |||||| Sbjct: 433 tgctcctgcgtcgttgtcaaggactatggtgaagagtctgagggccttaacatagtgcag 492 Query: 516 gaatacgtcaagtcgcactag 536 || || ||||| ||||||||| Sbjct: 493 gactatgtcaaatcgcactag 513
>dbj|AK121635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051C16, full insert sequence Length = 734 Score = 438 bits (221), Expect = e-120 Identities = 341/381 (89%) Strand = Plus / Plus Query: 156 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 215 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 137 ccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagtca 196 Query: 216 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 275 |||||||||||||| ||||| ||||| |||||||| ||||| || || || ||||||||| Sbjct: 197 agtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagcat 256 Query: 276 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 335 ||||||||| | ||||||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 257 gctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttggtt 316 Query: 336 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 395 ||||| || ||||||||||||||||||||| | || |||||||||||||| || |||||| Sbjct: 317 aaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtgctaagactctt 376 Query: 396 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 455 ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 377 ggcgagtgggcagggctttgcaagattgactctgagggcaaggcaaggaaggttgtgggc 436 Query: 456 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 515 ||||| || |||||||| ||||||||||||||||| || ||||| ||| |||| |||||| Sbjct: 437 tgctcctgcgtcgttgtcaaggactatggtgaagagtctgagggccttaacatagtgcag 496 Query: 516 gaatacgtcaagtcgcactag 536 || || ||||| ||||||||| Sbjct: 497 gactatgtcaaatcgcactag 517
>dbj|AK058680.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-A01, full insert sequence Length = 730 Score = 438 bits (221), Expect = e-120 Identities = 341/381 (89%) Strand = Plus / Plus Query: 156 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 215 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 133 ccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagtca 192 Query: 216 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 275 |||||||||||||| ||||| ||||| |||||||| ||||| || || || ||||||||| Sbjct: 193 agtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagcat 252 Query: 276 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 335 ||||||||| | ||||||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 253 gctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttggtt 312 Query: 336 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 395 ||||| || ||||||||||||||||||||| | || |||||||||||||| || |||||| Sbjct: 313 aaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtgctaagactctt 372 Query: 396 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 455 ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 373 ggcgagtgggcagggctttgcaagattgactctgagggcaaggcaaggaaggttgtgggc 432 Query: 456 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 515 ||||| || |||||||| ||||||||||||||||| || ||||| ||| |||| |||||| Sbjct: 433 tgctcctgcgtcgttgtcaaggactatggtgaagagtctgagggccttaacatagtgcag 492 Query: 516 gaatacgtcaagtcgcactag 536 || || ||||| ||||||||| Sbjct: 493 gactatgtcaaatcgcactag 513
>gb|AY109069.1| Zea mays PCO128954 mRNA sequence Length = 755 Score = 377 bits (190), Expect = e-101 Identities = 331/378 (87%) Strand = Plus / Plus Query: 159 gttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtcaagt 218 |||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 174 gttcttggagagccaatggacttgatgactgcgctgcagctggtgatgaagaagtcaagt 233 Query: 219 gctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcatgct 278 ||||||||||| ||||| ||||| || || || ||||| || || ||||||||||||||| Sbjct: 234 gctcatgatggacttgtgaagggtcttcgcgaggctgccaaggccattgagaagcatgct 293 Query: 279 gctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaag 338 |||||| | || || ||||||||||| || |||||||| |||||||| ||||| || ||| Sbjct: 294 gctcagctttgcgttcttgctgaggactgtgaccagccagattatgtcaagctggtgaag 353 Query: 339 gcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactcttggc 398 || ||||||||||| ||||| |||||| | ||||| || ||| ||| || ||||||||| Sbjct: 354 gcgctctgtgctgaacacaatgttcaccttgtcactgttcctgctgctaagactcttggc 413 Query: 399 gagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgc 458 ||||||||||||||||||||||||||||| |||||||||||||| ||||| || |||||| Sbjct: 414 gagtgggctgggctttgcaagattgactccgagggcaaggcaaggaaggttgtaggctgc 473 Query: 459 tcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcaggaa 518 || ||||||||||| |||||||| |||||||| || ||||| ||| |||| |||||||| Sbjct: 474 tcctgtgtcgttgtcaaggactacggtgaagaatctgagggccttaacatagtgcaggag 533 Query: 519 tacgtcaagtcgcactag 536 || ||||||||||||||| Sbjct: 534 tatgtcaagtcgcactag 551
>gb|AF067732.1|AF067732 Hordeum vulgare ribosomal protein S12 (rps12) mRNA, complete cds Length = 760 Score = 377 bits (190), Expect = e-101 Identities = 325/370 (87%) Strand = Plus / Plus Query: 160 ttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtcaagtg 219 ||||||| ||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 154 ttcttggtgagccaatggacttgatgactgctctacagcttgtcatgaagaagtcaagtg 213 Query: 220 ctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcatgctg 279 |||||||||||||||| ||||| |||||||| ||||| || | |||||||||||||||| Sbjct: 214 ctcatgatggccttgtgaaggggctccgtgaggctgccaagtccattgagaagcatgctg 273 Query: 280 ctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaagg 339 ||||| | |||||||| ||||||||||| |||||||||||||| ||||||||||| |||| Sbjct: 274 ctcagctttgtgtgctggctgaggattgtgaccagcctgattacgtgaagcttgttaagg 333 Query: 340 cactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactcttggcg 399 |||| || ||||||||||| |||||| |||| || ||||| ||||| |||||||| || | Sbjct: 334 cactatgcgctgagcacaatgttcacctggttactgtgccaagtgctaaaactctcggag 393 Query: 400 agtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgct 459 ||||||| |||||||||||||| ||| |||||||||||||||| ||||| || ||||||| Sbjct: 394 agtgggcagggctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgct 453 Query: 460 catgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcaggaat 519 | || | ||||| ||||||||||||||||| || ||||| ||| ||||||||||| | | Sbjct: 454 cttgcattgttgtcaaggactatggtgaagaatccgagggccttaacatcgtgcagcagt 513 Query: 520 acgtcaagtc 529 | |||||||| Sbjct: 514 atgtcaagtc 523
>ref|XM_477173.1| Oryza sativa (japonica cultivar-group), mRNA Length = 751 Score = 375 bits (189), Expect = e-100 Identities = 333/381 (87%) Strand = Plus / Plus Query: 156 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 215 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 156 ccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtca 215 Query: 216 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 275 || ||||||||||| || || ||||| |||||||| || || || || |||||||||||| Sbjct: 216 agcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcat 275 Query: 276 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 335 || |||||| | || |||||||||||||| || ||||||||||||||||| ||| | ||| Sbjct: 276 gccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtc 335 Query: 336 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 395 ||||||||||| ||||||||||| |||||| | || |||||||||||||| ||||||||| Sbjct: 336 aaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgctaaaactctt 395 Query: 396 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 455 ||||||||||| ||||||||||||||||| |||||||||||||| || ||||| || ||| Sbjct: 396 ggcgagtgggcagggctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggc 455 Query: 456 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 515 ||||| || |||||||| ||||||| |||||||| || ||||| || |||| || ||| Sbjct: 456 tgctcctgcgtcgttgtcaaggacttcggtgaagagtcagagggcctcaacatagtccag 515 Query: 516 gaatacgtcaagtcgcactag 536 || || |||||||| |||||| Sbjct: 516 gactatgtcaagtcccactag 536
>dbj|AK121720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033080B09, full insert sequence Length = 754 Score = 375 bits (189), Expect = e-100 Identities = 333/381 (87%) Strand = Plus / Plus Query: 156 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 215 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 153 ccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtca 212 Query: 216 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 275 || ||||||||||| || || ||||| |||||||| || || || || |||||||||||| Sbjct: 213 agcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcat 272 Query: 276 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 335 || |||||| | || |||||||||||||| || ||||||||||||||||| ||| | ||| Sbjct: 273 gccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtc 332 Query: 336 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 395 ||||||||||| ||||||||||| |||||| | || |||||||||||||| ||||||||| Sbjct: 333 aaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgctaaaactctt 392 Query: 396 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 455 ||||||||||| ||||||||||||||||| |||||||||||||| || ||||| || ||| Sbjct: 393 ggcgagtgggcagggctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggc 452 Query: 456 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 515 ||||| || |||||||| ||||||| |||||||| || ||||| || |||| || ||| Sbjct: 453 tgctcctgcgtcgttgtcaaggacttcggtgaagagtcagagggcctcaacatagtccag 512 Query: 516 gaatacgtcaagtcgcactag 536 || || |||||||| |||||| Sbjct: 513 gactatgtcaagtcccactag 533
>dbj|AK059090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B10, full insert sequence Length = 751 Score = 375 bits (189), Expect = e-100 Identities = 333/381 (87%) Strand = Plus / Plus Query: 156 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 215 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 156 ccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtca 215 Query: 216 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 275 || ||||||||||| || || ||||| |||||||| || || || || |||||||||||| Sbjct: 216 agcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcat 275 Query: 276 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 335 || |||||| | || |||||||||||||| || ||||||||||||||||| ||| | ||| Sbjct: 276 gccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtc 335 Query: 336 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 395 ||||||||||| ||||||||||| |||||| | || |||||||||||||| ||||||||| Sbjct: 336 aaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgctaaaactctt 395 Query: 396 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 455 ||||||||||| ||||||||||||||||| |||||||||||||| || ||||| || ||| Sbjct: 396 ggcgagtgggcagggctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggc 455 Query: 456 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 515 ||||| || |||||||| ||||||| |||||||| || ||||| || |||| || ||| Sbjct: 456 tgctcctgcgtcgttgtcaaggacttcggtgaagagtcagagggcctcaacatagtccag 515 Query: 516 gaatacgtcaagtcgcactag 536 || || |||||||| |||||| Sbjct: 516 gactatgtcaagtcccactag 536
>gb|BT018309.1| Zea mays clone EL01T0206H08.c mRNA sequence Length = 608 Score = 361 bits (182), Expect = 2e-96 Identities = 344/398 (86%) Strand = Plus / Plus Query: 139 cagttgcggccccaattccggttcttggagagcccatggacttgatgactgctctgcagc 198 |||||| |||||| | ||||| ||||| ||||| ||||||||||||||||||||||||| Sbjct: 104 cagttgaggcccctaccccggtccttggggagccgatggacttgatgactgctctgcagc 163 Query: 199 ttgtgatgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagctgcaa 258 |||| ||||||||||| ||||||||||||||||||| ||||| || ||||| ||||| | Sbjct: 164 ttgtcatgaagaagtcgggtgctcatgatggccttgttaagggtcttcgtgaggctgcca 223 Query: 259 aagcgattgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctg 318 |||| ||||||||||||||||||||| | || |||||||| ||||| || |||||||||| Sbjct: 224 aagcaattgagaagcatgctgctcagctttgcgtgcttgcggaggactgtgaccagcctg 283 Query: 319 attatgtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgc 378 ||||||| ||||| || ||||| || || ||||||||||||||||| |||| || |||| Sbjct: 284 attatgtcaagctggtgaaggctctttgctctgagcacaacgttcacctggttactgtgc 343 Query: 379 ctagtgccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaagg 438 |||| || |||||||||||||| ||| ||||||||||||||||||| ||||||||||||| Sbjct: 344 ctagcgctaaaactcttggcgaatggtctgggctttgcaagattgattctgagggcaagg 403 Query: 439 caagaaaggtggtgggctgctcatgtgtcgttgtgaaggactatggtgaagattcggagg 498 | || ||||| ||||| ||||| ||||| || || ||||||||||| ||||| || |||| Sbjct: 404 cgaggaaggttgtgggttgctcctgtgttgtcgtcaaggactatggcgaagaatctgagg 463 Query: 499 gtcttcacatcgtgcaggaatacgtcaagtcgcactag 536 | ||| |||| || ||||| ||||||||||| |||||| Sbjct: 464 gccttaacatagttcaggagtacgtcaagtcacactag 501
>gb|AY104036.1| Zea mays PCO068483 mRNA sequence Length = 845 Score = 359 bits (181), Expect = 6e-96 Identities = 331/381 (86%) Strand = Plus / Plus Query: 156 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 215 ||||||||||| || || |||||| |||||||||| |||||||| || |||||||||||| Sbjct: 201 ccggttcttggggaaccgatggacctgatgactgccctgcagctcgtcatgaagaagtca 260 Query: 216 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 275 ||||||||||||||||||| ||||| || ||||| ||||| ||||| || ||||||||| Sbjct: 261 ggtgctcatgatggccttgtgaagggtcttcgtgaggctgccaaagccatcgagaagcat 320 Query: 276 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 335 || |||||| |||| |||||||| ||||| |||||||||||||||||||| ||||| || Sbjct: 321 gccgctcagctctgcgtgcttgccgaggactgcgaccagcctgattatgtcaagctggtg 380 Query: 336 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 395 ||||| ||||| ||||||||||| || ||| |||| || |||||||| |||||||||||| Sbjct: 381 aaggctctctgcgctgagcacaatgtccacctggttactgtgcctagcgccaaaactctt 440 Query: 396 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 455 || ||||||||||||||||||||||| ||||||||||||||||| || ||||| || ||| Sbjct: 441 ggagagtgggctgggctttgcaagatcgactctgagggcaaggcgaggaaggttgtaggc 500 Query: 456 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 515 ||||| ||||| ||||| |||||||| || ||||| || || || ||| |||| |||||| Sbjct: 501 tgctcctgtgttgttgtcaaggactacggcgaagaatctgaaggccttaacatagtgcag 560 Query: 516 gaatacgtcaagtcgcactag 536 || |||||||| ||||||||| Sbjct: 561 gagtacgtcaaatcgcactag 581
>gb|BT017581.1| Zea mays clone EL01N0429E05.c mRNA sequence Length = 747 Score = 335 bits (169), Expect = 9e-89 Identities = 328/381 (86%) Strand = Plus / Plus Query: 156 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 215 ||||||||||| || || |||||| |||||||||| |||||||| || |||||||||||| Sbjct: 108 ccggttcttggggaaccgatggacctgatgactgccctgcagctcgtcatgaagaagtca 167 Query: 216 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 275 | | | ||||||||||||| ||||| || ||||| ||||| ||||| || ||||||||| Sbjct: 168 gggggtgatgatggccttgtgaagggtcttcgtgaggctgccaaagccatcgagaagcat 227 Query: 276 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 335 || |||||| |||| |||||||| ||||| |||||||||||||||||||| ||||| || Sbjct: 228 gccgctcagctctgcgtgcttgccgaggactgcgaccagcctgattatgtcaagctggtg 287 Query: 336 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 395 ||||| ||||| ||||||||||| || ||| |||| || |||||||| |||||||||||| Sbjct: 288 aaggctctctgcgctgagcacaatgtccacctggttactgtgcctagcgccaaaactctt 347 Query: 396 ggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggc 455 || ||||||||||||||||||||||| ||||||||||||||||| || ||||| || ||| Sbjct: 348 ggagagtgggctgggctttgcaagatcgactctgagggcaaggcgaggaaggttgtaggc 407 Query: 456 tgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcag 515 ||||| ||||| ||||| |||||||| || ||||| || || || ||| |||| |||||| Sbjct: 408 tgctcctgtgttgttgtcaaggactacggcgaagaatctgaaggccttaacatagtgcag 467 Query: 516 gaatacgtcaagtcgcactag 536 || |||||||| ||||||||| Sbjct: 468 gagtacgtcaaatcgcactag 488
>gb|BT017926.1| Zea mays clone EL01N0519G01.c mRNA sequence Length = 580 Score = 307 bits (155), Expect = 2e-80 Identities = 296/343 (86%) Strand = Plus / Plus Query: 194 gcagcttgtgatgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagc 253 |||||| |||||||||||||||||||||||||| || ||||| ||||| |||||||| || Sbjct: 9 gcagctcgtgatgaagaagtcaagtgctcatgacggacttgtgaagggtctccgtgaggc 68 Query: 254 tgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgacca 313 ||| || || || |||||||| || |||||| | || |||||||||||||| || ||||| Sbjct: 69 tgccaaggccatcgagaagcacgccgctcagctttgcgtgcttgctgaggactgtgacca 128 Query: 314 gcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcac 373 ||| ||||| || ||||| || ||||||||||| ||||||||||| |||||| ||||||| Sbjct: 129 gccagattacgtcaagctggtgaaggcactctgcgctgagcacaatgttcacctggtcac 188 Query: 374 cgtgcctagtgccaaaactcttggcgagtgggctgggctttgcaagattgactctgaggg 433 || ||| || || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 tgttcctgccgctaagactcttggcgagtgggctgggctttgcaagattgactctgaggg 248 Query: 434 caaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaaggactatggtgaagattc 493 ||||||||| ||||| || |||||||| || ||||| || |||||||| |||||||| || Sbjct: 249 caaggcaaggaaggttgtaggctgctcctgcgtcgtcgtcaaggactacggtgaagaatc 308 Query: 494 ggagggtcttcacatcgtgcaggaatacgtcaagtcgcactag 536 ||||| ||| |||| |||||||| || ||||||||||||||| Sbjct: 309 tgagggccttaacatagtgcaggagtatgtcaagtcgcactag 351
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 291 bits (147), Expect = 1e-75 Identities = 225/251 (89%) Strand = Plus / Plus Query: 156 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 215 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2647144 ccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagtca 2647203 Query: 216 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 275 |||||||||||||| ||||| ||||| |||||||| ||||| || || || ||||||||| Sbjct: 2647204 agtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagcat 2647263 Query: 276 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 335 ||||||||| | ||||||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 2647264 gctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttggtt 2647323 Query: 336 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 395 ||||| || ||||||||||||||||||||| | || |||||||||||||| || |||||| Sbjct: 2647324 aaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtgctaagactctt 2647383 Query: 396 ggcgagtgggc 406 ||||||||||| Sbjct: 2647384 ggcgagtgggc 2647394 Score = 283 bits (143), Expect = 3e-73 Identities = 224/251 (89%) Strand = Plus / Minus Query: 156 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 215 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 7266262 ccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtca 7266203 Query: 216 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 275 || ||||||||||| || || ||||| |||||||| || || || || |||||||||||| Sbjct: 7266202 agcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcat 7266143 Query: 276 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 335 || |||||| | || |||||||||||||| || ||||||||||||||||| ||| | ||| Sbjct: 7266142 gccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtc 7266083 Query: 336 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 395 ||||||||||| ||||||||||| |||||| | || |||||||||||||| ||||||||| Sbjct: 7266082 aaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgctaaaactctt 7266023 Query: 396 ggcgagtgggc 406 ||||||||||| Sbjct: 7266022 ggcgagtgggc 7266012 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 410 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 469 ||||||||||||||||||||||||||||||||| ||||| ||||||||||| || ||||| Sbjct: 2648042 gctttgcaagattgactctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgt 2648101 Query: 470 tgtgaagg 477 ||| |||| Sbjct: 2648102 tgtcaagg 2648109 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 410 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 469 ||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||| Sbjct: 7265747 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 7265688 Query: 470 tgtgaagg 477 ||| |||| Sbjct: 7265687 tgtcaagg 7265680 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 475 aggactatggtgaagattcggagggtcttcacatcgtgcaggaatacgtcaagtcgcact 534 |||||||||||||||| || ||||| ||| |||| |||||||| || ||||| ||||||| Sbjct: 2648197 aggactatggtgaagagtctgagggccttaacatagtgcaggactatgtcaaatcgcact 2648256 Query: 535 ag 536 || Sbjct: 2648257 ag 2648258
>dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1027_G06 Length = 121885 Score = 291 bits (147), Expect = 1e-75 Identities = 225/251 (89%) Strand = Plus / Plus Query: 156 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 215 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 72862 ccggttcttggggagcccatggatctgatgactgctctgcagcttgtgatgaagaagtca 72921 Query: 216 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 275 |||||||||||||| ||||| ||||| |||||||| ||||| || || || ||||||||| Sbjct: 72922 agtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggccatcgagaagcat 72981 Query: 276 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 335 ||||||||| | ||||||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 72982 gctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatgtcaagttggtt 73041 Query: 336 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 395 ||||| || ||||||||||||||||||||| | || |||||||||||||| || |||||| Sbjct: 73042 aaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtgctaagactctt 73101 Query: 396 ggcgagtgggc 406 ||||||||||| Sbjct: 73102 ggcgagtgggc 73112 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 410 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 469 ||||||||||||||||||||||||||||||||| ||||| ||||||||||| || ||||| Sbjct: 73760 gctttgcaagattgactctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgt 73819 Query: 470 tgtgaagg 477 ||| |||| Sbjct: 73820 tgtcaagg 73827 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 475 aggactatggtgaagattcggagggtcttcacatcgtgcaggaatacgtcaagtcgcact 534 |||||||||||||||| || ||||| ||| |||| |||||||| || ||||| ||||||| Sbjct: 73915 aggactatggtgaagagtctgagggccttaacatagtgcaggactatgtcaaatcgcact 73974 Query: 535 ag 536 || Sbjct: 73975 ag 73976
>ref|XM_477174.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2015 Score = 283 bits (143), Expect = 3e-73 Identities = 224/251 (89%) Strand = Plus / Plus Query: 156 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 215 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1085 ccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtca 1144 Query: 216 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 275 || ||||||||||| || || ||||| |||||||| || || || || |||||||||||| Sbjct: 1145 agcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcat 1204 Query: 276 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 335 || |||||| | || |||||||||||||| || ||||||||||||||||| ||| | ||| Sbjct: 1205 gccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtc 1264 Query: 336 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 395 ||||||||||| ||||||||||| |||||| | || |||||||||||||| ||||||||| Sbjct: 1265 aaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgctaaaactctt 1324 Query: 396 ggcgagtgggc 406 ||||||||||| Sbjct: 1325 ggcgagtgggc 1335 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 410 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 469 ||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||| Sbjct: 1600 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 1659 Query: 470 tgtgaagg 477 ||| |||| Sbjct: 1660 tgtcaagg 1667
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 283 bits (143), Expect = 3e-73 Identities = 224/251 (89%) Strand = Plus / Minus Query: 156 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 215 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 106746 ccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtca 106687 Query: 216 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 275 || ||||||||||| || || ||||| |||||||| || || || || |||||||||||| Sbjct: 106686 agcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcat 106627 Query: 276 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 335 || |||||| | || |||||||||||||| || ||||||||||||||||| ||| | ||| Sbjct: 106626 gccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtc 106567 Query: 336 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 395 ||||||||||| ||||||||||| |||||| | || |||||||||||||| ||||||||| Sbjct: 106566 aaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgctaaaactctt 106507 Query: 396 ggcgagtgggc 406 ||||||||||| Sbjct: 106506 ggcgagtgggc 106496 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 410 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 469 ||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||| Sbjct: 106231 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 106172 Query: 470 tgtgaagg 477 ||| |||| Sbjct: 106171 tgtcaagg 106164
>dbj|AK071026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078K20, full insert sequence Length = 2015 Score = 283 bits (143), Expect = 3e-73 Identities = 224/251 (89%) Strand = Plus / Plus Query: 156 ccggttcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 215 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1085 ccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtca 1144 Query: 216 agtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcat 275 || ||||||||||| || || ||||| |||||||| || || || || |||||||||||| Sbjct: 1145 agcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcat 1204 Query: 276 gctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtc 335 || |||||| | || |||||||||||||| || ||||||||||||||||| ||| | ||| Sbjct: 1205 gccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtc 1264 Query: 336 aaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactctt 395 ||||||||||| ||||||||||| |||||| | || |||||||||||||| ||||||||| Sbjct: 1265 aaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgctaaaactctt 1324 Query: 396 ggcgagtgggc 406 ||||||||||| Sbjct: 1325 ggcgagtgggc 1335 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 410 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 469 ||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||| Sbjct: 1600 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 1659 Query: 470 tgtgaagg 477 ||| |||| Sbjct: 1660 tgtcaagg 1667
>emb|BX819283.1|CNS0A9Q1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB63ZH09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 702 Score = 123 bits (62), Expect = 6e-25 Identities = 170/206 (82%) Strand = Plus / Plus Query: 264 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 323 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 220 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 279 Query: 324 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 383 ||||||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 280 gtgaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 339 Query: 384 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 443 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 340 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 399 Query: 444 aaggtggtgggctgctcatgtgtcgt 469 ||||| || || ||||||||| |||| Sbjct: 400 aaggttgttggatgctcatgtctcgt 425
>ref|NM_179850.1| Arabidopsis thaliana structural constituent of ribosome AT2G32060 transcript variant AT2G32060.3 mRNA, complete cds Length = 694 Score = 115 bits (58), Expect = 2e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 264 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 323 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 239 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 298 Query: 324 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 383 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 299 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 358 Query: 384 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 443 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 359 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 418 Query: 444 aaggtggtgggctgctcatgtgtcgt 469 ||||| || || ||||||||| |||| Sbjct: 419 aaggttgttggatgctcatgtctcgt 444
>ref|NM_128766.4| Arabidopsis thaliana structural constituent of ribosome AT2G32060 transcript variant AT2G32060.1 mRNA, complete cds Length = 759 Score = 115 bits (58), Expect = 2e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 264 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 323 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 277 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 336 Query: 324 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 383 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 337 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 396 Query: 384 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 443 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 397 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 456 Query: 444 aaggtggtgggctgctcatgtgtcgt 469 ||||| || || ||||||||| |||| Sbjct: 457 aaggttgttggatgctcatgtctcgt 482
>ref|NM_179849.2| Arabidopsis thaliana structural constituent of ribosome AT2G32060 transcript variant AT2G32060.2 mRNA, complete cds Length = 723 Score = 115 bits (58), Expect = 2e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 264 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 323 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 241 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 300 Query: 324 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 383 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 301 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 360 Query: 384 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 443 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 361 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 420 Query: 444 aaggtggtgggctgctcatgtgtcgt 469 ||||| || || ||||||||| |||| Sbjct: 421 aaggttgttggatgctcatgtctcgt 446
>gb|AY133636.1| Arabidopsis thaliana At2g32060/F22D22.19 mRNA, complete cds Length = 435 Score = 115 bits (58), Expect = 2e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 264 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 323 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 163 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 222 Query: 324 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 383 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 223 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 282 Query: 384 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 443 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 283 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 342 Query: 444 aaggtggtgggctgctcatgtgtcgt 469 ||||| || || ||||||||| |||| Sbjct: 343 aaggttgttggatgctcatgtctcgt 368
>gb|AY050324.1| Arabidopsis thaliana At2g32060/F22D22.19 mRNA, complete cds Length = 696 Score = 115 bits (58), Expect = 2e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 264 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 323 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 241 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 300 Query: 324 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 383 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 301 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 360 Query: 384 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 443 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 361 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 420 Query: 444 aaggtggtgggctgctcatgtgtcgt 469 ||||| || || ||||||||| |||| Sbjct: 421 aaggttgttggatgctcatgtctcgt 446
>gb|AY085161.1| Arabidopsis thaliana clone 13453 mRNA, complete sequence Length = 732 Score = 115 bits (58), Expect = 2e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 264 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 323 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 277 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 336 Query: 324 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 383 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 337 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 396 Query: 384 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 443 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 397 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 456 Query: 444 aaggtggtgggctgctcatgtgtcgt 469 ||||| || || ||||||||| |||| Sbjct: 457 aaggttgttggatgctcatgtctcgt 482
>gb|AF154659.1| Nicotiana tabacum clone PR50 mRNA sequence Length = 708 Score = 97.6 bits (49), Expect = 4e-17 Identities = 291/369 (78%), Gaps = 2/369 (0%) Strand = Plus / Minus Query: 162 cttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtcaagtgct 221 ||||| |||||||||||| | ||||| ||||||||||| ||| | | |||||| | ||| Sbjct: 581 cttggggagcccatggacatcatgaccgctctgcagctggtgctcaggaagtctaaagct 522 Query: 222 catgatggccttg-tcaagggactccgtgaagctgcaaaagcgattgagaagcatgctgc 280 |||| || |||| || ||| ||||| ||||| ||| || | |||||||||||||||||| Sbjct: 521 catggaggacttgctcgagg-actccatgaaggtgctaaggtgattgagaagcatgctgc 463 Query: 281 tcagatctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaaggc 340 ||| | |||||||| || ||||| ||||||||||| || ||||| ||||| ||||| || Sbjct: 462 gcagctttgtgtgctagcagaggactgcgaccagccagactatgtcaagctggtcaaagc 403 Query: 341 actctgtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactcttggcga 400 || |||||||| ||||| || ||| | || || || | ||| |||||||||||||| Sbjct: 402 tctttgtgctgatcacaatgtcagtttgattacagttcccaatgcaaaaactcttggcga 343 Query: 401 gtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctc 460 |||||||| | ||||| ||||| ||||| || || ||||| || || || || || Sbjct: 342 atgggctggtttatgcaaaattgattctgaagggaaagcaaggaaagttgttggttgtgg 283 Query: 461 atgtgtcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcaggaata 520 ||||| || |||||||| ||||| ||||| | |||||||| || ||||| ||||| || Sbjct: 282 ctgtgttgtcgtgaaggattatggggaagagactgagggtctccatatcgtccaggagta 223 Query: 521 cgtcaagtc 529 ||| ||||| Sbjct: 222 cgtgaagtc 214
>ref|NM_101461.3| Arabidopsis thaliana structural constituent of ribosome AT1G15930 transcript variant AT1G15930.1 mRNA, complete cds Length = 861 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 297 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 356 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 379 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 438 Query: 357 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 416 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 439 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 498 Query: 417 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 476 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 499 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 558 Query: 477 gact 480 |||| Sbjct: 559 gact 562
>ref|NM_179342.1| Arabidopsis thaliana structural constituent of ribosome AT1G15930 transcript variant AT1G15930.2 mRNA, complete cds Length = 758 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 297 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 356 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 276 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 335 Query: 357 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 416 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 336 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 395 Query: 417 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 476 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 396 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 455 Query: 477 gact 480 |||| Sbjct: 456 gact 459
>gb|AY054130.1| Arabidopsis thaliana At1g15930/T24D18_3 mRNA, complete cds Length = 435 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 297 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 356 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 196 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 255 Query: 357 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 416 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 256 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 315 Query: 417 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 476 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 316 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 375 Query: 477 gact 480 |||| Sbjct: 376 gact 379
>gb|AF380626.1|AF380626 Arabidopsis thaliana At1g15930/T24D18_3 mRNA, complete cds Length = 692 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 297 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 356 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 276 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 335 Query: 357 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 416 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 336 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 395 Query: 417 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 476 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 396 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 455 Query: 477 gact 480 |||| Sbjct: 456 gact 459
>emb|BX815848.1|CNS0ABMM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH12ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 658 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 297 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 356 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 252 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 311 Query: 357 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 416 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 312 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 371 Query: 417 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 476 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 372 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 431 Query: 477 gact 480 |||| Sbjct: 432 gact 435
>emb|BX818653.1|CNS0AB7K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL90ZB11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 687 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 297 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 356 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 241 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 300 Query: 357 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 416 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 301 gaagtcaggttgctaacagtaccaagtgccaagacccttggcgaatgggctggtctctgc 360 Query: 417 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 476 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 361 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 420 Query: 477 gact 480 |||| Sbjct: 421 gact 424
>gb|AY084613.1| Arabidopsis thaliana clone 11328 mRNA, complete sequence Length = 782 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 297 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 356 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 379 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 438 Query: 357 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 416 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 439 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 498 Query: 417 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 476 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 499 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 558 Query: 477 gact 480 |||| Sbjct: 559 gact 562
>emb|BX813855.1|CNS0AEMV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB43ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 635 Score = 93.7 bits (47), Expect = 6e-16 Identities = 140/171 (81%) Strand = Plus / Plus Query: 310 accagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttgg 369 |||||||||||||||| |||||||| ||||| ||||||||||| ||| | || ||| Sbjct: 268 accagcctgattatgtcaagcttgtgaaggctctctgtgctgatcacgaagtcaggttgc 327 Query: 370 tcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgcaagattgactctg 429 | || || || |||||||| || |||||||| |||||||| || ||||||||||| |||| Sbjct: 328 taacagttccaagtgccaagacccttggcgaatgggctggtctctgcaagattgattctg 387 Query: 430 agggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaaggact 480 |||| || || || ||||| || || ||||||||| | ||||| ||||||| Sbjct: 388 agggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaaggact 438
>emb|CT573502.2| Medicago truncatula chromosome 5 clone mte1-69f21, COMPLETE SEQUENCE Length = 89977 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 248 tgaagctgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgctgaggattg 307 ||||| |||||||| |||||||||||||||||| ||| | ||||| || ||||| ||||| Sbjct: 44266 tgaaggtgcaaaagtgattgagaagcatgctgcacagctttgtgttctagctgaagattg 44207 Query: 308 cgaccagcctgattatgt 325 ||||| ||||||||||| Sbjct: 44206 tgaccaacctgattatgt 44189
>gb|AC122164.6| Medicago truncatula clone mth2-24h4, complete sequence Length = 112428 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 258 aaagcgattgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcct 317 |||| ||| |||||||||||||| ||| ||||||| |||||||||||||| ||||| ||| Sbjct: 54505 aaagtgatcgagaagcatgctgcacagctctgtgttcttgctgaggattgtgaccaacct 54446 Query: 318 gatta 322 ||||| Sbjct: 54445 gatta 54441
>gb|AC153003.14| Medicago truncatula clone mth2-96o5, complete sequence Length = 93881 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 288 tgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgt 347 ||||| ||||| || ||||| ||||||||||| ||||| || ||||||||||| || ||| Sbjct: 18467 tgtgttcttgcagaagattgtgaccagcctgactatgttaaacttgtcaaggctctttgt 18408 Query: 348 gctgagcacaa 358 ||||||||||| Sbjct: 18407 gctgagcacaa 18397
>gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D22 map TEn5, complete sequence Length = 103194 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 410 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 469 ||||||||||||||| ||||||||||| ||||| ||||| || || ||||||||| |||| Sbjct: 49936 gctttgcaagattgattctgagggcaatgcaaggaaggttgttggatgctcatgtctcgt 49995 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 264 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 323 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 49702 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 49761 Query: 324 gtgaagcttgt 334 || |||||||| Sbjct: 49762 gtcaagcttgt 49772
>gb|AC010924.2|T24D18 Arabidopsis thaliana chromosome 1 BAC T24D18 sequence, complete sequence Length = 80442 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 297 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctga 352 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| Sbjct: 7536 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctga 7591 Score = 40.1 bits (20), Expect = 7.4 Identities = 53/64 (82%) Strand = Plus / Plus Query: 414 tgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtg 473 ||||||||||| |||||||| || || || ||||| || || ||||||||| | ||||| Sbjct: 7774 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 7833 Query: 474 aagg 477 |||| Sbjct: 7834 aagg 7837
>gb|BT012865.1| Lycopersicon esculentum clone 113957F, mRNA sequence Length = 749 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 378 cctagtgccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaa 436 |||| |||||| || ||||| || |||||||| || ||||||||||||||||| ||||| Sbjct: 337 cctaatgccaagacacttggtgaatgggctggtctgtgcaagattgactctgaaggcaa 395
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 435 aaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaagg 477 ||||| ||| ||||||| ||||||||||||||||| ||||||| Sbjct: 32277172 aaggctagagaggtggtcggctgctcatgtgtcgtcgtgaagg 32277214 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 218 tgctcatgatggccttgtcaagggactccgtga 250 ||||||||||| |||||||||||| |||||||| Sbjct: 32274991 tgctcatgatgaccttgtcaagggtctccgtga 32275023 Score = 48.1 bits (24), Expect = 0.030 Identities = 42/48 (87%) Strand = Plus / Plus Query: 363 cacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctggg 410 ||||||||||| || |||||| | | |||||||||||| ||||||||| Sbjct: 32276897 cacttggtcactgttcctagtacaagaactcttggcgaatgggctggg 32276944
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 435 aaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaagg 477 ||||| ||| ||||||| ||||||||||||||||| ||||||| Sbjct: 10939 aaggctagagaggtggtcggctgctcatgtgtcgtcgtgaagg 10981 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 218 tgctcatgatggccttgtcaagggactccgtga 250 ||||||||||| |||||||||||| |||||||| Sbjct: 8760 tgctcatgatgaccttgtcaagggtctccgtga 8792 Score = 48.1 bits (24), Expect = 0.030 Identities = 42/48 (87%) Strand = Plus / Plus Query: 363 cacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctggg 410 ||||||||||| || |||||| | | |||||||||||| ||||||||| Sbjct: 10664 cacttggtcactgttcctagtacaagaactcttggcgaatgggctggg 10711
>gb|AC091123.4| Oryza sativa chromosome 3 BAC OSJNBb0093E13 genomic sequence, complete sequence Length = 129778 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 435 aaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaagg 477 ||||| ||| ||||||| ||||||||||||||||| ||||||| Sbjct: 128844 aaggctagagaggtggtcggctgctcatgtgtcgtcgtgaagg 128886 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 218 tgctcatgatggccttgtcaagggactccgtga 250 ||||||||||| |||||||||||| |||||||| Sbjct: 126665 tgctcatgatgaccttgtcaagggtctccgtga 126697 Score = 48.1 bits (24), Expect = 0.030 Identities = 42/48 (87%) Strand = Plus / Plus Query: 363 cacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctggg 410 ||||||||||| || |||||| | | |||||||||||| ||||||||| Sbjct: 128569 cacttggtcactgttcctagtacaagaactcttggcgaatgggctggg 128616
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 435 aaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaagg 477 ||||| ||| ||||||| ||||||||||||||||| ||||||| Sbjct: 32367682 aaggctagagaggtggtcggctgctcatgtgtcgtcgtgaagg 32367724 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 218 tgctcatgatggccttgtcaagggactccgtga 250 ||||||||||| |||||||||||| |||||||| Sbjct: 32365503 tgctcatgatgaccttgtcaagggtctccgtga 32365535 Score = 48.1 bits (24), Expect = 0.030 Identities = 42/48 (87%) Strand = Plus / Plus Query: 363 cacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctggg 410 ||||||||||| || |||||| | | |||||||||||| ||||||||| Sbjct: 32367407 cacttggtcactgttcctagtacaagaactcttggcgaatgggctggg 32367454
>gb|AY245452.1| Dermacentor variabilis 40S ribosomal protein S12 mRNA, complete cds Length = 607 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Plus Query: 393 cttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtg 452 |||||||||||||| || || |||||||| ||| || |||||||| || || ||||| Sbjct: 319 cttggcgagtgggccggcctctgcaagatcgacaaggaaggcaaggcgaggaaagtggtc 378 Query: 453 ggctgctcatgtgtcgttgtgaaggacta 481 |||||| |||||||| ||||||||||| Sbjct: 379 ggctgcagttgtgtcgtggtgaaggacta 407
>gb|AC158631.6| Mus musculus 10 BAC RP23-424I1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206425 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 421 ttgactctgagggcaaggcaagaaagg 447 |||||||||||| |||||||||||||| Sbjct: 166816 ttgactctgaggccaaggcaagaaagg 166842
>gb|AC155325.5| Mus musculus 10 BAC RP24-86C24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 171402 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 421 ttgactctgagggcaaggcaagaaagg 447 |||||||||||| |||||||||||||| Sbjct: 149471 ttgactctgaggccaaggcaagaaagg 149497
>dbj|AK147335.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1014L18 product:Very KIND protein (Fragment), full insert sequence Length = 7300 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 421 ttgactctgagggcaaggcaag 442 |||||||||||||||||||||| Sbjct: 2626 ttgactctgagggcaaggcaag 2605
>dbj|AK147693.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1108L06 product:Very KIND protein (Fragment), full insert sequence Length = 6954 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 421 ttgactctgagggcaaggcaag 442 |||||||||||||||||||||| Sbjct: 2279 ttgactctgagggcaaggcaag 2258
>dbj|AK147672.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1106C24 product:Very KIND protein (Fragment), full insert sequence Length = 7026 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 421 ttgactctgagggcaaggcaag 442 |||||||||||||||||||||| Sbjct: 2352 ttgactctgagggcaaggcaag 2331
>dbj|AK046817.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN full-length enriched library, clone:B830014K08 product:Very KIND protein (Fragment) homolog [Mus musculus], full insert sequence Length = 3667 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 421 ttgactctgagggcaaggcaag 442 |||||||||||||||||||||| Sbjct: 2362 ttgactctgagggcaaggcaag 2341
>ref|NM_177261.3| Mus musculus kinase non-catalytic C-lobe domain (KIND) containing 1 (Kndc1), mRNA Length = 7175 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 421 ttgactctgagggcaaggcaag 442 |||||||||||||||||||||| Sbjct: 2483 ttgactctgagggcaaggcaag 2462
>gb|AC107822.18| Mus musculus chromosome 7, clone RP23-182C11, complete sequence Length = 220443 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 421 ttgactctgagggcaaggcaag 442 |||||||||||||||||||||| Sbjct: 125647 ttgactctgagggcaaggcaag 125626
>emb|AJ580324.2|MMU580324 Mus musculus mRNA for Very KIND protein (VKIND gene) Length = 5229 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 421 ttgactctgagggcaaggcaag 442 |||||||||||||||||||||| Sbjct: 2134 ttgactctgagggcaaggcaag 2113
>emb|CR847821.11| Zebrafish DNA sequence from clone DKEY-87I10 in linkage group 14, complete sequence Length = 167652 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 ttgatgactgctctgcagctt 200 ||||||||||||||||||||| Sbjct: 159631 ttgatgactgctctgcagctt 159651
>emb|AL358933.15| Human DNA sequence from clone RP1-265C24 on chromosome 6 Contains the ZNF192 gene for zinc finger protein 192 (LD5-1), the gene for a novel SCAN box protein, the 5' end of a novel gene, ESTs, STSs, GSSs and two CpG islands, complete sequence Length = 55480 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 tccctccgtcccccaacagatctac 64 |||||||| |||||||||||||||| Sbjct: 13391 tccctccgccccccaacagatctac 13415
>gb|AC010063.7| Drosophila melanogaster 3L BAC RP98-16A3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194006 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 tgcaaaagcgattgagaagca 274 ||||||||||||||||||||| Sbjct: 81627 tgcaaaagcgattgagaagca 81607
>gb|AC093371.6| Genomic sequence for Mus musculus, clone RP23-36P10, complete sequence Length = 177872 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 caaggcaagaaaggtggtggg 454 ||||||||||||||||||||| Sbjct: 146770 caaggcaagaaaggtggtggg 146790
>gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 of 83 of the complete sequence Length = 315108 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 tgcaaaagcgattgagaagca 274 ||||||||||||||||||||| Sbjct: 150268 tgcaaaagcgattgagaagca 150288
>gb|AC130658.36| Mus musculus chromosome 1, clone RP23-309D5, complete sequence Length = 184094 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 gtgggctgggctttgcaaga 420 |||||||||||||||||||| Sbjct: 28659 gtgggctgggctttgcaaga 28678
>gb|BC099694.1| Mus musculus RIKEN cDNA 4831426I19 gene, mRNA (cDNA clone MGC:106312 IMAGE:4507746), complete cds Length = 3370 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 cagcttgtgatgaagaagtc 214 |||||||||||||||||||| Sbjct: 2423 cagcttgtgatgaagaagtc 2442
>gb|AC147375.3| Mus musculus BAC clone RP24-159O13 from chromosome 12, complete sequence Length = 176510 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 cagcttgtgatgaagaagtc 214 |||||||||||||||||||| Sbjct: 161616 cagcttgtgatgaagaagtc 161597
>ref|XM_983651.1| PREDICTED: Mus musculus RIKEN cDNA 4831426I19 gene, transcript variant 2 (4831426I19Rik), mRNA Length = 3341 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 cagcttgtgatgaagaagtc 214 |||||||||||||||||||| Sbjct: 2194 cagcttgtgatgaagaagtc 2213
>gb|AC126933.3| Mus musculus BAC clone RP24-117M7 from chromosome 1, complete sequence Length = 170885 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 gactctgagggcaaggcaagaaag 446 ||||||||||| |||||||||||| Sbjct: 129232 gactctgaggggaaggcaagaaag 129255
>gb|AC124383.3| Mus musculus BAC clone RP24-411E14 from chromosome 18, complete sequence Length = 175177 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 gagggcaaggcaagaaaggt 448 |||||||||||||||||||| Sbjct: 16688 gagggcaaggcaagaaaggt 16707
>gb|AC024859.1| Caenorhabditis elegans cosmid Y71H2AM, complete sequence Length = 143786 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 tatggtgaagattcggaggg 499 |||||||||||||||||||| Sbjct: 21060 tatggtgaagattcggaggg 21079
>emb|AL080314.29|HSDJ60O19 Human DNA sequence from clone RP1-60O19 on chromosome 6q16.2-21 Contains two novel genes (including FLJ22314), complete sequence Length = 161355 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cctagtgccaaaactcttgg 397 |||||||||||||||||||| Sbjct: 73353 cctagtgccaaaactcttgg 73372
>gb|AC165083.2| Mus musculus BAC clone RP23-411I6 from chromosome 18, complete sequence Length = 208109 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 gagggcaaggcaagaaaggt 448 |||||||||||||||||||| Sbjct: 156537 gagggcaaggcaagaaaggt 156556
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence Length = 3354505 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gcttgctgaggattgcgacc 312 |||||||||||||||||||| Sbjct: 756170 gcttgctgaggattgcgacc 756151
>ref|NM_172500.1| Mus musculus RIKEN cDNA 4831426I19 gene (4831426I19Rik), mRNA Length = 5069 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 cagcttgtgatgaagaagtc 214 |||||||||||||||||||| Sbjct: 2070 cagcttgtgatgaagaagtc 2089
>dbj|AK029216.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4831426I19 product:hypothetical Spectrin repeat containing protein, full insert sequence Length = 5069 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 cagcttgtgatgaagaagtc 214 |||||||||||||||||||| Sbjct: 2070 cagcttgtgatgaagaagtc 2089
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 510 gtgcaggaatacgtcaagtcgcac 533 |||||||| ||||||||||||||| Sbjct: 3718687 gtgcaggactacgtcaagtcgcac 3718664
>ref|NM_065204.2| Caenorhabditis elegans Y71H2AM.10 (Y71H2AM.10) mRNA, complete cds Length = 2739 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 tatggtgaagattcggaggg 499 |||||||||||||||||||| Sbjct: 963 tatggtgaagattcggaggg 944
>dbj|AK030542.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330429E21 product:hypothetical protein, full insert sequence Length = 3080 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 cagcttgtgatgaagaagtc 214 |||||||||||||||||||| Sbjct: 61 cagcttgtgatgaagaagtc 80
>ref|XM_234584.3| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 4831426I19 (predicted) (LOC299356), mRNA Length = 3471 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 cagcttgtgatgaagaagtc 214 |||||||||||||||||||| Sbjct: 2368 cagcttgtgatgaagaagtc 2387
>ref|XM_233076.2| PREDICTED: Rattus norvegicus similar to ribosomal protein S12 (LOC313283), mRNA Length = 424 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 aggcactctgtgctgagcac 356 |||||||||||||||||||| Sbjct: 208 aggcactctgtgctgagcac 227
>emb|CR548627.7| Zebrafish DNA sequence from clone DKEYP-24A7 in linkage group 19, complete sequence Length = 146348 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tgatgactgctctgcagctt 200 |||||||||||||||||||| Sbjct: 112167 tgatgactgctctgcagctt 112148
>gb|AC132400.3| Mus musculus BAC clone RP23-400A19 from 1, complete sequence Length = 218935 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 gactctgagggcaaggcaagaaag 446 ||||||||||| |||||||||||| Sbjct: 35225 gactctgaggggaaggcaagaaag 35248
>gb|U94500.1|TNU94500 Tilapia nilotica ribosomal protein S12 mRNA, complete cds Length = 468 Score = 40.1 bits (20), Expect = 7.4 Identities = 74/92 (80%) Strand = Plus / Plus Query: 393 cttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtg 452 ||||| ||||||| ||| || |||||||| ||| |||||| || || | ||||||||| Sbjct: 288 cttggtgagtgggttggtctgtgcaagatcgaccgtgagggtaaaccacgcaaggtggtg 347 Query: 453 ggctgctcatgtgtcgttgtgaaggactatgg 484 |||||| || |||||||| ||||| ||||| Sbjct: 348 ggctgcagctgcgtcgttgttaaggattatgg 379 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,801,749 Number of Sequences: 3902068 Number of extensions: 3801749 Number of successful extensions: 64414 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 64174 Number of HSP's gapped (non-prelim): 239 length of query: 547 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 524 effective length of database: 17,143,297,704 effective search space: 8983087996896 effective search space used: 8983087996896 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
