ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags36p07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_191385.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2073 Score = 323 bits (163), Expect = 4e-85 Identities = 247/275 (89%) Strand = Plus / Plus Query: 14 ttcactctcttctgcgtcatacttccaatgacaatgtttgctcctgaagcagagctacct 73 ||||| || |||||| |||| ||||| ||||||||||||| |||||||| ||||| ||| Sbjct: 1528 ttcacacttttctgcatcatccttcccatgacaatgtttgtccctgaagctgagctccct 1587 Query: 74 gcttgggtggtgtgctacattccagcaaccatgtccttgcttaacatcctcccagcccca 133 || |||||||||||||||||||||||||||||||||||||| || || |||||||| || Sbjct: 1588 gcatgggtggtgtgctacattccagcaaccatgtccttgctgaatattctcccagcaccc 1647 Query: 134 aagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaag 193 || ||||||||||| || ||||||||||||||||||||||| |||||||||||||| || Sbjct: 1648 aaatccttcccatttattgttccctaccttctgtttgagaataccatgtcagtgacaaaa 1707 Query: 194 ttcaacgccatgatctccggcttgttccagctcgggagcgcctacgagtgggtcgtcacc 253 ||||| |||||||| || ||||||||||||||||||||||||||||||||||| || ||| Sbjct: 1708 ttcaatgccatgatttctggcttgttccagctcgggagcgcctacgagtgggttgtgacc 1767 Query: 254 aagaaatcaggccgttcttcggagggcgatctcgt 288 |||||||| ||||||||||| |||||||||||||| Sbjct: 1768 aagaaatcgggccgttcttctgagggcgatctcgt 1802 Score = 161 bits (81), Expect = 4e-36 Identities = 153/177 (86%) Strand = Plus / Plus Query: 401 aaaaagaagaaacacaataggttatacaggaaagaactagcactctccttcctcctcttg 460 |||||||| |||||||||||| ||||| ||| || || |||||||||||||| || || Sbjct: 1897 aaaaagaaaaaacacaataggatataccagaaggagctggcactctccttccttctatta 1956 Query: 461 acagcagcatctcgcagcctgctgtcggttcagggcatacatttctacttccttctgttc 520 ||||||||| |||| |||||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 1957 acagcagcagctcgaagcctgctctcggtgcaaggcatacatttctacttccttctgttc 2016 Query: 521 cagggggtgtcgttcctggtcgtcgggctcgacctcatcggcgagcaggtcgagtga 577 || ||||| || ||| |||| ||||| |||||| | ||||||||||| ||||||||| Sbjct: 2017 caaggggtctcattcttggttgtcggcctcgacttgatcggcgagcaagtcgagtga 2073
>tpg|BK000086.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cellulose synthase-like C1 gene, complete cds Length = 7383 Score = 323 bits (163), Expect = 4e-85 Identities = 247/275 (89%) Strand = Plus / Plus Query: 14 ttcactctcttctgcgtcatacttccaatgacaatgtttgctcctgaagcagagctacct 73 ||||| || |||||| |||| ||||| ||||||||||||| |||||||| ||||| ||| Sbjct: 4168 ttcacacttttctgcatcatccttcccatgacaatgtttgtccctgaagctgagctccct 4227 Query: 74 gcttgggtggtgtgctacattccagcaaccatgtccttgcttaacatcctcccagcccca 133 || |||||||||||||||||||||||||||||||||||||| || || |||||||| || Sbjct: 4228 gcatgggtggtgtgctacattccagcaaccatgtccttgctgaatattctcccagcaccc 4287 Query: 134 aagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaag 193 || ||||||||||| || ||||||||||||||||||||||| |||||||||||||| || Sbjct: 4288 aaatccttcccatttattgttccctaccttctgtttgagaataccatgtcagtgacaaaa 4347 Query: 194 ttcaacgccatgatctccggcttgttccagctcgggagcgcctacgagtgggtcgtcacc 253 ||||| |||||||| || ||||||||||||||||||||||||||||||||||| || ||| Sbjct: 4348 ttcaatgccatgatttctggcttgttccagctcgggagcgcctacgagtgggttgtgacc 4407 Query: 254 aagaaatcaggccgttcttcggagggcgatctcgt 288 |||||||| ||||||||||| |||||||||||||| Sbjct: 4408 aagaaatcgggccgttcttctgagggcgatctcgt 4442 Score = 163 bits (82), Expect = 9e-37 Identities = 154/178 (86%) Strand = Plus / Plus Query: 401 aaaaagaagaaacacaataggttatacaggaaagaactagcactctccttcctcctcttg 460 |||||||| |||||||||||| ||||| ||| || || |||||||||||||| || || Sbjct: 4537 aaaaagaaaaaacacaataggatataccagaaggagctggcactctccttccttctatta 4596 Query: 461 acagcagcatctcgcagcctgctgtcggttcagggcatacatttctacttccttctgttc 520 ||||||||| |||| |||||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 4597 acagcagcagctcgaagcctgctctcggtgcaaggcatacatttctacttccttctgttc 4656 Query: 521 cagggggtgtcgttcctggtcgtcgggctcgacctcatcggcgagcaggtcgagtgat 578 || ||||| || ||| |||| ||||| |||||| | ||||||||||| |||||||||| Sbjct: 4657 caaggggtctcattcttggttgtcggcctcgacttgatcggcgagcaagtcgagtgat 4714
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 323 bits (163), Expect = 4e-85 Identities = 247/275 (89%) Strand = Plus / Minus Query: 14 ttcactctcttctgcgtcatacttccaatgacaatgtttgctcctgaagcagagctacct 73 ||||| || |||||| |||| ||||| ||||||||||||| |||||||| ||||| ||| Sbjct: 32312809 ttcacacttttctgcatcatccttcccatgacaatgtttgtccctgaagctgagctccct 32312750 Query: 74 gcttgggtggtgtgctacattccagcaaccatgtccttgcttaacatcctcccagcccca 133 || |||||||||||||||||||||||||||||||||||||| || || |||||||| || Sbjct: 32312749 gcatgggtggtgtgctacattccagcaaccatgtccttgctgaatattctcccagcaccc 32312690 Query: 134 aagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaag 193 || ||||||||||| || ||||||||||||||||||||||| |||||||||||||| || Sbjct: 32312689 aaatccttcccatttattgttccctaccttctgtttgagaataccatgtcagtgacaaaa 32312630 Query: 194 ttcaacgccatgatctccggcttgttccagctcgggagcgcctacgagtgggtcgtcacc 253 ||||| |||||||| || ||||||||||||||||||||||||||||||||||| || ||| Sbjct: 32312629 ttcaatgccatgatttctggcttgttccagctcgggagcgcctacgagtgggttgtgacc 32312570 Query: 254 aagaaatcaggccgttcttcggagggcgatctcgt 288 |||||||| ||||||||||| |||||||||||||| Sbjct: 32312569 aagaaatcgggccgttcttctgagggcgatctcgt 32312535 Score = 163 bits (82), Expect = 9e-37 Identities = 154/178 (86%) Strand = Plus / Minus Query: 401 aaaaagaagaaacacaataggttatacaggaaagaactagcactctccttcctcctcttg 460 |||||||| |||||||||||| ||||| ||| || || |||||||||||||| || || Sbjct: 32312440 aaaaagaaaaaacacaataggatataccagaaggagctggcactctccttccttctatta 32312381 Query: 461 acagcagcatctcgcagcctgctgtcggttcagggcatacatttctacttccttctgttc 520 ||||||||| |||| |||||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 32312380 acagcagcagctcgaagcctgctctcggtgcaaggcatacatttctacttccttctgttc 32312321 Query: 521 cagggggtgtcgttcctggtcgtcgggctcgacctcatcggcgagcaggtcgagtgat 578 || ||||| || ||| |||| ||||| |||||| | ||||||||||| |||||||||| Sbjct: 32312320 caaggggtctcattcttggttgtcggcctcgacttgatcggcgagcaagtcgagtgat 32312263
>dbj|AP003377.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0053G03 Length = 101901 Score = 323 bits (163), Expect = 4e-85 Identities = 247/275 (89%) Strand = Plus / Minus Query: 14 ttcactctcttctgcgtcatacttccaatgacaatgtttgctcctgaagcagagctacct 73 ||||| || |||||| |||| ||||| ||||||||||||| |||||||| ||||| ||| Sbjct: 45094 ttcacacttttctgcatcatccttcccatgacaatgtttgtccctgaagctgagctccct 45035 Query: 74 gcttgggtggtgtgctacattccagcaaccatgtccttgcttaacatcctcccagcccca 133 || |||||||||||||||||||||||||||||||||||||| || || |||||||| || Sbjct: 45034 gcatgggtggtgtgctacattccagcaaccatgtccttgctgaatattctcccagcaccc 44975 Query: 134 aagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaag 193 || ||||||||||| || ||||||||||||||||||||||| |||||||||||||| || Sbjct: 44974 aaatccttcccatttattgttccctaccttctgtttgagaataccatgtcagtgacaaaa 44915 Query: 194 ttcaacgccatgatctccggcttgttccagctcgggagcgcctacgagtgggtcgtcacc 253 ||||| |||||||| || ||||||||||||||||||||||||||||||||||| || ||| Sbjct: 44914 ttcaatgccatgatttctggcttgttccagctcgggagcgcctacgagtgggttgtgacc 44855 Query: 254 aagaaatcaggccgttcttcggagggcgatctcgt 288 |||||||| ||||||||||| |||||||||||||| Sbjct: 44854 aagaaatcgggccgttcttctgagggcgatctcgt 44820 Score = 163 bits (82), Expect = 9e-37 Identities = 154/178 (86%) Strand = Plus / Minus Query: 401 aaaaagaagaaacacaataggttatacaggaaagaactagcactctccttcctcctcttg 460 |||||||| |||||||||||| ||||| ||| || || |||||||||||||| || || Sbjct: 44725 aaaaagaaaaaacacaataggatataccagaaggagctggcactctccttccttctatta 44666 Query: 461 acagcagcatctcgcagcctgctgtcggttcagggcatacatttctacttccttctgttc 520 ||||||||| |||| |||||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 44665 acagcagcagctcgaagcctgctctcggtgcaaggcatacatttctacttccttctgttc 44606 Query: 521 cagggggtgtcgttcctggtcgtcgggctcgacctcatcggcgagcaggtcgagtgat 578 || ||||| || ||| |||| ||||| |||||| | ||||||||||| |||||||||| Sbjct: 44605 caaggggtctcattcttggttgtcggcctcgacttgatcggcgagcaagtcgagtgat 44548
>dbj|AK110759.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-H04, full insert sequence Length = 912 Score = 301 bits (152), Expect = 2e-78 Identities = 224/248 (90%) Strand = Plus / Plus Query: 41 atgacaatgtttgctcctgaagcagagctacctgcttgggtggtgtgctacattccagca 100 ||||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||||| Sbjct: 4 atgacaatgtttgtccccgaagctgagctccctgcatgggtggtgtgctacattccagca 63 Query: 101 accatgtccttgcttaacatcctcccagccccaaagtccttcccattcatcgttccctac 160 |||||||||||||| || || |||||||| || || ||||||||||| || ||||||||| Sbjct: 64 accatgtccttgctgaatattctcccagcacccaaatccttcccatttattgttccctac 123 Query: 161 cttctgtttgagaacaccatgtcagtgaccaagttcaacgccatgatctccggcttgttc 220 |||||||||||||| |||||||||||||| || ||||| |||||||| || ||||||||| Sbjct: 124 cttctgtttgagaataccatgtcagtgacaaaattcaatgccatgatttctggcttgttc 183 Query: 221 cagctcgggagcgcctacgagtgggtcgtcaccaagaaatcaggccgttcttcggagggc 280 |||||||||||||||||||||||||| || ||||||||||| ||||||||||| |||||| Sbjct: 184 cagctcgggagcgcctacgagtgggttgtgaccaagaaatcgggccgttcttctgagggc 243 Query: 281 gatctcgt 288 |||||||| Sbjct: 244 gatctcgt 251 Score = 163 bits (82), Expect = 9e-37 Identities = 154/178 (86%) Strand = Plus / Plus Query: 401 aaaaagaagaaacacaataggttatacaggaaagaactagcactctccttcctcctcttg 460 |||||||| |||||||||||| ||||| ||| || || |||||||||||||| || || Sbjct: 346 aaaaagaaaaaacacaataggatataccagaaggagctggcactctccttccttctatta 405 Query: 461 acagcagcatctcgcagcctgctgtcggttcagggcatacatttctacttccttctgttc 520 ||||||||| |||| |||||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 406 acagcagcagctcgaagcctgctctcggtgcaaggcatacatttctacttccttctgttc 465 Query: 521 cagggggtgtcgttcctggtcgtcgggctcgacctcatcggcgagcaggtcgagtgat 578 || ||||| || ||| |||| ||||| |||||| | ||||||||||| |||||||||| Sbjct: 466 caaggggtctcattcttggttgtcggcctcgacttgatcggcgagcaagtcgagtgat 523
>ref|XM_475689.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2067 Score = 272 bits (137), Expect = 1e-69 Identities = 239/273 (87%) Strand = Plus / Plus Query: 13 attcactctcttctgcgtcatacttccaatgacaatgtttgctcctgaagcagagctacc 72 |||||| || ||||| ||||| ||||| ||||||||||||| ||||||||| ||||| || Sbjct: 1518 attcacacttttctgtgtcatccttcccatgacaatgtttgttcctgaagctgagctccc 1577 Query: 73 tgcttgggtggtgtgctacattccagcaaccatgtccttgcttaacatcctcccagcccc 132 ||| ||||| || |||||||||||||| || |||||| | || ||||||||||||||||| Sbjct: 1578 tgcctgggttgtatgctacattccagctacaatgtccatcctgaacatcctcccagcccc 1637 Query: 133 aaagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaa 192 ||| || ||||||||||| || || |||||||| || |||||||| ||||| || ||||| Sbjct: 1638 aaaatctttcccattcattgtcccataccttcttttcgagaacactatgtccgtaaccaa 1697 Query: 193 gttcaacgccatgatctccggcttgttccagctcgggagcgcctacgagtgggtcgtcac 252 |||||| |||||||| || || ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 1698 gttcaatgccatgatttctggattgttccagctcgggagtgcctatgagtgggttgtcac 1757 Query: 253 caagaaatcaggccgttcttcggagggcgatct 285 |||||||||||| |||||||||||||||||||| Sbjct: 1758 caagaaatcaggtcgttcttcggagggcgatct 1790 Score = 101 bits (51), Expect = 3e-18 Identities = 147/179 (82%) Strand = Plus / Plus Query: 399 ccaaaaagaagaaacacaataggttatacaggaaagaactagcactctccttcctcctct 458 |||| |||||||| ||||||||| | |||||||| ||||| ||||| ||||||||| | | Sbjct: 1889 ccaagaagaagaagcacaataggatctacaggaaggaactggcactttccttcctcttgt 1948 Query: 459 tgacagcagcatctcgcagcctgctgtcggttcagggcatacatttctacttccttctgt 518 | || |||||| ||||||| |||| || | |||||| || ||||||||||| ||||||| Sbjct: 1949 taacggcagcagctcgcagtttgctatctgctcagggaatccatttctactttcttctgt 2008 Query: 519 tccagggggtgtcgttcctggtcgtcgggctcgacctcatcggcgagcaggtcgagtga 577 |||| ||||| || ||| |||| || || |||||||| || || ||||| || |||||| Sbjct: 2009 tccaaggggtctcattcttggttgttggtctcgacctaattggtgagcaagtggagtga 2067
>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11, complete sequence Length = 162772 Score = 272 bits (137), Expect = 1e-69 Identities = 239/273 (87%) Strand = Plus / Minus Query: 13 attcactctcttctgcgtcatacttccaatgacaatgtttgctcctgaagcagagctacc 72 |||||| || ||||| ||||| ||||| ||||||||||||| ||||||||| ||||| || Sbjct: 44055 attcacacttttctgtgtcatccttcccatgacaatgtttgttcctgaagctgagctccc 43996 Query: 73 tgcttgggtggtgtgctacattccagcaaccatgtccttgcttaacatcctcccagcccc 132 ||| ||||| || |||||||||||||| || |||||| | || ||||||||||||||||| Sbjct: 43995 tgcctgggttgtatgctacattccagctacaatgtccatcctgaacatcctcccagcccc 43936 Query: 133 aaagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaa 192 ||| || ||||||||||| || || |||||||| || |||||||| ||||| || ||||| Sbjct: 43935 aaaatctttcccattcattgtcccataccttcttttcgagaacactatgtccgtaaccaa 43876 Query: 193 gttcaacgccatgatctccggcttgttccagctcgggagcgcctacgagtgggtcgtcac 252 |||||| |||||||| || || ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 43875 gttcaatgccatgatttctggattgttccagctcgggagtgcctatgagtgggttgtcac 43816 Query: 253 caagaaatcaggccgttcttcggagggcgatct 285 |||||||||||| |||||||||||||||||||| Sbjct: 43815 caagaaatcaggtcgttcttcggagggcgatct 43783 Score = 103 bits (52), Expect = 7e-19 Identities = 148/180 (82%) Strand = Plus / Minus Query: 399 ccaaaaagaagaaacacaataggttatacaggaaagaactagcactctccttcctcctct 458 |||| |||||||| ||||||||| | |||||||| ||||| ||||| ||||||||| | | Sbjct: 43684 ccaagaagaagaagcacaataggatctacaggaaggaactggcactttccttcctcttgt 43625 Query: 459 tgacagcagcatctcgcagcctgctgtcggttcagggcatacatttctacttccttctgt 518 | || |||||| ||||||| |||| || | |||||| || ||||||||||| ||||||| Sbjct: 43624 taacggcagcagctcgcagtttgctatctgctcagggaatccatttctactttcttctgt 43565 Query: 519 tccagggggtgtcgttcctggtcgtcgggctcgacctcatcggcgagcaggtcgagtgat 578 |||| ||||| || ||| |||| || || |||||||| || || ||||| || ||||||| Sbjct: 43564 tccaaggggtctcattcttggttgttggtctcgacctaattggtgagcaagtggagtgat 43505
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 272 bits (137), Expect = 1e-69 Identities = 239/273 (87%) Strand = Plus / Minus Query: 13 attcactctcttctgcgtcatacttccaatgacaatgtttgctcctgaagcagagctacc 72 |||||| || ||||| ||||| ||||| ||||||||||||| ||||||||| ||||| || Sbjct: 25101400 attcacacttttctgtgtcatccttcccatgacaatgtttgttcctgaagctgagctccc 25101341 Query: 73 tgcttgggtggtgtgctacattccagcaaccatgtccttgcttaacatcctcccagcccc 132 ||| ||||| || |||||||||||||| || |||||| | || ||||||||||||||||| Sbjct: 25101340 tgcctgggttgtatgctacattccagctacaatgtccatcctgaacatcctcccagcccc 25101281 Query: 133 aaagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaa 192 ||| || ||||||||||| || || |||||||| || |||||||| ||||| || ||||| Sbjct: 25101280 aaaatctttcccattcattgtcccataccttcttttcgagaacactatgtccgtaaccaa 25101221 Query: 193 gttcaacgccatgatctccggcttgttccagctcgggagcgcctacgagtgggtcgtcac 252 |||||| |||||||| || || ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 25101220 gttcaatgccatgatttctggattgttccagctcgggagtgcctatgagtgggttgtcac 25101161 Query: 253 caagaaatcaggccgttcttcggagggcgatct 285 |||||||||||| |||||||||||||||||||| Sbjct: 25101160 caagaaatcaggtcgttcttcggagggcgatct 25101128 Score = 103 bits (52), Expect = 7e-19 Identities = 148/180 (82%) Strand = Plus / Minus Query: 399 ccaaaaagaagaaacacaataggttatacaggaaagaactagcactctccttcctcctct 458 |||| |||||||| ||||||||| | |||||||| ||||| ||||| ||||||||| | | Sbjct: 25101029 ccaagaagaagaagcacaataggatctacaggaaggaactggcactttccttcctcttgt 25100970 Query: 459 tgacagcagcatctcgcagcctgctgtcggttcagggcatacatttctacttccttctgt 518 | || |||||| ||||||| |||| || | |||||| || ||||||||||| ||||||| Sbjct: 25100969 taacggcagcagctcgcagtttgctatctgctcagggaatccatttctactttcttctgt 25100910 Query: 519 tccagggggtgtcgttcctggtcgtcgggctcgacctcatcggcgagcaggtcgagtgat 578 |||| ||||| || ||| |||| || || |||||||| || || ||||| || ||||||| Sbjct: 25100909 tccaaggggtctcattcttggttgttggtctcgacctaattggtgagcaagtggagtgat 25100850
>gb|AF435642.1| Oryza sativa CSLC7 mRNA, partial cds Length = 1113 Score = 272 bits (137), Expect = 1e-69 Identities = 239/273 (87%) Strand = Plus / Plus Query: 13 attcactctcttctgcgtcatacttccaatgacaatgtttgctcctgaagcagagctacc 72 |||||| || ||||| ||||| ||||| ||||||||||||| ||||||||| ||||| || Sbjct: 212 attcacacttttctgtgtcatccttcccatgacaatgtttgttcctgaagctgagctccc 271 Query: 73 tgcttgggtggtgtgctacattccagcaaccatgtccttgcttaacatcctcccagcccc 132 ||| ||||| || |||||||||||||| || |||||| | || ||||||||||||||||| Sbjct: 272 tgcctgggttgtatgctacattccagctacaatgtccatcctgaacatcctcccagcccc 331 Query: 133 aaagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaa 192 ||| || ||||||||||| || || |||||||| || |||||||| ||||| || ||||| Sbjct: 332 aaaatctttcccattcattgtcccataccttcttttcgagaacactatgtccgtaaccaa 391 Query: 193 gttcaacgccatgatctccggcttgttccagctcgggagcgcctacgagtgggtcgtcac 252 |||||| |||||||| || || ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 392 gttcaatgccatgatttctggattgttccagctcgggagtgcctatgagtgggttgtcac 451 Query: 253 caagaaatcaggccgttcttcggagggcgatct 285 |||||||||||| |||||||||||||||||||| Sbjct: 452 caagaaatcaggtcgttcttcggagggcgatct 484 Score = 103 bits (52), Expect = 7e-19 Identities = 148/180 (82%) Strand = Plus / Plus Query: 399 ccaaaaagaagaaacacaataggttatacaggaaagaactagcactctccttcctcctct 458 |||| |||||||| ||||||||| | |||||||| ||||| ||||| ||||||||| | | Sbjct: 583 ccaagaagaagaagcacaataggatctacaggaaggaactggcactttccttcctcttgt 642 Query: 459 tgacagcagcatctcgcagcctgctgtcggttcagggcatacatttctacttccttctgt 518 | || |||||| ||||||| |||| || | |||||| || ||||||||||| ||||||| Sbjct: 643 taacggcagcagctcgcagtttgctatctgctcagggaatccatttctactttcttctgt 702 Query: 519 tccagggggtgtcgttcctggtcgtcgggctcgacctcatcggcgagcaggtcgagtgat 578 |||| ||||| || ||| |||| || || |||||||| || || ||||| || ||||||| Sbjct: 703 tccaaggggtctcattcttggttgttggtctcgacctaattggtgagcaagtggagtgat 762
>ref|XM_476455.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2061 Score = 159 bits (80), Expect = 1e-35 Identities = 224/272 (82%) Strand = Plus / Plus Query: 14 ttcactctcttctgcgtcatacttccaatgacaatgtttgctcctgaagcagagctacct 73 ||||| || |||||| |||| || ||||||||||||||| |||||||| ||||| ||| Sbjct: 1513 ttcacacttttctgcatcatcctaccaatgacaatgtttatacctgaagctgagcttcct 1572 Query: 74 gcttgggtggtgtgctacattccagcaaccatgtccttgcttaacatcctcccagcccca 133 | ||||| || ||||||||||| || |||||||| |||||||| || || || ||| Sbjct: 1573 gactgggttgtctgctacattcctgccctgatgtccttccttaacattcttcccgcgcca 1632 Query: 134 aagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaag 193 || || ||||| |||||| | || ||||| || || |||||||||||||| || |||||| Sbjct: 1633 aaatcattcccgttcatcatcccgtacctgctcttcgagaacaccatgtctgtcaccaag 1692 Query: 194 ttcaacgccatgatctccggcttgttccagctcgggagcgcctacgagtgggtcgtcacc 253 ||||| || ||||||||||| ||||||||||||| ||||| || || ||||| || ||| Sbjct: 1693 ttcaatgcaatgatctccgggctgttccagctcggaagcgcatatgaatgggtagtgacc 1752 Query: 254 aagaaatcaggccgttcttcggagggcgatct 285 |||||||||||||| || |||||||| ||||| Sbjct: 1753 aagaaatcaggccgatcatcggagggtgatct 1784
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 159 bits (80), Expect = 1e-35 Identities = 224/272 (82%) Strand = Plus / Minus Query: 14 ttcactctcttctgcgtcatacttccaatgacaatgtttgctcctgaagcagagctacct 73 ||||| || |||||| |||| || ||||||||||||||| |||||||| ||||| ||| Sbjct: 1304876 ttcacacttttctgcatcatcctaccaatgacaatgtttatacctgaagctgagcttcct 1304817 Query: 74 gcttgggtggtgtgctacattccagcaaccatgtccttgcttaacatcctcccagcccca 133 | ||||| || ||||||||||| || |||||||| |||||||| || || || ||| Sbjct: 1304816 gactgggttgtctgctacattcctgccctgatgtccttccttaacattcttcccgcgcca 1304757 Query: 134 aagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaag 193 || || ||||| |||||| | || ||||| || || |||||||||||||| || |||||| Sbjct: 1304756 aaatcattcccgttcatcatcccgtacctgctcttcgagaacaccatgtctgtcaccaag 1304697 Query: 194 ttcaacgccatgatctccggcttgttccagctcgggagcgcctacgagtgggtcgtcacc 253 ||||| || ||||||||||| ||||||||||||| ||||| || || ||||| || ||| Sbjct: 1304696 ttcaatgcaatgatctccgggctgttccagctcggaagcgcatatgaatgggtagtgacc 1304637 Query: 254 aagaaatcaggccgttcttcggagggcgatct 285 |||||||||||||| || |||||||| ||||| Sbjct: 1304636 aagaaatcaggccgatcatcggagggtgatct 1304605
>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0474G09 Length = 169511 Score = 159 bits (80), Expect = 1e-35 Identities = 224/272 (82%) Strand = Plus / Minus Query: 14 ttcactctcttctgcgtcatacttccaatgacaatgtttgctcctgaagcagagctacct 73 ||||| || |||||| |||| || ||||||||||||||| |||||||| ||||| ||| Sbjct: 69711 ttcacacttttctgcatcatcctaccaatgacaatgtttatacctgaagctgagcttcct 69652 Query: 74 gcttgggtggtgtgctacattccagcaaccatgtccttgcttaacatcctcccagcccca 133 | ||||| || ||||||||||| || |||||||| |||||||| || || || ||| Sbjct: 69651 gactgggttgtctgctacattcctgccctgatgtccttccttaacattcttcccgcgcca 69592 Query: 134 aagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaag 193 || || ||||| |||||| | || ||||| || || |||||||||||||| || |||||| Sbjct: 69591 aaatcattcccgttcatcatcccgtacctgctcttcgagaacaccatgtctgtcaccaag 69532 Query: 194 ttcaacgccatgatctccggcttgttccagctcgggagcgcctacgagtgggtcgtcacc 253 ||||| || ||||||||||| ||||||||||||| ||||| || || ||||| || ||| Sbjct: 69531 ttcaatgcaatgatctccgggctgttccagctcggaagcgcatatgaatgggtagtgacc 69472 Query: 254 aagaaatcaggccgttcttcggagggcgatct 285 |||||||||||||| || |||||||| ||||| Sbjct: 69471 aagaaatcaggccgatcatcggagggtgatct 69440
>gb|BT018527.1| Zea mays clone EL01N0432H05.d mRNA sequence Length = 2043 Score = 151 bits (76), Expect = 3e-33 Identities = 160/188 (85%) Strand = Plus / Plus Query: 104 atgtccttgcttaacatcctcccagccccaaagtccttcccattcatcgttccctacctt 163 |||||| |||| |||||||| || |||| ||||| ||||| |||||| | || ||||| Sbjct: 1323 atgtccctgctgaacatcctgccgtcccccaagtcgttccccttcatcatcccgtacctg 1382 Query: 164 ctgtttgagaacaccatgtcagtgaccaagttcaacgccatgatctccggcttgttccag 223 || || |||||||||||||| ||||||||||||||||| ||||||||||| |||||||| Sbjct: 1383 ctcttcgagaacaccatgtccgtgaccaagttcaacgcgatgatctccgggctgttccag 1442 Query: 224 ctcgggagcgcctacgagtgggtcgtcaccaagaaatcaggccgttcttcggagggcgat 283 ||||||||||| ||||||||||| || || ||||| || ||||| || ||||||||||| Sbjct: 1443 ctcgggagcgcgtacgagtgggtggtgacgaagaagtcgggccgctcgtcggagggcgac 1502 Query: 284 ctcgtcgc 291 ||| |||| Sbjct: 1503 ctcatcgc 1510 Score = 83.8 bits (42), Expect = 7e-13 Identities = 87/102 (85%) Strand = Plus / Plus Query: 476 agcctgctgtcggttcagggcatacatttctacttccttctgttccagggggtgtcgttc 535 |||||||||||| ||||||||||| ||||||||||| ||||||||||| || || ||| Sbjct: 1725 agcctgctgtcgaagcagggcatacacttctacttcctcctgttccagggcgtctccttc 1784 Query: 536 ctggtcgtcgggctcgacctcatcggcgagcaggtcgagtga 577 || | || || || |||||||| |||||||||||||||||| Sbjct: 1785 ttgctagtaggccttgacctcataggcgagcaggtcgagtga 1826
>gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 genomic sequence, complete sequence Length = 150743 Score = 145 bits (73), Expect = 2e-31 Identities = 220/269 (81%) Strand = Plus / Plus Query: 14 ttcactctcttctgcgtcatacttccaatgacaatgtttgctcctgaagcagagctacct 73 ||||| ||||||||| |||| || |||||||| ||||||| |||||||| ||||| ||| Sbjct: 52947 ttcacgctcttctgcatcatcctcccaatgacgatgtttgtgcctgaagccgagcttcct 53006 Query: 74 gcttgggtggtgtgctacattccagcaaccatgtccttgcttaacatcctcccagcccca 133 | ||||| || ||||||||||| || ||||||||||| |||||||| || | || Sbjct: 53007 gactgggtcgtatgctacattcctgccctgatgtccttgctcaacatcctgccttctccg 53066 Query: 134 aagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaag 193 ||||| ||||| |||||| | || ||||| || || |||||||||||||| ||||| || Sbjct: 53067 aagtctttccctttcatcatcccatacctacttttcgagaacaccatgtccgtgacaaaa 53126 Query: 194 ttcaacgccatgatctccggcttgttccagctcgggagcgcctacgagtgggtcgtcacc 253 ||||| ||||||||||| || |||||||||| || | || ||||||||||| || ||| Sbjct: 53127 ttcaatgccatgatctctggtctgttccagcttggaaatgcatacgagtgggtggtgacc 53186 Query: 254 aagaaatcaggccgttcttcggagggcga 282 ||||| |||||||| || ||||||||||| Sbjct: 53187 aagaagtcaggccgatcatcggagggcga 53215 Score = 69.9 bits (35), Expect = 1e-08 Identities = 101/123 (82%) Strand = Plus / Plus Query: 403 aaagaagaaacacaataggttatacaggaaagaactagcactctccttcctcctcttgac 462 ||||||||| ||||| || |||||| |||||| || |||||||| || |||||| | || Sbjct: 53318 aaagaagaagcacaaccggatatacaagaaagagcttgcactctcattgctcctcctaac 53377 Query: 463 agcagcatctcgcagcctgctgtcggttcagggcatacatttctacttccttctgttcca 522 || ||| ||||||| |||| ||| ||||| ||||||||||||||||| |||||||| Sbjct: 53378 cgctgcagctcgcagtttgctctcgaaacagggtatacatttctacttcctcctgttcca 53437 Query: 523 ggg 525 ||| Sbjct: 53438 ggg 53440
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 145 bits (73), Expect = 2e-31 Identities = 220/269 (81%) Strand = Plus / Minus Query: 14 ttcactctcttctgcgtcatacttccaatgacaatgtttgctcctgaagcagagctacct 73 ||||| ||||||||| |||| || |||||||| ||||||| |||||||| ||||| ||| Sbjct: 31627720 ttcacgctcttctgcatcatcctcccaatgacgatgtttgtgcctgaagccgagcttcct 31627661 Query: 74 gcttgggtggtgtgctacattccagcaaccatgtccttgcttaacatcctcccagcccca 133 | ||||| || ||||||||||| || ||||||||||| |||||||| || | || Sbjct: 31627660 gactgggtcgtatgctacattcctgccctgatgtccttgctcaacatcctgccttctccg 31627601 Query: 134 aagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaag 193 ||||| ||||| |||||| | || ||||| || || |||||||||||||| ||||| || Sbjct: 31627600 aagtctttccctttcatcatcccatacctacttttcgagaacaccatgtccgtgacaaaa 31627541 Query: 194 ttcaacgccatgatctccggcttgttccagctcgggagcgcctacgagtgggtcgtcacc 253 ||||| ||||||||||| || |||||||||| || | || ||||||||||| || ||| Sbjct: 31627540 ttcaatgccatgatctctggtctgttccagcttggaaatgcatacgagtgggtggtgacc 31627481 Query: 254 aagaaatcaggccgttcttcggagggcga 282 ||||| |||||||| || ||||||||||| Sbjct: 31627480 aagaagtcaggccgatcatcggagggcga 31627452 Score = 69.9 bits (35), Expect = 1e-08 Identities = 101/123 (82%) Strand = Plus / Minus Query: 403 aaagaagaaacacaataggttatacaggaaagaactagcactctccttcctcctcttgac 462 ||||||||| ||||| || |||||| |||||| || |||||||| || |||||| | || Sbjct: 31627349 aaagaagaagcacaaccggatatacaagaaagagcttgcactctcattgctcctcctaac 31627290 Query: 463 agcagcatctcgcagcctgctgtcggttcagggcatacatttctacttccttctgttcca 522 || ||| ||||||| |||| ||| ||||| ||||||||||||||||| |||||||| Sbjct: 31627289 cgctgcagctcgcagtttgctctcgaaacagggtatacatttctacttcctcctgttcca 31627230 Query: 523 ggg 525 ||| Sbjct: 31627229 ggg 31627227
>gb|AF435653.1|AF435652S2 Oryza sativa CSLC9 gene, exon 5 and complete cds Length = 1572 Score = 145 bits (73), Expect = 2e-31 Identities = 220/269 (81%) Strand = Plus / Plus Query: 14 ttcactctcttctgcgtcatacttccaatgacaatgtttgctcctgaagcagagctacct 73 ||||| ||||||||| |||| || |||||||| ||||||| |||||||| ||||| ||| Sbjct: 533 ttcacgctcttctgcatcatcctcccaatgacgatgtttgtgcctgaagccgagcttcct 592 Query: 74 gcttgggtggtgtgctacattccagcaaccatgtccttgcttaacatcctcccagcccca 133 | ||||| || ||||||||||| || ||||||||||| |||||||| || | || Sbjct: 593 gactgggtcgtatgctacattcctgccctgatgtccttgctcaacatcctgccttctccg 652 Query: 134 aagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaag 193 ||||| ||||| |||||| | || ||||| || || |||||||||||||| ||||| || Sbjct: 653 aagtctttccctttcatcatcccatacctacttttcgagaacaccatgtccgtgacaaaa 712 Query: 194 ttcaacgccatgatctccggcttgttccagctcgggagcgcctacgagtgggtcgtcacc 253 ||||| ||||||||||| || |||||||||| || | || ||||||||||| || ||| Sbjct: 713 ttcaatgccatgatctctggtctgttccagcttggaaatgcatacgagtgggtggtgacc 772 Query: 254 aagaaatcaggccgttcttcggagggcga 282 ||||| |||||||| || ||||||||||| Sbjct: 773 aagaagtcaggccgatcatcggagggcga 801 Score = 69.9 bits (35), Expect = 1e-08 Identities = 101/123 (82%) Strand = Plus / Plus Query: 403 aaagaagaaacacaataggttatacaggaaagaactagcactctccttcctcctcttgac 462 ||||||||| ||||| || |||||| |||||| || |||||||| || |||||| | || Sbjct: 904 aaagaagaagcacaaccggatatacaagaaagagcttgcactctcattgctcctcctaac 963 Query: 463 agcagcatctcgcagcctgctgtcggttcagggcatacatttctacttccttctgttcca 522 || ||| ||||||| |||| ||| ||||| ||||||||||||||||| |||||||| Sbjct: 964 cgctgcagctcgcagtttgctctcgaaacagggtatacatttctacttcctcctgttcca 1023 Query: 523 ggg 525 ||| Sbjct: 1024 ggg 1026
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 145 bits (73), Expect = 2e-31 Identities = 220/269 (81%) Strand = Plus / Minus Query: 14 ttcactctcttctgcgtcatacttccaatgacaatgtttgctcctgaagcagagctacct 73 ||||| ||||||||| |||| || |||||||| ||||||| |||||||| ||||| ||| Sbjct: 31718236 ttcacgctcttctgcatcatcctcccaatgacgatgtttgtgcctgaagccgagcttcct 31718177 Query: 74 gcttgggtggtgtgctacattccagcaaccatgtccttgcttaacatcctcccagcccca 133 | ||||| || ||||||||||| || ||||||||||| |||||||| || | || Sbjct: 31718176 gactgggtcgtatgctacattcctgccctgatgtccttgctcaacatcctgccttctccg 31718117 Query: 134 aagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaag 193 ||||| ||||| |||||| | || ||||| || || |||||||||||||| ||||| || Sbjct: 31718116 aagtctttccctttcatcatcccatacctacttttcgagaacaccatgtccgtgacaaaa 31718057 Query: 194 ttcaacgccatgatctccggcttgttccagctcgggagcgcctacgagtgggtcgtcacc 253 ||||| ||||||||||| || |||||||||| || | || ||||||||||| || ||| Sbjct: 31718056 ttcaatgccatgatctctggtctgttccagcttggaaatgcatacgagtgggtggtgacc 31717997 Query: 254 aagaaatcaggccgttcttcggagggcga 282 ||||| |||||||| || ||||||||||| Sbjct: 31717996 aagaagtcaggccgatcatcggagggcga 31717968 Score = 69.9 bits (35), Expect = 1e-08 Identities = 101/123 (82%) Strand = Plus / Minus Query: 403 aaagaagaaacacaataggttatacaggaaagaactagcactctccttcctcctcttgac 462 ||||||||| ||||| || |||||| |||||| || |||||||| || |||||| | || Sbjct: 31717865 aaagaagaagcacaaccggatatacaagaaagagcttgcactctcattgctcctcctaac 31717806 Query: 463 agcagcatctcgcagcctgctgtcggttcagggcatacatttctacttccttctgttcca 522 || ||| ||||||| |||| ||| ||||| ||||||||||||||||| |||||||| Sbjct: 31717805 cgctgcagctcgcagtttgctctcgaaacagggtatacatttctacttcctcctgttcca 31717746 Query: 523 ggg 525 ||| Sbjct: 31717745 ggg 31717743
>gb|AF435641.1| Oryza sativa CSLC9 mRNA, complete cds Length = 2045 Score = 145 bits (73), Expect = 2e-31 Identities = 220/269 (81%) Strand = Plus / Plus Query: 14 ttcactctcttctgcgtcatacttccaatgacaatgtttgctcctgaagcagagctacct 73 ||||| ||||||||| |||| || |||||||| ||||||| |||||||| ||||| ||| Sbjct: 1385 ttcacgctcttctgcatcatcctcccaatgacgatgtttgtgcctgaagccgagcttcct 1444 Query: 74 gcttgggtggtgtgctacattccagcaaccatgtccttgcttaacatcctcccagcccca 133 | ||||| || ||||||||||| || ||||||||||| |||||||| || | || Sbjct: 1445 gactgggtcgtatgctacattcctgccctgatgtccttgctcaacatcctgccttctccg 1504 Query: 134 aagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaag 193 ||||| ||||| |||||| | || ||||| || || |||||||||||||| ||||| || Sbjct: 1505 aagtctttccctttcatcatcccatacctacttttcgagaacaccatgtccgtgacaaaa 1564 Query: 194 ttcaacgccatgatctccggcttgttccagctcgggagcgcctacgagtgggtcgtcacc 253 ||||| ||||||||||| || |||||||||| || | || ||||||||||| || ||| Sbjct: 1565 ttcaatgccatgatctctggtctgttccagcttggaaatgcatacgagtgggtggtgacc 1624 Query: 254 aagaaatcaggccgttcttcggagggcga 282 ||||| |||||||| || ||||||||||| Sbjct: 1625 aagaagtcaggccgatcatcggagggcga 1653 Score = 69.9 bits (35), Expect = 1e-08 Identities = 101/123 (82%) Strand = Plus / Plus Query: 403 aaagaagaaacacaataggttatacaggaaagaactagcactctccttcctcctcttgac 462 ||||||||| ||||| || |||||| |||||| || |||||||| || |||||| | || Sbjct: 1756 aaagaagaagcacaaccggatatacaagaaagagcttgcactctcattgctcctcctaac 1815 Query: 463 agcagcatctcgcagcctgctgtcggttcagggcatacatttctacttccttctgttcca 522 || ||| ||||||| |||| ||| ||||| ||||||||||||||||| |||||||| Sbjct: 1816 cgctgcagctcgcagtttgctctcgaaacagggtatacatttctacttcctcctgttcca 1875 Query: 523 ggg 525 ||| Sbjct: 1876 ggg 1878
>dbj|AK121805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033097L05, full insert sequence Length = 2260 Score = 145 bits (73), Expect = 2e-31 Identities = 220/269 (81%) Strand = Plus / Plus Query: 14 ttcactctcttctgcgtcatacttccaatgacaatgtttgctcctgaagcagagctacct 73 ||||| ||||||||| |||| || |||||||| ||||||| |||||||| ||||| ||| Sbjct: 1452 ttcacgctcttctgcatcatcctcccaatgacgatgtttgtgcctgaagccgagcttcct 1511 Query: 74 gcttgggtggtgtgctacattccagcaaccatgtccttgcttaacatcctcccagcccca 133 | ||||| || ||||||||||| || ||||||||||| |||||||| || | || Sbjct: 1512 gactgggtcgtatgctacattcctgccctgatgtccttgctcaacatcctgccttctccg 1571 Query: 134 aagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaag 193 ||||| ||||| |||||| | || ||||| || || |||||||||||||| ||||| || Sbjct: 1572 aagtctttccctttcatcatcccatacctacttttcgagaacaccatgtccgtgacaaaa 1631 Query: 194 ttcaacgccatgatctccggcttgttccagctcgggagcgcctacgagtgggtcgtcacc 253 ||||| ||||||||||| || |||||||||| || | || ||||||||||| || ||| Sbjct: 1632 ttcaatgccatgatctctggtctgttccagcttggaaatgcatacgagtgggtggtgacc 1691 Query: 254 aagaaatcaggccgttcttcggagggcga 282 ||||| |||||||| || ||||||||||| Sbjct: 1692 aagaagtcaggccgatcatcggagggcga 1720 Score = 69.9 bits (35), Expect = 1e-08 Identities = 101/123 (82%) Strand = Plus / Plus Query: 403 aaagaagaaacacaataggttatacaggaaagaactagcactctccttcctcctcttgac 462 ||||||||| ||||| || |||||| |||||| || |||||||| || |||||| | || Sbjct: 1823 aaagaagaagcacaaccggatatacaagaaagagcttgcactctcattgctcctcctaac 1882 Query: 463 agcagcatctcgcagcctgctgtcggttcagggcatacatttctacttccttctgttcca 522 || ||| ||||||| |||| ||| ||||| ||||||||||||||||| |||||||| Sbjct: 1883 cgctgcagctcgcagtttgctctcgaaacagggtatacatttctacttcctcctgttcca 1942 Query: 523 ggg 525 ||| Sbjct: 1943 ggg 1945
>ref|XM_481033.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2238 Score = 127 bits (64), Expect = 5e-26 Identities = 127/148 (85%) Strand = Plus / Plus Query: 111 tgcttaacatcctcccagccccaaagtccttcccattcatcgttccctaccttctgtttg 170 |||| |||||||| || || || ||||| ||||| ||| || | || ||||| || || | Sbjct: 1709 tgctcaacatcctgccggcgcccaagtcgttccccttcgtcatcccttacctcctcttcg 1768 Query: 171 agaacaccatgtcagtgaccaagttcaacgccatgatctccggcttgttccagctcggga 230 ||||||||||||| || |||||||||||||||||| |||||||| | |||||||| |||| Sbjct: 1769 agaacaccatgtccgtcaccaagttcaacgccatggtctccggcctcttccagctgggga 1828 Query: 231 gcgcctacgagtgggtcgtcaccaagaa 258 || ||||||||||||||||||||||||| Sbjct: 1829 gctcctacgagtgggtcgtcaccaagaa 1856 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 503 ttctacttccttctgttccagggggtgtcgttcctggtcgtcgggctcgacctcatcggc 562 ||||||||||| || |||||||| || | ||||| | |||||| ||||||||||||||| Sbjct: 2164 ttctacttcctcctcttccagggcgtcaccttcctcgccgtcggcctcgacctcatcggc 2223 Query: 563 gagcaggtc 571 ||||||||| Sbjct: 2224 gagcaggtc 2232
>tpg|BK000088.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cellulose synthase-like C3 gene, complete cds Length = 4915 Score = 127 bits (64), Expect = 5e-26 Identities = 127/148 (85%) Strand = Plus / Plus Query: 111 tgcttaacatcctcccagccccaaagtccttcccattcatcgttccctaccttctgtttg 170 |||| |||||||| || || || ||||| ||||| ||| || | || ||||| || || | Sbjct: 3889 tgctcaacatcctgccggcgcccaagtcgttccccttcgtcatcccttacctcctcttcg 3948 Query: 171 agaacaccatgtcagtgaccaagttcaacgccatgatctccggcttgttccagctcggga 230 ||||||||||||| || |||||||||||||||||| |||||||| | |||||||| |||| Sbjct: 3949 agaacaccatgtccgtcaccaagttcaacgccatggtctccggcctcttccagctgggga 4008 Query: 231 gcgcctacgagtgggtcgtcaccaagaa 258 || ||||||||||||||||||||||||| Sbjct: 4009 gctcctacgagtgggtcgtcaccaagaa 4036 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 503 ttctacttccttctgttccagggggtgtcgttcctggtcgtcgggctcgacctcatcggc 562 ||||||||||| || |||||||| || | ||||| | |||||| ||||||||||||||| Sbjct: 4344 ttctacttcctcctcttccagggcgtcaccttcctcgccgtcggcctcgacctcatcggc 4403 Query: 563 gagcaggtc 571 ||||||||| Sbjct: 4404 gagcaggtc 4412
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 127 bits (64), Expect = 5e-26 Identities = 127/148 (85%) Strand = Plus / Plus Query: 111 tgcttaacatcctcccagccccaaagtccttcccattcatcgttccctaccttctgtttg 170 |||| |||||||| || || || ||||| ||||| ||| || | || ||||| || || | Sbjct: 9380452 tgctcaacatcctgccggcgcccaagtcgttccccttcgtcatcccttacctcctcttcg 9380511 Query: 171 agaacaccatgtcagtgaccaagttcaacgccatgatctccggcttgttccagctcggga 230 ||||||||||||| || |||||||||||||||||| |||||||| | |||||||| |||| Sbjct: 9380512 agaacaccatgtccgtcaccaagttcaacgccatggtctccggcctcttccagctgggga 9380571 Query: 231 gcgcctacgagtgggtcgtcaccaagaa 258 || ||||||||||||||||||||||||| Sbjct: 9380572 gctcctacgagtgggtcgtcaccaagaa 9380599 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 503 ttctacttccttctgttccagggggtgtcgttcctggtcgtcgggctcgacctcatcggc 562 ||||||||||| || |||||||| || | ||||| | |||||| ||||||||||||||| Sbjct: 9380907 ttctacttcctcctcttccagggcgtcaccttcctcgccgtcggcctcgacctcatcggc 9380966 Query: 563 gagcaggtc 571 ||||||||| Sbjct: 9380967 gagcaggtc 9380975
>dbj|AP004155.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1112_D12 Length = 97572 Score = 127 bits (64), Expect = 5e-26 Identities = 127/148 (85%) Strand = Plus / Plus Query: 111 tgcttaacatcctcccagccccaaagtccttcccattcatcgttccctaccttctgtttg 170 |||| |||||||| || || || ||||| ||||| ||| || | || ||||| || || | Sbjct: 5043 tgctcaacatcctgccggcgcccaagtcgttccccttcgtcatcccttacctcctcttcg 5102 Query: 171 agaacaccatgtcagtgaccaagttcaacgccatgatctccggcttgttccagctcggga 230 ||||||||||||| || |||||||||||||||||| |||||||| | |||||||| |||| Sbjct: 5103 agaacaccatgtccgtcaccaagttcaacgccatggtctccggcctcttccagctgggga 5162 Query: 231 gcgcctacgagtgggtcgtcaccaagaa 258 || ||||||||||||||||||||||||| Sbjct: 5163 gctcctacgagtgggtcgtcaccaagaa 5190 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 503 ttctacttccttctgttccagggggtgtcgttcctggtcgtcgggctcgacctcatcggc 562 ||||||||||| || |||||||| || | ||||| | |||||| ||||||||||||||| Sbjct: 5498 ttctacttcctcctcttccagggcgtcaccttcctcgccgtcggcctcgacctcatcggc 5557 Query: 563 gagcaggtc 571 ||||||||| Sbjct: 5558 gagcaggtc 5566
>dbj|AP004013.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1575_B01 Length = 86158 Score = 127 bits (64), Expect = 5e-26 Identities = 127/148 (85%) Strand = Plus / Plus Query: 111 tgcttaacatcctcccagccccaaagtccttcccattcatcgttccctaccttctgtttg 170 |||| |||||||| || || || ||||| ||||| ||| || | || ||||| || || | Sbjct: 56681 tgctcaacatcctgccggcgcccaagtcgttccccttcgtcatcccttacctcctcttcg 56740 Query: 171 agaacaccatgtcagtgaccaagttcaacgccatgatctccggcttgttccagctcggga 230 ||||||||||||| || |||||||||||||||||| |||||||| | |||||||| |||| Sbjct: 56741 agaacaccatgtccgtcaccaagttcaacgccatggtctccggcctcttccagctgggga 56800 Query: 231 gcgcctacgagtgggtcgtcaccaagaa 258 || ||||||||||||||||||||||||| Sbjct: 56801 gctcctacgagtgggtcgtcaccaagaa 56828 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 503 ttctacttccttctgttccagggggtgtcgttcctggtcgtcgggctcgacctcatcggc 562 ||||||||||| || |||||||| || | ||||| | |||||| ||||||||||||||| Sbjct: 57136 ttctacttcctcctcttccagggcgtcaccttcctcgccgtcggcctcgacctcatcggc 57195 Query: 563 gagcaggtc 571 ||||||||| Sbjct: 57196 gagcaggtc 57204
>dbj|AK108045.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-E05, full insert sequence Length = 1795 Score = 127 bits (64), Expect = 5e-26 Identities = 127/148 (85%) Strand = Plus / Plus Query: 111 tgcttaacatcctcccagccccaaagtccttcccattcatcgttccctaccttctgtttg 170 |||| |||||||| || || || ||||| ||||| ||| || | || ||||| || || | Sbjct: 921 tgctcaacatcctgccggcgcccaagtcgttccccttcgtcatcccttacctcctcttcg 980 Query: 171 agaacaccatgtcagtgaccaagttcaacgccatgatctccggcttgttccagctcggga 230 ||||||||||||| || |||||||||||||||||| |||||||| | |||||||| |||| Sbjct: 981 agaacaccatgtccgtcaccaagttcaacgccatggtctccggcctcttccagctgggga 1040 Query: 231 gcgcctacgagtgggtcgtcaccaagaa 258 || ||||||||||||||||||||||||| Sbjct: 1041 gctcctacgagtgggtcgtcaccaagaa 1068 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 503 ttctacttccttctgttccagggggtgtcgttcctggtcgtcgggctcgacctcatcggc 562 ||||||||||| || |||||||| || | ||||| | |||||| ||||||||||||||| Sbjct: 1376 ttctacttcctcctcttccagggcgtcaccttcctcgccgtcggcctcgacctcatcggc 1435 Query: 563 gagcaggtc 571 ||||||||| Sbjct: 1436 gagcaggtc 1444
>ref|NM_116866.2| Arabidopsis thaliana ATCSLC12; transferase, transferring glycosyl groups AT4G07960 (ATCSLC12) mRNA, complete cds Length = 2622 Score = 105 bits (53), Expect = 2e-19 Identities = 173/213 (81%) Strand = Plus / Plus Query: 13 attcactctcttctgcgtcatacttccaatgacaatgtttgctcctgaagcagagctacc 72 |||||||||||| || | || || |||||||| ||||||| || ||||| ||||| || Sbjct: 1786 attcactctcttttgtattatcctgccaatgactatgtttgtacccgaagctgagcttcc 1845 Query: 73 tgcttgggtggtgtgctacattccagcaaccatgtccttgcttaacatcctcccagcccc 132 |||||||| || |||||||| || || || ||||| || || |||||||| || ||||| Sbjct: 1846 cgcttgggttgtttgctacatacctgccacaatgtctttcctcaacatccttcccgcccc 1905 Query: 133 aaagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaa 192 ||||| || || || ||||| || |||||||| ||||||||||| ||||| ||||| || Sbjct: 1906 gaagtcgtttccgtttatcgtcccgtaccttctctttgagaacacaatgtctgtgactaa 1965 Query: 193 gttcaacgccatgatctccggcttgttccagct 225 ||||||||| ||| |||| || ||||| ||||| Sbjct: 1966 gttcaacgcaatggtctcgggtttgtttcagct 1998
>gb|BT008770.1| Arabidopsis thaliana At4g07960 gene, complete cds Length = 2100 Score = 105 bits (53), Expect = 2e-19 Identities = 173/213 (81%) Strand = Plus / Plus Query: 13 attcactctcttctgcgtcatacttccaatgacaatgtttgctcctgaagcagagctacc 72 |||||||||||| || | || || |||||||| ||||||| || ||||| ||||| || Sbjct: 1551 attcactctcttttgtattatcctgccaatgactatgtttgtacccgaagctgagcttcc 1610 Query: 73 tgcttgggtggtgtgctacattccagcaaccatgtccttgcttaacatcctcccagcccc 132 |||||||| || |||||||| || || || ||||| || || |||||||| || ||||| Sbjct: 1611 cgcttgggttgtttgctacatacctgccacaatgtctttcctcaacatccttcccgcccc 1670 Query: 133 aaagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaa 192 ||||| || || || ||||| || |||||||| ||||||||||| ||||| ||||| || Sbjct: 1671 gaagtcgtttccgtttatcgtcccgtaccttctctttgagaacacaatgtctgtgactaa 1730 Query: 193 gttcaacgccatgatctccggcttgttccagct 225 ||||||||| ||| |||| || ||||| ||||| Sbjct: 1731 gttcaacgcaatggtctcgggtttgtttcagct 1763
>emb|AL161508.2|ATCHRIV20 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 20 Length = 196517 Score = 105 bits (53), Expect = 2e-19 Identities = 173/213 (81%) Strand = Plus / Minus Query: 13 attcactctcttctgcgtcatacttccaatgacaatgtttgctcctgaagcagagctacc 72 |||||||||||| || | || || |||||||| ||||||| || ||||| ||||| || Sbjct: 152465 attcactctcttttgtattatcctgccaatgactatgtttgtacccgaagctgagcttcc 152406 Query: 73 tgcttgggtggtgtgctacattccagcaaccatgtccttgcttaacatcctcccagcccc 132 |||||||| || |||||||| || || || ||||| || || |||||||| || ||||| Sbjct: 152405 cgcttgggttgtttgctacatacctgccacaatgtctttcctcaacatccttcccgcccc 152346 Query: 133 aaagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaa 192 ||||| || || || ||||| || |||||||| ||||||||||| ||||| ||||| || Sbjct: 152345 gaagtcgtttccgtttatcgtcccgtaccttctctttgagaacacaatgtctgtgactaa 152286 Query: 193 gttcaacgccatgatctccggcttgttccagct 225 ||||||||| ||| |||| || ||||| ||||| Sbjct: 152285 gttcaacgcaatggtctcgggtttgtttcagct 152253
>gb|AY087066.1| Arabidopsis thaliana clone 3126 mRNA, complete sequence Length = 2479 Score = 105 bits (53), Expect = 2e-19 Identities = 173/213 (81%) Strand = Plus / Plus Query: 13 attcactctcttctgcgtcatacttccaatgacaatgtttgctcctgaagcagagctacc 72 |||||||||||| || | || || |||||||| ||||||| || ||||| ||||| || Sbjct: 1642 attcactctcttttgtattatcctgccaatgactatgtttgtacccgaagctgagcttcc 1701 Query: 73 tgcttgggtggtgtgctacattccagcaaccatgtccttgcttaacatcctcccagcccc 132 |||||||| || |||||||| || || || ||||| || || |||||||| || ||||| Sbjct: 1702 cgcttgggttgtttgctacatacctgccacaatgtctttcctcaacatccttcccgcccc 1761 Query: 133 aaagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaa 192 ||||| || || || ||||| || |||||||| ||||||||||| ||||| ||||| || Sbjct: 1762 gaagtcgtttccgtttatcgtcccgtaccttctctttgagaacacaatgtctgtgactaa 1821 Query: 193 gttcaacgccatgatctccggcttgttccagct 225 ||||||||| ||| |||| || ||||| ||||| Sbjct: 1822 gttcaacgcaatggtctcgggtttgtttcagct 1854
>dbj|AK118480.1| Arabidopsis thaliana At4g07960 mRNA for putative glucosyltransferase, complete cds, clone: RAFL19-71-L23 Length = 2668 Score = 105 bits (53), Expect = 2e-19 Identities = 173/213 (81%) Strand = Plus / Plus Query: 13 attcactctcttctgcgtcatacttccaatgacaatgtttgctcctgaagcagagctacc 72 |||||||||||| || | || || |||||||| ||||||| || ||||| ||||| || Sbjct: 1832 attcactctcttttgtattatcctgccaatgactatgtttgtacccgaagctgagcttcc 1891 Query: 73 tgcttgggtggtgtgctacattccagcaaccatgtccttgcttaacatcctcccagcccc 132 |||||||| || |||||||| || || || ||||| || || |||||||| || ||||| Sbjct: 1892 cgcttgggttgtttgctacatacctgccacaatgtctttcctcaacatccttcccgcccc 1951 Query: 133 aaagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaa 192 ||||| || || || ||||| || |||||||| ||||||||||| ||||| ||||| || Sbjct: 1952 gaagtcgtttccgtttatcgtcccgtaccttctctttgagaacacaatgtctgtgactaa 2011 Query: 193 gttcaacgccatgatctccggcttgttccagct 225 ||||||||| ||| |||| || ||||| ||||| Sbjct: 2012 gttcaacgcaatggtctcgggtttgtttcagct 2044
>gb|AC006266.1|AC006266 Arabidopsis thaliana BAC F1K3 from chromosome IV near 21 cM, complete sequence Length = 105680 Score = 105 bits (53), Expect = 2e-19 Identities = 173/213 (81%) Strand = Plus / Minus Query: 13 attcactctcttctgcgtcatacttccaatgacaatgtttgctcctgaagcagagctacc 72 |||||||||||| || | || || |||||||| ||||||| || ||||| ||||| || Sbjct: 23884 attcactctcttttgtattatcctgccaatgactatgtttgtacccgaagctgagcttcc 23825 Query: 73 tgcttgggtggtgtgctacattccagcaaccatgtccttgcttaacatcctcccagcccc 132 |||||||| || |||||||| || || || ||||| || || |||||||| || ||||| Sbjct: 23824 cgcttgggttgtttgctacatacctgccacaatgtctttcctcaacatccttcccgcccc 23765 Query: 133 aaagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaa 192 ||||| || || || ||||| || |||||||| ||||||||||| ||||| ||||| || Sbjct: 23764 gaagtcgtttccgtttatcgtcccgtaccttctctttgagaacacaatgtctgtgactaa 23705 Query: 193 gttcaacgccatgatctccggcttgttccagct 225 ||||||||| ||| |||| || ||||| ||||| Sbjct: 23704 gttcaacgcaatggtctcgggtttgtttcagct 23672
>gb|AY112276.1| Zea mays CL8951_1 mRNA sequence Length = 868 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 170 gagaacaccatgtcagtgaccaagttcaacgccatgatctccggcttgttccagctcggg 229 |||||||||||||| || ||||| |||||||| ||| | ||||| ||||| | |||||| Sbjct: 820 gagaacaccatgtctgttaccaaattcaacgcaatggtgtccggtctgttcaaactcggg 761 Query: 230 agcgcctacgagtgggtcgtcaccaagaaatcaggccg 267 ||| ||||||| ||||| ||||||||||| || ||||| Sbjct: 760 agctcctacgaatgggttgtcaccaagaagtctggccg 723 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 490 tcagggcatacatttctacttccttctgttccagggggtgtcgttcct 537 |||||| || ||||||||||||||||||||||||||| |||| ||||| Sbjct: 491 tcaggggattcatttctacttccttctgttccaggggatgtcattcct 444
>ref|NM_113737.2| Arabidopsis thaliana ATCSLC04; transferase, transferring glycosyl groups AT3G28180 (ATCSLC04) mRNA, complete cds Length = 2475 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 158 taccttctgtttgagaacaccatgtcagtgaccaagttcaacgccatgatctccgg 213 |||||||| || || ||||| |||||| | |||||||||||||||||||||||||| Sbjct: 1851 taccttcttttcgaaaacacaatgtcaataaccaagttcaacgccatgatctccgg 1906
>gb|AY091433.1| Arabidopsis thaliana unknown protein (At3g28180) mRNA, complete cds Length = 2053 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 158 taccttctgtttgagaacaccatgtcagtgaccaagttcaacgccatgatctccgg 213 |||||||| || || ||||| |||||| | |||||||||||||||||||||||||| Sbjct: 1570 taccttcttttcgaaaacacaatgtcaataaccaagttcaacgccatgatctccgg 1625
>gb|AY056286.1| Arabidopsis thaliana unknown protein (At3g28180) mRNA, complete cds Length = 2485 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 158 taccttctgtttgagaacaccatgtcagtgaccaagttcaacgccatgatctccgg 213 |||||||| || || ||||| |||||| | |||||||||||||||||||||||||| Sbjct: 1851 taccttcttttcgaaaacacaatgtcaataaccaagttcaacgccatgatctccgg 1906
>emb|BX823735.1|CNS0A5A4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS70ZE12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 726 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 158 taccttctgtttgagaacaccatgtcagtgaccaagttcaacgccatgatctccgg 213 |||||||| || || ||||| |||||| | |||||||||||||||||||||||||| Sbjct: 222 taccttcttttcgaaaacacaatgtcaataaccaagttcaacgccatgatctccgg 277
>emb|BX823248.1|CNS0A4NS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZA12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1449 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 158 taccttctgtttgagaacaccatgtcagtgaccaagttcaacgccatgatctccgg 213 |||||||| || || ||||| |||||| | |||||||||||||||||||||||||| Sbjct: 880 taccttcttttcgaaaacacaatgtcaataaccaagttcaacgccatgatctccgg 935
>dbj|AP000415.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MIG10 Length = 31712 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 158 taccttctgtttgagaacaccatgtcagtgaccaagttcaacgccatgatctccgg 213 |||||||| || || ||||| |||||| | |||||||||||||||||||||||||| Sbjct: 23123 taccttcttttcgaaaacacaatgtcaataaccaagttcaacgccatgatctccgg 23178
>ref|NM_128024.2| Arabidopsis thaliana ATCSLC08; transferase, transferring glycosyl groups AT2G24630 (ATCSLC08) mRNA, complete cds Length = 2714 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 131 ccaaagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgacc 190 |||||||| ||||| ||||| || || ||||| ||||||||||||| ||||| || ||| Sbjct: 2013 ccaaagtctttccctttcattgtcccttacctattgtttgagaacactatgtcggtcacc 2072 Query: 191 aagttcaacgc 201 ||||||||||| Sbjct: 2073 aagttcaacgc 2083
>gb|AC006954.8| Arabidopsis thaliana chromosome 2 clone F25P17 map mi238, complete sequence Length = 93701 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 131 ccaaagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtcagtgacc 190 |||||||| ||||| ||||| || || ||||| ||||||||||||| ||||| || ||| Sbjct: 33704 ccaaagtctttccctttcattgtcccttacctattgtttgagaacactatgtcggtcacc 33763 Query: 191 aagttcaacgc 201 ||||||||||| Sbjct: 33764 aagttcaacgc 33774
>ref|NM_111612.3| Arabidopsis thaliana ATCSLC06; transferase, transferring glycosyl groups AT3G07330 (ATCSLC06) mRNA, complete cds Length = 2716 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 116 aacatcctcccagccccaaagtccttcccattcatcgttccctaccttctgtttgagaac 175 |||||| |||||||||||| |||||||| ||||| ||||| || || || || || ||| Sbjct: 1752 aacatcatcccagccccaagatccttccctttcatagttccgtatctccttttcgaaaac 1811 Query: 176 accatgtcagtgaccaa 192 ||||||||||| ||||| Sbjct: 1812 accatgtcagttaccaa 1828 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 13 attcactctcttctgcgtcatacttcca 40 |||||| |||||||||||||| |||||| Sbjct: 1649 attcacgctcttctgcgtcattcttcca 1676
>gb|AC009853.4|ATAC009853 Arabidopsis thaliana chromosome III BAC F21O3 genomic sequence, complete sequence Length = 90112 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 116 aacatcctcccagccccaaagtccttcccattcatcgttccctaccttctgtttgagaac 175 |||||| |||||||||||| |||||||| ||||| ||||| || || || || || ||| Sbjct: 11326 aacatcatcccagccccaagatccttccctttcatagttccgtatctccttttcgaaaac 11267 Query: 176 accatgtcagtgaccaa 192 ||||||||||| ||||| Sbjct: 11266 accatgtcagttaccaa 11250 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 13 attcactctcttctgcgtcatacttcca 40 |||||| |||||||||||||| |||||| Sbjct: 11429 attcacgctcttctgcgtcattcttcca 11402
>gb|AY142677.1| Arabidopsis thaliana unknown protein (At3g07330) mRNA, complete cds Length = 2080 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 116 aacatcctcccagccccaaagtccttcccattcatcgttccctaccttctgtttgagaac 175 |||||| |||||||||||| |||||||| ||||| ||||| || || || || || ||| Sbjct: 1594 aacatcatcccagccccaagatccttccctttcatagttccgtatctccttttcgaaaac 1653 Query: 176 accatgtcagtgaccaa 192 ||||||||||| ||||| Sbjct: 1654 accatgtcagttaccaa 1670 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 13 attcactctcttctgcgtcatacttcca 40 |||||| |||||||||||||| |||||| Sbjct: 1491 attcacgctcttctgcgtcattcttcca 1518
>gb|AY070454.1| Arabidopsis thaliana unknown protein (At3g07330) mRNA, complete cds Length = 2542 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 116 aacatcctcccagccccaaagtccttcccattcatcgttccctaccttctgtttgagaac 175 |||||| |||||||||||| |||||||| ||||| ||||| || || || || || ||| Sbjct: 1677 aacatcatcccagccccaagatccttccctttcatagttccgtatctccttttcgaaaac 1736 Query: 176 accatgtcagtgaccaa 192 ||||||||||| ||||| Sbjct: 1737 accatgtcagttaccaa 1753 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 13 attcactctcttctgcgtcatacttcca 40 |||||| |||||||||||||| |||||| Sbjct: 1574 attcacgctcttctgcgtcattcttcca 1601
>gb|AC171266.22| Medicago truncatula clone mth2-14o4, complete sequence Length = 137052 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 125 ccagccccaaagtccttcccattcatcgttccctaccttctgtttgagaacaccatgtca 184 ||||||||| ||| |||||||| || || || || ||||| ||||||||||| |||||| Sbjct: 59408 ccagccccacggtcattcccatttatagtgccttatcttctatttgagaacactatgtca 59349 Query: 185 gtgaccaagttcaacgccatgatctccgg 213 || || ||||| || || ||||| ||||| Sbjct: 59348 gtaactaagtttaatgcaatgatatccgg 59320
>tpg|BK000087.1| TPA: TPA_exp: Oryza sativa (indica cultivar-group) cellulose synthase-like C2 gene, complete cds Length = 2589 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 170 gagaacaccatgtcagtgaccaagttcaacgc 201 |||||||||||||||||||| || |||||||| Sbjct: 1794 gagaacaccatgtcagtgacaaaattcaacgc 1825
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 170 gagaacaccatgtcagtgaccaagttcaacgc 201 |||||||||||||||||||| || |||||||| Sbjct: 15492515 gagaacaccatgtcagtgacaaaattcaacgc 15492484
>gb|AF435650.1| Oryza sativa CSLC2 mRNA, partial cds Length = 1841 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 170 gagaacaccatgtcagtgaccaagttcaacgc 201 |||||||||||||||||||| || |||||||| Sbjct: 1046 gagaacaccatgtcagtgacaaaattcaacgc 1077
>dbj|AP005886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0689B09 Length = 144932 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 170 gagaacaccatgtcagtgaccaagttcaacgc 201 |||||||||||||||||||| || |||||||| Sbjct: 13370 gagaacaccatgtcagtgacaaaattcaacgc 13339
>dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1299_A11 Length = 160099 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 170 gagaacaccatgtcagtgaccaagttcaacgc 201 |||||||||||||||||||| || |||||||| Sbjct: 141807 gagaacaccatgtcagtgacaaaattcaacgc 141776
>emb|AJ748832.1| Streptomyces lividus lividomycin biosynthesis gene cluster Length = 40579 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 277 gggcgatctcgtcgccctcgtcgagaa 303 |||||| |||||||||||||||||||| Sbjct: 8077 gggcgacctcgtcgccctcgtcgagaa 8103
>gb|AC131748.3| Mus musculus BAC clone RP23-42A17 from 12, complete sequence Length = 215972 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 432 aagaactagcactctccttcctcctc 457 |||||||||||| ||||||||||||| Sbjct: 55106 aagaactagcaccctccttcctcctc 55081
>gb|AC152059.4| Mus musculus BAC clone RP24-283B23 from chromosome 12, complete sequence Length = 180085 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 432 aagaactagcactctccttcctcctc 457 |||||||||||| ||||||||||||| Sbjct: 177786 aagaactagcaccctccttcctcctc 177761
>emb|AL583892.13| Mouse DNA sequence from clone RP23-32G7 on chromosome 15, complete sequence Length = 216733 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 432 aagaactagcactctccttcctcctc 457 |||||||||||| ||||||||||||| Sbjct: 136541 aagaactagcaccctccttcctcctc 136566
>emb|AL390056.7| Human DNA sequence from clone RP3-493I16 on chromosome 6 Contains the 5' end of the RAB3IP2 gene for RAB3 interacting protein 2 and a CpG island, complete sequence Length = 62390 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 498 tacatttctacttccttctgt 518 ||||||||||||||||||||| Sbjct: 22478 tacatttctacttccttctgt 22498
>gb|AC023503.23| Homo sapiens 3 BAC RP11-217I10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160370 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 tggtgtgctacattccagcaa 101 ||||||||||||||||||||| Sbjct: 100103 tggtgtgctacattccagcaa 100083
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 285 tcgtcgccctcgtcgagaacg 305 ||||||||||||||||||||| Sbjct: 930002 tcgtcgccctcgtcgagaacg 930022
>gb|AC084633.1|CBRG45G04 Caenorhabditis briggsae cosmid G45G04, complete sequence Length = 43840 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 137 tccttcccattcatcgttccctaccttct 165 |||||| |||||||||||| ||||||||| Sbjct: 37424 tccttcacattcatcgttcactaccttct 37452
>dbj|AK107327.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-E12, full insert sequence Length = 1584 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 467 gcatctcgcagcctgctgtcg 487 ||||||||||||||||||||| Sbjct: 663 gcatctcgcagcctgctgtcg 683
>emb|AL671392.5| Human DNA sequence from clone XXbac-92L3 on chromosome 6, complete sequence Length = 62014 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 498 tacatttctacttccttctgt 518 ||||||||||||||||||||| Sbjct: 30004 tacatttctacttccttctgt 29984
>ref|NM_124465.4| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT5G50870 mRNA, complete cds Length = 800 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 391 tcccaaacccaaaaagaagaaaca 414 |||||||||| ||||||||||||| Sbjct: 52 tcccaaaccctaaaagaagaaaca 29
>emb|CR694001.2|CNS0FYFX Tetraodon nigroviridis full-length cDNA Length = 1208 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 caaacccaaaaagaagaaac 413 |||||||||||||||||||| Sbjct: 1045 caaacccaaaaagaagaaac 1064
>emb|CR691423.2|CNS0FWGB Tetraodon nigroviridis full-length cDNA Length = 1311 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 caaacccaaaaagaagaaac 413 |||||||||||||||||||| Sbjct: 1087 caaacccaaaaagaagaaac 1106
>emb|CR690576.1|CNS0FVSS Tetraodon nigroviridis full-length cDNA Length = 1298 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 caaacccaaaaagaagaaac 413 |||||||||||||||||||| Sbjct: 1085 caaacccaaaaagaagaaac 1104
>emb|CR688834.2|CNS0FUGE Tetraodon nigroviridis full-length cDNA Length = 1268 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 caaacccaaaaagaagaaac 413 |||||||||||||||||||| Sbjct: 1006 caaacccaaaaagaagaaac 987
>emb|AL606526.10| Human DNA sequence from clone RP13-534F18 on chromosome 1, complete sequence Length = 113654 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 caaagtccttcccattcatc 151 |||||||||||||||||||| Sbjct: 59038 caaagtccttcccattcatc 59019
>emb|AL606462.5| Human DNA sequence from clone CTD-2090I13 on chromosome 1 Contains a novel gene, a nuclear ubiquitous casein kinase and cyclin-dependent kinase substrate (NUCKS) pseudogene, a ribosomal protein S18 (RPS18) pseudogene and a pseudogene similar to part ofbasic transcription factor 3 (BTF3), complete sequence Length = 112401 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 gcactctccttcctcctctt 459 |||||||||||||||||||| Sbjct: 90693 gcactctccttcctcctctt 90674
>emb|AL512323.8| Human DNA sequence from clone RP13-445B20 on chromosome 6, complete sequence Length = 205043 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 610 tttttctctttctcatttgataaa 633 |||||||||||| ||||||||||| Sbjct: 157020 tttttctctttcacatttgataaa 156997
>emb|AL450322.17| Human DNA sequence from clone RP11-184A2 on chromosome 10 Contains the 3' end of the COPEB gene for core promoter element binding protein (GBF ZF9 Zf9 BCD1 CPBP KLF6) and two novel genes, complete sequence Length = 94162 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 tataatggatttttctcttt 620 |||||||||||||||||||| Sbjct: 50148 tataatggatttttctcttt 50129
>emb|AL356213.10| Human DNA sequence from clone RP5-1171F9 on chromosome Xq23-25 Contains part of the GRIA3 gene for glutamate receptor, ionotrophic, AMPA 3, complete sequence Length = 87793 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 609 atttttctctttctcatttg 628 |||||||||||||||||||| Sbjct: 49289 atttttctctttctcatttg 49308
>emb|AL133355.13| Human DNA sequence from clone RP11-541N10 on chromosome 10 Contains the 5' end of the SH3MD1 gene for SH3 multiple domains 1, a novel gene and two CpG islands, complete sequence Length = 190882 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 gaagccatccaagcagcaga 326 |||||||||||||||||||| Sbjct: 54232 gaagccatccaagcagcaga 54213
>ref|XM_777831.1| PREDICTED: Strongylocentrotus purpuratus similar to CG7449-PA, isoform A (LOC577616), mRNA Length = 3681 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 cactctccttcctcctcttg 460 |||||||||||||||||||| Sbjct: 2219 cactctccttcctcctcttg 2200
>gb|AY065303.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme (At5g50870) mRNA, complete cds Length = 811 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 391 tcccaaacccaaaaagaagaaaca 414 |||||||||| ||||||||||||| Sbjct: 52 tcccaaaccctaaaagaagaaaca 29
>gb|AC016398.6| Homo sapiens chromosome 10 clone RP11-561G1, complete sequence Length = 158817 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 ggtgtgctacattccagcaa 101 |||||||||||||||||||| Sbjct: 77436 ggtgtgctacattccagcaa 77455
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 gggcgatctcgtcgccctcgtcga 300 |||||||||||||| ||||||||| Sbjct: 4041445 gggcgatctcgtcgacctcgtcga 4041422
>gb|AC010139.4|AC010139 Homo sapiens BAC clone RP11-194G10 from 3, complete sequence Length = 161407 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 613 ttctctttctcatttgataa 632 |||||||||||||||||||| Sbjct: 23989 ttctctttctcatttgataa 24008
>emb|BX823762.1|CNS0A7E9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS72ZH10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2533 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 13 attcactctcttctgcgtcatacttcca 40 |||||| |||||||||||||| |||||| Sbjct: 1595 attcacgctcttctgcgtcattcttcca 1622
>emb|BX834060.1|CNS09YYK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL92ZH05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 791 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 391 tcccaaacccaaaaagaagaaaca 414 |||||||||| ||||||||||||| Sbjct: 43 tcccaaaccctaaaagaagaaaca 20
>gb|AC092704.10| Homo sapiens chromosome 18, clone RP11-687D19, complete sequence Length = 185257 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 605 atggatttttctctttctca 624 |||||||||||||||||||| Sbjct: 98355 atggatttttctctttctca 98336
>dbj|AB017063.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K3K7 Length = 68726 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 391 tcccaaacccaaaaagaagaaaca 414 |||||||||| ||||||||||||| Sbjct: 3514 tcccaaaccctaaaagaagaaaca 3537
>emb|AJ400859.1|CAR400859 Cicer arietinum partial mRNA for putative glucosyltransferase Length = 2416 Score = 40.1 bits (20), Expect = 8.9 Identities = 47/56 (83%) Strand = Plus / Plus Query: 143 ccattcatcgttccctaccttctgtttgagaacaccatgtcagtgaccaagttcaa 198 ||||| ||||||||||| || || ||||| ||||| ||||| ||||| || ||||| Sbjct: 1330 ccatttatcgttccctatctcctttttgaaaacacaatgtctgtgactaaattcaa 1385
>gb|BC089213.1| Rattus norvegicus glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1, mRNA (cDNA clone MGC:105526 IMAGE:7302358), complete cds Length = 1965 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 tgtcagtgaccaagttcaacgcca 203 |||||||||||||||||| ||||| Sbjct: 1802 tgtcagtgaccaagttcaccgcca 1825
>ref|NM_001014034.1| Rattus norvegicus glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 (Qrsl1), mRNA Length = 1965 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 tgtcagtgaccaagttcaacgcca 203 |||||||||||||||||| ||||| Sbjct: 1802 tgtcagtgaccaagttcaccgcca 1825
>gb|AC100244.12| Mus musculus chromosome 8, clone RP23-64K12, complete sequence Length = 212430 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 608 gatttttctctttctcattt 627 |||||||||||||||||||| Sbjct: 39464 gatttttctctttctcattt 39483
>emb|AL670290.13| Mouse DNA sequence from clone RP23-309M8 on chromosome 4, complete sequence Length = 174638 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 aaaagaagaaacacaatagg 421 |||||||||||||||||||| Sbjct: 107044 aaaagaagaaacacaatagg 107025 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,303,771 Number of Sequences: 3902068 Number of extensions: 6303771 Number of successful extensions: 137534 Number of sequences better than 10.0: 85 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 136928 Number of HSP's gapped (non-prelim): 597 length of query: 652 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 629 effective length of database: 17,143,297,704 effective search space: 10783134255816 effective search space used: 10783134255816 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
