ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags36p04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190764.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1995 Score = 287 bits (145), Expect = 2e-74 Identities = 346/413 (83%) Strand = Plus / Plus Query: 35 tgattgctgctgcatttggtggaacattgcctcctggagtgactggtaccaatgatcgct 94 |||| |||||||| ||||||||||||||||||||||||||| |||| | |||||| || | Sbjct: 1370 tgatcgctgctgcttttggtggaacattgcctcctggagtgtctggcatcaatgaccgtt 1429 Query: 95 gcacacttatagttagcaatttgaacagtgataaaatcgatgcggataagctgttcaatc 154 |||||||| ||||||||||| |||||| ||||||||| |||| ||||||||| ||||| | Sbjct: 1430 gcacacttctagttagcaatctgaacactgataaaattgatgaggataagctcttcaacc 1489 Query: 155 tattttctatttatggaaatatagtgagaatcaaggtactccgcaataaaccagaccatg 214 | || || || ||||| ||||| ||| | |||||| ||||| ||||||||||| |||| Sbjct: 1490 ttttctcaatgtatgggaatatcgtgcgtatcaagatactcaaaaataaaccagatcatg 1549 Query: 215 ccctcgtccagatggctgatgggcttcagaccgagcttgctatacactatttaaagggag 274 ||||| ||||||||||||| ||||||||| | ||||||||| ||| ||||||||||||| Sbjct: 1550 ccctcatccagatggctgacgggcttcaggctgagcttgctgtactgtatttaaagggag 1609 Query: 275 caatgttacttgggcagaaactggaagtgaacttctctaagtacccgagtattacccctg 334 ||||| || | || |||| || |||||||||| ||| |||||||| | |||| ||| Sbjct: 1610 caatgctattcggaaagaagcttgaagtgaactactccaagtacccaaccgttactgctg 1669 Query: 335 ctcctgatgcacatgactactcaacctccaaccttaaccggttcaacagtaatgtggcga 394 ||| ||||||| |||||||||||| || |||| ||| | || ||||| ||||||| || Sbjct: 1670 atccagatgcacgtgactactcaacttctcacctcaacagatttaacagcaatgtggtga 1729 Query: 395 agaactaccgccattgctgtgctccgaccaagatcatccacatctcagcgctt 447 ||||||||||||| || || || || |||||||| |||||||||||||||||| Sbjct: 1730 agaactaccgccactgttgcgccccaaccaagatgatccacatctcagcgctt 1782 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 487 ggtgagcatggcaccatcgtcaagtcaaagctgtttgaggcgagcggcaagacgcaggct 546 ||||||||||| || |||| ||| |||| ||||| ||| ||| |||||| |||||||| Sbjct: 1822 ggtgagcatgggactatcgccaactcaagactgttcgagacgaacggcaaaacgcaggcc 1881 Query: 547 ctcgtgcagttcgagagcgaggaagaggc 575 || |||| ||| || |||| ||||||||| Sbjct: 1882 cttgtgctgtttgaaagcgtggaagaggc 1910
>dbj|AK069062.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006N01, full insert sequence Length = 1760 Score = 287 bits (145), Expect = 2e-74 Identities = 346/413 (83%) Strand = Plus / Plus Query: 35 tgattgctgctgcatttggtggaacattgcctcctggagtgactggtaccaatgatcgct 94 |||| |||||||| ||||||||||||||||||||||||||| |||| | |||||| || | Sbjct: 850 tgatcgctgctgcttttggtggaacattgcctcctggagtgtctggcatcaatgaccgtt 909 Query: 95 gcacacttatagttagcaatttgaacagtgataaaatcgatgcggataagctgttcaatc 154 |||||||| ||||||||||| |||||| ||||||||| |||| ||||||||| ||||| | Sbjct: 910 gcacacttctagttagcaatctgaacactgataaaattgatgaggataagctcttcaacc 969 Query: 155 tattttctatttatggaaatatagtgagaatcaaggtactccgcaataaaccagaccatg 214 | || || || ||||| ||||| ||| | |||||| ||||| ||||||||||| |||| Sbjct: 970 ttttctcaatgtatgggaatatcgtgcgtatcaagatactcaaaaataaaccagatcatg 1029 Query: 215 ccctcgtccagatggctgatgggcttcagaccgagcttgctatacactatttaaagggag 274 ||||| ||||||||||||| ||||||||| | ||||||||| ||| ||||||||||||| Sbjct: 1030 ccctcatccagatggctgacgggcttcaggctgagcttgctgtactgtatttaaagggag 1089 Query: 275 caatgttacttgggcagaaactggaagtgaacttctctaagtacccgagtattacccctg 334 ||||| || | || |||| || |||||||||| ||| |||||||| | |||| ||| Sbjct: 1090 caatgctattcggaaagaagcttgaagtgaactactccaagtacccaaccgttactgctg 1149 Query: 335 ctcctgatgcacatgactactcaacctccaaccttaaccggttcaacagtaatgtggcga 394 ||| ||||||| |||||||||||| || |||| ||| | || ||||| ||||||| || Sbjct: 1150 atccagatgcacgtgactactcaacttctcacctcaacagatttaacagcaatgtggtga 1209 Query: 395 agaactaccgccattgctgtgctccgaccaagatcatccacatctcagcgctt 447 ||||||||||||| || || || || |||||||| |||||||||||||||||| Sbjct: 1210 agaactaccgccactgttgcgccccaaccaagatgatccacatctcagcgctt 1262 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 487 ggtgagcatggcaccatcgtcaagtcaaagctgtttgaggcgagcggcaagacgcaggct 546 ||||||||||| || |||| ||| |||| ||||| ||| ||| |||||| |||||||| Sbjct: 1302 ggtgagcatgggactatcgccaactcaagactgttcgagacgaacggcaaaacgcaggcc 1361 Query: 547 ctcgtgcagttcgagagcgaggaagaggc 575 || |||| ||| || |||| ||||||||| Sbjct: 1362 cttgtgctgtttgaaagcgtggaagaggc 1390
>dbj|AK066622.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070J15, full insert sequence Length = 1641 Score = 287 bits (145), Expect = 2e-74 Identities = 346/413 (83%) Strand = Plus / Plus Query: 35 tgattgctgctgcatttggtggaacattgcctcctggagtgactggtaccaatgatcgct 94 |||| |||||||| ||||||||||||||||||||||||||| |||| | |||||| || | Sbjct: 731 tgatcgctgctgcttttggtggaacattgcctcctggagtgtctggcatcaatgaccgtt 790 Query: 95 gcacacttatagttagcaatttgaacagtgataaaatcgatgcggataagctgttcaatc 154 |||||||| ||||||||||| |||||| ||||||||| |||| ||||||||| ||||| | Sbjct: 791 gcacacttctagttagcaatctgaacactgataaaattgatgaggataagctcttcaacc 850 Query: 155 tattttctatttatggaaatatagtgagaatcaaggtactccgcaataaaccagaccatg 214 | || || || ||||| ||||| ||| | |||||| ||||| ||||||||||| |||| Sbjct: 851 ttttctcaatgtatgggaatatcgtgcgtatcaagatactcaaaaataaaccagatcatg 910 Query: 215 ccctcgtccagatggctgatgggcttcagaccgagcttgctatacactatttaaagggag 274 ||||| ||||||||||||| ||||||||| | ||||||||| ||| ||||||||||||| Sbjct: 911 ccctcatccagatggctgacgggcttcaggctgagcttgctgtactgtatttaaagggag 970 Query: 275 caatgttacttgggcagaaactggaagtgaacttctctaagtacccgagtattacccctg 334 ||||| || | || |||| || |||||||||| ||| |||||||| | |||| ||| Sbjct: 971 caatgctattcggaaagaagcttgaagtgaactactccaagtacccaaccgttactgctg 1030 Query: 335 ctcctgatgcacatgactactcaacctccaaccttaaccggttcaacagtaatgtggcga 394 ||| ||||||| |||||||||||| || |||| ||| | || ||||| ||||||| || Sbjct: 1031 atccagatgcacgtgactactcaacttctcacctcaacagatttaacagcaatgtggtga 1090 Query: 395 agaactaccgccattgctgtgctccgaccaagatcatccacatctcagcgctt 447 ||||||||||||| || || || || |||||||| |||||||||||||||||| Sbjct: 1091 agaactaccgccactgttgcgccccaaccaagatgatccacatctcagcgctt 1143 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 487 ggtgagcatggcaccatcgtcaagtcaaagctgtttgaggcgagcggcaagacgcaggct 546 ||||||||||| || |||| ||| |||| ||||| ||| ||| |||||| |||||||| Sbjct: 1183 ggtgagcatgggactatcgccaactcaagactgttcgagacgaacggcaaaacgcaggcc 1242 Query: 547 ctcgtgcagttcgagagcgaggaagaggc 575 || |||| ||| || |||| ||||||||| Sbjct: 1243 cttgtgctgtttgaaagcgtggaagaggc 1271
>dbj|AK062260.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-G12, full insert sequence Length = 1088 Score = 280 bits (141), Expect = 5e-72 Identities = 345/413 (83%) Strand = Plus / Plus Query: 35 tgattgctgctgcatttggtggaacattgcctcctggagtgactggtaccaatgatcgct 94 |||| |||||||| ||||||||||||||||||||||||||| |||| | |||||| || | Sbjct: 308 tgatcgctgctgcttttggtggaacattgcctcctggagtgtctggcatcaatgaccgtt 367 Query: 95 gcacacttatagttagcaatttgaacagtgataaaatcgatgcggataagctgttcaatc 154 |||||||| ||||||||||| |||||| ||||||||| |||| ||||||||| ||||| | Sbjct: 368 gcacacttctagttagcaatctgaacactgataaaattgatgaggataagctcttcaacc 427 Query: 155 tattttctatttatggaaatatagtgagaatcaaggtactccgcaataaaccagaccatg 214 | || || || ||||| ||||| ||| | |||||| ||||| ||||||||||| |||| Sbjct: 428 ttttctcaatgtatgggaatatcgtgcgtatcaagatactcaaaaataaaccagatcatg 487 Query: 215 ccctcgtccagatggctgatgggcttcagaccgagcttgctatacactatttaaagggag 274 ||||| ||||||||||||| ||||||||| | ||||||||| ||| ||||||||||||| Sbjct: 488 ccctcatccagatggctgacgggcttcaggctgagcttgctgtactgtatttaaagggag 547 Query: 275 caatgttacttgggcagaaactggaagtgaacttctctaagtacccgagtattacccctg 334 ||||| || | || |||| || |||||||||| ||| |||||||| | |||| ||| Sbjct: 548 caatgctattcggaaagaagcttgaagtgaactactccaagtacccaaccgttactgctg 607 Query: 335 ctcctgatgcacatgactactcaacctccaaccttaaccggttcaacagtaatgtggcga 394 ||| ||||||| |||||||||||| || |||| ||| | || |||| ||||||| || Sbjct: 608 atccagatgcacgtgactactcaacttctcacctcaacagatttgacagcaatgtggtga 667 Query: 395 agaactaccgccattgctgtgctccgaccaagatcatccacatctcagcgctt 447 ||||||||||||| || || || || |||||||| |||||||||||||||||| Sbjct: 668 agaactaccgccactgttgcgccccaaccaagatgatccacatctcagcgctt 720 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 487 ggtgagcatggcaccatcgtcaagtcaaagctgtttgaggcgagcggcaagacgcaggct 546 ||||||||||| || |||| ||| |||| ||||| ||| ||| |||||| |||||||| Sbjct: 760 ggtgagcatgggactatcgccaactcaagactgttcgagacgaacggcaaaacgcaggcc 819 Query: 547 ctcgtgcagttcgagagcgaggaagaggc 575 || |||| ||| || |||| ||||||||| Sbjct: 820 cttgtgctgtttgaaagcgtggaagaggc 848
>gb|AY105722.1| Zea mays PCO067271 mRNA sequence Length = 1012 Score = 192 bits (97), Expect = 9e-46 Identities = 326/403 (80%) Strand = Plus / Plus Query: 35 tgattgctgctgcatttggtggaacattgcctcctggagtgactggtaccaatgatcgct 94 ||||||| ||||||||||||||||| || |||| ||||||||||||||||||||| || | Sbjct: 91 tgattgcggctgcatttggtggaactttacctcatggagtgactggtaccaatgaacggt 150 Query: 95 gcacacttatagttagcaatttgaacagtgataaaatcgatgcggataagctgttcaatc 154 ||||||| || || || ||| |||| | ||||||||| |||| ||||||||| ||||||| Sbjct: 151 gcacactcatcgtcagtaatctgaatactgataaaattgatgaggataagcttttcaatc 210 Query: 155 tattttctatttatggaaatatagtgagaatcaaggtactccgcaataaaccagaccatg 214 | |||| | |||||||| ||||| |||||||| |||| || || |||||||| |||| Sbjct: 211 tgntttccntgtatggaaacatagtacgaatcaagatactgcgtaacaaaccagatcatg 270 Query: 215 ccctcgtccagatggctgatgggcttcagaccgagcttgctatacactatttaaagggag 274 | || || |||||||||||||| | ||| | ||||| ||| | || ||||| ||||| Sbjct: 271 cacttgttgagatggctgatgggttgcaggcagagctagctgtgcattatttgaaggggt 330 Query: 275 caatgttacttgggcagaaactggaagtgaacttctctaagtacccgagtattacccctg 334 | || || ||||| ||||||||||||| |||| ||| ||||| || | || || |||| Sbjct: 331 ctatactatttgggaagaaactggaagttaactactcaaagtatcctaacatcacacctg 390 Query: 335 ctcctgatgcacatgactactcaacctccaaccttaaccggttcaacagtaatgtggcga 394 ||||||| || || ||||||| || ||| | | | |||||||||||||| || |||| | Sbjct: 391 ctcctgacgcccacgactacttaaactcaagcataaaccggttcaacagcaacgtggtca 450 Query: 395 agaactaccgccattgctgtgctccgaccaagatcatccacat 437 |||||||||| |||||||| |||| || ||||| |||||||| Sbjct: 451 agaactaccgacattgctgctctccaacgaagatgatccacat 493 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Plus Query: 532 ggcaagacgcaggctctcgtgcagttcgagagcgaggaagaggcgaccgaagctctggtc 591 ||||||| |||||||||| | |||||||||||| || ||||| ||||| || || || Sbjct: 589 ggcaagaggcaggctctcattttgttcgagagcgaagaggaggctaccgaggccctcgtg 648 Query: 592 tgtaagcatgcgagcaagctcgaggg 617 | |||||||| |||| ||||||||| Sbjct: 649 tcaaagcatgccagcacgctcgaggg 674
>gb|BT019146.1| Zea mays clone Contig801.F mRNA sequence Length = 1086 Score = 186 bits (94), Expect = 6e-44 Identities = 328/406 (80%) Strand = Plus / Plus Query: 35 tgattgctgctgcatttggtggaacattgcctcctggagtgactggtaccaatgatcgct 94 |||||||||| |||||||||||||| || |||| ||||||||||||||||||||| || | Sbjct: 141 tgattgctgccgcatttggtggaactttacctcatggagtgactggtaccaatgaacggt 200 Query: 95 gcacacttatagttagcaatttgaacagtgataaaatcgatgcggataagctgttcaatc 154 ||||||| ||||| || ||| |||| | ||||||||| |||| ||||||||| ||||||| Sbjct: 201 gcacactcatagtcagtaatctgaataatgataaaattgatgaggataagctcttcaatc 260 Query: 155 tattttctatttatggaaatatagtgagaatcaaggtactccgcaataaaccagaccatg 214 | ||||| | || ||||| ||||| | ||||||||||| || ||||||||||| |||| Sbjct: 261 tgttttccttgtacggaaacatagttcgtatcaaggtactgcgtaataaaccagatcatg 320 Query: 215 ccctcgtccagatggctgatgggcttcagaccgagcttgctatacactatttaaagggag 274 |||| || |||||||||| ||| | ||| | ||||| ||| | || ||||| ||||| | Sbjct: 321 cccttgttgagatggctgacgggttgcaggctgagctagctgtgcattatttgaaggggg 380 Query: 275 caatgttacttgggcagaaactggaagtgaacttctctaagtacccgagtattacccctg 334 | || || ||||| |||| |||||||| |||| ||| |||||||| | ||||| |||| Sbjct: 381 ctatactatttgggaagaagctggaagttaactactcaaagtaccctaacattacacctg 440 Query: 335 ctcctgatgcacatgactactcaacctccaaccttaaccggttcaacagtaatgtggcga 394 | || || || || ||||||| | ||| | ||| ||||| |||||||| || ||| | Sbjct: 441 ccccagacgcccacgactacttgaactcgagcctaaaccgattcaacagcaacatggtaa 500 Query: 395 agaactaccgccattgctgtgctccgaccaagatcatccacatctc 440 | |||||||| |||||||| |||| || ||||| ||||||||||| Sbjct: 501 aaaactaccgacattgctgctctccaacaaagatgatccacatctc 546
>gb|BT018463.1| Zea mays clone EL01N0417C03.d mRNA sequence Length = 1476 Score = 117 bits (59), Expect = 4e-23 Identities = 318/403 (78%), Gaps = 1/403 (0%) Strand = Plus / Plus Query: 35 tgattgctgctgcatttggtggaacattgcctcctggagtgactggtaccaatgatcgct 94 ||||||| ||||||||||||||||| || |||| ||||||||||||||||||||| || | Sbjct: 603 tgattgcggctgcatttggtggaactttacctcatggagtgactggtaccaatgaacggt 662 Query: 95 gcacacttatagttagcaatttgaacagtgataaaatcgatgcggataagctgttcaatc 154 ||||||| || || || ||| |||| | |||| | | |||| ||||||||| ||||||| Sbjct: 663 gcacactcatcgtcagtaatctgaatactgat-catttgatgaggataagcttttcaatc 721 Query: 155 tattttctatttatggaaatatagtgagaatcaaggtactccgcaataaaccagaccatg 214 | ||||| | | || ||||| |||||||| |||| || || |||||||| |||| Sbjct: 722 tgttttccttgtcccttaacatagtacgaatcaagatactgcgtaacaaaccagatcatg 781 Query: 215 ccctcgtccagatggctgatgggcttcagaccgagcttgctatacactatttaaagggag 274 | || || |||||||||||||| | ||| | ||||| ||| | || ||||| ||||| Sbjct: 782 cacttgttgagatggctgatgggttgcaggcagagctagctgtgcattatttgaaggggt 841 Query: 275 caatgttacttgggcagaaactggaagtgaacttctctaagtacccgagtattacccctg 334 | || || |||| ||||||||||||| |||| ||| ||||| || | || || |||| Sbjct: 842 ctatactatttggtaagaaactggaagttaactactcaaagtatcctaacatcacacctg 901 Query: 335 ctcctgatgcacatgactactcaacctccaaccttaaccggttcaacagtaatgtggcga 394 ||||||| || || ||||||| || ||| | | | |||||||||||||| || |||| | Sbjct: 902 ctcctgacgcccacgactacttaaactcaagcataaaccggttcaacagcaacgtggtca 961 Query: 395 agaactaccgccattgctgtgctccgaccaagatcatccacat 437 |||||||||| |||||||| |||| || ||||| |||||||| Sbjct: 962 agaactaccgacattgctgctctccaacgaagatgatccacat 1004 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Plus Query: 532 ggcaagacgcaggctctcgtgcagttcgagagcgaggaagaggcgaccgaagctctggtc 591 ||||||| |||||||||| | |||||||||||| || ||||| ||||| || || || Sbjct: 1099 ggcaagaggcaggctctcattttgttcgagagcgaagaggaggctaccgaggccctcgtg 1158 Query: 592 tgtaagcatgcgagcaagctcgaggg 617 | |||||||| |||| ||||||||| Sbjct: 1159 tcaaagcatgccagcacgctcgaggg 1184
>ref|XM_475305.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1170 Score = 113 bits (57), Expect = 7e-22 Identities = 315/401 (78%) Strand = Plus / Plus Query: 43 gctgcatttggtggaacattgcctcctggagtgactggtaccaatgatcgctgcacactt 102 |||||||| |||||||| || ||||| || |||||||||||||| || || ||||| || Sbjct: 553 gctgcattcggtggaactttacctcccggggtgactggtaccaacgaacgttgcacgcta 612 Query: 103 atagttagcaatttgaacagtgataaaatcgatgcggataagctgttcaatctattttct 162 ||||| || |||||||||| ||||||||| ||| |||||||| |||||||| || ||| Sbjct: 613 atagtcagtaatttgaacactgataaaataaatgaagataagcttttcaatctgttctct 672 Query: 163 atttatggaaatatagtgagaatcaaggtactccgcaataaaccagaccatgccctcgtc 222 | ||||| || ||||| ||||||| |||| ||||| |||||||| || ||||| || Sbjct: 673 ctatatgggaacatagtccgaatcaaaatactgcgcaacaaaccagatcacgcccttgtt 732 Query: 223 cagatggctgatgggcttcagaccgagcttgctatacactatttaaagggagcaatgtta 282 | |||||||||||| ||||| | ||||| ||| | || ||| | ||||| ||| || || Sbjct: 733 gaaatggctgatgggtttcaggctgagctagctgtgcattatctgaagggggcagtgcta 792 Query: 283 cttgggcagaaactggaagtgaacttctctaagtacccgagtattacccctgctcctgat 342 ||| |||| || || || |||| ||| |||||||| | ||| || ||||||||| Sbjct: 793 tttgcaaagaagctcgaggttaactactcaaagtacccaaatataacaagcgctcctgat 852 Query: 343 gcacatgactactcaacctccaaccttaaccggttcaacagtaatgtggcgaagaactac 402 || || |||||| | || || | |||||| |||||||||| ||||| ||||||||| Sbjct: 853 gcgcacgactacacgacttcaagtcttaacaggttcaacagcaatgtaatcaagaactac 912 Query: 403 cgccattgctgtgctccgaccaagatcatccacatctcagc 443 || || ||||| ||||| ||||| || |||||||| ||||| Sbjct: 913 cgtcactgctgcgctccaaccaaaatgatccacatttcagc 953 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 512 caaagctgtttgaggcgagcggcaagacgcaggctctcgtgcagttcgagagcgaggaag 571 ||||||||||||||| || |||||||| |||||| ||| | |||||||||||||| || | Sbjct: 1022 caaagctgtttgaggtgaacggcaagaggcaggcgctcatccagttcgagagcgaagagg 1081 Query: 572 aggcgaccgaagc 584 ||||||||||||| Sbjct: 1082 aggcgaccgaagc 1094
>dbj|AK102760.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107C19, full insert sequence Length = 1934 Score = 113 bits (57), Expect = 7e-22 Identities = 315/401 (78%) Strand = Plus / Plus Query: 43 gctgcatttggtggaacattgcctcctggagtgactggtaccaatgatcgctgcacactt 102 |||||||| |||||||| || ||||| || |||||||||||||| || || ||||| || Sbjct: 993 gctgcattcggtggaactttacctcccggggtgactggtaccaacgaacgttgcacgcta 1052 Query: 103 atagttagcaatttgaacagtgataaaatcgatgcggataagctgttcaatctattttct 162 ||||| || |||||||||| ||||||||| ||| |||||||| |||||||| || ||| Sbjct: 1053 atagtcagtaatttgaacactgataaaataaatgaagataagcttttcaatctgttctct 1112 Query: 163 atttatggaaatatagtgagaatcaaggtactccgcaataaaccagaccatgccctcgtc 222 | ||||| || ||||| ||||||| |||| ||||| |||||||| || ||||| || Sbjct: 1113 ctatatgggaacatagtccgaatcaaaatactgcgcaacaaaccagatcacgcccttgtt 1172 Query: 223 cagatggctgatgggcttcagaccgagcttgctatacactatttaaagggagcaatgtta 282 | |||||||||||| ||||| | ||||| ||| | || ||| | ||||| ||| || || Sbjct: 1173 gaaatggctgatgggtttcaggctgagctagctgtgcattatctgaagggggcagtgcta 1232 Query: 283 cttgggcagaaactggaagtgaacttctctaagtacccgagtattacccctgctcctgat 342 ||| |||| || || || |||| ||| |||||||| | ||| || ||||||||| Sbjct: 1233 tttgcaaagaagctcgaggttaactactcaaagtacccaaatataacaagcgctcctgat 1292 Query: 343 gcacatgactactcaacctccaaccttaaccggttcaacagtaatgtggcgaagaactac 402 || || |||||| | || || | |||||| |||||||||| ||||| ||||||||| Sbjct: 1293 gcgcacgactacacgacttcaagtcttaacaggttcaacagcaatgtaatcaagaactac 1352 Query: 403 cgccattgctgtgctccgaccaagatcatccacatctcagc 443 || || ||||| ||||| ||||| || |||||||| ||||| Sbjct: 1353 cgtcactgctgcgctccaaccaaaatgatccacatttcagc 1393 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 512 caaagctgtttgaggcgagcggcaagacgcaggctctcgtgcagttcgagagcgaggaag 571 ||||||||||||||| || |||||||| |||||| ||| | |||||||||||||| || | Sbjct: 1462 caaagctgtttgaggtgaacggcaagaggcaggcgctcatccagttcgagagcgaagagg 1521 Query: 572 aggcgaccgaagc 584 ||||||||||||| Sbjct: 1522 aggcgaccgaagc 1534
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 103 bits (52), Expect = 7e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 35 tgattgctgctgcatttggtggaacattgcctcctggagtgactggtaccaatgatcgct 94 |||| |||||||| ||||||||||||||||||||||||||| |||| | |||||| || | Sbjct: 37576958 tgatcgctgctgcttttggtggaacattgcctcctggagtgtctggcatcaatgaccgtt 37577017 Query: 95 gcacacttatagttagcaatttgaacagtgat 126 |||||||| ||||||||||| |||||| |||| Sbjct: 37577018 gcacacttctagttagcaatctgaacactgat 37577049 Score = 97.6 bits (49), Expect = 4e-17 Identities = 121/145 (83%) Strand = Plus / Plus Query: 127 aaaatcgatgcggataagctgttcaatctattttctatttatggaaatatagtgagaatc 186 ||||| |||| ||||||||| ||||| || || || || ||||| ||||| ||| | ||| Sbjct: 37577129 aaaattgatgaggataagctcttcaaccttttctcaatgtatgggaatatcgtgcgtatc 37577188 Query: 187 aaggtactccgcaataaaccagaccatgccctcgtccagatggctgatgggcttcagacc 246 ||| ||||| ||||||||||| ||||||||| ||||||||||||| ||||||||| | Sbjct: 37577189 aagatactcaaaaataaaccagatcatgccctcatccagatggctgacgggcttcaggct 37577248 Query: 247 gagcttgctatacactatttaaagg 271 ||||||||| ||| |||||||||| Sbjct: 37577249 gagcttgctgtactgtatttaaagg 37577273 Score = 93.7 bits (47), Expect = 7e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 269 agggagcaatgttacttgggcagaaactggaagtgaacttctctaagtacccgagtatta 328 ||||||||||| || | || |||| || |||||||||| ||| |||||||| | ||| Sbjct: 37577419 agggagcaatgctattcggaaagaagcttgaagtgaactactccaagtacccaaccgtta 37577478 Query: 329 cccctgctcctgatgcacatgactactcaacctccaaccttaaccggttcaacagtaatg 388 | ||| ||| ||||||| |||||||||||| || |||| ||| | || ||||| |||| Sbjct: 37577479 ctgctgatccagatgcacgtgactactcaacttctcacctcaacagatttaacagcaatg 37577538 Query: 389 tggcgaagaactaccgccattgctgtgctccgaccaagatcatccacatctcagcgctt 447 ||| ||||||||||||||| || || || || |||||||| |||||||||||||||||| Sbjct: 37577539 tggtgaagaactaccgccactgttgcgccccaaccaagatgatccacatctcagcgctt 37577597 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 487 ggtgagcatggcaccatcgtcaagtcaaagctgtttgaggcgagcggcaagacgcaggct 546 ||||||||||| || |||| ||| |||| ||||| ||| ||| |||||| |||||||| Sbjct: 37577637 ggtgagcatgggactatcgccaactcaagactgttcgagacgaacggcaaaacgcaggcc 37577696 Query: 547 ctcgtgcagttcgagagcgaggaagaggc 575 || |||| ||| || |||| ||||||||| Sbjct: 37577697 cttgtgctgtttgaaagcgtggaagaggc 37577725
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 103 bits (52), Expect = 7e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 35 tgattgctgctgcatttggtggaacattgcctcctggagtgactggtaccaatgatcgct 94 |||| |||||||| ||||||||||||||||||||||||||| |||| | |||||| || | Sbjct: 37432 tgatcgctgctgcttttggtggaacattgcctcctggagtgtctggcatcaatgaccgtt 37491 Query: 95 gcacacttatagttagcaatttgaacagtgat 126 |||||||| ||||||||||| |||||| |||| Sbjct: 37492 gcacacttctagttagcaatctgaacactgat 37523 Score = 97.6 bits (49), Expect = 4e-17 Identities = 121/145 (83%) Strand = Plus / Plus Query: 127 aaaatcgatgcggataagctgttcaatctattttctatttatggaaatatagtgagaatc 186 ||||| |||| ||||||||| ||||| || || || || ||||| ||||| ||| | ||| Sbjct: 37603 aaaattgatgaggataagctcttcaaccttttctcaatgtatgggaatatcgtgcgtatc 37662 Query: 187 aaggtactccgcaataaaccagaccatgccctcgtccagatggctgatgggcttcagacc 246 ||| ||||| ||||||||||| ||||||||| ||||||||||||| ||||||||| | Sbjct: 37663 aagatactcaaaaataaaccagatcatgccctcatccagatggctgacgggcttcaggct 37722 Query: 247 gagcttgctatacactatttaaagg 271 ||||||||| ||| |||||||||| Sbjct: 37723 gagcttgctgtactgtatttaaagg 37747 Score = 93.7 bits (47), Expect = 7e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 269 agggagcaatgttacttgggcagaaactggaagtgaacttctctaagtacccgagtatta 328 ||||||||||| || | || |||| || |||||||||| ||| |||||||| | ||| Sbjct: 37893 agggagcaatgctattcggaaagaagcttgaagtgaactactccaagtacccaaccgtta 37952 Query: 329 cccctgctcctgatgcacatgactactcaacctccaaccttaaccggttcaacagtaatg 388 | ||| ||| ||||||| |||||||||||| || |||| ||| | || ||||| |||| Sbjct: 37953 ctgctgatccagatgcacgtgactactcaacttctcacctcaacagatttaacagcaatg 38012 Query: 389 tggcgaagaactaccgccattgctgtgctccgaccaagatcatccacatctcagcgctt 447 ||| ||||||||||||||| || || || || |||||||| |||||||||||||||||| Sbjct: 38013 tggtgaagaactaccgccactgttgcgccccaaccaagatgatccacatctcagcgctt 38071 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 487 ggtgagcatggcaccatcgtcaagtcaaagctgtttgaggcgagcggcaagacgcaggct 546 ||||||||||| || |||| ||| |||| ||||| ||| ||| |||||| |||||||| Sbjct: 38111 ggtgagcatgggactatcgccaactcaagactgttcgagacgaacggcaaaacgcaggcc 38170 Query: 547 ctcgtgcagttcgagagcgaggaagaggc 575 || |||| ||| || |||| ||||||||| Sbjct: 38171 cttgtgctgtttgaaagcgtggaagaggc 38199
>gb|AC105318.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_F05, complete sequence Length = 109126 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 512 caaagctgtttgaggcgagcggcaagacgcaggctctcgtgcagttcgagagcgaggaag 571 ||||||||||||||| || |||||||| |||||| ||| | |||||||||||||| || | Sbjct: 57860 caaagctgtttgaggtgaacggcaagaggcaggcgctcatccagttcgagagcgaagagg 57801 Query: 572 aggcgaccgaagc 584 ||||||||||||| Sbjct: 57800 aggcgaccgaagc 57788 Score = 63.9 bits (32), Expect = 6e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 43 gctgcatttggtggaacattgcctcctggagtgactggtaccaatgatcgctgcacactt 102 |||||||| |||||||| || ||||| || |||||||||||||| || || ||||| || Sbjct: 59328 gctgcattcggtggaactttacctcccggggtgactggtaccaacgaacgttgcacgcta 59269 Query: 103 atagttagcaatttgaacagtgat 126 ||||| || |||||||||| |||| Sbjct: 59268 atagtcagtaatttgaacactgat 59245 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Minus Query: 334 gctcctgatgcacatgactactcaacctccaaccttaaccggttcaacagtaatgtggcg 393 ||||||||||| || |||||| | || || | |||||| |||||||||| ||||| Sbjct: 58038 gctcctgatgcgcacgactacacgacttcaagtcttaacaggttcaacagcaatgtaatc 57979 Query: 394 aagaactaccgccattgctgtgctccgaccaagatcatccacatctcagc 443 ||||||||||| || ||||| ||||| ||||| || |||||||| ||||| Sbjct: 57978 aagaactaccgtcactgctgcgctccaaccaaaatgatccacatttcagc 57929 Score = 50.1 bits (25), Expect = 0.009 Identities = 85/105 (80%) Strand = Plus / Minus Query: 139 gataagctgttcaatctattttctatttatggaaatatagtgagaatcaaggtactccgc 198 |||||||| |||||||| || ||| | ||||| || ||||| ||||||| |||| ||| Sbjct: 58345 gataagcttttcaatctgttctctctatatgggaacatagtccgaatcaaaatactgcgc 58286 Query: 199 aataaaccagaccatgccctcgtccagatggctgatgggcttcag 243 || |||||||| || ||||| || | |||||||||||| ||||| Sbjct: 58285 aacaaaccagatcacgcccttgttgaaatggctgatgggtttcag 58241
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 512 caaagctgtttgaggcgagcggcaagacgcaggctctcgtgcagttcgagagcgaggaag 571 ||||||||||||||| || |||||||| |||||| ||| | |||||||||||||| || | Sbjct: 21271254 caaagctgtttgaggtgaacggcaagaggcaggcgctcatccagttcgagagcgaagagg 21271195 Query: 572 aggcgaccgaagc 584 ||||||||||||| Sbjct: 21271194 aggcgaccgaagc 21271182 Score = 63.9 bits (32), Expect = 6e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 43 gctgcatttggtggaacattgcctcctggagtgactggtaccaatgatcgctgcacactt 102 |||||||| |||||||| || ||||| || |||||||||||||| || || ||||| || Sbjct: 21272722 gctgcattcggtggaactttacctcccggggtgactggtaccaacgaacgttgcacgcta 21272663 Query: 103 atagttagcaatttgaacagtgat 126 ||||| || |||||||||| |||| Sbjct: 21272662 atagtcagtaatttgaacactgat 21272639 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Minus Query: 334 gctcctgatgcacatgactactcaacctccaaccttaaccggttcaacagtaatgtggcg 393 ||||||||||| || |||||| | || || | |||||| |||||||||| ||||| Sbjct: 21271432 gctcctgatgcgcacgactacacgacttcaagtcttaacaggttcaacagcaatgtaatc 21271373 Query: 394 aagaactaccgccattgctgtgctccgaccaagatcatccacatctcagc 443 ||||||||||| || ||||| ||||| ||||| || |||||||| ||||| Sbjct: 21271372 aagaactaccgtcactgctgcgctccaaccaaaatgatccacatttcagc 21271323 Score = 50.1 bits (25), Expect = 0.009 Identities = 85/105 (80%) Strand = Plus / Minus Query: 139 gataagctgttcaatctattttctatttatggaaatatagtgagaatcaaggtactccgc 198 |||||||| |||||||| || ||| | ||||| || ||||| ||||||| |||| ||| Sbjct: 21271739 gataagcttttcaatctgttctctctatatgggaacatagtccgaatcaaaatactgcgc 21271680 Query: 199 aataaaccagaccatgccctcgtccagatggctgatgggcttcag 243 || |||||||| || ||||| || | |||||||||||| ||||| Sbjct: 21271679 aacaaaccagatcacgcccttgttgaaatggctgatgggtttcag 21271635
>gb|DQ428495.1| Sorghum propinquum locus PRC1123 genomic sequence Length = 715 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 127 aaaatcgatgcggataagctgttcaatctattttctatttatggaaatatagtgagaatc 186 ||||| |||| ||||||||| |||||||| ||||| | |||||||| ||||| ||||| Sbjct: 200 aaaattgatgaggataagcttttcaatctgttttccttgtatggaaacatagtaagaatt 259 Query: 187 aaggtactccgcaataaaccagaccatgccctcgtccagatggctgatggg 237 ||| |||| || || |||||||| |||||||| || |||||||||||||| Sbjct: 260 aagatactgcggaacaaaccagatcatgcccttgttgagatggctgatggg 310 Score = 67.9 bits (34), Expect = 4e-08 Identities = 106/130 (81%) Strand = Plus / Plus Query: 284 ttgggcagaaactggaagtgaacttctctaagtacccgagtattacccctgctcctgatg 343 ||||| ||||||||||||| |||| ||| |||||||| | || || ||||| || || | Sbjct: 437 ttgggaagaaactggaagttaactactcaaagtaccctaacatcacacctgccccagacg 496 Query: 344 cacatgactactcaacctccaaccttaaccggttcaacagtaatgtggcgaagaactacc 403 | || ||||||| || ||| | ||| |||||||||||||| || |||| |||||||||| Sbjct: 497 cccacgactacttaaactcaagcctgaaccggttcaacagcaacgtggtcaagaactacc 556 Query: 404 gccattgctg 413 | |||||||| Sbjct: 557 gtcattgctg 566
>gb|DQ428494.1| Sorghum bicolor voucher PI585454 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 127 aaaatcgatgcggataagctgttcaatctattttctatttatggaaatatagtgagaatc 186 ||||| |||| ||||||||| |||||||| ||||| | |||||||| ||||| ||||| Sbjct: 198 aaaattgatgaggataagcttttcaatctgttttccttgtatggaaacatagtaagaatt 257 Query: 187 aaggtactccgcaataaaccagaccatgccctcgtccagatggctgatggg 237 ||| |||| || || |||||||| |||||||| || |||||||||||||| Sbjct: 258 aagatactgcggaacaaaccagatcatgcccttgttgagatggctgatggg 308 Score = 52.0 bits (26), Expect = 0.002 Identities = 104/130 (80%) Strand = Plus / Plus Query: 284 ttgggcagaaactggaagtgaacttctctaagtacccgagtattacccctgctcctgatg 343 ||||| ||||||||||||| |||| ||| |||||||| | || || ||||| || || | Sbjct: 435 ttgggaagaaactggaagttaactactcaaagtaccctaacatcacacctgccccagacg 494 Query: 344 cacatgactactcaacctccaaccttaaccggttcaacagtaatgtggcgaagaactacc 403 | || || |||| | ||| | ||| |||||||||||||| || |||| |||||||||| Sbjct: 495 cccacgattacttgaactcaagcctgaaccggttcaacagcaacgtggtcaagaactacc 554 Query: 404 gccattgctg 413 | |||||||| Sbjct: 555 gtcattgctg 564
>gb|DQ428493.1| Sorghum bicolor voucher PI267539b locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 127 aaaatcgatgcggataagctgttcaatctattttctatttatggaaatatagtgagaatc 186 ||||| |||| ||||||||| |||||||| ||||| | |||||||| ||||| ||||| Sbjct: 198 aaaattgatgaggataagcttttcaatctgttttccttgtatggaaacatagtaagaatt 257 Query: 187 aaggtactccgcaataaaccagaccatgccctcgtccagatggctgatggg 237 ||| |||| || || |||||||| |||||||| || |||||||||||||| Sbjct: 258 aagatactgcggaacaaaccagatcatgcccttgttgagatggctgatggg 308 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 370 aaccggttcaacagtaatgtggcgaagaactaccgccattgctg 413 |||||||||||||| || |||| ||||||||||| |||||||| Sbjct: 521 aaccggttcaacagcaacgtggtcaagaactaccgtcattgctg 564
>gb|DQ428492.1| Sorghum bicolor voucher PI267539a locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 127 aaaatcgatgcggataagctgttcaatctattttctatttatggaaatatagtgagaatc 186 ||||| |||| ||||||||| |||||||| ||||| | |||||||| ||||| ||||| Sbjct: 198 aaaattgatgaggataagcttttcaatctgttttccttgtatggaaacatagtaagaatt 257 Query: 187 aaggtactccgcaataaaccagaccatgccctcgtccagatggctgatggg 237 ||| |||| || || |||||||| |||||||| || |||||||||||||| Sbjct: 258 aagatactgcggaacaaaccagatcatgcccttgttgagatggctgatggg 308 Score = 52.0 bits (26), Expect = 0.002 Identities = 104/130 (80%) Strand = Plus / Plus Query: 284 ttgggcagaaactggaagtgaacttctctaagtacccgagtattacccctgctcctgatg 343 ||||| ||||||||||||| |||| ||| |||||||| | || || ||||| || || | Sbjct: 435 ttgggaagaaactggaagttaactactcaaagtaccctaacatcacacctgccccagacg 494 Query: 344 cacatgactactcaacctccaaccttaaccggttcaacagtaatgtggcgaagaactacc 403 | || || |||| | ||| | ||| |||||||||||||| || |||| |||||||||| Sbjct: 495 cccacgattacttgaactcaagcctgaaccggttcaacagcaacgtggtcaagaactacc 554 Query: 404 gccattgctg 413 | |||||||| Sbjct: 555 gtcattgctg 564
>gb|DQ428491.1| Sorghum bicolor voucher PI267408 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 127 aaaatcgatgcggataagctgttcaatctattttctatttatggaaatatagtgagaatc 186 ||||| |||| ||||||||| |||||||| ||||| | |||||||| ||||| ||||| Sbjct: 198 aaaattgatgaggataagcttttcaatctgttttccttgtatggaaacatagtaagaatt 257 Query: 187 aaggtactccgcaataaaccagaccatgccctcgtccagatggctgatggg 237 ||| |||| || || |||||||| |||||||| || |||||||||||||| Sbjct: 258 aagatactgcggaacaaaccagatcatgcccttgttgagatggctgatggg 308 Score = 52.0 bits (26), Expect = 0.002 Identities = 104/130 (80%) Strand = Plus / Plus Query: 284 ttgggcagaaactggaagtgaacttctctaagtacccgagtattacccctgctcctgatg 343 ||||| ||||||||||||| |||| ||| |||||||| | || || ||||| || || | Sbjct: 435 ttgggaagaaactggaagttaactactcaaagtaccctaacatcacacctgccccagacg 494 Query: 344 cacatgactactcaacctccaaccttaaccggttcaacagtaatgtggcgaagaactacc 403 | || || |||| | ||| | ||| |||||||||||||| || |||| |||||||||| Sbjct: 495 cccacgattacttgaactcaagcctgaaccggttcaacagcaacgtggtcaagaactacc 554 Query: 404 gccattgctg 413 | |||||||| Sbjct: 555 gtcattgctg 564
>gb|DQ428490.1| Sorghum bicolor voucher PI221607 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 127 aaaatcgatgcggataagctgttcaatctattttctatttatggaaatatagtgagaatc 186 ||||| |||| ||||||||| |||||||| ||||| | |||||||| ||||| ||||| Sbjct: 198 aaaattgatgaggataagcttttcaatctgttttccttgtatggaaacatagtaagaatt 257 Query: 187 aaggtactccgcaataaaccagaccatgccctcgtccagatggctgatggg 237 ||| |||| || || |||||||| |||||||| || |||||||||||||| Sbjct: 258 aagatactgcggaacaaaccagatcatgcccttgttgagatggctgatggg 308 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 370 aaccggttcaacagtaatgtggcgaagaactaccgccattgctg 413 |||||||||||||| || |||| ||||||||||| |||||||| Sbjct: 521 aaccggttcaacagcaacgtggtcaagaactaccgtcattgctg 564
>gb|DQ428489.1| Sorghum bicolor voucher PI152702 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 127 aaaatcgatgcggataagctgttcaatctattttctatttatggaaatatagtgagaatc 186 ||||| |||| ||||||||| |||||||| ||||| | |||||||| ||||| ||||| Sbjct: 198 aaaattgatgaggataagcttttcaatctgttttccttgtatggaaacatagtaagaatt 257 Query: 187 aaggtactccgcaataaaccagaccatgccctcgtccagatggctgatggg 237 ||| |||| || || |||||||| |||||||| || |||||||||||||| Sbjct: 258 aagatactgcggaacaaaccagatcatgcccttgttgagatggctgatggg 308 Score = 52.0 bits (26), Expect = 0.002 Identities = 104/130 (80%) Strand = Plus / Plus Query: 284 ttgggcagaaactggaagtgaacttctctaagtacccgagtattacccctgctcctgatg 343 ||||| ||||||||||||| |||| ||| |||||||| | || || ||||| || || | Sbjct: 435 ttgggaagaaactggaagttaactactcaaagtaccctaacatcacacctgccccagacg 494 Query: 344 cacatgactactcaacctccaaccttaaccggttcaacagtaatgtggcgaagaactacc 403 | || || |||| | ||| | ||| |||||||||||||| || |||| |||||||||| Sbjct: 495 cccacgattacttgaactcaagcctgaaccggttcaacagcaacgtggtcaagaactacc 554 Query: 404 gccattgctg 413 | |||||||| Sbjct: 555 gtcattgctg 564
>gb|DQ428488.1| Sorghum bicolor voucher NSL92371 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 127 aaaatcgatgcggataagctgttcaatctattttctatttatggaaatatagtgagaatc 186 ||||| |||| ||||||||| |||||||| ||||| | |||||||| ||||| ||||| Sbjct: 198 aaaattgatgaggataagcttttcaatctgttttccttgtatggaaacatagtaagaatt 257 Query: 187 aaggtactccgcaataaaccagaccatgccctcgtccagatggctgatggg 237 ||| |||| || || |||||||| |||||||| || |||||||||||||| Sbjct: 258 aagatactgcggaacaaaccagatcatgcccttgttgagatggctgatggg 308 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 370 aaccggttcaacagtaatgtggcgaagaactaccgccattgctg 413 |||||||||||||| || |||| ||||||||||| |||||||| Sbjct: 521 aaccggttcaacagcaacgtggtcaagaactaccgtcattgctg 564
>gb|DQ428487.1| Sorghum bicolor voucher NSL87902 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 127 aaaatcgatgcggataagctgttcaatctattttctatttatggaaatatagtgagaatc 186 ||||| |||| ||||||||| |||||||| ||||| | |||||||| ||||| ||||| Sbjct: 198 aaaattgatgaggataagcttttcaatctgttttccttgtatggaaacatagtaagaatt 257 Query: 187 aaggtactccgcaataaaccagaccatgccctcgtccagatggctgatggg 237 ||| |||| || || |||||||| |||||||| || |||||||||||||| Sbjct: 258 aagatactgcggaacaaaccagatcatgcccttgttgagatggctgatggg 308 Score = 52.0 bits (26), Expect = 0.002 Identities = 104/130 (80%) Strand = Plus / Plus Query: 284 ttgggcagaaactggaagtgaacttctctaagtacccgagtattacccctgctcctgatg 343 ||||| ||||||||||||| |||| ||| |||||||| | || || ||||| || || | Sbjct: 435 ttgggaagaaactggaagttaactactcaaagtaccctaacatcacacctgccccagacg 494 Query: 344 cacatgactactcaacctccaaccttaaccggttcaacagtaatgtggcgaagaactacc 403 | || || |||| | ||| | ||| |||||||||||||| || |||| |||||||||| Sbjct: 495 cccacgattacttgaactcaagcctgaaccggttcaacagcaacgtggtcaagaactacc 554 Query: 404 gccattgctg 413 | |||||||| Sbjct: 555 gtcattgctg 564
>gb|DQ428486.1| Sorghum bicolor voucher NSL87666 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 127 aaaatcgatgcggataagctgttcaatctattttctatttatggaaatatagtgagaatc 186 ||||| |||| ||||||||| |||||||| ||||| | |||||||| ||||| ||||| Sbjct: 198 aaaattgatgaggataagcttttcaatctgttttccttgtatggaaacatagtaagaatt 257 Query: 187 aaggtactccgcaataaaccagaccatgccctcgtccagatggctgatggg 237 ||| |||| || || |||||||| |||||||| || |||||||||||||| Sbjct: 258 aagatactgcggaacaaaccagatcatgcccttgttgagatggctgatggg 308 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 370 aaccggttcaacagtaatgtggcgaagaactaccgccattgctg 413 |||||||||||||| || |||| ||||||||||| |||||||| Sbjct: 521 aaccggttcaacagcaacgtggtcaagaactaccgtcattgctg 564
>gb|DQ428485.1| Sorghum bicolor voucher NSL77217 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 127 aaaatcgatgcggataagctgttcaatctattttctatttatggaaatatagtgagaatc 186 ||||| |||| ||||||||| |||||||| ||||| | |||||||| ||||| ||||| Sbjct: 198 aaaattgatgaggataagcttttcaatctgttttccttgtatggaaacatagtaagaatt 257 Query: 187 aaggtactccgcaataaaccagaccatgccctcgtccagatggctgatggg 237 ||| |||| || || |||||||| |||||||| || |||||||||||||| Sbjct: 258 aagatactgcggaacaaaccagatcatgcccttgttgagatggctgatggg 308 Score = 52.0 bits (26), Expect = 0.002 Identities = 104/130 (80%) Strand = Plus / Plus Query: 284 ttgggcagaaactggaagtgaacttctctaagtacccgagtattacccctgctcctgatg 343 ||||| ||||||||||||| |||| ||| |||||||| | || || ||||| || || | Sbjct: 435 ttgggaagaaactggaagttaactactcaaagtaccctaacatcacacctgccccagacg 494 Query: 344 cacatgactactcaacctccaaccttaaccggttcaacagtaatgtggcgaagaactacc 403 | || || |||| | ||| | ||| |||||||||||||| || |||| |||||||||| Sbjct: 495 cccacgattacttgaactcaagcctgaaccggttcaacagcaacgtggtcaagaactacc 554 Query: 404 gccattgctg 413 | |||||||| Sbjct: 555 gtcattgctg 564
>gb|DQ428484.1| Sorghum bicolor voucher NSL77034 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 127 aaaatcgatgcggataagctgttcaatctattttctatttatggaaatatagtgagaatc 186 ||||| |||| ||||||||| |||||||| ||||| | |||||||| ||||| ||||| Sbjct: 198 aaaattgatgaggataagcttttcaatctgttttccttgtatggaaacatagtaagaatt 257 Query: 187 aaggtactccgcaataaaccagaccatgccctcgtccagatggctgatggg 237 ||| |||| || || |||||||| |||||||| || |||||||||||||| Sbjct: 258 aagatactgcggaacaaaccagatcatgcccttgttgagatggctgatggg 308 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 370 aaccggttcaacagtaatgtggcgaagaactaccgccattgctg 413 |||||||||||||| || |||| ||||||||||| |||||||| Sbjct: 521 aaccggttcaacagcaacgtggtcaagaactaccgtcattgctg 564
>gb|DQ428483.1| Sorghum bicolor voucher NSL56174 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 127 aaaatcgatgcggataagctgttcaatctattttctatttatggaaatatagtgagaatc 186 ||||| |||| ||||||||| |||||||| ||||| | |||||||| ||||| ||||| Sbjct: 198 aaaattgatgaggataagcttttcaatctgttttccttgtatggaaacatagtaagaatt 257 Query: 187 aaggtactccgcaataaaccagaccatgccctcgtccagatggctgatggg 237 ||| |||| || || |||||||| |||||||| || |||||||||||||| Sbjct: 258 aagatactgcggaacaaaccagatcatgcccttgttgagatggctgatggg 308 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 370 aaccggttcaacagtaatgtggcgaagaactaccgccattgctg 413 |||||||||||||| || |||| ||||||||||| |||||||| Sbjct: 521 aaccggttcaacagcaacgtggtcaagaactaccgtcattgctg 564
>gb|DQ428482.1| Sorghum bicolor voucher NSL56003 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 127 aaaatcgatgcggataagctgttcaatctattttctatttatggaaatatagtgagaatc 186 ||||| |||| ||||||||| |||||||| ||||| | |||||||| ||||| ||||| Sbjct: 198 aaaattgatgaggataagcttttcaatctgttttccttgtatggaaacatagtaagaatt 257 Query: 187 aaggtactccgcaataaaccagaccatgccctcgtccagatggctgatggg 237 ||| |||| || || |||||||| |||||||| || |||||||||||||| Sbjct: 258 aagatactgcggaacaaaccagatcatgcccttgttgagatggctgatggg 308 Score = 52.0 bits (26), Expect = 0.002 Identities = 104/130 (80%) Strand = Plus / Plus Query: 284 ttgggcagaaactggaagtgaacttctctaagtacccgagtattacccctgctcctgatg 343 ||||| ||||||||||||| |||| ||| |||||||| | || || ||||| || || | Sbjct: 435 ttgggaagaaactggaagttaactactcaaagtaccctaacatcacacctgccccagacg 494 Query: 344 cacatgactactcaacctccaaccttaaccggttcaacagtaatgtggcgaagaactacc 403 | || || |||| | ||| | ||| |||||||||||||| || |||| |||||||||| Sbjct: 495 cccacgattacttgaactcaagcctgaaccggttcaacagcaacgtggttaagaactacc 554 Query: 404 gccattgctg 413 | |||||||| Sbjct: 555 gtcattgctg 564
>gb|DQ428481.1| Sorghum bicolor voucher NSL55243 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 127 aaaatcgatgcggataagctgttcaatctattttctatttatggaaatatagtgagaatc 186 ||||| |||| ||||||||| |||||||| ||||| | |||||||| ||||| ||||| Sbjct: 198 aaaattgatgaggataagcttttcaatctgttttccttgtatggaaacatagtaagaatt 257 Query: 187 aaggtactccgcaataaaccagaccatgccctcgtccagatggctgatggg 237 ||| |||| || || |||||||| |||||||| || |||||||||||||| Sbjct: 258 aagatactgcggaacaaaccagatcatgcccttgttgagatggctgatggg 308 Score = 52.0 bits (26), Expect = 0.002 Identities = 104/130 (80%) Strand = Plus / Plus Query: 284 ttgggcagaaactggaagtgaacttctctaagtacccgagtattacccctgctcctgatg 343 ||||| ||||||||||||| |||| ||| |||||||| | || || ||||| || || | Sbjct: 435 ttgggaagaaactggaagttaactactcaaagtaccctaacatcacacctgccccagacg 494 Query: 344 cacatgactactcaacctccaaccttaaccggttcaacagtaatgtggcgaagaactacc 403 | || || |||| | ||| | ||| |||||||||||||| || |||| |||||||||| Sbjct: 495 cccacgattacttgaactcaagcctgaaccggttcaacagcaacgtggtcaagaactacc 554 Query: 404 gccattgctg 413 | |||||||| Sbjct: 555 gtcattgctg 564
>gb|DQ428480.1| Sorghum bicolor voucher NSL51365 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 127 aaaatcgatgcggataagctgttcaatctattttctatttatggaaatatagtgagaatc 186 ||||| |||| ||||||||| |||||||| ||||| | |||||||| ||||| ||||| Sbjct: 198 aaaattgatgaggataagcttttcaatctgttttccttgtatggaaacatagtaagaatt 257 Query: 187 aaggtactccgcaataaaccagaccatgccctcgtccagatggctgatggg 237 ||| |||| || || |||||||| |||||||| || |||||||||||||| Sbjct: 258 aagatactgcggaacaaaccagatcatgcccttgttgagatggctgatggg 308 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 370 aaccggttcaacagtaatgtggcgaagaactaccgccattgctg 413 |||||||||||||| || |||| ||||||||||| |||||||| Sbjct: 521 aaccggttcaacagcaacgtggtcaagaactaccgtcattgctg 564
>gb|DQ428479.1| Sorghum bicolor voucher NSL51030 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 127 aaaatcgatgcggataagctgttcaatctattttctatttatggaaatatagtgagaatc 186 ||||| |||| ||||||||| |||||||| ||||| | |||||||| ||||| ||||| Sbjct: 198 aaaattgatgaggataagcttttcaatctgttttccttgtatggaaacatagtaagaatt 257 Query: 187 aaggtactccgcaataaaccagaccatgccctcgtccagatggctgatggg 237 ||| |||| || || |||||||| |||||||| || |||||||||||||| Sbjct: 258 aagatactgcggaacaaaccagatcatgcccttgttgagatggctgatggg 308 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 370 aaccggttcaacagtaatgtggcgaagaactaccgccattgctg 413 |||||||||||||| || |||| ||||||||||| |||||||| Sbjct: 521 aaccggttcaacagcaacgtggtcaagaactaccgtcattgctg 564
>gb|DQ428478.1| Sorghum bicolor voucher NSL50875 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 127 aaaatcgatgcggataagctgttcaatctattttctatttatggaaatatagtgagaatc 186 ||||| |||| ||||||||| |||||||| ||||| | |||||||| ||||| ||||| Sbjct: 198 aaaattgatgaggataagcttttcaatctgttttccttgtatggaaacatagtaagaatt 257 Query: 187 aaggtactccgcaataaaccagaccatgccctcgtccagatggctgatggg 237 ||| |||| || || |||||||| |||||||| || |||||||||||||| Sbjct: 258 aagatactgcggaacaaaccagatcatgcccttgttgagatggctgatggg 308 Score = 52.0 bits (26), Expect = 0.002 Identities = 104/130 (80%) Strand = Plus / Plus Query: 284 ttgggcagaaactggaagtgaacttctctaagtacccgagtattacccctgctcctgatg 343 ||||| ||||||||||||| |||| ||| |||||||| | || || ||||| || || | Sbjct: 435 ttgggaagaaactggaagttaactactcaaagtaccctaacatcacacctgccccagacg 494 Query: 344 cacatgactactcaacctccaaccttaaccggttcaacagtaatgtggcgaagaactacc 403 | || || |||| | ||| | ||| |||||||||||||| || |||| |||||||||| Sbjct: 495 cccacgattacttgaactcaagcctgaaccggttcaacagcaacgtggtcaagaactacc 554 Query: 404 gccattgctg 413 | |||||||| Sbjct: 555 gtcattgctg 564
>gb|DQ428477.1| Sorghum bicolor voucher BTx623 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 127 aaaatcgatgcggataagctgttcaatctattttctatttatggaaatatagtgagaatc 186 ||||| |||| ||||||||| |||||||| ||||| | |||||||| ||||| ||||| Sbjct: 198 aaaattgatgaggataagcttttcaatctgttttccttgtatggaaacatagtaagaatt 257 Query: 187 aaggtactccgcaataaaccagaccatgccctcgtccagatggctgatggg 237 ||| |||| || || |||||||| |||||||| || |||||||||||||| Sbjct: 258 aagatactgcggaacaaaccagatcatgcccttgttgagatggctgatggg 308 Score = 52.0 bits (26), Expect = 0.002 Identities = 104/130 (80%) Strand = Plus / Plus Query: 284 ttgggcagaaactggaagtgaacttctctaagtacccgagtattacccctgctcctgatg 343 ||||| ||||||||||||| |||| ||| |||||||| | || || ||||| || || | Sbjct: 435 ttgggaagaaactggaagttaactactcaaagtaccctaacatcacacctgccccagacg 494 Query: 344 cacatgactactcaacctccaaccttaaccggttcaacagtaatgtggcgaagaactacc 403 | || || |||| | ||| | ||| |||||||||||||| || |||| |||||||||| Sbjct: 495 cccacgattacttgaactcaagcctgaaccggttcaacagcaacgtggtcaagaactacc 554 Query: 404 gccattgctg 413 | |||||||| Sbjct: 555 gtcattgctg 564
>emb|AJ549383.1|CAR549383 Cicer arietinum mRNA for polypyrimidine track-binding protein homologue (ptb gene), clone CanPTB Length = 1687 Score = 69.9 bits (35), Expect = 9e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 123 tgataaaatcgatgcggataagctgttcaatctattttctatttatggaaatatagtgag 182 ||||| |||||||| |||||| |||||||| | || ||||||||||| || || || || Sbjct: 838 tgatagaatcgatgaggataaactgttcaacttgttctctatttatggtaacattgtcag 897 Query: 183 aatcaaggtactccgcaataaaccagaccatgccctcgtccagatgg 229 |||||| | ||||| ||||||||||| ||||| || |||||||||| Sbjct: 898 aatcaaacttctccgaaataaaccagatcatgcacttgtccagatgg 944
>gb|BT017944.1| Zea mays clone EL01N0521D08.c mRNA sequence Length = 430 Score = 56.0 bits (28), Expect = 1e-04 Identities = 118/148 (79%) Strand = Plus / Plus Query: 290 agaaactggaagtgaacttctctaagtacccgagtattacccctgctcctgatgcacatg 349 ||||||||||||| |||| ||| ||||| || | || || ||||||||||| || || | Sbjct: 111 agaaactggaagttaactactcaaagtatcctaacatcacacctgctcctgacgcccacg 170 Query: 350 actactcaacctccaaccttaaccggttcaacagtaatgtggcgaagaactaccgccatt 409 |||||| || ||| | | | |||||||||||||| || |||| || | |||||| |||| Sbjct: 171 actacttaaactcaagcataaaccggttcaacagcaacgtggtcaacacctaccgacatt 230 Query: 410 gctgtgctccgaccaagatcatccacat 437 |||| |||| || ||||| |||||||| Sbjct: 231 gctgctctccaacgaagatgatccacat 258
>ref|NM_103470.3| Arabidopsis thaliana RNA binding / nucleic acid binding AT1G43190 mRNA, complete cds Length = 1749 Score = 46.1 bits (23), Expect = 0.14 Identities = 74/91 (81%) Strand = Plus / Plus Query: 139 gataagctgttcaatctattttctatttatggaaatatagtgagaatcaaggtactccgc 198 |||||||| ||||||||||||||| |||| || || || || || || ||| | || || Sbjct: 906 gataagctattcaatctattttctctttacgggaacattgtaaggattaagcttcttcgg 965 Query: 199 aataaaccagaccatgccctcgtccagatgg 229 || ||||| ||||||||||| ||||| |||| Sbjct: 966 aacaaacctgaccatgcccttgtccaaatgg 996
>gb|AC005687.1| Arabidopsis thaliana BAC F1I21 from chromosome 1, near 59 cM, complete sequence Length = 129271 Score = 46.1 bits (23), Expect = 0.14 Identities = 74/91 (81%) Strand = Plus / Minus Query: 139 gataagctgttcaatctattttctatttatggaaatatagtgagaatcaaggtactccgc 198 |||||||| ||||||||||||||| |||| || || || || || || ||| | || || Sbjct: 48072 gataagctattcaatctattttctctttacgggaacattgtaaggattaagcttcttcgg 48013 Query: 199 aataaaccagaccatgccctcgtccagatgg 229 || ||||| ||||||||||| ||||| |||| Sbjct: 48012 aacaaacctgaccatgcccttgtccaaatgg 47982
>gb|BT015028.1| Arabidopsis thaliana At1g43190 mRNA, complete cds Length = 1299 Score = 46.1 bits (23), Expect = 0.14 Identities = 74/91 (81%) Strand = Plus / Plus Query: 139 gataagctgttcaatctattttctatttatggaaatatagtgagaatcaaggtactccgc 198 |||||||| ||||||||||||||| |||| || || || || || || ||| | || || Sbjct: 778 gataagctattcaatctattttctctttacgggaacattgtaaggattaagcttcttcgg 837 Query: 199 aataaaccagaccatgccctcgtccagatgg 229 || ||||| ||||||||||| ||||| |||| Sbjct: 838 aacaaacctgaccatgcccttgtccaaatgg 868
>gb|BT014899.1| Arabidopsis thaliana At1g43190 mRNA, complete cds Length = 1561 Score = 46.1 bits (23), Expect = 0.14 Identities = 74/91 (81%) Strand = Plus / Plus Query: 139 gataagctgttcaatctattttctatttatggaaatatagtgagaatcaaggtactccgc 198 |||||||| ||||||||||||||| |||| || || || || || || ||| | || || Sbjct: 864 gataagctattcaatctattttctctttacgggaacattgtaaggattaagcttcttcgg 923 Query: 199 aataaaccagaccatgccctcgtccagatgg 229 || ||||| ||||||||||| ||||| |||| Sbjct: 924 aacaaacctgaccatgcccttgtccaaatgg 954
>emb|BX817132.1|CNS0AEHF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH87ZH02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1580 Score = 46.1 bits (23), Expect = 0.14 Identities = 74/91 (81%) Strand = Plus / Plus Query: 139 gataagctgttcaatctattttctatttatggaaatatagtgagaatcaaggtactccgc 198 |||||||| ||||||||||||||| |||| || || || || || || ||| | || || Sbjct: 877 gataagctattcaatctattttctctttacgggaacattgtaaggattaagcttcttcgg 936 Query: 199 aataaaccagaccatgccctcgtccagatgg 229 || ||||| ||||||||||| ||||| |||| Sbjct: 937 aacaaacctgaccatgcccttgtccaaatgg 967
>emb|BX816341.1|CNS0AEGA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH42ZB09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1541 Score = 46.1 bits (23), Expect = 0.14 Identities = 74/91 (81%) Strand = Plus / Plus Query: 139 gataagctgttcaatctattttctatttatggaaatatagtgagaatcaaggtactccgc 198 |||||||| ||||||||||||||| |||| || || || || || || ||| | || || Sbjct: 846 gataagctattcaatctattttctctttacgggaacattgtaaggattaagcttcttcgg 905 Query: 199 aataaaccagaccatgccctcgtccagatgg 229 || ||||| ||||||||||| ||||| |||| Sbjct: 906 aacaaacctgaccatgcccttgtccaaatgg 936
>emb|BX816553.1|CNS0AE3K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH55ZA09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1533 Score = 46.1 bits (23), Expect = 0.14 Identities = 74/91 (81%) Strand = Plus / Plus Query: 139 gataagctgttcaatctattttctatttatggaaatatagtgagaatcaaggtactccgc 198 |||||||| ||||||||||||||| |||| || || || || || || ||| | || || Sbjct: 886 gataagctattcaatctattttctctttacgggaacattgtaaggattaagcttcttcgg 945 Query: 199 aataaaccagaccatgccctcgtccagatgg 229 || ||||| ||||||||||| ||||| |||| Sbjct: 946 aacaaacctgaccatgcccttgtccaaatgg 976
>emb|BX816106.1|CNS0AE43 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH28ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1663 Score = 46.1 bits (23), Expect = 0.14 Identities = 74/91 (81%) Strand = Plus / Plus Query: 139 gataagctgttcaatctattttctatttatggaaatatagtgagaatcaaggtactccgc 198 |||||||| ||||||||||||||| |||| || || || || || || ||| | || || Sbjct: 908 gataagctattcaatctattttctctttacgggaacattgtaaggattaagcttcttcgg 967 Query: 199 aataaaccagaccatgccctcgtccagatgg 229 || ||||| ||||||||||| ||||| |||| Sbjct: 968 aacaaacctgaccatgcccttgtccaaatgg 998
>ref|NM_001018140.1| Danio rerio DNA (cytosine-5-)-methyltransferase 6 (dnmt6), mRNA Length = 3377 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 26 aggctgcggtgattgctgctgcatt 50 ||||||||||| ||||||||||||| Sbjct: 457 aggctgcggtggttgctgctgcatt 433
>gb|AC107058.4| Homo sapiens BAC clone RP11-633G11 from 4, complete sequence Length = 126135 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 tctattttctatttatggaaa 173 ||||||||||||||||||||| Sbjct: 21208 tctattttctatttatggaaa 21188
>emb|BX571720.6| Zebrafish DNA sequence from clone DKEY-77G5 in linkage group 17, complete sequence Length = 227706 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 26 aggctgcggtgattgctgctgcatt 50 ||||||||||| ||||||||||||| Sbjct: 165393 aggctgcggtggttgctgctgcatt 165417
>dbj|AB196917.1| Danio rerio dnmt6 mRNA for DNA methyltransferase, complete cds Length = 3377 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 26 aggctgcggtgattgctgctgcatt 50 ||||||||||| ||||||||||||| Sbjct: 457 aggctgcggtggttgctgctgcatt 433
>gb|AC013288.7|AC013288 Arabidopsis thaliana chromosome 1 BAC F4N21 genomic sequence, complete sequence Length = 96899 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 tattttctatttatggaaata 175 ||||||||||||||||||||| Sbjct: 45176 tattttctatttatggaaata 45156
>emb|AJ414168.1|NTA414168 Nicotiana tabacum partial ORF3 and ORF4, pararetrovirus-like sequence, V9 Length = 4274 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 tcaatctattttctatttatg 169 ||||||||||||||||||||| Sbjct: 3918 tcaatctattttctatttatg 3898
>gb|AF022814.1|AF022814 Fugu rubripes transcription factor (SLP-1) and heme-oxygenase genes, complete cds Length = 37400 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 557 tcgagagcgaggaagaggcga 577 ||||||||||||||||||||| Sbjct: 20010 tcgagagcgaggaagaggcga 20030
>gb|AC116683.7| Mus musculus chromosome 7, clone RP24-472H13, complete sequence Length = 126085 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 289 cagaaactggaagtgaacttctcta 313 |||||||||||||||||||| |||| Sbjct: 66060 cagaaactggaagtgaacttttcta 66084
>gb|AC129332.6| Mus musculus BAC clone RP23-91I19 from chromosome 9, complete sequence Length = 219117 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 tggaacattgcctcctggag 73 |||||||||||||||||||| Sbjct: 23803 tggaacattgcctcctggag 23784
>gb|AY861243.1| Cottus gobio microsatellite CottE2 sequence Length = 613 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 564 cgaggaagaggcgaccgaag 583 |||||||||||||||||||| Sbjct: 539 cgaggaagaggcgaccgaag 558
>emb|Z78022.1|HS37M17 Human DNA sequence from clone RP1-37M17 on chromosome X Contains the 5' end of the RAP2C gene for RAP2C (member of RAS oncogene family), a novel gene and a CpG island, complete sequence Length = 101076 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ttcaatctattttctattta 167 |||||||||||||||||||| Sbjct: 85325 ttcaatctattttctattta 85344
>gb|AC159886.2| Mus musculus BAC clone RP24-397P9 from chromosome 9, complete sequence Length = 191328 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cttgggcagaaactggaagt 302 |||||||||||||||||||| Sbjct: 122397 cttgggcagaaactggaagt 122378
>gb|AC012572.17| Homo sapiens chromosome 18, clone RP11-123I22, complete sequence Length = 172637 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tgcctcctggagtgactggt 81 |||||||||||||||||||| Sbjct: 43163 tgcctcctggagtgactggt 43144
>gb|AC160983.2| Mus musculus BAC clone RP23-335A9 from chromosome 9, complete sequence Length = 188085 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 tggaacattgcctcctggag 73 |||||||||||||||||||| Sbjct: 4787 tggaacattgcctcctggag 4806
>ref|XM_686228.1| PREDICTED: Danio rerio similar to novel PH domain-containing protein (LOC562861), mRNA Length = 4417 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 atgttacttgggcagaaact 296 |||||||||||||||||||| Sbjct: 1643 atgttacttgggcagaaact 1662
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 gctgcggtgattgctgctgc 47 |||||||||||||||||||| Sbjct: 591574 gctgcggtgattgctgctgc 591593
>gb|AC160131.2| Mus musculus BAC clone RP23-226D9 from chromosome 12, complete sequence Length = 202807 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 atatagtgagaatcaaggta 192 |||||||||||||||||||| Sbjct: 62707 atatagtgagaatcaaggta 62688
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 tttctatttatggaaatata 177 |||||||||||||||||||| Sbjct: 2708380 tttctatttatggaaatata 2708399
>gb|AC079148.9| Homo sapiens BAC clone RP11-111J6 from 2, complete sequence Length = 176690 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcttgctatacactatttaa 268 |||||||||||||||||||| Sbjct: 60026 gcttgctatacactatttaa 60007
>dbj|BA000013.4| Mesorhizobium loti MAFF303099 pMLa DNA, cpmplete genome Length = 351911 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 ctgtgctccgaccaagatcatcca 434 ||||||||||| |||||||||||| Sbjct: 337293 ctgtgctccgaacaagatcatcca 337270
>emb|AL929305.4| Zebrafish DNA sequence from clone DKEY-110K5, complete sequence Length = 166110 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 tgctgctgcatttggtggaacatt 62 |||||||||||||||||| ||||| Sbjct: 33928 tgctgctgcatttggtggcacatt 33951
>ref|NM_211666.1| Eremothecium gossypii AGL062Cp (AGL062C), mRNA Length = 3333 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 gctgcggtgattgctgctgc 47 |||||||||||||||||||| Sbjct: 1456 gctgcggtgattgctgctgc 1437
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 tttctatttatggaaatata 177 |||||||||||||||||||| Sbjct: 1584814 tttctatttatggaaatata 1584795 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,664,662 Number of Sequences: 3902068 Number of extensions: 4664662 Number of successful extensions: 84797 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 65 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84534 Number of HSP's gapped (non-prelim): 245 length of query: 618 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 595 effective length of database: 17,143,297,704 effective search space: 10200262133880 effective search space used: 10200262133880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
