ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags36p08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X94296.1|HVRL24E H.vulgare mRNA for L24 ribosomal protein Length = 708 Score = 1314 bits (663), Expect = 0.0 Identities = 670/671 (99%), Gaps = 1/671 (0%) Strand = Plus / Plus Query: 2 gtgaaagttctccaaggnctgagaagatggttctgaagactgagctttgccgttttagcg 61 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 39 gtgaaagttctccaagg-ctgagaagatggttctgaagactgagctttgccgttttagcg 97 Query: 62 gccagaagatttacccagggaagggtatcaggttcattcgttcagattcacaggttttcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98 gccagaagatttacccagggaagggtatcaggttcattcgttcagattcacaggttttcc 157 Query: 122 tctttgccaactcaaaatgcaagcgctacttccacaaccgcctgaagcctgcaaagcttt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 158 tctttgccaactcaaaatgcaagcgctacttccacaaccgcctgaagcctgcaaagcttt 217 Query: 182 gctggacagcaatgtacaggaagcagcacaagaaggacatccatgctgaggctgccaaga 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 218 gctggacagcaatgtacaggaagcagcacaagaaggacatccatgctgaggctgccaaga 277 Query: 242 agaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacactggaag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 278 agaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacactggaag 337 Query: 302 ttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagccgctc 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 338 ttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagccgctc 397 Query: 362 ttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 398 ttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcag 457 Query: 422 aggtgaccaagtcccagaagtcacaggggggcaagggtgccgtgcagaagggttccaagg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 458 aggtgaccaagtcccagaagtcacaggggggcaagggtgccgtgcagaagggttccaagg 517 Query: 482 gcccaaagcttggcggtggcggcggcaagcgttgaaagtcgattacatcatagacataga 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 518 gcccaaagcttggcggtggcggcggcaagcgttgaaagtcgattacatcatagacataga 577 Query: 542 gttgtgctgcctagccttgtttcttatcctatcctactatcatagacctttctcaagtta 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 gttgtgctgcctagccttgtttcttatcctatcctactatcatagacctttctcaagtta 637 Query: 602 ccttgccctcttgaatttgcaccttttctgtgaggctgaatggtcttaacgttttggatt 661 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 ccttgccctcttgaatttgcaccttttctgtgaggctgaatggtcttaacgttttggatt 697 Query: 662 gtctcgatgag 672 ||||||||||| Sbjct: 698 gtctcgatgag 708
>dbj|AK101927.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071P12, full insert sequence Length = 843 Score = 547 bits (276), Expect = e-152 Identities = 390/428 (91%) Strand = Plus / Plus Query: 20 ctgagaagatggttctgaagactgagctttgccgttttagcggccagaagatttacccag 79 |||| |||||||||||||||||||| |||||||||||||| || |||||||| ||||||| Sbjct: 79 ctgaaaagatggttctgaagactgaactttgccgttttagtgggcagaagatatacccag 138 Query: 80 ggaagggtatcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaat 139 | ||||||||||||||||||||| | ||||| |||||||| || ||||||||||| |||| Sbjct: 139 gcaagggtatcaggttcattcgtgctgattcccaggtttttctgtttgccaactcgaaat 198 Query: 140 gcaagcgctacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtaca 199 |||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||| Sbjct: 199 gcaagcgctacttccacaaccgcctgaagcctgccaagcttacctggacagctatgtaca 258 Query: 200 ggaagcagcacaagaaggacatccatgctgaggctgccaagaagaggcgccgcaccacca 259 |||||||||||||||||||||| |||||||| |||| |||||||||||| |||||||||| Sbjct: 259 ggaagcagcacaagaaggacattcatgctgaagctgtcaagaagaggcgtcgcaccacca 318 Query: 260 agaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagaggg 319 ||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||||||| Sbjct: 319 agaagccatactcacggtcaattgttggtgctacactggaagttatccaaaagaagagga 378 Query: 320 ctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggagc 379 |||||| ||||||||||||||||| ||||||||||| ||||| |||||||||||||||| Sbjct: 379 gtgagaaacctgaagtccgtgatgcagccagagaagcggctctccgtgagatcaaggagc 438 Query: 380 gcatcaagaagaccaaggatgagaagaaggccaagaaggcagaggtgaccaagtcccaga 439 |||||||||| |||||||||||||| ||||| ||||||||||||||| | || || |||| Sbjct: 439 gcatcaagaaaaccaaggatgagaaaaaggcaaagaaggcagaggtggcaaaatctcaga 498 Query: 440 agtcacag 447 || ||||| Sbjct: 499 agacacag 506
>dbj|AK058612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-A11, full insert sequence Length = 781 Score = 547 bits (276), Expect = e-152 Identities = 390/428 (91%) Strand = Plus / Plus Query: 20 ctgagaagatggttctgaagactgagctttgccgttttagcggccagaagatttacccag 79 |||| |||||||||||||||||||| |||||||||||||| || |||||||| ||||||| Sbjct: 78 ctgaaaagatggttctgaagactgaactttgccgttttagtgggcagaagatatacccag 137 Query: 80 ggaagggtatcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaat 139 | ||||||||||||||||||||| | ||||| |||||||| || ||||||||||| |||| Sbjct: 138 gcaagggtatcaggttcattcgtgctgattcccaggtttttctgtttgccaactcgaaat 197 Query: 140 gcaagcgctacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtaca 199 |||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||| Sbjct: 198 gcaagcgctacttccacaaccgcctgaagcctgccaagcttacctggacagctatgtaca 257 Query: 200 ggaagcagcacaagaaggacatccatgctgaggctgccaagaagaggcgccgcaccacca 259 |||||||||||||||||||||| |||||||| |||| |||||||||||| |||||||||| Sbjct: 258 ggaagcagcacaagaaggacattcatgctgaagctgtcaagaagaggcgtcgcaccacca 317 Query: 260 agaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagaggg 319 ||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||||||| Sbjct: 318 agaagccatactcacggtcaattgttggtgctacactggaagttatccaaaagaagagga 377 Query: 320 ctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggagc 379 |||||| ||||||||||||||||| ||||||||||| ||||| |||||||||||||||| Sbjct: 378 gtgagaaacctgaagtccgtgatgcagccagagaagcggctctccgtgagatcaaggagc 437 Query: 380 gcatcaagaagaccaaggatgagaagaaggccaagaaggcagaggtgaccaagtcccaga 439 |||||||||| |||||||||||||| ||||| ||||||||||||||| | || || |||| Sbjct: 438 gcatcaagaaaaccaaggatgagaaaaaggcaaagaaggcagaggtggcaaaatctcaga 497 Query: 440 agtcacag 447 || ||||| Sbjct: 498 agacacag 505
>dbj|AK059430.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-F02, full insert sequence Length = 779 Score = 523 bits (264), Expect = e-145 Identities = 440/498 (88%), Gaps = 3/498 (0%) Strand = Plus / Plus Query: 20 ctgagaagatggttctgaagactgagctttgccgttttagcggccagaagatttacccag 79 ||||||||||||| |||||||| ||||||||||||||||| ||||||||||| || |||| Sbjct: 90 ctgagaagatggtgctgaagacagagctttgccgttttagtggccagaagatatatccag 149 Query: 80 ggaagggtatcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaat 139 ||||||| || | || |||||| | ||||||||||| ||||| ||||| |||||||||| Sbjct: 150 ggaagggcattcgctttattcgtgctgattcacaggtcttcctttttgcaaactcaaaat 209 Query: 140 gcaagcgctacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtaca 199 ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 210 gcaagcgctacttccacaaccgcctgaagcctgcaaagcttacctggacagccatgtaca 269 Query: 200 ggaagcagcacaagaaggacatccatgctgaggctgccaagaagaggcgccgcaccacca 259 ||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||| Sbjct: 270 ggaagcagcacaagaaggatatccatgctgaagctgtcaagaagaggcgccgcaccacca 329 Query: 260 agaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagaggg 319 ||||||| ||||| |||| ||||||||||| | ||||||| ||||| |||||||| | Sbjct: 330 agaagccatactctaggtcaattgttggtgcttcgttggaagtcatccaaaagaagagag 389 Query: 320 ctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggagc 379 |||| ||||||||||| ||||||||||| |||||||| |||||||||||||||||||| | Sbjct: 390 ctgaaaagcctgaagttcgtgatgctgctagagaagctgctcttcgtgagatcaaggaac 449 Query: 380 gcatcaagaagaccaaggatgagaagaaggccaagaaggcagaggtgaccaagtcccaga 439 |||||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||||| Sbjct: 450 gcatcaagaagaccaaggatgaaaagaaggcgaagaaggctgaggtaaccaagtcccaga 509 Query: 440 agtcacaggggggcaagggtgccgtgcagaagggttccaagggcccaaagcttggcggtg 499 |||| ||| | |||||||||| | || ||||||||||||||| ||| |||| |||| Sbjct: 510 agtcgcagtcg---aagggtgccgccccgaggggttccaagggcccgaagattggtggtg 566 Query: 500 gcggcggcaagcgttgaa 517 | || || ||||| |||| Sbjct: 567 gtggtggaaagcgctgaa 584
>gb|BT018224.1| Zea mays clone EL01N0561E06.c mRNA sequence Length = 767 Score = 511 bits (258), Expect = e-142 Identities = 440/500 (88%), Gaps = 3/500 (0%) Strand = Plus / Plus Query: 20 ctgagaagatggttctgaagactgagctttgccgttttagcggccagaagatttacccag 79 ||||||||||||| |||||||| || || ||||| || ||||||||||||||||| || | Sbjct: 93 ctgagaagatggtgctgaagacagaactctgccgcttcagcggccagaagatttatcctg 152 Query: 80 ggaagggtatcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaat 139 |||| || ||| | || || ||| | ||||| ||||||||||| |||||||||||||||| Sbjct: 153 ggaaaggcatccgatttatccgtgctgattctcaggttttcctttttgccaactcaaaat 212 Query: 140 gcaagcgctacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtaca 199 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 213 gcaagcgctacttccacaaccgcctgaagcctgcaaagcttacctggacagcaatgtaca 272 Query: 200 ggaagcagcacaagaaggacatccatgctgaggctgccaagaagaggcgccgcaccacca 259 ||||||||| ||||||||| |||||||||||||||| |||||||||||||||| |||||| Sbjct: 273 ggaagcagcccaagaaggatatccatgctgaggctgtcaagaagaggcgccgcgccacca 332 Query: 260 agaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagaggg 319 ||||||| ||||| |||| ||||| ||||| | || || || |||||||| ||||||| Sbjct: 333 agaagccatactcgaggtccattgtgggtgcttccctagaggtgatccagaaaaagaggg 392 Query: 320 ctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggagc 379 |||||||||| || ||||| |||||||| |||||||| |||||||| ||||||||||||| Sbjct: 393 ctgagaagcccgaggtccgcgatgctgctagagaagctgctcttcgcgagatcaaggagc 452 Query: 380 gcatcaagaagaccaaggatgagaagaaggccaagaaggcagaggtgaccaagtcccaga 439 ||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||| Sbjct: 453 gcatcaagaagaccaaggatgagaagaaggcgaaaaaggctgaggtgaccaagtcccaga 512 Query: 440 agtcacaggggggcaagggtgccgtgcagaagggttccaagggcccaaagcttggcggtg 499 || ||||| | ||||| || || |||||||||||||||||||| ||| | || |||| Sbjct: 513 aggcacagacg---aagggagcggtccagaagggttccaagggccccaagttgggtggtg 569 Query: 500 gcggcggcaagcgttgaaag 519 |||| |||||||| |||||| Sbjct: 570 gcggtggcaagcgctgaaag 589
>ref|XM_475453.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 486 Score = 505 bits (255), Expect = e-140 Identities = 419/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 28 atggttctgaagactgagctttgccgttttagcggccagaagatttacccagggaagggt 87 ||||| |||||||| ||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 1 atggtgctgaagacagagctttgccgttttagtggccagaagatatatccagggaagggc 60 Query: 88 atcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaatgcaagcgc 147 || | || |||||| | ||||||||||| ||||| ||||| |||||||||||||||||| Sbjct: 61 attcgctttattcgtgctgattcacaggtcttcctttttgcaaactcaaaatgcaagcgc 120 Query: 148 tacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtacaggaagcag 207 ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 121 tacttccacaaccgcctgaagcctgcaaagcttacctggacagccatgtacaggaagcag 180 Query: 208 cacaagaaggacatccatgctgaggctgccaagaagaggcgccgcaccaccaagaagccg 267 ||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 181 cacaagaaggatatccatgctgaagctgtcaagaagaggcgccgcaccaccaagaagcca 240 Query: 268 tactcacggtcgattgttggtgccacactggaagttatccagaagaagagggctgagaag 327 ||||| |||| ||||||||||| | ||||||| ||||| |||||||| ||||| ||| Sbjct: 241 tactctaggtcaattgttggtgcttcgttggaagtcatccaaaagaagagagctgaaaag 300 Query: 328 cctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggagcgcatcaag 387 |||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 301 cctgaagttcgtgatgctgctagagaagctgctcttcgtgagatcaaggaacgcatcaag 360 Query: 388 aagaccaaggatgagaagaaggccaagaaggcagaggtgaccaagtcccagaagtcacag 447 |||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||| ||| Sbjct: 361 aagaccaaggatgaaaagaaggcgaagaaggctgaggtaaccaagtcccagaagtcgcag 420 Query: 448 gggggcaagggtgccgtgcagaagggttccaagggcccaaagcttggcggtgg 500 | |||||||||| | || ||||||||||||||| ||| |||| ||||| Sbjct: 421 tcg---aagggtgccgccccgaggggttccaagggcccgaagattggtggtgg 470
>gb|BT016791.1| Zea mays clone Contig624 mRNA sequence Length = 772 Score = 494 bits (249), Expect = e-136 Identities = 437/499 (87%), Gaps = 3/499 (0%) Strand = Plus / Plus Query: 20 ctgagaagatggttctgaagactgagctttgccgttttagcggccagaagatttacccag 79 ||||||||||||| || | || || || ||||| || || ||||||||||| || || | Sbjct: 98 ctgagaagatggtgcttatcacggaactctgccgcttcagtggccagaagatctatcctg 157 Query: 80 ggaagggtatcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaat 139 |||| || ||| |||| |||||| | ||||| ||||||||||| ||||||||||| |||| Sbjct: 158 ggaaaggcatccggtttattcgtgctgattctcaggttttcctttttgccaactctaaat 217 Query: 140 gcaagcgctacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtaca 199 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 218 gcaagcgctacttccacaaccgcctgaagcctgcaaagcttacctggacagcaatgtaca 277 Query: 200 ggaagcagcacaagaaggacatccatgctgaggctgccaagaagaggcgccgcaccacca 259 ||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||| Sbjct: 278 ggaagcagcacaagaaggacatccatgctgaagctgtcaagaagaggcgccgcgccacca 337 Query: 260 agaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagaggg 319 ||||||||||||| |||| ||||| ||||| | ||||||| |||||||||||||| | Sbjct: 338 agaagccgtactcgaggtccattgtgggtgcttccttggaagtgatccagaagaagagag 397 Query: 320 ctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggagc 379 ||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 398 ctgagaagcctgaggtccgtgatgctgctagagaagctgctcttcgtgagatcaaggagc 457 Query: 380 gcatcaagaagaccaaggatgagaagaaggccaagaaggcagaggtgaccaagtcccaga 439 ||||||||||||||||||| ||||||||||| |||||||| |||||| |||||||||||| Sbjct: 458 gcatcaagaagaccaaggacgagaagaaggcgaagaaggctgaggtgtccaagtcccaga 517 Query: 440 agtcacaggggggcaagggtgccgtgcagaagggttccaagggcccaaagcttggcggtg 499 || | ||| | ||||| || || ||||| |||||||||||||| ||| | ||||| | Sbjct: 518 aggcgcagacg---aagggcgctgtccagaaaggttccaagggccccaagttgggcggcg 574 Query: 500 gcggcggcaagcgttgaaa 518 |||| ||||| || ||||| Sbjct: 575 gcggtggcaaacgctgaaa 593
>gb|BT016435.1| Zea mays clone Contig268 mRNA sequence Length = 793 Score = 464 bits (234), Expect = e-127 Identities = 434/500 (86%), Gaps = 3/500 (0%) Strand = Plus / Plus Query: 20 ctgagaagatggttctgaagactgagctttgccgttttagcggccagaagatttacccag 79 ||||||| ||||| |||||||| || |||||||| || ||||||||||||||||| || | Sbjct: 106 ctgagaacatggtgctgaagacggaactttgccgcttcagcggccagaagatttatcctg 165 Query: 80 ggaagggtatcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaat 139 |||| || || || || || ||| | ||||| ||||| ||||| ||||||||||| |||| Sbjct: 166 ggaaaggcattagatttatccgtgctgattctcaggtcttcctttttgccaactcgaaat 225 Query: 140 gcaagcgctacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtaca 199 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 226 gcaagcgctacttccacaaccgcctgaagcctgcaaagcttacctggacagcaatgtaca 285 Query: 200 ggaagcagcacaagaaggacatccatgctgaggctgccaagaagaggcgccgcaccacca 259 ||||||||||||||||||| ||||||||||| || | ||||||||||||||| |||||| Sbjct: 286 ggaagcagcacaagaaggatatccatgctgaagcggtaaagaagaggcgccgcgccacca 345 Query: 260 agaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagaggg 319 ||||||| ||||| |||| ||||| ||||| | ||||||| |||||||||||||| | Sbjct: 346 agaagccatactccaggtcaattgtgggtgcttccttggaagtaatccagaagaagagag 405 Query: 320 ctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggagc 379 |||||||||| || ||||| |||||||| |||||||| |||||||||||||||||||||| Sbjct: 406 ctgagaagccagaggtccgcgatgctgctagagaagctgctcttcgtgagatcaaggagc 465 Query: 380 gcatcaagaagaccaaggatgagaagaaggccaagaaggcagaggtgaccaagtcccaga 439 |||||||||||||||||||||||||||| || |||||||| ||||||| ||||||||||| Sbjct: 466 gcatcaagaagaccaaggatgagaagaaagcgaagaaggcggaggtgagcaagtcccaga 525 Query: 440 agtcacaggggggcaagggtgccgtgcagaagggttccaagggcccaaagcttggcggtg 499 || | || | |||||||| || |||||||||||||||||||| ||| | ||||| | Sbjct: 526 agacgca---gacaaagggtgcggtccagaagggttccaagggccccaagttgggcggcg 582 Query: 500 gcggcggcaagcgttgaaag 519 | || || ||||| |||||| Sbjct: 583 gtggtgggaagcgctgaaag 602
>gb|BT017947.1| Zea mays clone EL01N0521F01.c mRNA sequence Length = 859 Score = 464 bits (234), Expect = e-127 Identities = 434/500 (86%), Gaps = 3/500 (0%) Strand = Plus / Plus Query: 20 ctgagaagatggttctgaagactgagctttgccgttttagcggccagaagatttacccag 79 ||||||| ||||| |||||||| || |||||||| || ||||||||||||||||| || | Sbjct: 160 ctgagaacatggtgctgaagacggaactttgccgcttcagcggccagaagatttatcctg 219 Query: 80 ggaagggtatcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaat 139 |||| || || || || || ||| | ||||| ||||| ||||| ||||||||||| |||| Sbjct: 220 ggaaaggcattagatttatccgtgctgattctcaggtcttcctttttgccaactcgaaat 279 Query: 140 gcaagcgctacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtaca 199 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 280 gcaagcgctacttccacaaccgcctgaagcctgcaaagcttacctggacagcaatgtaca 339 Query: 200 ggaagcagcacaagaaggacatccatgctgaggctgccaagaagaggcgccgcaccacca 259 ||||||||||||||||||| ||||||||||| || | ||||||||||||||| |||||| Sbjct: 340 ggaagcagcacaagaaggatatccatgctgaagcggtaaagaagaggcgccgcgccacca 399 Query: 260 agaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagaggg 319 ||||||| ||||| |||| ||||| ||||| | ||||||| |||||||||||||| | Sbjct: 400 agaagccatactccaggtcaattgtgggtgcttccttggaagtaatccagaagaagagag 459 Query: 320 ctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggagc 379 |||||||||| || ||||| |||||||| |||||||| |||||||||||||||||||||| Sbjct: 460 ctgagaagccagaggtccgcgatgctgctagagaagctgctcttcgtgagatcaaggagc 519 Query: 380 gcatcaagaagaccaaggatgagaagaaggccaagaaggcagaggtgaccaagtcccaga 439 |||||||||||||||||||||||||||| || |||||||| ||||||| ||||||||||| Sbjct: 520 gcatcaagaagaccaaggatgagaagaaagcgaagaaggcggaggtgagcaagtcccaga 579 Query: 440 agtcacaggggggcaagggtgccgtgcagaagggttccaagggcccaaagcttggcggtg 499 || | || | |||||||| || |||||||||||||||||||| ||| | ||||| | Sbjct: 580 agacgca---gacaaagggtgcggtccagaagggttccaagggccccaagttgggcggcg 636 Query: 500 gcggcggcaagcgttgaaag 519 | || || ||||| |||||| Sbjct: 637 gtggtgggaagcgctgaaag 656
>gb|AY109363.1| Zea mays CL303_3 mRNA sequence Length = 1436 Score = 460 bits (232), Expect = e-126 Identities = 431/500 (86%), Gaps = 3/500 (0%) Strand = Plus / Plus Query: 20 ctgagaagatggttctgaagactgagctttgccgttttagcggccagaagatttacccag 79 ||||||| ||||| |||||||| || |||||||| || ||||||||||||||||| || | Sbjct: 807 ctgagaacatggtgctgaagacggaactttgccgcttcagcggccagaagatttatcctg 866 Query: 80 ggaagggtatcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaat 139 |||| || || || || || ||| | ||||| |||||||||| ||||||||||||| Sbjct: 867 ggaaaggcattagatttatccgtgctgattctcaggttttccnnnnngccaactcaaaat 926 Query: 140 gcaagcgctacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtaca 199 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 927 gcaagcgctacttccacaaccgcctgaagcctgcaaagcttacctggacagcaatgtaca 986 Query: 200 ggaagcagcacaagaaggacatccatgctgaggctgccaagaagaggcgccgcaccacca 259 ||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||| || Sbjct: 987 ggaagcagcacaagaaggatatccatgctgaggctgtcaagaagaggcgccgcgccaaca 1046 Query: 260 agaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagaggg 319 ||||||| ||||| |||| ||||| ||||| | || || || |||||||||||||||| Sbjct: 1047 agaagccatactcgaggtccattgtgggtgcttccctagaggtgatccagaagaagaggg 1106 Query: 320 ctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggagc 379 |||||||||| || ||||| |||||||| |||||||| |||||||| ||||||||||||| Sbjct: 1107 ctgagaagcccgaggtccgcgatgctgctagagaagctgctcttcgcgagatcaaggagc 1166 Query: 380 gcatcaagaagaccaaggatgagaagaaggccaagaaggcagaggtgaccaagtcccaga 439 ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 1167 gcatcaagaagaccaaggatgagaagaaggcgnnnnnggctgaggtgaccaagtcccaga 1226 Query: 440 agtcacaggggggcaagggtgccgtgcagaagggttccaagggcccaaagcttggcggtg 499 || | ||| | ||||| || || |||||||||||||||||||| ||| | || || | Sbjct: 1227 aggcgcagacg---aagggagcggtccagaagggttccaagggccccaagttgggtggcg 1283 Query: 500 gcggcggcaagcgttgaaag 519 |||| |||||||| |||||| Sbjct: 1284 gcggtggcaagcgctgaaag 1303
>ref|NM_186639.1| Oryza sativa (japonica cultivar-group), mRNA Length = 483 Score = 365 bits (184), Expect = 1e-97 Identities = 334/384 (86%) Strand = Plus / Plus Query: 43 gagctttgccgttttagcggccagaagatttacccagggaagggtatcaggttcattcgt 102 ||||| |||||||| |||||| |||||||||||||||||||||||||| ||||| ||| Sbjct: 13 gagctgtgccgtttcagcggcgccaagatttacccagggaagggtatcagattcatccgt 72 Query: 103 tcagattcacaggttttcctctttgccaactcaaaatgcaagcgctacttccacaaccgc 162 |||| || ||||| ||||| ||| | ||||| || ||||||||||||||||||||||| Sbjct: 73 gcagactcccaggtgttcctgttttcaaactcgaagtgcaagcgctacttccacaaccgt 132 Query: 163 ctgaagcctgcaaagctttgctggacagcaatgtacaggaagcagcacaagaaggacatc 222 |||||||| || |||||| |||||||| |||||||| ||||||||||||||||| || Sbjct: 133 ctgaagccagccaagcttacatggacagccatgtacagaaagcagcacaagaaggatatt 192 Query: 223 catgctgaggctgccaagaagaggcgccgcaccaccaagaagccgtactcacggtcgatt 282 || || ||||| | ||||||||||||||||||||||||||| |||||||| ||||| || Sbjct: 193 cacgccgaggcagtcaagaagaggcgccgcaccaccaagaaaccgtactcccggtctata 252 Query: 283 gttggtgccacactggaagttatccagaagaagagggctgagaagcctgaagtccgtgat 342 |||||||| || || ||||| |||||||||||||| ||||||||||| || || |||||| Sbjct: 253 gttggtgctacccttgaagtcatccagaagaagagagctgagaagccagaggttcgtgat 312 Query: 343 gctgccagagaagccgctcttcgtgagatcaaggagcgcatcaagaagaccaaggatgag 402 || || || ||| ||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 313 gcagcaagggaatccgctcttcgtgagatcaaggagcgcatcaagaagacaaaggacgag 372 Query: 403 aagaaggccaagaaggcagaggtg 426 ||||| || ||||||||||||||| Sbjct: 373 aagaaagcgaagaaggcagaggtg 396
>gb|BT018227.1| Zea mays clone EL01N0561F11.c mRNA sequence Length = 1335 Score = 299 bits (151), Expect = 6e-78 Identities = 267/305 (87%), Gaps = 3/305 (0%) Strand = Plus / Plus Query: 215 aggacatccatgctgaggctgccaagaagaggcgccgcaccaccaagaagccgtactcac 274 |||| |||||||||||||||| |||||||||||||||| ||||||||||||| ||||| Sbjct: 810 aggatatccatgctgaggctgtcaagaagaggcgccgcgccaccaagaagccatactcga 869 Query: 275 ggtcgattgttggtgccacactggaagttatccagaagaagagggctgagaagcctgaag 334 |||| ||||| ||||| | || || || |||||||||||||||||||||||||| || | Sbjct: 870 ggtccattgtgggtgcttccctagaggtgatccagaagaagagggctgagaagcccgagg 929 Query: 335 tccgtgatgctgccagagaagccgctcttcgtgagatcaaggagcgcatcaagaagacca 394 |||| |||||||| |||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 930 tccgcgatgctgctagagaagctgctcttcgcgagatcaaggagcgcatcaagaagacca 989 Query: 395 aggatgagaagaaggccaagaaggcagaggtgaccaagtcccagaagtcacaggggggca 454 |||||||||||||||| || ||||| ||||||||||||||||||||| ||||| | | Sbjct: 990 aggatgagaagaaggcgaaaaaggctgaggtgaccaagtcccagaaggcacagacg---a 1046 Query: 455 agggtgccgtgcagaagggttccaagggcccaaagcttggcggtggcggcggcaagcgtt 514 |||| || || |||||||||||||||||||| ||| | || |||||||| |||||||| | Sbjct: 1047 agggagcggtccagaagggttccaagggccccaagttgggtggtggcggtggcaagcgct 1106 Query: 515 gaaag 519 ||||| Sbjct: 1107 gaaag 1111 Score = 226 bits (114), Expect = 8e-56 Identities = 177/198 (89%) Strand = Plus / Plus Query: 20 ctgagaagatggttctgaagactgagctttgccgttttagcggccagaagatttacccag 79 ||||||||||||| |||||||| || || ||||| || ||||||||||| ||||| || | Sbjct: 47 ctgagaagatggtgctgaagacagaactctgccgcttcagcggccagaacatttatcctg 106 Query: 80 ggaagggtatcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaat 139 |||| || ||| | || || ||| | ||||| ||||||||||| |||||||||||||||| Sbjct: 107 ggaaaggcatccgatttatccgtgctgattctcaggttttcctttttgccaactcaaaat 166 Query: 140 gcaagcgctacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtaca 199 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 167 gcaagcgctacttccacaaccgcctgaagcctgcaaagcttacctggacagcaatgtaca 226 Query: 200 ggaagcagcacaagaagg 217 |||||||||||||||||| Sbjct: 227 ggaagcagcacaagaagg 244
>gb|AF298827.1|AF298827 Prunus avium 60S ribosomal protein L24 (RL24) mRNA, complete cds Length = 690 Score = 276 bits (139), Expect = 9e-71 Identities = 331/395 (83%) Strand = Plus / Plus Query: 28 atggttctgaagactgagctttgccgttttagcggccagaagatttacccagggaagggt 87 |||||||| ||||| || || || ||||||||||| |||||||||||||| ||||| Sbjct: 49 atggttctcaagaccgaactctgtcgttttagcggggccaagatttacccaggaaagggc 108 Query: 88 atcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaatgcaagcgc 147 ||||| || |||||||| || || ||||| ||||| |||||||||||||||||||| | Sbjct: 109 atcagatttattcgttctgactctcaggtcttcctgtttgccaactcaaaatgcaaaagg 168 Query: 148 tacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtacaggaagcag 207 |||||||||||| | ||||||| |||||||| ||||||||| ||||||||||||||| Sbjct: 169 tacttccacaacaggttgaagccatcaaagcttacctggacagccatgtacaggaagcag 228 Query: 208 cacaagaaggacatccatgctgaggctgccaagaagaggcgccgcaccaccaagaagccg 267 ||||| ||||| || | || |||| ||||||||| | || |||||||||||||| Sbjct: 229 cacaaaaaggatattgctcaagaagctgtgaagaagaggagacgtaccaccaagaagcct 288 Query: 268 tactcacggtcgattgttggtgccacactggaagttatccagaagaagagggctgagaag 327 |||||| |||| ||||| ||||||||||| || ||||||||||||| ||| |||||||| Sbjct: 289 tactcaaggtctattgtgggtgccacactcgaggttatccagaagaggagaactgagaag 348 Query: 328 cctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggagcgcatcaag 387 || || || ||||||||||| || ||||| ||||| ||||| ||||||||| | |||||| Sbjct: 349 cccgaggttcgtgatgctgcaagggaagctgctctccgtgaaatcaaggagaggatcaag 408 Query: 388 aagaccaaggatgagaagaaggccaagaaggcaga 422 || ||||||||||| |||||||||||||||||||| Sbjct: 409 aaaaccaaggatgaaaagaaggccaagaaggcaga 443
>dbj|AK106230.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-B01, full insert sequence Length = 2034 Score = 256 bits (129), Expect = 9e-65 Identities = 186/205 (90%) Strand = Plus / Plus Query: 20 ctgagaagatggttctgaagactgagctttgccgttttagcggccagaagatttacccag 79 ||||||||||||| |||||||| ||||||||||||||||| ||||||||||| || |||| Sbjct: 89 ctgagaagatggtgctgaagacagagctttgccgttttagtggccagaagatatatccag 148 Query: 80 ggaagggtatcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaat 139 ||||||| || | || |||||| | ||||||||||| ||||| ||||| |||||||||| Sbjct: 149 ggaagggcattcgctttattcgtgctgattcacaggtcttcctttttgcaaactcaaaat 208 Query: 140 gcaagcgctacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtaca 199 ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 209 gcaagcgctacttccacaaccgcctgaagcctgcaaagcttacctggacagccatgtaca 268 Query: 200 ggaagcagcacaagaaggacatcca 224 ||||||||||||||||||| ||||| Sbjct: 269 ggaagcagcacaagaaggatatcca 293
>dbj|AB118010.1| Oryza sativa (japonica cultivar-group) bip123 mRNA for BRI1-KD interacting protein 123, partial cds Length = 461 Score = 196 bits (99), Expect = 7e-47 Identities = 147/163 (90%) Strand = Plus / Plus Query: 285 tggtgccacactggaagttatccagaagaagagggctgagaagcctgaagtccgtgatgc 344 |||||| ||||||||||||||||| ||||||||| |||||| ||||||||||||||||| Sbjct: 1 tggtgctacactggaagttatccaaaagaagaggagtgagaaacctgaagtccgtgatgc 60 Query: 345 tgccagagaagccgctcttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaa 404 ||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 61 agccagagaagcggctctccgtgagatcaaggagcgcatcaagaaaaccaaggatgagaa 120 Query: 405 gaaggccaagaaggcagaggtgaccaagtcccagaagtcacag 447 ||||| ||||||||||||||| | || || |||||| ||||| Sbjct: 121 aaaggcaaagaaggcagaggtggcaaaatctcagaagacacag 163
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 190 bits (96), Expect = 4e-45 Identities = 135/148 (91%) Strand = Plus / Plus Query: 215 aggacatccatgctgaggctgccaagaagaggcgccgcaccaccaagaagccgtactcac 274 ||||||| |||||||| |||| |||||||||||| ||||||||||||||||| ||||||| Sbjct: 34677705 aggacattcatgctgaagctgtcaagaagaggcgtcgcaccaccaagaagccatactcac 34677764 Query: 275 ggtcgattgttggtgccacactggaagttatccagaagaagagggctgagaagcctgaag 334 |||| ||||||||||| ||||||||||||||||| ||||||||| |||||| ||||||| Sbjct: 34677765 ggtcaattgttggtgctacactggaagttatccaaaagaagaggagtgagaaacctgaag 34677824 Query: 335 tccgtgatgctgccagagaagccgctct 362 |||||||||| ||||||||||| ||||| Sbjct: 34677825 tccgtgatgcagccagagaagcggctct 34677852 Score = 155 bits (78), Expect = 2e-34 Identities = 99/106 (93%) Strand = Plus / Plus Query: 112 caggttttcctctttgccaactcaaaatgcaagcgctacttccacaaccgcctgaagcct 171 |||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 34677128 caggtttttctgtttgccaactcgaaatgcaagcgctacttccacaaccgcctgaagcct 34677187 Query: 172 gcaaagctttgctggacagcaatgtacaggaagcagcacaagaagg 217 || |||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 34677188 gccaagcttacctggacagctatgtacaggaagcagcacaagaagg 34677233 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Plus Query: 365 gtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcagagg 424 ||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 34678213 gtgagatcaaggagcgcatcaagaaaaccaaggatgagaaaaaggcaaagaaggcagagg 34678272 Query: 425 tgaccaagtcccagaagtcacag 447 || | || || |||||| ||||| Sbjct: 34678273 tggcaaaatctcagaagacacag 34678295 Score = 91.7 bits (46), Expect = 3e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 39 gactgagctttgccgttttagcggccagaagatttacccagggaagggtatcaggttcat 98 |||||| |||||||||||||| || |||||||| |||||||| ||||||||||||||||| Sbjct: 34676963 gactgaactttgccgttttagtgggcagaagatatacccaggcaagggtatcaggttcat 34677022 Query: 99 tcgttcagattcacaggt 116 |||| | ||||| ||||| Sbjct: 34677023 tcgtgctgattcccaggt 34677040
>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0085D07 Length = 172483 Score = 190 bits (96), Expect = 4e-45 Identities = 135/148 (91%) Strand = Plus / Plus Query: 215 aggacatccatgctgaggctgccaagaagaggcgccgcaccaccaagaagccgtactcac 274 ||||||| |||||||| |||| |||||||||||| ||||||||||||||||| ||||||| Sbjct: 129722 aggacattcatgctgaagctgtcaagaagaggcgtcgcaccaccaagaagccatactcac 129781 Query: 275 ggtcgattgttggtgccacactggaagttatccagaagaagagggctgagaagcctgaag 334 |||| ||||||||||| ||||||||||||||||| ||||||||| |||||| ||||||| Sbjct: 129782 ggtcaattgttggtgctacactggaagttatccaaaagaagaggagtgagaaacctgaag 129841 Query: 335 tccgtgatgctgccagagaagccgctct 362 |||||||||| ||||||||||| ||||| Sbjct: 129842 tccgtgatgcagccagagaagcggctct 129869 Score = 155 bits (78), Expect = 2e-34 Identities = 99/106 (93%) Strand = Plus / Plus Query: 112 caggttttcctctttgccaactcaaaatgcaagcgctacttccacaaccgcctgaagcct 171 |||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 129145 caggtttttctgtttgccaactcgaaatgcaagcgctacttccacaaccgcctgaagcct 129204 Query: 172 gcaaagctttgctggacagcaatgtacaggaagcagcacaagaagg 217 || |||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 129205 gccaagcttacctggacagctatgtacaggaagcagcacaagaagg 129250 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Plus Query: 365 gtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcagagg 424 ||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 130230 gtgagatcaaggagcgcatcaagaaaaccaaggatgagaaaaaggcaaagaaggcagagg 130289 Query: 425 tgaccaagtcccagaagtcacag 447 || | || || |||||| ||||| Sbjct: 130290 tggcaaaatctcagaagacacag 130312 Score = 91.7 bits (46), Expect = 3e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 39 gactgagctttgccgttttagcggccagaagatttacccagggaagggtatcaggttcat 98 |||||| |||||||||||||| || |||||||| |||||||| ||||||||||||||||| Sbjct: 128980 gactgaactttgccgttttagtgggcagaagatatacccaggcaagggtatcaggttcat 129039 Query: 99 tcgttcagattcacaggt 116 |||| | ||||| ||||| Sbjct: 129040 tcgtgctgattcccaggt 129057
>gb|AC093952.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1004_E02, complete sequence Length = 127642 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 111 acaggttttcctctttgccaactcaaaatgcaagcgctacttccacaaccgcctgaagcc 170 |||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 77046 acaggtcttcctttttgcaaactcaaaatgcaagcgctacttccacaaccgcctgaagcc 76987 Query: 171 tgcaaagctttgctggacagcaatgtacaggaagcagcacaagaagg 217 |||||||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 76986 tgcaaagcttacctggacagccatgtacaggaagcagcacaagaagg 76940 Score = 157 bits (79), Expect = 6e-35 Identities = 133/151 (88%) Strand = Plus / Minus Query: 215 aggacatccatgctgaggctgccaagaagaggcgccgcaccaccaagaagccgtactcac 274 |||| ||||||||||| |||| |||||||||||||||||||||||||||||| ||||| Sbjct: 76457 aggatatccatgctgaagctgtcaagaagaggcgccgcaccaccaagaagccatactcta 76398 Query: 275 ggtcgattgttggtgccacactggaagttatccagaagaagagggctgagaagcctgaag 334 |||| ||||||||||| | ||||||| ||||| |||||||| ||||| |||||||||| Sbjct: 76397 ggtcaattgttggtgcttcgttggaagtcatccaaaagaagagagctgaaaagcctgaag 76338 Query: 335 tccgtgatgctgccagagaagccgctcttcg 365 | ||||||||||| |||||||| |||||||| Sbjct: 76337 ttcgtgatgctgctagagaagctgctcttcg 76307 Score = 125 bits (63), Expect = 2e-25 Identities = 131/153 (85%), Gaps = 3/153 (1%) Strand = Plus / Minus Query: 365 gtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcagagg 424 ||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 75933 gtgagatcaaggaacgcatcaagaagaccaaggatgaaaagaaggcgaagaaggctgagg 75874 Query: 425 tgaccaagtcccagaagtcacaggggggcaagggtgccgtgcagaagggttccaagggcc 484 | ||||||||||||||||| ||| | |||||||||| | || |||||||||||||| Sbjct: 75873 taaccaagtcccagaagtcgcagtcg---aagggtgccgccccgaggggttccaagggcc 75817 Query: 485 caaagcttggcggtggcggcggcaagcgttgaa 517 | ||| |||| ||||| || || ||||| |||| Sbjct: 75816 cgaagattggtggtggtggtggaaagcgctgaa 75784 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 43 gagctttgccgttttagcggccagaagatttacccagggaagggtatcaggttcattcgt 102 ||||||||||||||||| ||||||||||| || ||||||||||| || | || |||||| Sbjct: 77201 gagctttgccgttttagtggccagaagatatatccagggaagggcattcgctttattcgt 77142 Query: 103 tcagattcacaggt 116 | ||||||||||| Sbjct: 77141 gctgattcacaggt 77128
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 111 acaggttttcctctttgccaactcaaaatgcaagcgctacttccacaaccgcctgaagcc 170 |||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 23796225 acaggtcttcctttttgcaaactcaaaatgcaagcgctacttccacaaccgcctgaagcc 23796166 Query: 171 tgcaaagctttgctggacagcaatgtacaggaagcagcacaagaagg 217 |||||||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 23796165 tgcaaagcttacctggacagccatgtacaggaagcagcacaagaagg 23796119 Score = 157 bits (79), Expect = 6e-35 Identities = 133/151 (88%) Strand = Plus / Minus Query: 215 aggacatccatgctgaggctgccaagaagaggcgccgcaccaccaagaagccgtactcac 274 |||| ||||||||||| |||| |||||||||||||||||||||||||||||| ||||| Sbjct: 23795636 aggatatccatgctgaagctgtcaagaagaggcgccgcaccaccaagaagccatactcta 23795577 Query: 275 ggtcgattgttggtgccacactggaagttatccagaagaagagggctgagaagcctgaag 334 |||| ||||||||||| | ||||||| ||||| |||||||| ||||| |||||||||| Sbjct: 23795576 ggtcaattgttggtgcttcgttggaagtcatccaaaagaagagagctgaaaagcctgaag 23795517 Query: 335 tccgtgatgctgccagagaagccgctcttcg 365 | ||||||||||| |||||||| |||||||| Sbjct: 23795516 ttcgtgatgctgctagagaagctgctcttcg 23795486 Score = 125 bits (63), Expect = 2e-25 Identities = 131/153 (85%), Gaps = 3/153 (1%) Strand = Plus / Minus Query: 365 gtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcagagg 424 ||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 23795112 gtgagatcaaggaacgcatcaagaagaccaaggatgaaaagaaggcgaagaaggctgagg 23795053 Query: 425 tgaccaagtcccagaagtcacaggggggcaagggtgccgtgcagaagggttccaagggcc 484 | ||||||||||||||||| ||| | |||||||||| | || |||||||||||||| Sbjct: 23795052 taaccaagtcccagaagtcgcagtcg---aagggtgccgccccgaggggttccaagggcc 23794996 Query: 485 caaagcttggcggtggcggcggcaagcgttgaa 517 | ||| |||| ||||| || || ||||| |||| Sbjct: 23794995 cgaagattggtggtggtggtggaaagcgctgaa 23794963 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 43 gagctttgccgttttagcggccagaagatttacccagggaagggtatcaggttcattcgt 102 ||||||||||||||||| ||||||||||| || ||||||||||| || | || |||||| Sbjct: 23796380 gagctttgccgttttagtggccagaagatatatccagggaagggcattcgctttattcgt 23796321 Query: 103 tcagattcacaggt 116 | ||||||||||| Sbjct: 23796320 gctgattcacaggt 23796307
>ref|NM_115162.2| Arabidopsis thaliana structural constituent of ribosome AT3G53020 mRNA, complete cds Length = 787 Score = 161 bits (81), Expect = 4e-36 Identities = 144/165 (87%) Strand = Plus / Plus Query: 254 ccaccaagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaaga 313 ||||||||||||| |||||| |||| ||||||||||| || ||||||| || ||||||| Sbjct: 340 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 399 Query: 314 agagggctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatca 373 |||| ||||||||||||||||| |||||||| ||||| ||||| ||||| |||||||||| Sbjct: 400 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctctgcgtgagatca 459 Query: 374 aggagcgcatcaagaagaccaaggatgagaagaaggccaagaagg 418 |||| | ||||| |||||||| ||||| |||||||| ||||||| Sbjct: 460 aggaaagaatcaaaaagaccaaagatgaaaagaaggctaagaagg 504 Score = 69.9 bits (35), Expect = 1e-08 Identities = 152/191 (79%) Strand = Plus / Plus Query: 28 atggttctgaagactgagctttgccgttttagcggccagaagatttacccagggaagggt 87 |||||||| ||||| |||||||| ||||| || || ||||||||||||||||| | || Sbjct: 114 atggttctcaagacggagctttgtcgtttcagtggacagaagatttacccaggaagagga 173 Query: 88 atcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaatgcaagcgc 147 || ||||| || || || ||||| ||||||||| | ||| ||||||||||| ||| | Sbjct: 174 attaggtttatccgatctgattctcaggttttcttgtttcttaactcaaaatgtaagagg 233 Query: 148 tacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtacaggaagcag 207 |||||||| ||| ||||||| | |||||| ||||| || |||||||| ||||| Sbjct: 234 tacttccataacaagttgaagccatccaagcttgcatggactgccatgtacagaaagcaa 293 Query: 208 cacaagaagga 218 ||||||||||| Sbjct: 294 cacaagaagga 304
>gb|AY093180.1| Arabidopsis thaliana 60S ribosomal protein-like (At3g53020) mRNA, complete cds Length = 728 Score = 161 bits (81), Expect = 4e-36 Identities = 144/165 (87%) Strand = Plus / Plus Query: 254 ccaccaagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaaga 313 ||||||||||||| |||||| |||| ||||||||||| || ||||||| || ||||||| Sbjct: 294 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 353 Query: 314 agagggctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatca 373 |||| ||||||||||||||||| |||||||| ||||| ||||| ||||| |||||||||| Sbjct: 354 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctctgcgtgagatca 413 Query: 374 aggagcgcatcaagaagaccaaggatgagaagaaggccaagaagg 418 |||| | ||||| |||||||| ||||| |||||||| ||||||| Sbjct: 414 aggaaagaatcaaaaagaccaaagatgaaaagaaggctaagaagg 458 Score = 69.9 bits (35), Expect = 1e-08 Identities = 152/191 (79%) Strand = Plus / Plus Query: 28 atggttctgaagactgagctttgccgttttagcggccagaagatttacccagggaagggt 87 |||||||| ||||| |||||||| ||||| || || ||||||||||||||||| | || Sbjct: 68 atggttctcaagacggagctttgtcgtttcagtggacagaagatttacccaggaagagga 127 Query: 88 atcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaatgcaagcgc 147 || ||||| || || || ||||| ||||||||| | ||| ||||||||||| ||| | Sbjct: 128 attaggtttatccgatctgattctcaggttttcttgtttcttaactcaaaatgtaagagg 187 Query: 148 tacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtacaggaagcag 207 |||||||| ||| ||||||| | |||||| ||||| || |||||||| ||||| Sbjct: 188 tacttccataacaagttgaagccatccaagcttgcatggactgccatgtacagaaagcaa 247 Query: 208 cacaagaagga 218 ||||||||||| Sbjct: 248 cacaagaagga 258
>dbj|AB199790.1| Arabidopsis thaliana STV1 mRNA for ribosomal protein L24, complete cds Length = 684 Score = 161 bits (81), Expect = 4e-36 Identities = 144/165 (87%) Strand = Plus / Plus Query: 254 ccaccaagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaaga 313 ||||||||||||| |||||| |||| ||||||||||| || ||||||| || ||||||| Sbjct: 275 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 334 Query: 314 agagggctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatca 373 |||| ||||||||||||||||| |||||||| ||||| ||||| ||||| |||||||||| Sbjct: 335 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctctgcgtgagatca 394 Query: 374 aggagcgcatcaagaagaccaaggatgagaagaaggccaagaagg 418 |||| | ||||| |||||||| ||||| |||||||| ||||||| Sbjct: 395 aggaaagaatcaaaaagaccaaagatgaaaagaaggctaagaagg 439 Score = 69.9 bits (35), Expect = 1e-08 Identities = 152/191 (79%) Strand = Plus / Plus Query: 28 atggttctgaagactgagctttgccgttttagcggccagaagatttacccagggaagggt 87 |||||||| ||||| |||||||| ||||| || || ||||||||||||||||| | || Sbjct: 49 atggttctcaagacagagctttgtcgtttcagtggacagaagatttacccaggaagagga 108 Query: 88 atcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaatgcaagcgc 147 || ||||| || || || ||||| ||||||||| | ||| ||||||||||| ||| | Sbjct: 109 attaggtttatccgatctgattctcaggttttcttgtttcttaactcaaaatgtaagagg 168 Query: 148 tacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtacaggaagcag 207 |||||||| ||| ||||||| | |||||| ||||| || |||||||| ||||| Sbjct: 169 tacttccataacaagttgaagccatccaagcttgcatggactgccatgtacagaaagcaa 228 Query: 208 cacaagaagga 218 ||||||||||| Sbjct: 229 cacaagaagga 239
>gb|AY058129.1| Arabidopsis thaliana AT3g53020/F8J2_190 mRNA, complete cds Length = 787 Score = 161 bits (81), Expect = 4e-36 Identities = 144/165 (87%) Strand = Plus / Plus Query: 254 ccaccaagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaaga 313 ||||||||||||| |||||| |||| ||||||||||| || ||||||| || ||||||| Sbjct: 340 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 399 Query: 314 agagggctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatca 373 |||| ||||||||||||||||| |||||||| ||||| ||||| ||||| |||||||||| Sbjct: 400 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctctgcgtgagatca 459 Query: 374 aggagcgcatcaagaagaccaaggatgagaagaaggccaagaagg 418 |||| | ||||| |||||||| ||||| |||||||| ||||||| Sbjct: 460 aggaaagaatcaaaaagaccaaagatgaaaagaaggctaagaagg 504 Score = 69.9 bits (35), Expect = 1e-08 Identities = 152/191 (79%) Strand = Plus / Plus Query: 28 atggttctgaagactgagctttgccgttttagcggccagaagatttacccagggaagggt 87 |||||||| ||||| |||||||| ||||| || || ||||||||||||||||| | || Sbjct: 114 atggttctcaagacggagctttgtcgtttcagtggacagaagatttacccaggaagagga 173 Query: 88 atcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaatgcaagcgc 147 || ||||| || || || ||||| ||||||||| | ||| ||||||||||| ||| | Sbjct: 174 attaggtttatccgatctgattctcaggttttcttgtttcttaactcaaaatgtaagagg 233 Query: 148 tacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtacaggaagcag 207 |||||||| ||| ||||||| | |||||| ||||| || |||||||| ||||| Sbjct: 234 tacttccataacaagttgaagccatccaagcttgcatggactgccatgtacagaaagcaa 293 Query: 208 cacaagaagga 218 ||||||||||| Sbjct: 294 cacaagaagga 304
>gb|BT006545.1| Arabidopsis thaliana At3g53020 gene, complete cds Length = 492 Score = 161 bits (81), Expect = 4e-36 Identities = 144/165 (87%) Strand = Plus / Plus Query: 254 ccaccaagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaaga 313 ||||||||||||| |||||| |||| ||||||||||| || ||||||| || ||||||| Sbjct: 227 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 286 Query: 314 agagggctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatca 373 |||| ||||||||||||||||| |||||||| ||||| ||||| ||||| |||||||||| Sbjct: 287 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctctgcgtgagatca 346 Query: 374 aggagcgcatcaagaagaccaaggatgagaagaaggccaagaagg 418 |||| | ||||| |||||||| ||||| |||||||| ||||||| Sbjct: 347 aggaaagaatcaaaaagaccaaagatgaaaagaaggctaagaagg 391 Score = 69.9 bits (35), Expect = 1e-08 Identities = 152/191 (79%) Strand = Plus / Plus Query: 28 atggttctgaagactgagctttgccgttttagcggccagaagatttacccagggaagggt 87 |||||||| ||||| |||||||| ||||| || || ||||||||||||||||| | || Sbjct: 1 atggttctcaagacggagctttgtcgtttcagtggacagaagatttacccaggaagagga 60 Query: 88 atcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaatgcaagcgc 147 || ||||| || || || ||||| ||||||||| | ||| ||||||||||| ||| | Sbjct: 61 attaggtttatccgatctgattctcaggttttcttgtttcttaactcaaaatgtaagagg 120 Query: 148 tacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtacaggaagcag 207 |||||||| ||| ||||||| | |||||| ||||| || |||||||| ||||| Sbjct: 121 tacttccataacaagttgaagccatccaagcttgcatggactgccatgtacagaaagcaa 180 Query: 208 cacaagaagga 218 ||||||||||| Sbjct: 181 cacaagaagga 191
>emb|BX822812.1|CNS0A77L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB65ZF02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 708 Score = 161 bits (81), Expect = 4e-36 Identities = 144/165 (87%) Strand = Plus / Plus Query: 254 ccaccaagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaaga 313 ||||||||||||| |||||| |||| ||||||||||| || ||||||| || ||||||| Sbjct: 261 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 320 Query: 314 agagggctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatca 373 |||| ||||||||||||||||| |||||||| ||||| ||||| ||||| |||||||||| Sbjct: 321 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctctgcgtgagatca 380 Query: 374 aggagcgcatcaagaagaccaaggatgagaagaaggccaagaagg 418 |||| | ||||| |||||||| ||||| |||||||| ||||||| Sbjct: 381 aggaaagaatcaaaaagaccaaagatgaaaagaaggctaagaagg 425 Score = 77.8 bits (39), Expect = 4e-11 Identities = 153/191 (80%) Strand = Plus / Plus Query: 28 atggttctgaagactgagctttgccgttttagcggccagaagatttacccagggaagggt 87 |||||||| ||||| |||||||| ||||| || || ||||||||||||||||| | || Sbjct: 35 atggttctcaagacggagctttgtcgtttcagtggacagaagatttacccaggaagagga 94 Query: 88 atcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaatgcaagcgc 147 || ||||| || || || ||||| ||||||||| | ||| ||||||||||| ||| | Sbjct: 95 attaggtttatccgatctgattctcaggttttcttgtttcttaactcaaaatgtaagagg 154 Query: 148 tacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtacaggaagcag 207 |||||||| ||| | ||||||| | |||||| ||||| || |||||||| ||||| Sbjct: 155 tacttccataacaggttgaagccatccaagcttgcatggactgccatgtacagaaagcaa 214 Query: 208 cacaagaagga 218 ||||||||||| Sbjct: 215 cacaagaagga 225
>emb|BX826253.1|CNS0A6AJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL94ZD11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 765 Score = 161 bits (81), Expect = 4e-36 Identities = 144/165 (87%) Strand = Plus / Plus Query: 254 ccaccaagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaaga 313 ||||||||||||| |||||| |||| ||||||||||| || ||||||| || ||||||| Sbjct: 318 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 377 Query: 314 agagggctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatca 373 |||| ||||||||||||||||| |||||||| ||||| ||||| ||||| |||||||||| Sbjct: 378 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctctgcgtgagatca 437 Query: 374 aggagcgcatcaagaagaccaaggatgagaagaaggccaagaagg 418 |||| | ||||| |||||||| ||||| |||||||| ||||||| Sbjct: 438 aggaaagaatcaaaaagaccaaagatgaaaagaaggctaagaagg 482 Score = 69.9 bits (35), Expect = 1e-08 Identities = 152/191 (79%) Strand = Plus / Plus Query: 28 atggttctgaagactgagctttgccgttttagcggccagaagatttacccagggaagggt 87 |||||||| ||||| |||||||| ||||| || || ||||||||||||||||| | || Sbjct: 92 atggttctcaagacggagctttgtcgtttcagtggacagaagatttacccaggaagagga 151 Query: 88 atcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaatgcaagcgc 147 || ||||| || || || ||||| ||||||||| | ||| ||||||||||| ||| | Sbjct: 152 attaggtttatccgatctgattctcaggttttcttgtttcttaactcaaaatgtaagagg 211 Query: 148 tacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtacaggaagcag 207 |||||||| ||| ||||||| | |||||| ||||| || |||||||| ||||| Sbjct: 212 tacttccataacaagttgaagccatccaagcttgcatggactgccatgtacagaaagcaa 271 Query: 208 cacaagaagga 218 ||||||||||| Sbjct: 272 cacaagaagga 282
>emb|BX821500.1|CNS0A99G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL45ZF12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 658 Score = 159 bits (80), Expect = 1e-35 Identities = 140/160 (87%) Strand = Plus / Plus Query: 259 aagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagagg 318 |||||||| |||||| |||||||||| ||||| || |||| ||||| ||||||||| || Sbjct: 259 aagaagccttactcaaggtcgattgtcggtgctactttggaggttattcagaagaagcgg 318 Query: 319 gctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggag 378 || |||||||||||||| |||||||| || |||||||| || || ||||||||||||||| Sbjct: 319 gcagagaagcctgaagttcgtgatgccgctagagaagctgccctacgtgagatcaaggag 378 Query: 379 cgcatcaagaagaccaaggatgagaagaaggccaagaagg 418 | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 379 agaatcaagaagaccaaggacgagaagaaggcaaagaagg 418 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 28 atggttctgaagactgagctttgccgttttagcggccagaagatttaccc 77 |||||||| ||||||||||||||||| || || |||||||| |||||||| Sbjct: 28 atggttctcaagactgagctttgccgattcagtggccagaaaatttaccc 77 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Plus Query: 175 aagctttgctggacagcaatgtacaggaagcagcacaagaaggac 219 |||||||||||||| || ||||| | |||||||||||||||||| Sbjct: 175 aagctttgctggactgctttgtaccgaaagcagcacaagaaggac 219
>gb|BT013177.1| Lycopersicon esculentum clone 134253R, mRNA sequence Length = 781 Score = 155 bits (78), Expect = 2e-34 Identities = 318/398 (79%) Strand = Plus / Plus Query: 28 atggttctgaagactgagctttgccgttttagcggccagaagatttacccagggaagggt 87 |||||||| ||||| || ||||||||||| || || ||||||||||| |||| || Sbjct: 33 atggttctcaagacagaactttgccgtttcagtggtgccaagatttaccctgggagaggc 92 Query: 88 atcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaatgcaagcgc 147 ||||| || || || ||||| || ||||| ||||| || | |||||||||||| || | | Sbjct: 93 atcagatttatccggtcagactctcaggtgttcctattcgtcaactcaaaatgtaaacac 152 Query: 148 tacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtacaggaagcag 207 |||||||||||| ||||||| | |||||| |||||||| ||||| |||||||| Sbjct: 153 tacttccacaacaagttgaagccatccaagcttacatggacagctatgtataggaagcaa 212 Query: 208 cacaagaaggacatccatgctgaggctgccaagaagaggcgccgcaccaccaagaagccg 267 ||||||||||| || || ||||| ||||||||||| || |||||||||||||| Sbjct: 213 cacaagaaggatattgcacaagaagctgctaagaagaggcgacgtaccaccaagaagcct 272 Query: 268 tactcacggtcgattgttggtgccacactggaagttatccagaagaagagggctgagaag 327 ||||| |||| ||||| ||||| || |||| || |||||||||||||| |||| | | Sbjct: 273 tactctaggtctattgtgggtgcaaccttggaggtaatccagaagaagagaactgaaagg 332 Query: 328 cctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggagcgcatcaag 387 || ||||| || ||||||||||| || || ||||||||||| || ||||| | |||||| Sbjct: 333 ccagaagttcgagatgctgccagggaggctgctcttcgtgaaattaaggaaaggatcaag 392 Query: 388 aagaccaaggatgagaagaaggccaagaaggcagaggt 425 ||||| |||||||| |||||||| ||||| |||||||| Sbjct: 393 aagacaaaggatgaaaagaaggctaagaaagcagaggt 430
>ref|NM_129217.2| Arabidopsis thaliana structural constituent of ribosome AT2G36620 mRNA, complete cds Length = 682 Score = 151 bits (76), Expect = 4e-33 Identities = 139/160 (86%) Strand = Plus / Plus Query: 259 aagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagagg 318 |||||||| |||||| |||||||||| ||||| || |||| ||||| ||||||||| | Sbjct: 278 aagaagccttactcaaggtcgattgtcggtgctactttggaggttattcagaagaagcga 337 Query: 319 gctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggag 378 || |||||||||||||| |||||||| || |||||||| || || ||||||||||||||| Sbjct: 338 gcagagaagcctgaagttcgtgatgccgctagagaagctgccctacgtgagatcaaggag 397 Query: 379 cgcatcaagaagaccaaggatgagaagaaggccaagaagg 418 | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 398 agaatcaagaagaccaaggacgagaagaaggcaaagaagg 437 Score = 71.9 bits (36), Expect = 3e-09 Identities = 153/192 (79%) Strand = Plus / Plus Query: 28 atggttctgaagactgagctttgccgttttagcggccagaagatttacccagggaagggt 87 |||||||| ||||||||||||||||| || || |||||||| |||||||| || | || Sbjct: 47 atggttctcaagactgagctttgccgattcagtggccagaaaatttaccctggtagaggg 106 Query: 88 atcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaatgcaagcgc 147 ||||| || || || || || || ||||| || | ||| |||||| ||||| ||| | Sbjct: 107 atcagatttatccgatcggactctcaggtgtttttgtttctcaactccaaatgtaagagg 166 Query: 148 tacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtacaggaagcag 207 || ||||||||| ||||||| | |||||||||||||| || |||||| | |||||| Sbjct: 167 tatttccacaacaagttgaagccatctaagctttgctggactgctatgtaccgaaagcag 226 Query: 208 cacaagaaggac 219 |||||||||||| Sbjct: 227 cacaagaaggac 238
>gb|AY114728.1| Arabidopsis thaliana 60S ribosomal protein L24 (At2g36620) mRNA, complete cds Length = 529 Score = 151 bits (76), Expect = 4e-33 Identities = 139/160 (86%) Strand = Plus / Plus Query: 259 aagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagagg 318 |||||||| |||||| |||||||||| ||||| || |||| ||||| ||||||||| | Sbjct: 232 aagaagccttactcaaggtcgattgtcggtgctactttggaggttattcagaagaagcga 291 Query: 319 gctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggag 378 || |||||||||||||| |||||||| || |||||||| || || ||||||||||||||| Sbjct: 292 gcagagaagcctgaagttcgtgatgccgctagagaagctgccctacgtgagatcaaggag 351 Query: 379 cgcatcaagaagaccaaggatgagaagaaggccaagaagg 418 | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 352 agaatcaagaagaccaaggacgagaagaaggcaaagaagg 391 Score = 71.9 bits (36), Expect = 3e-09 Identities = 153/192 (79%) Strand = Plus / Plus Query: 28 atggttctgaagactgagctttgccgttttagcggccagaagatttacccagggaagggt 87 |||||||| ||||||||||||||||| || || |||||||| |||||||| || | || Sbjct: 1 atggttctcaagactgagctttgccgattcagtggccagaaaatttaccctggtagaggg 60 Query: 88 atcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaatgcaagcgc 147 ||||| || || || || || || ||||| || | ||| |||||| ||||| ||| | Sbjct: 61 atcagatttatccgatcggactctcaggtgtttttgtttctcaactccaaatgtaagagg 120 Query: 148 tacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtacaggaagcag 207 || ||||||||| ||||||| | |||||||||||||| || |||||| | |||||| Sbjct: 121 tatttccacaacaagttgaagccatctaagctttgctggactgctatgtaccgaaagcag 180 Query: 208 cacaagaaggac 219 |||||||||||| Sbjct: 181 cacaagaaggac 192
>gb|AY072350.1| Arabidopsis thaliana 60S ribosomal protein L24 (At2g36620) mRNA, complete cds Length = 674 Score = 151 bits (76), Expect = 4e-33 Identities = 139/160 (86%) Strand = Plus / Plus Query: 259 aagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagagg 318 |||||||| |||||| |||||||||| ||||| || |||| ||||| ||||||||| | Sbjct: 272 aagaagccttactcaaggtcgattgtcggtgctactttggaggttattcagaagaagcga 331 Query: 319 gctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggag 378 || |||||||||||||| |||||||| || |||||||| || || ||||||||||||||| Sbjct: 332 gcagagaagcctgaagttcgtgatgccgctagagaagctgccctacgtgagatcaaggag 391 Query: 379 cgcatcaagaagaccaaggatgagaagaaggccaagaagg 418 | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 392 agaatcaagaagaccaaggacgagaagaaggcaaagaagg 431 Score = 71.9 bits (36), Expect = 3e-09 Identities = 153/192 (79%) Strand = Plus / Plus Query: 28 atggttctgaagactgagctttgccgttttagcggccagaagatttacccagggaagggt 87 |||||||| ||||||||||||||||| || || |||||||| |||||||| || | || Sbjct: 41 atggttctcaagactgagctttgccgattcagtggccagaaaatttaccctggtagaggg 100 Query: 88 atcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaatgcaagcgc 147 ||||| || || || || || || ||||| || | ||| |||||| ||||| ||| | Sbjct: 101 atcagatttatccgatcggactctcaggtgtttttgtttctcaactccaaatgtaagagg 160 Query: 148 tacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtacaggaagcag 207 || ||||||||| ||||||| | |||||||||||||| || |||||| | |||||| Sbjct: 161 tatttccacaacaagttgaagccatctaagctttgctggactgctatgtaccgaaagcag 220 Query: 208 cacaagaaggac 219 |||||||||||| Sbjct: 221 cacaagaaggac 232
>gb|AY058086.1| Arabidopsis thaliana At2g36620/F1O11.25 mRNA, complete cds Length = 675 Score = 151 bits (76), Expect = 4e-33 Identities = 139/160 (86%) Strand = Plus / Plus Query: 259 aagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagagg 318 |||||||| |||||| |||||||||| ||||| || |||| ||||| ||||||||| | Sbjct: 270 aagaagccttactcaaggtcgattgtcggtgctactttggaggttattcagaagaagcga 329 Query: 319 gctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggag 378 || |||||||||||||| |||||||| || |||||||| || || ||||||||||||||| Sbjct: 330 gcagagaagcctgaagttcgtgatgccgctagagaagctgccctacgtgagatcaaggag 389 Query: 379 cgcatcaagaagaccaaggatgagaagaaggccaagaagg 418 | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 390 agaatcaagaagaccaaggacgagaagaaggcaaagaagg 429 Score = 71.9 bits (36), Expect = 3e-09 Identities = 153/192 (79%) Strand = Plus / Plus Query: 28 atggttctgaagactgagctttgccgttttagcggccagaagatttacccagggaagggt 87 |||||||| ||||||||||||||||| || || |||||||| |||||||| || | || Sbjct: 39 atggttctcaagactgagctttgccgattcagtggccagaaaatttaccctggtagaggg 98 Query: 88 atcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaatgcaagcgc 147 ||||| || || || || || || ||||| || | ||| |||||| ||||| ||| | Sbjct: 99 atcagatttatccgatcggactctcaggtgtttttgtttctcaactccaaatgtaagagg 158 Query: 148 tacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtacaggaagcag 207 || ||||||||| ||||||| | |||||||||||||| || |||||| | |||||| Sbjct: 159 tatttccacaacaagttgaagccatctaagctttgctggactgctatgtaccgaaagcag 218 Query: 208 cacaagaaggac 219 |||||||||||| Sbjct: 219 cacaagaaggac 230
>gb|AY085323.1| Arabidopsis thaliana clone 14564 mRNA, complete sequence Length = 677 Score = 151 bits (76), Expect = 4e-33 Identities = 139/160 (86%) Strand = Plus / Plus Query: 259 aagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagagg 318 |||||||| |||||| |||||||||| ||||| || |||| ||||| ||||||||| | Sbjct: 278 aagaagccttactcaaggtcgattgtcggtgctactttggaggttattcagaagaagcga 337 Query: 319 gctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggag 378 || |||||||||||||| |||||||| || |||||||| || || ||||||||||||||| Sbjct: 338 gcagagaagcctgaagttcgtgatgccgctagagaagctgccctacgtgagatcaaggag 397 Query: 379 cgcatcaagaagaccaaggatgagaagaaggccaagaagg 418 | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 398 agaatcaagaagaccaaggacgagaagaaggcaaagaagg 437 Score = 71.9 bits (36), Expect = 3e-09 Identities = 153/192 (79%) Strand = Plus / Plus Query: 28 atggttctgaagactgagctttgccgttttagcggccagaagatttacccagggaagggt 87 |||||||| ||||||||||||||||| || || |||||||| |||||||| || | || Sbjct: 47 atggttctcaagactgagctttgccgattcagtggccagaaaatttaccctggtagaggg 106 Query: 88 atcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaatgcaagcgc 147 ||||| || || || || || || ||||| || | ||| |||||| ||||| ||| | Sbjct: 107 atcagatttatccgatcggactctcaggtgtttttgtttctcaactccaaatgtaagagg 166 Query: 148 tacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtacaggaagcag 207 || ||||||||| ||||||| | |||||||||||||| || |||||| | |||||| Sbjct: 167 tatttccacaacaagttgaagccatctaagctttgctggactgctatgtaccgaaagcag 226 Query: 208 cacaagaaggac 219 |||||||||||| Sbjct: 227 cacaagaaggac 238
>emb|AJ293729.1|ATH293729 Arabidopsis thaliana partial mRNA for 60S ribosomal protein L24 (RL24 gene) Length = 1310 Score = 151 bits (76), Expect = 4e-33 Identities = 139/160 (86%) Strand = Plus / Plus Query: 259 aagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagagg 318 |||||||| |||||| |||||||||| ||||| || |||| ||||| ||||||||| | Sbjct: 259 aagaagccttactcaaggtcgattgtcggtgctactttggaggttattcagaagaagcga 318 Query: 319 gctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggag 378 || |||||||||||||| |||||||| || |||||||| || || ||||||||||||||| Sbjct: 319 gcagagaagcctgaagttcgtgatgccgctagagaagctgccctacgtgagatcaaggag 378 Query: 379 cgcatcaagaagaccaaggatgagaagaaggccaagaagg 418 | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 379 agaatcaagaagaccaaggacgagaagaaggcaaagaagg 418 Score = 71.9 bits (36), Expect = 3e-09 Identities = 153/192 (79%) Strand = Plus / Plus Query: 28 atggttctgaagactgagctttgccgttttagcggccagaagatttacccagggaagggt 87 |||||||| ||||||||||||||||| || || |||||||| |||||||| || | || Sbjct: 28 atggttctcaagactgagctttgccgattcagtggccagaaaatttaccctggtagaggg 87 Query: 88 atcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaatgcaagcgc 147 ||||| || || || || || || ||||| || | ||| |||||| ||||| ||| | Sbjct: 88 atcagatttatccgatcggactctcaggtgtttttgtttctcaactccaaatgtaagagg 147 Query: 148 tacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtacaggaagcag 207 || ||||||||| ||||||| | |||||||||||||| || |||||| | |||||| Sbjct: 148 tatttccacaacaagttgaagccatctaagctttgctggactgctatgtaccgaaagcag 207 Query: 208 cacaagaaggac 219 |||||||||||| Sbjct: 208 cacaagaaggac 219
>gb|AY310816.1| Nicotiana benthamiana clone 12-370 unknown mRNA Length = 476 Score = 129 bits (65), Expect = 1e-26 Identities = 158/189 (83%) Strand = Plus / Plus Query: 238 aagaagaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacactg 297 ||||||||||| || | || |||||||| ||||| |||| ||||| ||||| || ||| Sbjct: 52 aagaagaggcgacgtgcaacaaagaagccttactccaggtccattgtgggtgcaaccctg 111 Query: 298 gaagttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagcc 357 || ||||||||||||||||| |||| | ||| ||||| | |||||||| || || || Sbjct: 112 gaggttatccagaagaagagaactgaaaggccagaagttagagatgctgctagggaggct 171 Query: 358 gctcttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaag 417 ||||| ||||| |||||||| | ||||||||||| |||||||||||||||||||||||| Sbjct: 172 gctctccgtgaaatcaaggaaaggatcaagaagacaaaggatgagaagaaggccaagaag 231 Query: 418 gcagaggtg 426 ||||||||| Sbjct: 232 gcagaggtg 240
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 129 bits (65), Expect = 1e-26 Identities = 113/129 (87%) Strand = Plus / Plus Query: 237 caagaagaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacact 296 ||||||||||||||||||||||||||| |||||||| ||||| || |||||||| || || Sbjct: 6898176 caagaagaggcgccgcaccaccaagaaaccgtactcccggtctatagttggtgctaccct 6898235 Query: 297 ggaagttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagc 356 ||||| |||||||||||||| ||||||||||| || || |||||||| || || ||| | Sbjct: 6898236 tgaagtcatccagaagaagagagctgagaagccagaggttcgtgatgcagcaagggaatc 6898295 Query: 357 cgctcttcg 365 ||||||||| Sbjct: 6898296 cgctcttcg 6898304 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Plus Query: 112 caggttttcctctttgccaactcaaaatgcaagcgctacttccacaaccgcctgaagcct 171 ||||| ||||| ||| | ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 6897772 caggtgttcctgttttcaaactcgaagtgcaagcgctacttccacaaccgtctgaagcca 6897831 Query: 172 gcaaagctttgctggacagcaatgtacaggaagcagcacaagaagg 217 || |||||| |||||||| |||||||| |||||||||||||||| Sbjct: 6897832 gccaagcttacatggacagccatgtacagaaagcagcacaagaagg 6897877 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 365 gtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcagagg 424 |||||||||||||||||||||||||||| ||||| |||||||| || ||||||||||||| Sbjct: 6898636 gtgagatcaaggagcgcatcaagaagacaaaggacgagaagaaagcgaagaaggcagagg 6898695 Query: 425 tg 426 || Sbjct: 6898696 tg 6898697 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 43 gagctttgccgttttagcggccagaagatttacccagggaagggtatcaggttcattcgt 102 ||||| |||||||| |||||| |||||||||||||||||||||||||| ||||| ||| Sbjct: 6897619 gagctgtgccgtttcagcggcgccaagatttacccagggaagggtatcagattcatccgt 6897678 Query: 103 tcagattcacaggt 116 |||| || ||||| Sbjct: 6897679 gcagactcccaggt 6897692
>dbj|AP004572.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0668C05 Length = 142081 Score = 129 bits (65), Expect = 1e-26 Identities = 113/129 (87%) Strand = Plus / Plus Query: 237 caagaagaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacact 296 ||||||||||||||||||||||||||| |||||||| ||||| || |||||||| || || Sbjct: 21991 caagaagaggcgccgcaccaccaagaaaccgtactcccggtctatagttggtgctaccct 22050 Query: 297 ggaagttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagc 356 ||||| |||||||||||||| ||||||||||| || || |||||||| || || ||| | Sbjct: 22051 tgaagtcatccagaagaagagagctgagaagccagaggttcgtgatgcagcaagggaatc 22110 Query: 357 cgctcttcg 365 ||||||||| Sbjct: 22111 cgctcttcg 22119 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Plus Query: 112 caggttttcctctttgccaactcaaaatgcaagcgctacttccacaaccgcctgaagcct 171 ||||| ||||| ||| | ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 21587 caggtgttcctgttttcaaactcgaagtgcaagcgctacttccacaaccgtctgaagcca 21646 Query: 172 gcaaagctttgctggacagcaatgtacaggaagcagcacaagaagg 217 || |||||| |||||||| |||||||| |||||||||||||||| Sbjct: 21647 gccaagcttacatggacagccatgtacagaaagcagcacaagaagg 21692 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 365 gtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcagagg 424 |||||||||||||||||||||||||||| ||||| |||||||| || ||||||||||||| Sbjct: 22451 gtgagatcaaggagcgcatcaagaagacaaaggacgagaagaaagcgaagaaggcagagg 22510 Query: 425 tg 426 || Sbjct: 22511 tg 22512 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 43 gagctttgccgttttagcggccagaagatttacccagggaagggtatcaggttcattcgt 102 ||||| |||||||| |||||| |||||||||||||||||||||||||| ||||| ||| Sbjct: 21434 gagctgtgccgtttcagcggcgccaagatttacccagggaagggtatcagattcatccgt 21493 Query: 103 tcagattcacaggt 116 |||| || ||||| Sbjct: 21494 gcagactcccaggt 21507
>emb|AJ225027.1|CAR225027 Cicer arietinum mRNA for ribosomal protein L24 Length = 697 Score = 129 bits (65), Expect = 1e-26 Identities = 155/185 (83%) Strand = Plus / Plus Query: 238 aagaagaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacactg 297 ||||||||||| || | ||||| ||||| ||||| |||| ||||||||||| || || Sbjct: 237 aagaagaggcgtcgtgctaccaaaaagccatactctaggtccattgttggtgctactttg 296 Query: 298 gaagttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagcc 357 ||||| || |||||||| || |||||||||||||||| |||||||| || || ||||| Sbjct: 297 gaagtcattcagaagaaaagaactgagaagcctgaagttcgtgatgccgctagggaagct 356 Query: 358 gctcttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaag 417 ||||||||||| || |||||| | |||||||| || |||||||||||||| |||||||| Sbjct: 357 gctcttcgtgaaattaaggagagaatcaagaaaactaaggatgagaagaaagccaagaaa 416 Query: 418 gcaga 422 ||||| Sbjct: 417 gcaga 421 Score = 71.9 bits (36), Expect = 3e-09 Identities = 153/192 (79%) Strand = Plus / Plus Query: 28 atggttctgaagactgagctttgccgttttagcggccagaagatttacccagggaagggt 87 |||||||| |||||||| |||||||| || || || ||||| |||||||| | || Sbjct: 27 atggttctcaagactgaactttgccgattcagtggtgcaaagatctacccaggaagagga 86 Query: 88 atcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaatgcaagcgc 147 ||||| || |||||| ||||| ||||||||||| |||| |||||||||||||| | Sbjct: 87 atcagatttattcgtggtgattctcaggttttcctgtttgttaactcaaaatgcaaaagg 146 Query: 148 tacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtacaggaagcag 207 || ||||||||||| |||||||| | |||||| |||||| || |||| ||||||||| Sbjct: 147 tatttccacaaccgtttgaagccttcgaagcttacctggactgccatgttcaggaagcaa 206 Query: 208 cacaagaaggac 219 || || |||||| Sbjct: 207 cataaaaaggac 218
>dbj|AP003740.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_B03 Length = 108992 Score = 129 bits (65), Expect = 1e-26 Identities = 113/129 (87%) Strand = Plus / Plus Query: 237 caagaagaggcgccgcaccaccaagaagccgtactcacggtcgattgttggtgccacact 296 ||||||||||||||||||||||||||| |||||||| ||||| || |||||||| || || Sbjct: 54431 caagaagaggcgccgcaccaccaagaaaccgtactcccggtctatagttggtgctaccct 54490 Query: 297 ggaagttatccagaagaagagggctgagaagcctgaagtccgtgatgctgccagagaagc 356 ||||| |||||||||||||| ||||||||||| || || |||||||| || || ||| | Sbjct: 54491 tgaagtcatccagaagaagagagctgagaagccagaggttcgtgatgcagcaagggaatc 54550 Query: 357 cgctcttcg 365 ||||||||| Sbjct: 54551 cgctcttcg 54559 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Plus Query: 112 caggttttcctctttgccaactcaaaatgcaagcgctacttccacaaccgcctgaagcct 171 ||||| ||||| ||| | ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 54027 caggtgttcctgttttcaaactcgaagtgcaagcgctacttccacaaccgtctgaagcca 54086 Query: 172 gcaaagctttgctggacagcaatgtacaggaagcagcacaagaagg 217 || |||||| |||||||| |||||||| |||||||||||||||| Sbjct: 54087 gccaagcttacatggacagccatgtacagaaagcagcacaagaagg 54132 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 365 gtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcagagg 424 |||||||||||||||||||||||||||| ||||| |||||||| || ||||||||||||| Sbjct: 54891 gtgagatcaaggagcgcatcaagaagacaaaggacgagaagaaagcgaagaaggcagagg 54950 Query: 425 tg 426 || Sbjct: 54951 tg 54952 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 43 gagctttgccgttttagcggccagaagatttacccagggaagggtatcaggttcattcgt 102 ||||| |||||||| |||||| |||||||||||||||||||||||||| ||||| ||| Sbjct: 53874 gagctgtgccgtttcagcggcgccaagatttacccagggaagggtatcagattcatccgt 53933 Query: 103 tcagattcacaggt 116 |||| || ||||| Sbjct: 53934 gcagactcccaggt 53947
>gb|DQ268857.1| Solanum tuberosum clone 174B08 ribosomal protein L24-like protein mRNA, complete cds Length = 706 Score = 127 bits (64), Expect = 5e-26 Identities = 130/152 (85%) Strand = Plus / Plus Query: 67 aagatttacccagggaagggtatcaggttcattcgttcagattcacaggttttcctcttt 126 ||||| ||||| |||| ||| ||||| || ||||| |||||||| ||||| ||||| ||| Sbjct: 87 aagatataccctgggaggggaatcagatttattcgatcagattctcaggtgttcctattt 146 Query: 127 gccaactcaaaatgcaagcgctacttccacaaccgcctgaagcctgcaaagctttgctgg 186 | ||||||||| ||||| | |||||||||||||||||||||||| | |||||| ||| Sbjct: 147 gtcaactcaaagtgcaaacattacttccacaaccgcctgaagccttccaagcttacatgg 206 Query: 187 acagcaatgtacaggaagcagcacaagaagga 218 || || |||||||||||||||||||||||||| Sbjct: 207 actgccatgtacaggaagcagcacaagaagga 238 Score = 115 bits (58), Expect = 2e-22 Identities = 145/174 (83%) Strand = Plus / Plus Query: 254 ccaccaagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaaga 313 |||| ||||| || ||||| |||| ||||| ||||| || |||| || |||||||||| Sbjct: 274 ccacaaagaaaccttactctaggtccattgtgggtgcaaccttggaggtaatccagaaga 333 Query: 314 agagggctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatca 373 |||| ||||| | ||| ||||| || ||||||||||| || || ||||||||||| |||| Sbjct: 334 agagagctgaaaggccagaagttcgagatgctgccagggaggctgctcttcgtgaaatca 393 Query: 374 aggagcgcatcaagaagaccaaggatgagaagaaggccaagaaggcagaggtga 427 |||| | |||||||| || ||||| || ||||||||||||||||||||||||| Sbjct: 394 aggaaagaatcaagaaaacaaaggacgaaaagaaggccaagaaggcagaggtga 447
>gb|AY310767.1| Nicotiana benthamiana clone 7-269 unknown mRNA Length = 375 Score = 125 bits (63), Expect = 2e-25 Identities = 235/291 (80%), Gaps = 1/291 (0%) Strand = Plus / Plus Query: 88 atcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaatgcaagcgc 147 ||||| || |||||||||||||| ||||| ||||| ||| ||||||||||||||| || Sbjct: 68 atcagatttattcgttcagattctcaggtgttcctatttctcaactcaaaatgcaaacgg 127 Query: 148 tacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtacaggaagcag 207 ||||| ||||| |||||||||||| | || ||| |||||||| ||||||||||||||| Sbjct: 128 tactttcacaatcgcctgaagccttccaaacttacttggacagctatgtacaggaagcag 187 Query: 208 cacaagaaggacatccatgctgaggctgccaagaagaggcgccgcaccaccaagaagccg 267 ||||||||||| || || |||| ||||||||||| || | || |||||||| Sbjct: 188 cacaagaaggatattgcacaagaagctgttaagaagaggcgacgtgcaacaaagaagcct 247 Query: 268 tactcacggtcgattgttggtgccacactggaagttatccagaagaagagggctgagaag 327 ||||| |||| ||||| ||||| || ||||| ||||||||||||||||| |||| | | Sbjct: 248 tactccaggtccattgtgggtgcaaccctggaggttatccagaagaagagaactgaaagg 307 Query: 328 cctgaagtccgtgatgctgccagagaagccgctctt-cgtgagatcaagga 377 || ||||| | |||||||| || || || |||||| ||||| |||||||| Sbjct: 308 ccagaagttagagatgctgctagggaggctgctcttccgtgaaatcaagga 358
>emb|AL132969.2|ATF8J2 Arabidopsis thaliana DNA chromosome 3, BAC clone F8J2 Length = 99814 Score = 113 bits (57), Expect = 8e-22 Identities = 96/109 (88%) Strand = Plus / Minus Query: 254 ccaccaagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaaga 313 ||||||||||||| |||||| |||| ||||||||||| || ||||||| || ||||||| Sbjct: 84487 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 84428 Query: 314 agagggctgagaagcctgaagtccgtgatgctgccagagaagccgctct 362 |||| ||||||||||||||||| |||||||| ||||| ||||| ||||| Sbjct: 84427 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctct 84379 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 365 gtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaagg 418 ||||||||||||| | ||||| |||||||| ||||| |||||||| ||||||| Sbjct: 84283 gtgagatcaaggaaagaatcaaaaagaccaaagatgaaaagaaggctaagaagg 84230 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Minus Query: 43 gagctttgccgttttagcggccagaagatttacccagg 80 |||||||| ||||| || || ||||||||||||||||| Sbjct: 84899 gagctttgtcgtttcagtggacagaagatttacccagg 84862
>gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1119_H02, complete sequence Length = 138584 Score = 95.6 bits (48), Expect = 2e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 111 acaggttttcctctttgccaactcaaaatgcaagcgctacttccacaaccgcctgaagcc 170 |||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 acaggtcttcctttttgcaaactcaaaatgcaagcgctacttccacaaccgcctgaagcc 1 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 43 gagctttgccgttttagcggccagaagatttacccagggaagggtatcaggttcattcgt 102 ||||||||||||||||| ||||||||||| || ||||||||||| || | || |||||| Sbjct: 215 gagctttgccgttttagtggccagaagatatatccagggaagggcattcgctttattcgt 156 Query: 103 tcagattcacaggt 116 | ||||||||||| Sbjct: 155 gctgattcacaggt 142
>dbj|AP006101.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09A07, TM0181, complete sequence Length = 185320 Score = 89.7 bits (45), Expect = 1e-14 Identities = 114/137 (83%) Strand = Plus / Plus Query: 229 gaggctgccaagaagaggcgccgcaccaccaagaagccgtactcacggtcgattgttggt 288 |||||||| | ||||| ||| ||| | ||||| ||||| ||||| |||| ||||||||| Sbjct: 61475 gaggctgcgaggaagaagcgtcgctctaccaaaaagccttactccaggtcaattgttggt 61534 Query: 289 gccacactggaagttatccagaagaagagggctgagaagcctgaagtccgtgatgctgcc 348 || ||| |||||||||| ||||| | ||| |||| |||||||| || || |||||||| Sbjct: 61535 gctacattggaagttattcagaaaaggagaactgaaaagcctgaggttcgagatgctgct 61594 Query: 349 agagaagccgctcttcg 365 ||||||||||||||||| Sbjct: 61595 agagaagccgctcttcg 61611 Score = 48.1 bits (24), Expect = 0.039 Identities = 36/40 (90%) Strand = Plus / Plus Query: 383 tcaagaagaccaaggatgagaagaaggccaagaaggcaga 422 ||||||| || ||||||||||||| ||| ||||||||||| Sbjct: 61777 tcaagaaaacaaaggatgagaagagggcaaagaaggcaga 61816
>dbj|AP004955.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT19K21, TM0132, complete sequence Length = 59303 Score = 89.7 bits (45), Expect = 1e-14 Identities = 114/137 (83%) Strand = Plus / Plus Query: 229 gaggctgccaagaagaggcgccgcaccaccaagaagccgtactcacggtcgattgttggt 288 |||||||| | ||||| ||| ||| | ||||| ||||| ||||| |||| ||||||||| Sbjct: 40955 gaggctgcgaggaagaagcgtcgctctaccaaaaagccttactccaggtcaattgttggt 41014 Query: 289 gccacactggaagttatccagaagaagagggctgagaagcctgaagtccgtgatgctgcc 348 || ||| |||||||||| ||||| | ||| |||| |||||||| || || |||||||| Sbjct: 41015 gctacattggaagttattcagaaaaggagaactgaaaagcctgaggttcgagatgctgct 41074 Query: 349 agagaagccgctcttcg 365 ||||||||||||||||| Sbjct: 41075 agagaagccgctcttcg 41091 Score = 48.1 bits (24), Expect = 0.039 Identities = 36/40 (90%) Strand = Plus / Plus Query: 383 tcaagaagaccaaggatgagaagaaggccaagaaggcaga 422 ||||||| || ||||||||||||| ||| ||||||||||| Sbjct: 41257 tcaagaaaacaaaggatgagaagagggcaaagaaggcaga 41296
>gb|AC006919.6| Arabidopsis thaliana chromosome 2 clone F1O11 map g6825, complete sequence Length = 104364 Score = 83.8 bits (42), Expect = 7e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 259 aagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagagg 318 |||||||| |||||| |||||||||| ||||| || |||| ||||| ||||||||| | Sbjct: 99953 aagaagccttactcaaggtcgattgtcggtgctactttggaggttattcagaagaagcga 99894 Query: 319 gctgagaagcctgaagtccgtgatgctgccagagaagc 356 || |||||||||||||| |||||||| || |||||||| Sbjct: 99893 gcagagaagcctgaagttcgtgatgccgctagagaagc 99856 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 365 gtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaagg 418 |||||||||||||| | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 99753 gtgagatcaaggagagaatcaagaagaccaaggacgagaagaaggcaaagaagg 99700 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 175 aagctttgctggacagcaatgtacaggaagcagcacaagaagg 217 |||||||||||||| || |||||| | |||||||||||||||| Sbjct: 100125 aagctttgctggactgctatgtaccgaaagcagcacaagaagg 100083 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 39 gactgagctttgccgttttagcggccagaagatttaccc 77 ||||||||||||||| || || |||||||| |||||||| Sbjct: 100370 gactgagctttgccgattcagtggccagaaaatttaccc 100332
>gb|AC006282.4| Arabidopsis thaliana chromosome 2 clone F13K3 map g6825, complete sequence Length = 92376 Score = 83.8 bits (42), Expect = 7e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 259 aagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagagg 318 |||||||| |||||| |||||||||| ||||| || |||| ||||| ||||||||| | Sbjct: 2277 aagaagccttactcaaggtcgattgtcggtgctactttggaggttattcagaagaagcga 2218 Query: 319 gctgagaagcctgaagtccgtgatgctgccagagaagc 356 || |||||||||||||| |||||||| || |||||||| Sbjct: 2217 gcagagaagcctgaagttcgtgatgccgctagagaagc 2180 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 365 gtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggccaagaagg 418 |||||||||||||| | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 2077 gtgagatcaaggagagaatcaagaagaccaaggacgagaagaaggcaaagaagg 2024 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 175 aagctttgctggacagcaatgtacaggaagcagcacaagaagg 217 |||||||||||||| || |||||| | |||||||||||||||| Sbjct: 2449 aagctttgctggactgctatgtaccgaaagcagcacaagaagg 2407 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 39 gactgagctttgccgttttagcggccagaagatttaccc 77 ||||||||||||||| || || |||||||| |||||||| Sbjct: 2694 gactgagctttgccgattcagtggccagaaaatttaccc 2656
>emb|AJ617049.1| Nicotiana plumbaginifolia cDNA-AFLP fragment, clone Np221 Length = 322 Score = 71.9 bits (36), Expect = 3e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 340 gatgctgccagagaagccgctcttcgtgagatcaaggagcgcatcaagaagaccaaggat 399 |||||||| || || || ||||| ||||| |||||||| | ||||||||||| |||||| Sbjct: 322 gatgctgctagggaggctgctctccgtgaaatcaaggaaagaatcaagaagacaaaggat 263 Query: 400 gagaagaaggccaagaaggcagaggtga 427 || |||||||| ||||| |||||||||| Sbjct: 262 gaaaagaaggctaagaaagcagaggtga 235 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 478 aagggcccaaagcttggcggtggcggcgg 506 |||||||| ||||||||||| |||||||| Sbjct: 178 aagggccctaagcttggcggcggcggcgg 150
>gb|AC146788.13| Medicago truncatula clone mth2-11a6, complete sequence Length = 116349 Score = 67.9 bits (34), Expect = 4e-08 Identities = 91/110 (82%) Strand = Plus / Minus Query: 256 accaagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaag 315 ||||| ||||| |||||| |||| ||||||||||| || |||||||||| || |||||| Sbjct: 106479 accaaaaagccttactcaaggtccattgttggtgctactttggaagttattcaaaagaag 106420 Query: 316 agggctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcg 365 || | || ||||| || || || ||||||||||||||||| || ||||| Sbjct: 106419 agatcagaaaagccagaggttcgggatgctgccagagaagctgcccttcg 106370 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 385 aagaagaccaaggatgagaagaaggccaagaaggcaga 422 ||||| || ||||||||||||||||| ||||||||||| Sbjct: 106191 aagaaaacaaaggatgagaagaaggcgaagaaggcaga 106154 Score = 44.1 bits (22), Expect = 0.61 Identities = 85/106 (80%) Strand = Plus / Minus Query: 112 caggttttcctctttgccaactcaaaatgcaagcgctacttccacaaccgcctgaagcct 171 ||||||||||| |||| |||||| ||||| || | || ||||||||| ||||||| Sbjct: 107342 caggttttcctgtttgtcaactcgaaatgtaaaaggtatttccacaacaagttgaagccc 107283 Query: 172 gcaaagctttgctggacagcaatgtacaggaagcagcacaagaagg 217 |||||||| ||||| || ||||| |||||||| |||||||||| Sbjct: 107282 tcaaagcttacatggactgccatgtataggaagcaacacaagaagg 107237
>gb|AC139525.3| Medicago truncatula clone mth2-26o22, complete sequence Length = 103039 Score = 67.9 bits (34), Expect = 4e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 256 accaagaagccgtactcacggtcgattgttggtgccacactggaagttatccagaagaag 315 ||||| ||||| |||||| |||| ||||||||||| || |||||||||| || |||||| Sbjct: 13266 accaaaaagccttactcaaggtccattgttggtgctactttggaagttattcaaaagaag 13325 Query: 316 agggctgagaagcctgaagtccgtgatgctgccagagaagccgctcttcg 365 || | || ||||| || || || ||||||||||||||||| || ||||| Sbjct: 13326 agatcagaaaagccagaggttcgggatgctgccagagaagctgcccttcg 13375 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 385 aagaagaccaaggatgagaagaaggccaagaaggcaga 422 ||||| || ||||||||||||||||| ||||||||||| Sbjct: 13554 aagaaaacaaaggatgagaagaaggcgaagaaggcaga 13591 Score = 44.1 bits (22), Expect = 0.61 Identities = 85/106 (80%) Strand = Plus / Plus Query: 112 caggttttcctctttgccaactcaaaatgcaagcgctacttccacaaccgcctgaagcct 171 ||||||||||| |||| |||||| ||||| || | || ||||||||| ||||||| Sbjct: 12403 caggttttcctgtttgtcaactcgaaatgtaaaaggtatttccacaacaagttgaagccc 12462 Query: 172 gcaaagctttgctggacagcaatgtacaggaagcagcacaagaagg 217 |||||||| ||||| || ||||| |||||||| |||||||||| Sbjct: 12463 tcaaagcttacatggactgccatgtataggaagcaacacaagaagg 12508
>dbj|AK221088.1| Arabidopsis thaliana mRNA for 60S ribosomal protein - like, partial cds, clone: RAFL22-82-K11 Length = 343 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 352 gaagccgctcttcgtgagatcaaggagcgcatcaagaagaccaaggatgagaagaaggcc 411 ||||| ||||| |||||||||||||| | ||||| |||||||| ||||| |||||||| Sbjct: 2 gaagctgctctgcgtgagatcaaggaaagaatcaaaaagaccaaagatgaaaagaaggct 61 Query: 412 aagaagg 418 ||||||| Sbjct: 62 aagaagg 68
>gb|AC090805.7| Homo sapiens chromosome 8, clone RP11-55A15, complete sequence Length = 97951 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 400 gagaagaaggccaagaaggcagag 423 |||||||||||||||||||||||| Sbjct: 83598 gagaagaaggccaagaaggcagag 83575
>gb|DQ401085.1| Chlamydomonas sp. ICE-L 60S ribosomal protein mRNA, complete cds Length = 634 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Plus Query: 307 cagaagaagagggctgagaagcctgaagtccg 338 |||| ||||||||||||||||||||| ||||| Sbjct: 310 cagaggaagagggctgagaagcctgaggtccg 341
>ref|XM_504493.1| Yarrowia lipolytica CLIB122, YALI0E28153g predicted mRNA Length = 5574 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 381 catcaagaagaccaaggatgagaagaaggccaaga 415 |||||| ||||| |||| ||||||||||||||||| Sbjct: 4533 catcaaaaagactaaggctgagaagaaggccaaga 4567
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 381 catcaagaagaccaaggatgagaagaaggccaaga 415 |||||| ||||| |||| ||||||||||||||||| Sbjct: 3325540 catcaaaaagactaaggctgagaagaaggccaaga 3325574 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 3019373 gagaagaaggccaagaaggc 3019354
>ref|NM_014303.2| Homo sapiens pescadillo homolog 1, containing BRCT domain (zebrafish) (PES1), mRNA Length = 2279 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 tgagaagaaggccaagaaggca 420 |||||||||||||||||||||| Sbjct: 1808 tgagaagaaggccaagaaggca 1829
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 384 caagaagaccaaggatgagaag 405 |||||||||||||||||||||| Sbjct: 658998 caagaagaccaaggatgagaag 659019
>ref|XM_811165.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510565.50) partial mRNA Length = 1818 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Plus Query: 367 gagatcaaggagcgcatcaagaagaccaag 396 ||||||||| ||||||||||||||| |||| Sbjct: 150 gagatcaagaagcgcatcaagaagatcaag 179
>gb|AC131249.43| Medicago truncatula clone mth2-8p18, complete sequence Length = 104866 Score = 44.1 bits (22), Expect = 0.61 Identities = 40/46 (86%) Strand = Plus / Minus Query: 323 agaagcctgaagtccgtgatgctgccagagaagccgctcttcgtga 368 |||||||||| || || |||||||| || ||||| ||||||||||| Sbjct: 48038 agaagcctgaggttcgagatgctgctagggaagctgctcttcgtga 47993
>gb|BC018848.1| Homo sapiens cDNA clone IMAGE:3141182, **** WARNING: chimeric clone **** Length = 3082 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 tgagaagaaggccaagaaggca 420 |||||||||||||||||||||| Sbjct: 641 tgagaagaaggccaagaaggca 662
>emb|AL360089.13| Human DNA sequence from clone RP11-284P20 on chromosome 9 Contains the 3' end of a novel gene, a pescadillo homolog 1, containing BRCT domain (zebrafish) (PES1) pseudogene, a novel gene and a ribosomal protein L3 (RPL3) pseudogene, complete sequence Length = 129263 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 tgagaagaaggccaagaaggca 420 |||||||||||||||||||||| Sbjct: 53579 tgagaagaaggccaagaaggca 53600
>dbj|AK125778.1| Homo sapiens cDNA FLJ43790 fis, clone TESTI2053399, moderately similar to Homo sapiens pescadillo 1, containing BRCT domain (zebrafish) (PES1) Length = 1732 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 tgagaagaaggccaagaaggca 420 |||||||||||||||||||||| Sbjct: 1289 tgagaagaaggccaagaaggca 1310
>dbj|AK127185.1| Homo sapiens cDNA FLJ45250 fis, clone BRHIP2008756, moderately similar to Homo sapiens pescadillo 1, containing BRCT domain (zebrafish) (PES1) Length = 2691 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 tgagaagaaggccaagaaggca 420 |||||||||||||||||||||| Sbjct: 2240 tgagaagaaggccaagaaggca 2261
>emb|CR620678.1| full-length cDNA clone CS0DA004YI10 of Neuroblastoma of Homo sapiens (human) Length = 2144 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 tgagaagaaggccaagaaggca 420 |||||||||||||||||||||| Sbjct: 1730 tgagaagaaggccaagaaggca 1751
>emb|CR620248.1| full-length cDNA clone CS0DG005YL14 of B cells (Ramos cell line) of Homo sapiens (human) Length = 2206 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 tgagaagaaggccaagaaggca 420 |||||||||||||||||||||| Sbjct: 1756 tgagaagaaggccaagaaggca 1777
>emb|CR611212.1| full-length cDNA clone CS0DE011YP13 of Placenta of Homo sapiens (human) Length = 2170 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 tgagaagaaggccaagaaggca 420 |||||||||||||||||||||| Sbjct: 1772 tgagaagaaggccaagaaggca 1793
>emb|CR608268.1| full-length cDNA clone CS0DI042YA02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2207 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 tgagaagaaggccaagaaggca 420 |||||||||||||||||||||| Sbjct: 1781 tgagaagaaggccaagaaggca 1802
>emb|CR608043.1| full-length cDNA clone CS0DF016YB22 of Fetal brain of Homo sapiens (human) Length = 2196 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 tgagaagaaggccaagaaggca 420 |||||||||||||||||||||| Sbjct: 1781 tgagaagaaggccaagaaggca 1802
>emb|CR607661.1| full-length cDNA clone CS0DA001YJ13 of Neuroblastoma of Homo sapiens (human) Length = 2239 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 tgagaagaaggccaagaaggca 420 |||||||||||||||||||||| Sbjct: 1788 tgagaagaaggccaagaaggca 1809
>emb|CR607111.1| full-length cDNA clone CS0DA005YI24 of Neuroblastoma of Homo sapiens (human) Length = 2194 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 tgagaagaaggccaagaaggca 420 |||||||||||||||||||||| Sbjct: 1782 tgagaagaaggccaagaaggca 1803
>dbj|AK096320.1| Homo sapiens cDNA FLJ39001 fis, clone NT2RI2022584, highly similar to Homo sapiens pescadillo mRNA Length = 2705 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 tgagaagaaggccaagaaggca 420 |||||||||||||||||||||| Sbjct: 2258 tgagaagaaggccaagaaggca 2279
>emb|CR598932.1| full-length cDNA clone CS0DI057YB08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2170 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 tgagaagaaggccaagaaggca 420 |||||||||||||||||||||| Sbjct: 1747 tgagaagaaggccaagaaggca 1768
>emb|CR597817.1| full-length cDNA clone CS0DI016YA07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1746 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 tgagaagaaggccaagaaggca 420 |||||||||||||||||||||| Sbjct: 1296 tgagaagaaggccaagaaggca 1317
>emb|CR597567.1| full-length cDNA clone CS0DA008YM01 of Neuroblastoma of Homo sapiens (human) Length = 2176 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 tgagaagaaggccaagaaggca 420 |||||||||||||||||||||| Sbjct: 1744 tgagaagaaggccaagaaggca 1765
>emb|BX571983.11| Zebrafish DNA sequence from clone DKEY-18M7 in linkage group 11, complete sequence Length = 248929 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 233 ctgccaagaagaggcgccgcac 254 |||||||||||||||||||||| Sbjct: 208927 ctgccaagaagaggcgccgcac 208906
>dbj|AB029901.2| Homo sapiens CST gene for cerebroside sulfotransferase, complete cds Length = 25926 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 tgagaagaaggccaagaaggca 420 |||||||||||||||||||||| Sbjct: 3266 tgagaagaaggccaagaaggca 3287
>gb|AC005006.2|AC005006 Homo sapiens clone RP1-56J10, complete sequence Length = 101720 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 399 tgagaagaaggccaagaaggca 420 |||||||||||||||||||||| Sbjct: 26361 tgagaagaaggccaagaaggca 26340
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Plus Query: 367 gagatcaaggagcgcatcaagaagaccaag 396 |||||| ||| ||||||||||||||||||| Sbjct: 6961856 gagatcgaggcgcgcatcaagaagaccaag 6961885
>gb|AY893015.1| Synthetic construct Homo sapiens clone FLH119699.01L pescadillo-like 1 containing BRCT domain (PES1) mRNA, partial cds Length = 1767 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 tgagaagaaggccaagaaggca 420 |||||||||||||||||||||| Sbjct: 1734 tgagaagaaggccaagaaggca 1755
>gb|AY890547.1| Synthetic construct Homo sapiens clone FLH119703.01X pescadillo-like 1 containing BRCT domain (PES1) mRNA, complete cds Length = 1767 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 tgagaagaaggccaagaaggca 420 |||||||||||||||||||||| Sbjct: 1734 tgagaagaaggccaagaaggca 1755
>gb|BC032489.1| Homo sapiens pescadillo homolog 1, containing BRCT domain (zebrafish), mRNA (cDNA clone MGC:40305 IMAGE:5416478), complete cds Length = 2285 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 tgagaagaaggccaagaaggca 420 |||||||||||||||||||||| Sbjct: 1798 tgagaagaaggccaagaaggca 1819
>emb|CR456539.1| Homo sapiens PES1 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.PES1) Length = 1988 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 tgagaagaaggccaagaaggca 420 |||||||||||||||||||||| Sbjct: 1744 tgagaagaaggccaagaaggca 1765
>emb|AJ495850.1|PLI495850 Paracentrotus lividus partial dnmt1 gene for DNA methyltransferase, exon 17 Length = 581 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 393 caaggatgagaagaaggccaagaagg 418 |||||||||||||||||| ||||||| Sbjct: 512 caaggatgagaagaaggctaagaagg 537
>gb|U78310.1|HSU78310 Homo sapiens pescadillo mRNA, complete cds Length = 2257 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 tgagaagaaggccaagaaggca 420 |||||||||||||||||||||| Sbjct: 1792 tgagaagaaggccaagaaggca 1813
>emb|Z50183.1|PLDNACMT P.lividus mRNA for DNA (cytosine-5-)-methyltransferase Length = 7170 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 393 caaggatgagaagaaggccaagaagg 418 |||||||||||||||||| ||||||| Sbjct: 2188 caaggatgagaagaaggctaagaagg 2213
>ref|NM_053379.2| Rattus norvegicus doublecortin (Dcx), mRNA Length = 8814 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 atgagaagaaggccaagaagg 418 ||||||||||||||||||||| Sbjct: 143 atgagaagaaggccaagaagg 163
>gb|AY560329.1| Mus musculus doublecortin (Dcx) mRNA, complete cds Length = 2920 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 atgagaagaaggccaagaagg 418 ||||||||||||||||||||| Sbjct: 203 atgagaagaaggccaagaagg 223
>gb|AC184800.2| Pan troglodytes chromosome X clone PTB-18K16 map human ortholog p11.23, complete sequence Length = 142154 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 551 cctagccttgtttcttatcct 571 ||||||||||||||||||||| Sbjct: 42499 cctagccttgtttcttatcct 42519
>ref|NM_023868.1| Mus musculus ryanodine receptor 2, cardiac (Ryr2), mRNA Length = 14904 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 aggatgagaagaaggccaaga 415 ||||||||||||||||||||| Sbjct: 12859 aggatgagaagaaggccaaga 12839
>gb|BC056391.1| Mus musculus doublecortin, mRNA (cDNA clone MGC:73924 IMAGE:6855006), complete cds Length = 4011 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 atgagaagaaggccaagaagg 418 ||||||||||||||||||||| Sbjct: 208 atgagaagaaggccaagaagg 228
>gb|BC057010.1| Mus musculus doublecortin, mRNA (cDNA clone MGC:67049 IMAGE:6825750), complete cds Length = 4102 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 atgagaagaaggccaagaagg 418 ||||||||||||||||||||| Sbjct: 300 atgagaagaaggccaagaagg 320
>gb|BC062974.1| Mus musculus doublecortin, mRNA (cDNA clone MGC:61189 IMAGE:6825750), complete cds Length = 4102 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 atgagaagaaggccaagaagg 418 ||||||||||||||||||||| Sbjct: 300 atgagaagaaggccaagaagg 320
>emb|CR701428.2|CNS0G468 Tetraodon nigroviridis full-length cDNA Length = 528 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 614 gaatttgcaccttttctgtga 634 ||||||||||||||||||||| Sbjct: 251 gaatttgcaccttttctgtga 231
>emb|CR685071.2|CNS0FRJV Tetraodon nigroviridis full-length cDNA Length = 1377 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 614 gaatttgcaccttttctgtga 634 ||||||||||||||||||||| Sbjct: 1049 gaatttgcaccttttctgtga 1029
>emb|AL009172.1|HS212G6 Human DNA sequence from clone RP1-212G6 on chromosome Xp11.3-11.4 Contains the 5'end of the SYN1 gene for synapsin I, the PFC gene for properdin P factor (complement), the ELK1 member of the ETS oncogene family, the UTX gene for ubiquitously-expressed transcript, an SMS (spermine synthase) pseudogene, a novel gene (LOC286403) and three CpG islands, complete sequence Length = 156601 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 551 cctagccttgtttcttatcct 571 ||||||||||||||||||||| Sbjct: 95849 cctagccttgtttcttatcct 95869
>emb|CR936946.2| Medicago truncatula chromosome 5 clone mth2-77l22, COMPLETE SEQUENCE Length = 115705 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 340 gatgctgccagagaagccgctcttcgtga 368 ||||||||||||||||| | ||||||||| Sbjct: 61812 gatgctgccagagaagctgatcttcgtga 61840
>ref|XM_776765.1| PREDICTED: Strongylocentrotus purpuratus similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 (Sucrose nonfermenting protein 2-like 1) (HepA-related protein) (mharp) (LOC576458), mRNA Length = 1347 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 cctgaagcctgcaaagctttg 182 ||||||||||||||||||||| Sbjct: 1115 cctgaagcctgcaaagctttg 1095
>gb|AC159208.2| Mus musculus BAC clone RP23-152K15 from chromosome 13, complete sequence Length = 195714 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 aggatgagaagaaggccaaga 415 ||||||||||||||||||||| Sbjct: 71884 aggatgagaagaaggccaaga 71904
>emb|X83933.1|MMRNARYR2 M.musculus mRNA for ryanodine receptor type 2 Length = 3859 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 aggatgagaagaaggccaaga 415 ||||||||||||||||||||| Sbjct: 425 aggatgagaagaaggccaaga 405
>ref|NM_010025.2| Mus musculus doublecortin (Dcx), mRNA Length = 8982 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 atgagaagaaggccaagaagg 418 ||||||||||||||||||||| Sbjct: 315 atgagaagaaggccaagaagg 335
>gb|AC008830.7| Homo sapiens chromosome 5 clone CTD-2142G21, complete sequence Length = 140696 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 667 gatgagtttatttacaatgaa 687 ||||||||||||||||||||| Sbjct: 90215 gatgagtttatttacaatgaa 90235
>dbj|AK164119.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530035O19 product:doublecortin, full insert sequence Length = 3985 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 atgagaagaaggccaagaagg 418 ||||||||||||||||||||| Sbjct: 202 atgagaagaaggccaagaagg 222
>dbj|AK049050.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230095H06 product:doublecortin, full insert sequence Length = 3195 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 atgagaagaaggccaagaagg 418 ||||||||||||||||||||| Sbjct: 389 atgagaagaaggccaagaagg 409
>dbj|AK048410.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130058C09 product:doublecortin, full insert sequence Length = 2619 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 atgagaagaaggccaagaagg 418 ||||||||||||||||||||| Sbjct: 321 atgagaagaaggccaagaagg 341
>dbj|AK014264.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110080G17 product:doublecortin, full insert sequence Length = 1333 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 atgagaagaaggccaagaagg 418 ||||||||||||||||||||| Sbjct: 316 atgagaagaaggccaagaagg 336
>gb|AF155959.2| Rattus norvegicus neuronal migration protein doublecortin mRNA, complete cds Length = 8814 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 atgagaagaaggccaagaagg 418 ||||||||||||||||||||| Sbjct: 143 atgagaagaaggccaagaagg 163
>gb|AF295105.1|AF295105 Mus musculus cardiac Ca2+ release channel mRNA, complete cds Length = 14904 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 aggatgagaagaaggccaaga 415 ||||||||||||||||||||| Sbjct: 12859 aggatgagaagaaggccaaga 12839
>ref|XM_576940.1| PREDICTED: Rattus norvegicus similar to doublecortin isoform a (LOC501537), mRNA Length = 2315 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 atgagaagaaggccaagaagg 418 ||||||||||||||||||||| Sbjct: 335 atgagaagaaggccaagaagg 355
>emb|BX530055.9| Mouse DNA sequence from clone RP23-462G16 on chromosome X, complete sequence Length = 168373 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 398 atgagaagaaggccaagaagg 418 ||||||||||||||||||||| Sbjct: 138417 atgagaagaaggccaagaagg 138397
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 668 atgagtttatttacaatgaat 688 ||||||||||||||||||||| Sbjct: 32972 atgagtttatttacaatgaat 32952 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 gcggcggcaagcgttgaaag 519 |||||||||||||||||||| Sbjct: 3814158 gcggcggcaagcgttgaaag 3814177
>gb|AF045547.1|AF045547 Mus musculus doublecortin (Dcx) mRNA, complete cds Length = 1199 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 atgagaagaaggccaagaagg 418 ||||||||||||||||||||| Sbjct: 196 atgagaagaaggccaagaagg 216
>dbj|AB011678.1| Mus musculus mRNA for doublecortin, complete cds Length = 9113 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 atgagaagaaggccaagaagg 418 ||||||||||||||||||||| Sbjct: 411 atgagaagaaggccaagaagg 431
>ref|NM_111769.1| Arabidopsis thaliana unknown protein AT3G09350 mRNA, complete cds Length = 1466 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 cagagaagccgctcttcgtg 367 |||||||||||||||||||| Sbjct: 897 cagagaagccgctcttcgtg 916
>ref|XM_525640.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ30473 (LOC470257), mRNA Length = 1755 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 agaagaccaaggatgagaag 405 |||||||||||||||||||| Sbjct: 428 agaagaccaaggatgagaag 447
>ref|XM_518333.1| PREDICTED: Pan troglodytes similar to TNFalpha-inducible ATP-binding protein (LOC462543), mRNA Length = 2398 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 537 agaaggccaagaaggcagag 556
>ref|XM_517476.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA 6330415M09 (LOC461534), mRNA Length = 1972 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 236 gagaagaaggccaagaaggc 255
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 gaagcagcacaagaaggacatcca 224 |||||||||||||||| ||||||| Sbjct: 2052904 gaagcagcacaagaagaacatcca 2052881
>gb|AY601882.1| Chlamydomonas reinhardtii central pair complex 1 (CPC1) mRNA, complete cds Length = 6261 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 agcttggcggtggcggcggc 507 |||||||||||||||||||| Sbjct: 1156 agcttggcggtggcggcggc 1137
>gb|AY601881.1| Chlamydomonas reinhardtii central pair complex 1 (CPC1) gene, complete cds Length = 9716 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 agcttggcggtggcggcggc 507 |||||||||||||||||||| Sbjct: 2239 agcttggcggtggcggcggc 2220
>gb|AC100737.18| Mus musculus chromosome 7, clone RP24-360I22, complete sequence Length = 148090 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 gaagaccaaggatgagaaga 406 |||||||||||||||||||| Sbjct: 40503 gaagaccaaggatgagaaga 40522
>ref|XM_616231.2| PREDICTED: Bos taurus similar to doublecortin kinase 2 (LOC536110), mRNA Length = 3347 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 213 gagaagaaggccaagaaggc 232
>gb|AC091499.2| Drosophila melanogaster clone BACR33L22, complete sequence Length = 182105 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 caggaagcagcacaagaagg 217 |||||||||||||||||||| Sbjct: 1660 caggaagcagcacaagaagg 1641
>ref|XM_869267.1| PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family F, member 1 isoform b (LOC617082), mRNA Length = 1138 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 708 agaaggccaagaaggcagag 727
>ref|XM_603695.2| PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family F, member 1 isoform b (LOC525343), mRNA Length = 1705 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 398 agaaggccaagaaggcagag 417
>ref|XM_870850.1| PREDICTED: Bos taurus similar to Voltage-dependent calcium channel gamma-8 subunit (Neuronal voltage-gated calcium channel gamma-8 subunit) (LOC618518), mRNA Length = 927 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 ggcggtggcggcggcaagcg 512 |||||||||||||||||||| Sbjct: 16 ggcggtggcggcggcaagcg 35
>gb|AC115045.13| Mus musculus chromosome 6, clone RP24-315D19, complete sequence Length = 177917 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 615 aatttgcaccttttctgtga 634 |||||||||||||||||||| Sbjct: 102851 aatttgcaccttttctgtga 102870
>ref|NM_001040261.1| Homo sapiens doublecortin and CaM kinase-like 2 (DCAMKL2), transcript variant 2, mRNA Length = 3600 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 302 gagaagaaggccaagaaggc 321
>ref|NM_001040260.1| Homo sapiens doublecortin and CaM kinase-like 2 (DCAMKL2), transcript variant 1, mRNA Length = 3603 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 302 gagaagaaggccaagaaggc 321
>ref|XM_951811.1| Neurospora crassa OR74A hypothetical protein (NCU01698.1) partial mRNA Length = 189 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 tgctgaggctgccaagaaga 244 |||||||||||||||||||| Sbjct: 165 tgctgaggctgccaagaaga 184
>ref|XM_328136.1| Neurospora crassa OR74A hypothetical protein (NCU01698.1) partial mRNA Length = 189 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 tgctgaggctgccaagaaga 244 |||||||||||||||||||| Sbjct: 165 tgctgaggctgccaagaaga 184
>ref|NM_027539.3| Mus musculus doublecortin and CaM kinase-like 2 (Dcamkl2), mRNA Length = 4032 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 884 gagaagaaggccaagaaggc 903
>gb|L25599.1| Caenorhabditis elegans cosmid F54H12, complete sequence Length = 19168 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 14842 gagaagaaggccaagaaggc 14823
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 318 ggctgagaagcctgaagtccgtga 341 |||||||||||||||||| ||||| Sbjct: 495676 ggctgagaagcctgaagtgcgtga 495653
>ref|NM_001025091.1| Homo sapiens ATP-binding cassette, sub-family F (GCN20), member 1 (ABCF1), transcript variant 1, mRNA Length = 3474 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 751 agaaggccaagaaggcagag 770
>ref|NM_001090.2| Homo sapiens ATP-binding cassette, sub-family F (GCN20), member 1 (ABCF1), transcript variant 2, mRNA Length = 3360 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 751 agaaggccaagaaggcagag 770
>gb|AY190958.1| Drosophila virilis clone DVIF01_45_J10 (D1457) genomic sequence Length = 44255 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 acaggaagcagcacaagaag 216 |||||||||||||||||||| Sbjct: 32543 acaggaagcagcacaagaag 32562
>gb|AC147051.2| Mus musculus BAC clone RP23-90H22 from chromosome 8, complete sequence Length = 224213 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 cttgccctcttgaatttgca 622 |||||||||||||||||||| Sbjct: 25344 cttgccctcttgaatttgca 25363
>gb|AC136018.5| Mus musculus BAC clone RP24-125E6 from chromosome 7, complete sequence Length = 210491 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 615 aatttgcaccttttctgtga 634 |||||||||||||||||||| Sbjct: 83323 aatttgcaccttttctgtga 83342
>gb|DQ016670.1| Uncultured Actinomyces sp. clone 8.3.3 16S ribosomal RNA gene, partial sequence Length = 505 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 gttatccagaagaagagggc 320 |||||||||||||||||||| Sbjct: 128 gttatccagaagaagagggc 109
>gb|DQ016669.1| Uncultured Actinomyces sp. clone 8.2.3 16S ribosomal RNA gene, partial sequence Length = 505 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 gttatccagaagaagagggc 320 |||||||||||||||||||| Sbjct: 128 gttatccagaagaagagggc 109
>emb|BX950198.13| Zebrafish DNA sequence from clone CH211-214G3 in linkage group 24, complete sequence Length = 196308 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gccaagaagaggcgccgcac 254 |||||||||||||||||||| Sbjct: 78333 gccaagaagaggcgccgcac 78314
>ref|XM_539760.2| PREDICTED: Canis familiaris similar to doublecortin kinase 2 (LOC482642), mRNA Length = 2589 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 202 gagaagaaggccaagaaggc 221
>gb|AY496422.1| Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha (NFKBIA) gene, complete cds Length = 6194 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 gcctgcaaagctttgctgga 187 |||||||||||||||||||| Sbjct: 5409 gcctgcaaagctttgctgga 5390
>ref|XM_567099.1| Cryptococcus neoformans var. neoformans JEC21 ribosomal protein L35 (CNA07490) partial mRNA Length = 470 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 gaagcagcacaagaaggacatcca 224 |||||||||||||||| ||||||| Sbjct: 336 gaagcagcacaagaagaacatcca 359
>gb|AC129310.6| Mus musculus BAC clone RP24-348D18 from chromosome 8, complete sequence Length = 130946 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 cttgccctcttgaatttgca 622 |||||||||||||||||||| Sbjct: 90457 cttgccctcttgaatttgca 90476
>gb|AC132346.3| Mus musculus BAC clone RP24-179K8 from chromosome 3, complete sequence Length = 181261 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 55228 gagaagaaggccaagaaggc 55209
>ref|XM_532056.2| PREDICTED: Canis familiaris similar to ATP-binding cassette, sub-family F, member 1 (ATP-binding cassette 50) (TNF-alpha stimulated ABC protein) (LOC474826), mRNA Length = 2917 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 645 agaaggccaagaaggcagag 664
>gb|AC011436.7|ATAC011436 Arabidopsis thaliana chromosome III BAC F3L24 genomic sequence, complete sequence Length = 106688 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 cagagaagccgctcttcgtg 367 |||||||||||||||||||| Sbjct: 69326 cagagaagccgctcttcgtg 69345
>emb|BX927125.18| Zebrafish DNA sequence from clone CH211-122L24 in linkage group 2, complete sequence Length = 165489 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccaagaagaggcgccgcac 254 |||||||||||||||||||| Sbjct: 68943 gccaagaagaggcgccgcac 68962
>gb|AC111012.3| Mus musculus BAC clone RP24-146N3 from 8, complete sequence Length = 155637 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 cttgccctcttgaatttgca 622 |||||||||||||||||||| Sbjct: 46374 cttgccctcttgaatttgca 46393
>gb|AC109166.10| Mus musculus chromosome 7, clone RP23-310P1, complete sequence Length = 168878 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 615 aatttgcaccttttctgtga 634 |||||||||||||||||||| Sbjct: 153273 aatttgcaccttttctgtga 153292
>emb|CR376723.15| Zebrafish DNA sequence from clone DKEY-90N12 in linkage group 8, complete sequence Length = 213541 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gccaagaagaggcgccgcac 254 |||||||||||||||||||| Sbjct: 49929 gccaagaagaggcgccgcac 49910
>emb|BX119957.13| Human DNA sequence from clone DASS-182C6 on chromosome 6, complete sequence Length = 112118 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 9112 agaaggccaagaaggcagag 9131
>emb|BX000357.7| Human DNA sequence from clone DAQB-256B5 on chromosome 6 Contains the GNL1 gene for guanine nucleotide binding protein-like 1, the PRR3 gene for proline-rich polypeptide 3, the ABCF1 gene for ATP-binding cassette, sub-family F (GCN20), member 1 and 2 CpG islands, complete sequence Length = 64172 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 46019 agaaggccaagaaggcagag 46038
>emb|AL662825.5| Human DNA sequence from clone XXbac-98J21 on chromosome 6 contains the GNL1 gene for guanine nucleotide binding protein-like 1, the gene for CAT56 protein, the ABCF1 gene for ATP-binding cassette, subfamily F, member 1, the PPP1R10 gene for protein phosphatase 1, regulatory subunit 10, the 5' end of the MRPS18B gene for mitochondrial ribosomal protein S18B and three CpG islands, complete sequence Length = 81768 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 37847 agaaggccaagaaggcagag 37866
>emb|AL662800.4| Human DNA sequence from clone XXbac-249D20 on chromosome 6 contains the GNL1 gene for guanine nucleotide binding protein-like 1, the gene for CAT56 protein, the ABCF1 gene for ATP-binding cassette, subfamily F, member 1, the PPP1R10 gene for protein phosphatase 1, regulatory subunit 10, the MRPS18B gene for mitochondrial ribosomal protein S18B, two novel proteins, a prothymosin alpha (PTMA) pseudogene and four CpG islands, complete sequence Length = 151228 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 80672 agaaggccaagaaggcagag 80691
>ref|XM_504385.1| Yarrowia lipolytica CLIB122, YALI0E25201g predicted mRNA Length = 4068 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 1327 gagaagaaggccaagaaggc 1346
>emb|AL365509.8| Human DNA sequence from clone RP11-653O20 on chromosome 6 Contains part of a novel gene and the 3' end of the FOXO3A gene for forkhead box O3A, complete sequence Length = 61900 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 ttcctctttgccaactcaaa 137 |||||||||||||||||||| Sbjct: 52438 ttcctctttgccaactcaaa 52419
>ref|XM_781978.1| PREDICTED: Strongylocentrotus purpuratus similar to DNA topoisomerase II, alpha isozyme (LOC582001), mRNA Length = 3024 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 gaagaaggccaagaaggcag 421 |||||||||||||||||||| Sbjct: 2055 gaagaaggccaagaaggcag 2074
>emb|AL929028.29| Zebrafish DNA sequence from clone CH211-13F6 in linkage group 20, complete sequence Length = 182372 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccaagaagaggcgccgcac 254 |||||||||||||||||||| Sbjct: 29714 gccaagaagaggcgccgcac 29733
>gb|AE008871.1| Salmonella typhimurium LT2, section 175 of 220 of the complete genome Length = 20651 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 gcggcggcaagcgttgaaag 519 |||||||||||||||||||| Sbjct: 936 gcggcggcaagcgttgaaag 955
>gb|BC034488.2| Homo sapiens ATP-binding cassette, sub-family F (GCN20), member 1, transcript variant 1, mRNA (cDNA clone MGC:26501 IMAGE:4826422), complete cds Length = 3204 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 696 agaaggccaagaaggcagag 715
>emb|AL834498.1|HSM805609 Homo sapiens mRNA; cDNA DKFZp761I032 (from clone DKFZp761I032) Length = 3355 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 3 gagaagaaggccaagaaggc 22
>emb|AL513408.1|NC61D6 Neurospora crassa DNA linkage group II Cosmid clone 61D6 Length = 38848 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 tgctgaggctgccaagaaga 244 |||||||||||||||||||| Sbjct: 26692 tgctgaggctgccaagaaga 26673
>emb|BX571945.15| Zebrafish DNA sequence from clone DKEY-267I17 in linkage group 5, complete sequence Length = 192769 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 ctgccaagaagaggcgccgc 252 |||||||||||||||||||| Sbjct: 12264 ctgccaagaagaggcgccgc 12283
>emb|CR753328.11| Human DNA sequence from clone DADB-129D20 on chromosome 6, complete sequence Length = 105135 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 4713 agaaggccaagaaggcagag 4732
>emb|BX537261.7| Zebrafish DNA sequence from clone DKEY-73F6 in linkage group 14, complete sequence Length = 135268 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccaagaagaggcgccgcac 254 |||||||||||||||||||| Sbjct: 120373 gccaagaagaggcgccgcac 120392
>emb|CR759778.8| Human DNA sequence from clone DAMC-83F13 on chromosome 6, complete sequence Length = 88815 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 5223 agaaggccaagaaggcagag 5242
>emb|CR858735.1| Pongo pygmaeus mRNA; cDNA DKFZp459N0651 (from clone DKFZp459N0651) Length = 3373 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 481 gagaagaaggccaagaaggc 500
>gb|BC056921.1| Mus musculus doublecortin and CaM kinase-like 2, mRNA (cDNA clone MGC:66502 IMAGE:6822681), complete cds Length = 4032 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 884 gagaagaaggccaagaaggc 903
>emb|BX571942.11| Zebrafish DNA sequence from clone DKEY-240A24 in linkage group 11, complete sequence Length = 102110 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 ctgccaagaagaggcgccgc 252 |||||||||||||||||||| Sbjct: 53153 ctgccaagaagaggcgccgc 53134
>emb|BX322792.11| Zebrafish DNA sequence from clone CH211-261I17, complete sequence Length = 174226 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 ctgccaagaagaggcgccgc 252 |||||||||||||||||||| Sbjct: 166778 ctgccaagaagaggcgccgc 166759
>emb|BX321916.14| Zebrafish DNA sequence from clone DKEYP-57E9 in linkage group 20 Contains two CpG islands, complete sequence Length = 120807 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccaagaagaggcgccgcac 254 |||||||||||||||||||| Sbjct: 32668 gccaagaagaggcgccgcac 32687
>emb|BX957270.8| Zebrafish DNA sequence from clone DKEYP-14F10 in linkage group 4 Contains four CpG islands, complete sequence Length = 143792 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccaagaagaggcgccgcac 254 |||||||||||||||||||| Sbjct: 58890 gccaagaagaggcgccgcac 58909
>emb|BX247901.12| Zebrafish DNA sequence from clone CH211-206H4 in linkage group 4 Contains four CpG islands, complete sequence Length = 101223 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gccaagaagaggcgccgcac 254 |||||||||||||||||||| Sbjct: 57110 gccaagaagaggcgccgcac 57091
>emb|AL627088.7| Zebrafish DNA sequence from clone RP71-1D6 in linkage group 18 Contains a CpG island, complete sequence Length = 151446 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccaagaagaggcgccgcac 254 |||||||||||||||||||| Sbjct: 64222 gccaagaagaggcgccgcac 64241
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 381 catcaagaagaccaaggatgagaa 404 ||||||||||| |||||||||||| Sbjct: 5841427 catcaagaagaacaaggatgagaa 5841404
>gb|AC009879.8| Homo sapiens, clone RP11-346I3, complete sequence Length = 191352 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 aagttatccagaagaagagg 318 |||||||||||||||||||| Sbjct: 87974 aagttatccagaagaagagg 87955
>emb|AL832430.1|HSM803738 Homo sapiens mRNA; cDNA DKFZp762E013 (from clone DKFZp762E013) Length = 2690 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 181 agaaggccaagaaggcagag 200
>gb|AC008440.9| Homo sapiens chromosome 19 clone CTC-331H23, complete sequence Length = 169997 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 ggcggtggcggcggcaagcg 512 |||||||||||||||||||| Sbjct: 102850 ggcggtggcggcggcaagcg 102869
>dbj|AB210140.1| Pan troglodytes ABCF1 gene for ATP-binding cassette, sub-family F, member 1, complete cds, cell_line: Ericka Length = 21541 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 9332 agaaggccaagaaggcagag 9351
>dbj|AB210139.1| Pan troglodytes ABCF1 gene for ATP-binding cassette, sub-family F, member 1, complete cds, cell_line: Borie Length = 21541 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 9332 agaaggccaagaaggcagag 9351
>emb|BX640477.6| Zebrafish DNA sequence from clone DKEY-43N16 in linkage group 10, complete sequence Length = 258048 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 ctgccaagaagaggcgccgc 252 |||||||||||||||||||| Sbjct: 209365 ctgccaagaagaggcgccgc 209384
>dbj|AB202093.1| Homo sapiens ABCF1 gene for ATP-binding cassette, sub-family F (GCN20), member 1, complete cds Length = 21845 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 9669 agaaggccaagaaggcagag 9688
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 557 cttgtttcttatcctatcctacta 580 |||||||||||||| ||||||||| Sbjct: 54998 cttgtttcttatcccatcctacta 55021
>ref|NM_001009691.2| Rattus norvegicus similar to RIKEN cDNA 6330415M09 (predicted) (RGD1308384_predicted), mRNA Length = 3458 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 282 gagaagaaggccaagaaggc 301
>gb|AF322044.1| Malawimonas jakobiformis chaperonin subunit alpha gene, partial cds Length = 1949 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 caaggagcgcatcaagaaga 391 |||||||||||||||||||| Sbjct: 989 caaggagcgcatcaagaaga 1008
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 1211452 gagaagaaggccaagaaggc 1211433
>gb|AC105343.4| Homo sapiens BAC clone RP11-423J7 from 4, complete sequence Length = 155217 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 133024 gagaagaaggccaagaaggc 133043
>emb|BX663607.13| Zebrafish DNA sequence from clone DKEY-30P18 in linkage group 6, complete sequence Length = 216068 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccaagaagaggcgccgcac 254 |||||||||||||||||||| Sbjct: 126466 gccaagaagaggcgccgcac 126485
>gb|DP000043.1| Macaca mulatta target 106 genomic scaffold Length = 373358 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 gcatcaagaagaccaaggat 399 |||||||||||||||||||| Sbjct: 272511 gcatcaagaagaccaaggat 272492
>emb|BX323875.15| Zebrafish DNA sequence from clone CH211-135L21 in linkage group 17, complete sequence Length = 173617 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 ctgccaagaagaggcgccgc 252 |||||||||||||||||||| Sbjct: 157761 ctgccaagaagaggcgccgc 157780
>emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in linkage group 15, complete sequence Length = 134752 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 ctgccaagaagaggcgccgc 252 |||||||||||||||||||| Sbjct: 43692 ctgccaagaagaggcgccgc 43711
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 367 gagatcaaggagcgcatcaagaag 390 |||||| ||||||||||||||||| Sbjct: 909006 gagatccaggagcgcatcaagaag 908983
>emb|BX927220.8| Human DNA sequence from clone DAMA-199F12 on chromosome 6, complete sequence Length = 82724 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 68621 agaaggccaagaaggcagag 68640
>emb|BX571832.5| Zebrafish DNA sequence from clone DKEY-256O13 in linkage group 17, complete sequence Length = 109705 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccaagaagaggcgccgcac 254 |||||||||||||||||||| Sbjct: 31 gccaagaagaggcgccgcac 50
>gb|AC002472.8| Homo sapiens Chromosome 22q11.2 PAC Clone p_n5 In BCRL2-GGT Region, complete sequence Length = 147086 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 agaagaccaaggatgagaag 405 |||||||||||||||||||| Sbjct: 11550 agaagaccaaggatgagaag 11569
>gb|AC002470.17| Homo sapiens Chromosome 22q11.2 BAC Clone b135h6 In BCRL2-GGT Region, complete sequence Length = 235395 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 agaagaccaaggatgagaag 405 |||||||||||||||||||| Sbjct: 203054 agaagaccaaggatgagaag 203073
>dbj|AK049179.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330011I05 product:hypothetical Eukaryotic protein kinase/Doublecortin containing protein, full insert sequence Length = 3487 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 368 gagaagaaggccaagaaggc 387
>dbj|AK049126.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330005E20 product:similar to SERINE/THREONINE-PROTEIN KINASE DCAMKL1 (EC 2.7.1.-) (DOUBLECORTIN- LIKE AND CAM KINASE-LIKE 1) [Homo sapiens], full insert sequence Length = 2064 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 406 gagaagaaggccaagaaggc 425
>ref|NM_066336.2| Caenorhabditis elegans F54H12.6 (F54H12.6) mRNA, complete cds Length = 809 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 459 gagaagaaggccaagaaggc 478
>gb|AE003821.4| Drosophila melanogaster chromosome 2R, section 29 of 73 of the complete sequence Length = 294168 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 caggaagcagcacaagaagg 217 |||||||||||||||||||| Sbjct: 216743 caggaagcagcacaagaagg 216724
>emb|BX323822.7| Zebrafish DNA sequence from clone DKEY-46C2 in linkage group 19, complete sequence Length = 204327 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 ctgccaagaagaggcgccgc 252 |||||||||||||||||||| Sbjct: 177338 ctgccaagaagaggcgccgc 177357 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccaagaagaggcgccgcac 254 |||||||||||||||||||| Sbjct: 72973 gccaagaagaggcgccgcac 72992
>dbj|AK082633.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230072O15 product:hypothetical Eukaryotic protein kinase/Doublecortin containing protein, full insert sequence Length = 2753 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 412 gagaagaaggccaagaaggc 431
>gb|AF361867.1|AF361867 Azospirillum brasilense nif operon, complete sequence Length = 6045 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 caaggagcgcatcaagaaga 391 |||||||||||||||||||| Sbjct: 1611 caaggagcgcatcaagaaga 1630
>gb|AC016021.3|AC016021 Drosophila melanogaster, chromosome 2R, region 49A-49B, BAC clone BACR27F05, complete sequence Length = 158520 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 caggaagcagcacaagaagg 217 |||||||||||||||||||| Sbjct: 153670 caggaagcagcacaagaagg 153651
>emb|BX664706.9| Zebrafish DNA sequence from clone CH211-251F6 in linkage group 20, complete sequence Length = 103574 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 ctgccaagaagaggcgccgc 252 |||||||||||||||||||| Sbjct: 83042 ctgccaagaagaggcgccgc 83023
>emb|BX822576.1|CNS0A5YA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB4ZE05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1313 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 cagagaagccgctcttcgtg 367 |||||||||||||||||||| Sbjct: 849 cagagaagccgctcttcgtg 868
>emb|BX822342.1|CNS0A61D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZE12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1169 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 cagagaagccgctcttcgtg 367 |||||||||||||||||||| Sbjct: 809 cagagaagccgctcttcgtg 828
>emb|BX823625.1|CNS0A5BF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS59ZD10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1340 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 cagagaagccgctcttcgtg 367 |||||||||||||||||||| Sbjct: 873 cagagaagccgctcttcgtg 892
>dbj|AB198721.1| Mus musculus mRNA for doublecortin-like protein kinase, complete cds Length = 2466 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 273 gagaagaaggccaagaaggc 292
>dbj|AB197153.1| Takifugu rubripes RAF1 mRNA for serine/threonine protein kinase RAF1, complete cds Length = 2106 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 gcatcaagaagaccaaggatgaga 403 ||||||||||| |||||||||||| Sbjct: 1876 gcatcaagaagtccaaggatgaga 1899
>gb|BT005589.1| Arabidopsis thaliana clone U50189 unknown protein (At3g09350) mRNA, complete cds Length = 1211 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 cagagaagccgctcttcgtg 367 |||||||||||||||||||| Sbjct: 726 cagagaagccgctcttcgtg 745
>gb|BT004332.1| Arabidopsis thaliana clone RAFL15-45-M16 (R50189) unknown protein (At3g09350) mRNA, complete cds Length = 1318 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 cagagaagccgctcttcgtg 367 |||||||||||||||||||| Sbjct: 809 cagagaagccgctcttcgtg 828
>ref|XM_222232.3| PREDICTED: Rattus norvegicus similar to hypothetical protein MGC10854 (predicted) (LOC304547), mRNA Length = 2232 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 395 aggatgagaagaaggccaagaaggcaga 422 |||| |||||| |||||||||||||||| Sbjct: 1853 aggaagagaaggaggccaagaaggcaga 1880
>gb|AY085866.1| Arabidopsis thaliana clone 19154 mRNA, complete sequence Length = 1466 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 cagagaagccgctcttcgtg 367 |||||||||||||||||||| Sbjct: 897 cagagaagccgctcttcgtg 916
>ref|XM_579311.1| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 6330415M09 (predicted) (RGD1308384_predicted), mRNA Length = 3435 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 282 gagaagaaggccaagaaggc 301
>emb|BX571957.10| Zebrafish DNA sequence from clone DKEYP-117B4 in linkage group 18, complete sequence Length = 179945 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gccaagaagaggcgccgcac 254 |||||||||||||||||||| Sbjct: 39945 gccaagaagaggcgccgcac 39926
>gb|DQ340384.1| Oscheius myriophila heat shock protein 90 (Hsp90) gene, partial cds Length = 875 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 aaggatgagaagaaggccaagaag 417 ||||||||||||||| |||||||| Sbjct: 564 aaggatgagaagaagaccaagaag 587
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 1361692 agaaggccaagaaggcagag 1361673
>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome Length = 1738505 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 584 tagacctttctcaagttaccttgc 607 |||||||||||||||| ||||||| Sbjct: 20348 tagacctttctcaagtaaccttgc 20371
>dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility complex class I region Length = 1750601 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 937316 agaaggccaagaaggcagag 937297
>gb|AY806970.1| Uncultured Actinomyces sp. clone IS023B25 16S ribosomal RNA gene, partial sequence Length = 784 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 gttatccagaagaagagggc 320 |||||||||||||||||||| Sbjct: 73 gttatccagaagaagagggc 54
>gb|AY888071.1| Synthetic construct Homo sapiens clone FLH159305.01L hypothetical protein MGC45428 (MGC45428) mRNA, partial cds Length = 2088 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 202 gagaagaaggccaagaaggc 221
>emb|AJ507295.1|AOR507295 Actinomyces oricola 16S rRNA gene, type strain CCUG 46090T Length = 1508 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 gttatccagaagaagagggc 320 |||||||||||||||||||| Sbjct: 127 gttatccagaagaagagggc 108
>emb|AL928790.4| Zebrafish DNA sequence from clone CH211-146N9, complete sequence Length = 171673 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gccaagaagaggcgccgcac 254 |||||||||||||||||||| Sbjct: 43682 gccaagaagaggcgccgcac 43663
>dbj|AB113357.1| Sus scrofa 433 kb genomic segment, located between the non-classical and classical SLA class I gene cluster, clone: BAC 1111D10 Length = 114375 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 17597 agaaggccaagaaggcagag 17616
>emb|X81063.1|ASRRNA16S Actinomyces sp. 16S rRNA gene Length = 1417 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 gttatccagaagaagagggc 320 |||||||||||||||||||| Sbjct: 106 gttatccagaagaagagggc 87
>ref|NM_209563.1| Eremothecium gossypii ADR114Cp (ADR114C), mRNA Length = 2085 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 gagatcaaggagcgcatcaagaag 390 |||||| ||||||||||||||||| Sbjct: 502 gagatccaggagcgcatcaagaag 525
>gb|BC032726.1| Homo sapiens doublecortin and CaM kinase-like 2, mRNA (cDNA clone MGC:45428 IMAGE:5532881), complete cds Length = 3626 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 249 gagaagaaggccaagaaggc 268
>emb|CR631125.9| Zebrafish DNA sequence from clone CH211-188C18, complete sequence Length = 43431 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gccaagaagaggcgccgcac 254 |||||||||||||||||||| Sbjct: 41100 gccaagaagaggcgccgcac 41081
>emb|CR392007.7| Zebrafish DNA sequence from clone DKEYP-52F1 in linkage group 18, complete sequence Length = 116358 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccaagaagaggcgccgcac 254 |||||||||||||||||||| Sbjct: 43037 gccaagaagaggcgccgcac 43056
>emb|AL929507.37| Zebrafish DNA sequence from clone DKEY-7C18 in linkage group 20, complete sequence Length = 214404 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 ctgccaagaagaggcgccgc 252 |||||||||||||||||||| Sbjct: 202926 ctgccaagaagaggcgccgc 202907
>gb|AY674000.1| Rattus norvegicus doublecortin kinase-2 (Dck2) mRNA, complete cds; transcript variant 4 Length = 2304 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 202 gagaagaaggccaagaaggc 221
>gb|AY673998.1| Rattus norvegicus doublecortin kinase-2 (Dck2) mRNA, complete cds; transcript variant 2 Length = 3458 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 282 gagaagaaggccaagaaggc 301
>gb|AY673997.1| Rattus norvegicus doublecortin kinase-2 (Dck2) mRNA, complete cds; transcript variant 1 Length = 2317 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 202 gagaagaaggccaagaaggc 221
>emb|CR790363.24| Zebrafish DNA sequence from clone DKEY-175D9 in linkage group 3, complete sequence Length = 139765 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccaagaagaggcgccgcac 254 |||||||||||||||||||| Sbjct: 33204 gccaagaagaggcgccgcac 33223
>gb|BC060192.1| Mus musculus doublecortin and CaM kinase-like 2, mRNA (cDNA clone IMAGE:6844083) Length = 4939 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 220 gagaagaaggccaagaaggc 239
>gb|AC007453.1|AC007453 Drosophila melanogaster, chromosome 2R, region 49C1-49D3, P1 clones DS04499, DS06146, and DS00455, complete sequence Length = 145055 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 caggaagcagcacaagaagg 217 |||||||||||||||||||| Sbjct: 38423 caggaagcagcacaagaagg 38404
>emb|AL133163.3|CNS01DU4 Human chromosome 14 DNA sequence BAC R-561B11 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 183491 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gcctgcaaagctttgctgga 187 |||||||||||||||||||| Sbjct: 101147 gcctgcaaagctttgctgga 101166
>dbj|AB086374.1| Sesbania rostrata srha5 mRNA for plasma membrane H+-ATPase, complete cds Length = 3376 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 308 agaagaagagggctgagaagcctgaagt 335 ||||||||| || ||||||||||||||| Sbjct: 278 agaagaagatgggtgagaagcctgaagt 305
>gb|AC006138.1|AC006138 Homo sapiens clone UWGC:y54c194 from 6p21, complete sequence Length = 37448 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 29772 agaaggccaagaaggcagag 29753
>emb|BX005250.7| Zebrafish DNA sequence from clone DKEY-35H6 in linkage group 14, complete sequence Length = 281427 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccaagaagaggcgccgcac 254 |||||||||||||||||||| Sbjct: 259732 gccaagaagaggcgccgcac 259751 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 ctgccaagaagaggcgccgc 252 |||||||||||||||||||| Sbjct: 39542 ctgccaagaagaggcgccgc 39561
>gb|AF027302.1|AF027302 Homo sapiens TNF-alpha stimulated ABC protein (ABC50) mRNA, complete cds Length = 3141 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 750 agaaggccaagaaggcagag 769
>dbj|AB088096.1| Homo sapiens ABC50 gene for ATP-binding cassette, sub-family F (GCN20), member 1, complete cds Length = 21843 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggccaagaaggcagag 423 |||||||||||||||||||| Sbjct: 9666 agaaggccaagaaggcagag 9685
>ref|NM_001037989.1| Takifugu rubripes serine/threonine protein kinase RAF1 (raf1), mRNA Length = 2106 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 gcatcaagaagaccaaggatgaga 403 ||||||||||| |||||||||||| Sbjct: 1876 gcatcaagaagtccaaggatgaga 1899
>emb|CR550307.8| Zebrafish DNA sequence from clone DKEY-174E10 in linkage group 11, complete sequence Length = 178645 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccaagaagaggcgccgcac 254 |||||||||||||||||||| Sbjct: 28608 gccaagaagaggcgccgcac 28627
>emb|BX005367.10| Zebrafish DNA sequence from clone DKEY-97L20 in linkage group 22, complete sequence Length = 243709 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 ctgccaagaagaggcgccgc 252 |||||||||||||||||||| Sbjct: 213240 ctgccaagaagaggcgccgc 213259
>emb|AL844192.12| Zebrafish DNA sequence from clone DKEY-245I2, complete sequence Length = 219054 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 ctgccaagaagaggcgccgc 252 |||||||||||||||||||| Sbjct: 99230 ctgccaagaagaggcgccgc 99249
>dbj|AB209181.1| Homo sapiens mRNA for Hypothetical protein DKFZp761I032 variant protein Length = 4235 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gagaagaaggccaagaaggc 419 |||||||||||||||||||| Sbjct: 956 gagaagaaggccaagaaggc 975 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,457,076 Number of Sequences: 3902068 Number of extensions: 6457076 Number of successful extensions: 154537 Number of sequences better than 10.0: 253 Number of HSP's better than 10.0 without gapping: 253 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 153524 Number of HSP's gapped (non-prelim): 1008 length of query: 691 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 668 effective length of database: 17,143,297,704 effective search space: 11451722866272 effective search space used: 11451722866272 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
