ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags36p03 |
|---|---|
| Clone Library Name | barley_pub |
>SPFH2_PONPY (Q5R7C5) SPFH domain-containing protein 2 precursor| Length = 339 Score = 226 bits (575), Expect = 4e-59 Identities = 105/168 (62%), Positives = 134/168 (79%) Frame = +3 Query: 12 KFPKVHVGVYWRGGALLKTITTPGYHLKLPFITQFEPIQVTLQTDQVKGIPCGTKGGVMI 191 K + H+GVY+RGGALL + + PG+HL LPFIT ++ +Q TLQTD+VK +PCGT GGVMI Sbjct: 25 KIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMI 84 Query: 192 SFDKIEVVNRLNKDFVYDTLLNYGVHYDKTWIYDKIHHEINQFCSAHSLQQVYIDMFDQI 371 FD+IEVVN L + VYD + NY YDK I++KIHHE+NQFCS H+LQ+VYI++FDQI Sbjct: 85 YFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQI 144 Query: 372 DETMKEAIQRDCTRYAPGIEIISVRVTKPNIPVSIRRNFELMEEERTK 515 DE +K A+Q+D T APG+ I +VRVTKPNIP +IRRN+ELME E+TK Sbjct: 145 DENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTK 192
>SPFH2_HUMAN (O94905) SPFH domain-containing protein 2 precursor| Length = 339 Score = 226 bits (575), Expect = 4e-59 Identities = 105/168 (62%), Positives = 134/168 (79%) Frame = +3 Query: 12 KFPKVHVGVYWRGGALLKTITTPGYHLKLPFITQFEPIQVTLQTDQVKGIPCGTKGGVMI 191 K + H+GVY+RGGALL + + PG+HL LPFIT ++ +Q TLQTD+VK +PCGT GGVMI Sbjct: 25 KIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMI 84 Query: 192 SFDKIEVVNRLNKDFVYDTLLNYGVHYDKTWIYDKIHHEINQFCSAHSLQQVYIDMFDQI 371 FD+IEVVN L + VYD + NY YDK I++KIHHE+NQFCS H+LQ+VYI++FDQI Sbjct: 85 YFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQI 144 Query: 372 DETMKEAIQRDCTRYAPGIEIISVRVTKPNIPVSIRRNFELMEEERTK 515 DE +K A+Q+D T APG+ I +VRVTKPNIP +IRRN+ELME E+TK Sbjct: 145 DENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTK 192
>SPFH2_MOUSE (Q8BFZ9) SPFH domain-containing protein 2 precursor| Length = 340 Score = 226 bits (575), Expect = 4e-59 Identities = 105/168 (62%), Positives = 134/168 (79%) Frame = +3 Query: 12 KFPKVHVGVYWRGGALLKTITTPGYHLKLPFITQFEPIQVTLQTDQVKGIPCGTKGGVMI 191 K + H+GVY+RGGALL + + PG+HL LPFIT ++ +Q TLQTD+VK +PCGT GGVMI Sbjct: 25 KIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMI 84 Query: 192 SFDKIEVVNRLNKDFVYDTLLNYGVHYDKTWIYDKIHHEINQFCSAHSLQQVYIDMFDQI 371 FD+IEVVN L + VYD + NY YDK I++KIHHE+NQFCS H+LQ+VYI++FDQI Sbjct: 85 YFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQI 144 Query: 372 DETMKEAIQRDCTRYAPGIEIISVRVTKPNIPVSIRRNFELMEEERTK 515 DE +K A+Q+D T APG+ I +VRVTKPNIP +IRRN+ELME E+TK Sbjct: 145 DENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTK 192
>SPFH1_MOUSE (Q91X78) SPFH domain-containing protein 1 precursor (KE04 protein| homolog) Length = 346 Score = 221 bits (564), Expect = 7e-58 Identities = 104/168 (61%), Positives = 131/168 (77%) Frame = +3 Query: 12 KFPKVHVGVYWRGGALLKTITTPGYHLKLPFITQFEPIQVTLQTDQVKGIPCGTKGGVMI 191 K + H+ VY+RGGALL + + PGYH+ LPFIT F +Q TLQTD+VK +PCGT GGVMI Sbjct: 25 KIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITTFRSVQTTLQTDEVKNVPCGTSGGVMI 84 Query: 192 SFDKIEVVNRLNKDFVYDTLLNYGVHYDKTWIYDKIHHEINQFCSAHSLQQVYIDMFDQI 371 D+IEVVN L V+D + NY YDKT I++KIHHE+NQFCSAH+LQ+VYI++FDQI Sbjct: 85 YIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFNKIHHELNQFCSAHTLQEVYIELFDQI 144 Query: 372 DETMKEAIQRDCTRYAPGIEIISVRVTKPNIPVSIRRNFELMEEERTK 515 DE +K+A+Q+D APG+ I +VRVTKP IP +IRRNFELME E+TK Sbjct: 145 DENLKQALQKDLNTMAPGLTIQAVRVTKPKIPEAIRRNFELMEAEKTK 192
>SPFH1_PONPY (Q5RCJ9) SPFH domain-containing protein 1 precursor| Length = 346 Score = 221 bits (563), Expect = 9e-58 Identities = 104/168 (61%), Positives = 131/168 (77%) Frame = +3 Query: 12 KFPKVHVGVYWRGGALLKTITTPGYHLKLPFITQFEPIQVTLQTDQVKGIPCGTKGGVMI 191 K + H+ VY+RGGALL + + PGYH+ LPFIT F +Q TLQTD+VK +PCGT GGVMI Sbjct: 25 KIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITTFRSVQTTLQTDEVKNVPCGTSGGVMI 84 Query: 192 SFDKIEVVNRLNKDFVYDTLLNYGVHYDKTWIYDKIHHEINQFCSAHSLQQVYIDMFDQI 371 D+IEVVN L V+D + NY YDKT I++KIHHE+NQFCSAH+LQ+VYI++FDQI Sbjct: 85 YIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFNKIHHELNQFCSAHTLQEVYIELFDQI 144 Query: 372 DETMKEAIQRDCTRYAPGIEIISVRVTKPNIPVSIRRNFELMEEERTK 515 DE +K+A+Q+D APG+ I +VRVTKP IP +IRRNFELME E+TK Sbjct: 145 DENLKQALQKDLNLMAPGLTIQAVRVTKPKIPEAIRRNFELMEAEKTK 192
>SPFH1_HUMAN (O75477) SPFH domain-containing protein 1 precursor (Protein KE04)| Length = 346 Score = 221 bits (563), Expect = 9e-58 Identities = 104/168 (61%), Positives = 131/168 (77%) Frame = +3 Query: 12 KFPKVHVGVYWRGGALLKTITTPGYHLKLPFITQFEPIQVTLQTDQVKGIPCGTKGGVMI 191 K + H+ VY+RGGALL + + PGYH+ LPFIT F +Q TLQTD+VK +PCGT GGVMI Sbjct: 25 KIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITTFRSVQTTLQTDEVKNVPCGTSGGVMI 84 Query: 192 SFDKIEVVNRLNKDFVYDTLLNYGVHYDKTWIYDKIHHEINQFCSAHSLQQVYIDMFDQI 371 D+IEVVN L V+D + NY YDKT I++KIHHE+NQFCSAH+LQ+VYI++FDQI Sbjct: 85 YIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFNKIHHELNQFCSAHTLQEVYIELFDQI 144 Query: 372 DETMKEAIQRDCTRYAPGIEIISVRVTKPNIPVSIRRNFELMEEERTK 515 DE +K+A+Q+D APG+ I +VRVTKP IP +IRRNFELME E+TK Sbjct: 145 DENLKQALQKDLNLMAPGLTIQAVRVTKPKIPEAIRRNFELMEAEKTK 192
>HFLC_BUCBP (Q89A40) Protein hflC (EC 3.4.-.-)| Length = 326 Score = 32.7 bits (73), Expect = 0.61 Identities = 25/121 (20%), Positives = 51/121 (42%), Gaps = 15/121 (12%) Frame = +3 Query: 78 PGYHLKLPFITQFEPIQVTLQTDQVKGIPCGTKGGVMISFDKIEVVNRLNKDFVYDTLLN 257 PG H+KLPFI + +QT I V+ + NK+ V +T +N Sbjct: 50 PGLHIKLPFIESVKIFNSKIQT---------------IDNRLDSVLTKDNKNLVLNTYIN 94 Query: 258 Y---------------GVHYDKTWIYDKIHHEINQFCSAHSLQQVYIDMFDQIDETMKEA 392 + ++Y +T I K ++ + S +++++ ++ DQ+ +K + Sbjct: 95 WKINDFCRYYLSTGEDNIYYAETLIKQKFNNRLRAQISHLNIKEIIFNVKDQLTSNIKYS 154 Query: 393 I 395 + Sbjct: 155 L 155
>FOLB_METEX (P71513) Dihydroneopterin aldolase (EC 4.1.2.25) (DHNA)| Length = 130 Score = 32.7 bits (73), Expect = 0.61 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = +3 Query: 375 ETMKEAIQRDCTRYAPGIEIISVRVTKPNIPVSIRRNFELMEEERTKA 518 E + EAI C P IE I+VR+ KP+ P+ ++ +E R ++ Sbjct: 74 EALAEAIAETCLARFPRIETIAVRIDKPSAPIPAVLDYAAIEIVRGRS 121
>HFLC_HAEIN (P44545) Protein hflC (EC 3.4.-.-)| Length = 295 Score = 32.3 bits (72), Expect = 0.80 Identities = 33/156 (21%), Positives = 63/156 (40%), Gaps = 12/156 (7%) Frame = +3 Query: 78 PGYHLKLPFITQFEPIQVTLQTDQVKGIPCGTKGGVMISFDKIEVVNRLNKDFVYDTLLN 257 PG H K+P I + + ++T G F +E + L +V + + Sbjct: 50 PGLHFKVPLIDSIKVLDARIRT----------LDGSATRFVTVEKKDLLVDSYVKWKISD 99 Query: 258 YGVHYDKTWIYD----------KIHHEINQFCSAHSLQQVYIDMFDQIDETMKEAIQRDC 407 +G Y T D K++ + + +++ + ++ E K+A+ Sbjct: 100 FGRFYTSTGGGDYAQAANLLSRKVNDRLRSEIGSRTIKDIVSGTRGELMEGAKKALSSGQ 159 Query: 408 TRYAP-GIEIISVRVTKPNIPVSIRRN-FELMEEER 509 A GIE+I VRV + N+P + + ++ M ER Sbjct: 160 DSTAELGIEVIDVRVKQINLPDEVSSSIYQRMRAER 195
>CLOT_PENMO (Q9U572) Hemolymph clottable protein precursor| Length = 1670 Score = 31.6 bits (70), Expect = 1.4 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%) Frame = +3 Query: 336 LQQVYIDMFDQIDETMKEAIQRDC--TRYAPGIEIIS 440 L + D+ + E +KEAI++ C + YAPGI+II+ Sbjct: 1242 LLEASFDVSSNVKERVKEAIEKGCDYSTYAPGIDIIT 1278
>KUP1_RALSO (Q8XR16) Probable potassium transport system protein kup 1| Length = 613 Score = 30.8 bits (68), Expect = 2.3 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 12/99 (12%) Frame = -2 Query: 449 NTNTDNLNSRSIARAVPLDSFFHGLIN----LIEHVNVNL---LQTMSTAELVYLMMNFV 291 +T T L +R++ +PL+ F GL++ ++ V L ++ + A L L N V Sbjct: 431 HTGTQLLKARNVEGGIPLEPFMEGLLSHPPYRVDGTAVYLTPSIEFVPLALLHNLKHNHV 490 Query: 290 IYPCLIIMH----TIIE*GVINKVFIKTI-DNLYLVKAD 189 ++ ++ +H + ++ +KTI DNLY V AD Sbjct: 491 LHSRVLFIHFRTQAVPYVEPAKRLVVKTIGDNLYAVAAD 529
>DR111_ARATH (P42698) DNA-damage-repair/toleration protein DRT111, chloroplast| precursor Length = 387 Score = 30.4 bits (67), Expect = 3.0 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 3/54 (5%) Frame = +3 Query: 366 QIDETMKEAIQRDCTRYAPGIEIISVRVTKPNIPV--SIRRNFELME-EERTKA 518 Q+D+ +++ + +C +Y ++ +T+PN PV ++R + EE TKA Sbjct: 295 QVDDELEDEVGGECGKYGTVTRVLIFEITEPNFPVHEAVRIFVQFSRPEETTKA 348
>RPOB2_METVA (P41558) DNA-directed RNA polymerase subunit B'' (EC 2.7.7.6)| Length = 499 Score = 30.4 bits (67), Expect = 3.0 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +3 Query: 144 DQVKGIPCGTKGGVMISFDKIEVVNRLNKD 233 D+V G+ KGG +SF K+ V +NK+ Sbjct: 37 DEVTGVETEIKGGYKVSFGKVRVTKPINKE 66
>GR22F_DROME (P58954) Putative gustatory receptor 22f| Length = 378 Score = 29.6 bits (65), Expect = 5.2 Identities = 22/90 (24%), Positives = 44/90 (48%) Frame = -2 Query: 467 RYVWLCNTNTDNLNSRSIARAVPLDSFFHGLINLIEHVNVNLLQTMSTAELVYLMMNFVI 288 RYVWL N ++ + S +R L S + L+ L E L+ + +L+ +++ ++I Sbjct: 201 RYVWLVNETLEDSHHLSSSRIHALASLYDRLLKLSE-----LVVACNDLQLILMLIIYLI 255 Query: 287 YPCLIIMHTIIE*GVINKVFIKTIDNLYLV 198 + I I+ +NK +I + + L+ Sbjct: 256 GNTVQIFFLIVLGVSMNKRYIYLVASPQLI 285
>YL17_CAEEL (Q11102) Hypothetical protein C02F12.7| Length = 1130 Score = 28.9 bits (63), Expect = 8.9 Identities = 16/62 (25%), Positives = 34/62 (54%) Frame = +3 Query: 321 CSAHSLQQVYIDMFDQIDETMKEAIQRDCTRYAPGIEIISVRVTKPNIPVSIRRNFELME 500 C + L++ Y + ++++E+ + + +D R A IEI ++R K + IR + +E Sbjct: 498 CKLNELEEQYTSLKEELEESAR--LDKDELREASEIEIQALRTEKSILAAEIRVLTQKIE 555 Query: 501 EE 506 +E Sbjct: 556 DE 557
>NU6M_RHISA (O99827) NADH-ubiquinone oxidoreductase chain 6 (EC 1.6.5.3) (NADH| dehydrogenase subunit 6) Length = 149 Score = 28.9 bits (63), Expect = 8.9 Identities = 17/50 (34%), Positives = 29/50 (58%) Frame = -2 Query: 404 VPLDSFFHGLINLIEHVNVNLLQTMSTAELVYLMMNFVIYPCLIIMHTII 255 +P DSF + +E +N+N + +++ ++ LMM F LI+M TII Sbjct: 94 IPYDSF----MTKLEMININKIYSVNFVNMIILMMIF-----LIVMLTII 134
>GIDA_BACHK (Q6HAF3) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 629 Score = 28.9 bits (63), Expect = 8.9 Identities = 16/54 (29%), Positives = 27/54 (50%) Frame = +3 Query: 291 DKIHHEINQFCSAHSLQQVYIDMFDQIDETMKEAIQRDCTRYAPGIEIISVRVT 452 DK H+I + Q+VY+ + ++ E +QRD R PG+E + + T Sbjct: 289 DKPRHQIFLEPEGRNTQEVYVQ---GLSTSLPEDVQRDMLRTIPGLENVEMMRT 339
>GIDA_BACCR (Q814F7) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 629 Score = 28.9 bits (63), Expect = 8.9 Identities = 16/54 (29%), Positives = 27/54 (50%) Frame = +3 Query: 291 DKIHHEINQFCSAHSLQQVYIDMFDQIDETMKEAIQRDCTRYAPGIEIISVRVT 452 DK H+I + Q+VY+ + ++ E +QRD R PG+E + + T Sbjct: 289 DKPRHQIFLEPEGRNTQEVYVQ---GLSTSLPEDVQRDMLRTIPGLENVEMMRT 339
>GIDA_BACC1 (Q72WU4) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 629 Score = 28.9 bits (63), Expect = 8.9 Identities = 16/54 (29%), Positives = 27/54 (50%) Frame = +3 Query: 291 DKIHHEINQFCSAHSLQQVYIDMFDQIDETMKEAIQRDCTRYAPGIEIISVRVT 452 DK H+I + Q+VY+ + ++ E +QRD R PG+E + + T Sbjct: 289 DKPRHQIFLEPEGRNTQEVYVQ---GLSTSLPEDVQRDMLRTIPGLENVEMMRT 339
>GIDA_BACAN (Q81JH3) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 629 Score = 28.9 bits (63), Expect = 8.9 Identities = 16/54 (29%), Positives = 27/54 (50%) Frame = +3 Query: 291 DKIHHEINQFCSAHSLQQVYIDMFDQIDETMKEAIQRDCTRYAPGIEIISVRVT 452 DK H+I + Q+VY+ + ++ E +QRD R PG+E + + T Sbjct: 289 DKPRHQIFLEPEGRNTQEVYVQ---GLSTSLPEDVQRDMLRTIPGLENVEMMRT 339 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,760,748 Number of Sequences: 219361 Number of extensions: 1622604 Number of successful extensions: 4449 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 4293 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4446 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
