ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags37d20 |
|---|---|
| Clone Library Name | barley_pub |
>RNF4_MOUSE (Q9QZS2) RING finger protein 4| Length = 194 Score = 58.2 bits (139), Expect = 2e-08 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 11/140 (7%) Frame = +3 Query: 6 HEAVTVVDLEAHVTREG----VTHDDNATVLSHNTRNKRQRVAPVVNISPETGEGSSLQS 173 +++V +V+ R G H D+ V S + R + V +P + + Sbjct: 68 NDSVVIVEERRRPRRNGRRLRQDHADSCVVSSDDEELSRDKDVYVTTHTPRS-------T 120 Query: 174 KSAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPA-------TTMCGHIFCTNCIKQAIQFQ 332 K G T P +CP+C + E +T CGH+FC+ C++ +++ Sbjct: 121 KDDGATGPRPSGTV------SCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA 174 Query: 333 KKCPTCRKHLKMNNFHRIYL 392 CPTCRK + +H IY+ Sbjct: 175 NTCPTCRKKINHKRYHPIYI 194
>RNF4_RAT (O88846) RING finger protein 4 (SNURF)| Length = 194 Score = 57.0 bits (136), Expect = 4e-08 Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 11/140 (7%) Frame = +3 Query: 6 HEAVTVVDLEAHVTREG----VTHDDNATVLSHNTRNKRQRVAPVVNISPETGEGSSLQS 173 +++V +V+ R G H D+ V S + + + V +P + + Sbjct: 68 NDSVVIVEERRRPRRNGRRLRQDHADSCVVSSDDEELSKDKDVYVTTHTPRS-------T 120 Query: 174 KSAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPA-------TTMCGHIFCTNCIKQAIQFQ 332 K G T P +CP+C + E +T CGH+FC+ C++ +++ Sbjct: 121 KDEGTTGLRPSGTV------SCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA 174 Query: 333 KKCPTCRKHLKMNNFHRIYL 392 CPTCRK + +H IY+ Sbjct: 175 NTCPTCRKKINHKRYHPIYI 194
>RNF4_HUMAN (P78317) RING finger protein 4| Length = 190 Score = 57.0 bits (136), Expect = 4e-08 Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 11/140 (7%) Frame = +3 Query: 6 HEAVTVVDLEAHVTREG----VTHDDNATVLSHNTRNKRQRVAPVVNISPETGEGSSLQS 173 +++V +VD R H D+ V S + R R V +P + Sbjct: 64 NDSVVIVDERRRPRRNARRLPQDHADSCVVSSDDEELSRDRDVYVTTHTPRN-------A 116 Query: 174 KSAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPA-------TTMCGHIFCTNCIKQAIQFQ 332 + G T P +CP+C + E +T CGH+FC+ C++ +++ Sbjct: 117 RDEGATGLRPSGTV------SCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA 170 Query: 333 KKCPTCRKHLKMNNFHRIYL 392 CPTCRK + +H IY+ Sbjct: 171 NTCPTCRKKINHKRYHPIYI 190
>RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (mCOP1) Length = 733 Score = 56.2 bits (134), Expect = 8e-08 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 11/97 (11%) Frame = +3 Query: 141 PETGEGSSLQSKSAGKTSKEPVKVTP-----------KEPIFTCPVCWNKLDEPATTMCG 287 P G G S S S G +S++ + P K F CP+C++ ++E T CG Sbjct: 97 PSAGVGGS--SSSLGSSSRKRPLLVPLCNGLLNSYEDKSNDFVCPICFDMIEEAYMTKCG 154 Query: 288 HIFCTNCIKQAIQFQKKCPTCRKHLKMNNFHRIYLPN 398 H FC CI Q+++ +CP C + ++N +Y PN Sbjct: 155 HSFCYKCIHQSLEDNNRCPKC--NYVVDNIDHLY-PN 188
>RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (hCOP1) Length = 731 Score = 55.1 bits (131), Expect = 2e-07 Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 11/97 (11%) Frame = +3 Query: 141 PETGEGSSLQSKSAGKTSKEPVKVTP-----------KEPIFTCPVCWNKLDEPATTMCG 287 P G G S S S G S++ + P K F CP+C++ ++E T CG Sbjct: 95 PSAGVGGS--SSSLGSGSRKRPLLAPLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCG 152 Query: 288 HIFCTNCIKQAIQFQKKCPTCRKHLKMNNFHRIYLPN 398 H FC CI Q+++ +CP C + ++N +Y PN Sbjct: 153 HSFCYKCIHQSLEDNNRCPKC--NYVVDNIDHLY-PN 186
>COP1_ARATH (P43254) Ubiquitin-protein ligase COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 675 Score = 54.7 bits (130), Expect = 2e-07 Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 3/95 (3%) Frame = +3 Query: 117 VAPVVNISPET---GEGSSLQSKSAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPATTMCG 287 V P V P T GEG++ G + + + CP+C + + T CG Sbjct: 9 VVPAVKPDPRTSSVGEGANRHENDDGGSGGSEIGAPDLDKDLLCPICMQIIKDAFLTACG 68 Query: 288 HIFCTNCIKQAIQFQKKCPTCRKHLKMNNFHRIYL 392 H FC CI ++ + CP C +HL N + +L Sbjct: 69 HSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFL 103
>BRE1A_MOUSE (Q5DTM8) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 973 Score = 52.8 bits (125), Expect = 8e-07 Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQF-QKKCPTCRKHLKMNNFHRIYL 392 TCP C + + T C H+FC C+K Q+KCP C N+FHRIY+ Sbjct: 919 TCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYI 972
>RAD18_ASHGO (Q75EN0) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 443 Score = 52.8 bits (125), Expect = 8e-07 Identities = 25/86 (29%), Positives = 43/86 (50%) Frame = +3 Query: 135 ISPETGEGSSLQSKSAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIK 314 +S + G+ + S AG T E + + + C +C + L P T CGH FC+ CI+ Sbjct: 1 MSIQPGQVVTDPSDFAGTTIPE---LADLDSLLRCHICKDMLQTPVLTQCGHTFCSLCIR 57 Query: 315 QAIQFQKKCPTCRKHLKMNNFHRIYL 392 + + + +CP C L+ N + +L Sbjct: 58 EYLNKESRCPLCLAELRQNMLQKEFL 83
>BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 984 Score = 52.8 bits (125), Expect = 8e-07 Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQF-QKKCPTCRKHLKMNNFHRIYL 392 TCP C + + T C H+FC C+K Q+KCP C N+FHRIY+ Sbjct: 930 TCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYI 983
>BRE1A_HUMAN (Q5VTR2) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 975 Score = 52.8 bits (125), Expect = 8e-07 Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQF-QKKCPTCRKHLKMNNFHRIYL 392 TCP C + + T C H+FC C+K Q+KCP C N+FHRIY+ Sbjct: 921 TCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYI 974
>RAD18_EMENI (Q02398) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 443 Score = 52.0 bits (123), Expect = 1e-06 Identities = 20/48 (41%), Positives = 27/48 (56%) Frame = +3 Query: 210 VTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCR 353 + P E C VC + D P T C H FC+ CI++ + + KCPTCR Sbjct: 21 LAPFETSLRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPTCR 68
>ZN313_RAT (Q6J2U6) Zinc finger protein 313| Length = 229 Score = 52.0 bits (123), Expect = 1e-06 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = +3 Query: 168 QSKSAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKK-CP 344 +S+ S +P T FTCPVC ++P CGH+FC+ C+++ ++ +K C Sbjct: 7 ESRDGAAQSAKPASETDPLSRFTCPVCLEVFEKPVQVPCGHVFCSACLQECLKPKKPVCG 66 Query: 345 TCRKHL 362 CR L Sbjct: 67 VCRSAL 72
>ZN313_MOUSE (Q9ET26) Zinc finger protein 313| Length = 229 Score = 52.0 bits (123), Expect = 1e-06 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = +3 Query: 168 QSKSAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKK-CP 344 +S+ S +P T FTCPVC ++P CGH+FC+ C+++ ++ +K C Sbjct: 7 ESRDGAAQSAKPASETDPLSRFTCPVCLEVFEKPVQVPCGHVFCSACLQECLKPKKPVCG 66 Query: 345 TCRKHL 362 CR L Sbjct: 67 VCRSAL 72
>RAD18_ASPFU (Q4WZJ6) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 418 Score = 52.0 bits (123), Expect = 1e-06 Identities = 20/48 (41%), Positives = 27/48 (56%) Frame = +3 Query: 210 VTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCR 353 V+P E C VC + D P T C H FC+ CI++ + + KCP CR Sbjct: 21 VSPLESSLRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPACR 68
>RAD18_NEUCR (P33288) Postreplication repair ubiquitin-protein ligase E3 rad-18| (EC 6.-.-.-) (UV radiation sensitivity protein 2) Length = 501 Score = 51.6 bits (122), Expect = 2e-06 Identities = 20/46 (43%), Positives = 25/46 (54%) Frame = +3 Query: 216 PKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCR 353 P E F C VC + D P T C H FC+ CI++ + KCP CR Sbjct: 27 PVEQAFRCHVCKDFYDSPMLTSCNHTFCSLCIRRCLSVDSKCPLCR 72
>RAD18_CANGA (Q6FPI4) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 411 Score = 50.8 bits (120), Expect = 3e-06 Identities = 26/78 (33%), Positives = 39/78 (50%) Frame = +3 Query: 165 LQSKSAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCP 344 L S + K SK P ++ + + C +C + L P T CGH FC+ CI+ + + KCP Sbjct: 4 LTSAADFKKSKVP-QLQELDDLLRCHICKDFLKNPVLTPCGHTFCSLCIRGYLSNEPKCP 62 Query: 345 TCRKHLKMNNFHRIYLPN 398 C L+ + YL N Sbjct: 63 LCLHELRESMLRSEYLVN 80
>BRE1B_PONPY (Q5RAU7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 50.8 bits (120), Expect = 3e-06 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQF-QKKCPTCRKHLKMNNFHRIYL 392 TCP C + + T C H+FC C++ + Q+KCP C ++FHRIY+ Sbjct: 947 TCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRIYI 1000
>BRE1B_MACFA (Q4R7K7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 50.8 bits (120), Expect = 3e-06 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQF-QKKCPTCRKHLKMNNFHRIYL 392 TCP C + + T C H+FC C++ + Q+KCP C ++FHRIY+ Sbjct: 947 TCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRIYI 1000
>BRE1B_HUMAN (O75150) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (95 kDa retinoblastoma-associated protein) (RBP95) Length = 1001 Score = 50.8 bits (120), Expect = 3e-06 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQF-QKKCPTCRKHLKMNNFHRIYL 392 TCP C + + T C H+FC C++ + Q+KCP C ++FHRIY+ Sbjct: 947 TCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRIYI 1000
>RN125_MOUSE (Q9D9R0) RING finger protein 125 (EC 6.3.2.-)| Length = 232 Score = 50.8 bits (120), Expect = 3e-06 Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 13/80 (16%) Frame = +3 Query: 162 SLQSKSAGKTSKEPVKVTPKE---------PI--FTCPVCWNKLDEPATTMCGHIFCTNC 308 SL S + K++ P TP+ PI F C VC L +P T CGH+FC +C Sbjct: 2 SLLSSDSSKSA--PASATPRTLERSGDSELPITSFDCSVCLEVLHQPVRTRCGHVFCRSC 59 Query: 309 IKQAIQFQKK--CPTCRKHL 362 I +I+ K CP CR +L Sbjct: 60 IATSIKNNNKWTCPYCRAYL 79
>BRE1B_MOUSE (Q3U319) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 50.4 bits (119), Expect = 4e-06 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQF-QKKCPTCRKHLKMNNFHRIYL 392 TCP C + + T C H+FC C++ + Q+KCP C ++FHR+Y+ Sbjct: 947 TCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYI 1000
>BRE1B_RAT (Q8CJB9) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (Syntaxin-1-interacting RING finger protein) (Protein staring) Length = 1002 Score = 50.4 bits (119), Expect = 4e-06 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQF-QKKCPTCRKHLKMNNFHRIYL 392 TCP C + + T C H+FC C++ + Q+KCP C ++FHR+Y+ Sbjct: 948 TCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYI 1001
>BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 828 Score = 50.1 bits (118), Expect = 5e-06 Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQF-QKKCPTCRKHLKMNNFHRIYL 392 TCP C + + C H+FC CIK Q+KCP C + N+FHRI++ Sbjct: 775 TCPSCKTRPKDCIMLKCYHLFCETCIKTMYDTRQRKCPKCNSNFGANDFHRIFI 828
>BRE1_CAEEL (P34537) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 837 Score = 50.1 bits (118), Expect = 5e-06 Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQF-QKKCPTCRKHLKMNNFHRIYL 392 TCP C + + C H+FC CIK Q+KCP C + N+FHRI++ Sbjct: 784 TCPSCKTRPKDCIMLKCYHLFCETCIKTMYDTRQRKCPKCNSNFGANDFHRIFI 837
>RN125_MACFA (Q95KF1) RING finger protein 125 (EC 6.3.2.-)| Length = 231 Score = 50.1 bits (118), Expect = 5e-06 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 12/79 (15%) Frame = +3 Query: 162 SLQSKSAGKTSKEPVKVTPKE---------PI--FTCPVCWNKLDEPATTMCGHIFCTNC 308 S+ S +GK++ P TP+ P+ F C VC L +P T CGH+FC +C Sbjct: 2 SVLSSDSGKSA--PPSATPRALERRGDPELPVTSFDCAVCLEVLHQPVRTRCGHVFCRSC 59 Query: 309 IKQAIQFQK-KCPTCRKHL 362 I +++ K CP CR +L Sbjct: 60 IATSLKNNKWTCPYCRAYL 78
>RN125_HUMAN (Q96EQ8) RING finger protein 125 (EC 6.3.2.-) (T-cell RING| activation protein 1) (TRAC-1) Length = 231 Score = 49.7 bits (117), Expect = 7e-06 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 3/52 (5%) Frame = +3 Query: 216 PKEPI--FTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK-KCPTCRKHL 362 P+ P+ F C VC L +P T CGH+FC +CI +++ K CP CR +L Sbjct: 27 PELPVTSFDCAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCPYCRAYL 78
>BRE1_DROME (Q9VRP9) Ubiquitin-protein ligase Bre1 (EC 6.3.2.-) (dBre1)| Length = 1044 Score = 49.7 bits (117), Expect = 7e-06 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQF-QKKCPTCRKHLKMNNFHRIYL 392 TCP C K + + C H+FC +C++ + Q+KCP C N++HR+YL Sbjct: 990 TCPSCKVKRKDAVLSKCFHVFCYDCLRTRYETRQRKCPKCNCAFGANDYHRLYL 1043
>PEX10_ARATH (Q9SYU4) Peroxisome assembly protein 10 (Peroxin-10) (AthPEX10)| (Pex10p) (PER8) Length = 381 Score = 49.3 bits (116), Expect = 9e-06 Identities = 22/71 (30%), Positives = 34/71 (47%) Frame = +3 Query: 141 PETGEGSSLQSKSAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQA 320 P E +L + A K + T E + C +C + P T CGH+FC +CI + Sbjct: 295 PVLNEEGNLITSEAEKGNWSTSDSTSTEAVGKCTLCLSTRQHPTATPCGHVFCWSCIMEW 354 Query: 321 IQFQKKCPTCR 353 +++CP CR Sbjct: 355 CNEKQECPLCR 365
>COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 672 Score = 48.5 bits (114), Expect = 2e-05 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 2/94 (2%) Frame = +3 Query: 117 VAPVVN--ISPETGEGSSLQSKSAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPATTMCGH 290 V P+V + PE + S + +AG P ++ + F CP+C + + T CGH Sbjct: 6 VGPLVPAVVKPEPSKNFSTDTTAAGTFLLVPT-MSDLDKDFLCPICMQIIKDAFLTACGH 64 Query: 291 IFCTNCIKQAIQFQKKCPTCRKHLKMNNFHRIYL 392 FC CI ++ + CP C +L +N +L Sbjct: 65 SFCYMCIITHLRNKSDCPCCGHYLTNSNLFPNFL 98
>BRE1_DEBHA (Q6BWW6) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 691 Score = 48.1 bits (113), Expect = 2e-05 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Frame = +3 Query: 228 IFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQ-KKCPTCRKHLKMNNFHRIYL 392 I C VC + A T+CGH+FC C ++ + + ++CPTC K N+ I+L Sbjct: 636 IAKCSVCSKNWKDTAITVCGHVFCLGCTQERLAARLRRCPTCNKGFSANDLLSIHL 691
>YNN1_CAEEL (Q03605) Hypothetical RING finger protein T02C1.1 in chromosome III| Length = 160 Score = 47.8 bits (112), Expect = 3e-05 Identities = 18/43 (41%), Positives = 23/43 (53%) Frame = +3 Query: 231 FTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKH 359 F C VC + EP CGH +C CI+ + +KCP CR H Sbjct: 6 FCCAVCLDFFVEPCIIECGHSYCRFCIESHLNINEKCPLCRAH 48
>ZN313_PANTR (Q6J212) Zinc finger protein 313| Length = 228 Score = 47.8 bits (112), Expect = 3e-05 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%) Frame = +3 Query: 168 QSKSAGKTSKEPVKVTPKEPI--FTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKK- 338 Q + G ++ +P+ FTCPVC ++P CGH+FC+ C+++ ++ +K Sbjct: 4 QQRDCGGAAQLAGPAAEADPLGRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPV 63 Query: 339 CPTCRKHL 362 C CR L Sbjct: 64 CGVCRSAL 71
>ZN313_HUMAN (Q9Y508) Zinc finger protein 313 (RING finger protein 114)| Length = 228 Score = 47.8 bits (112), Expect = 3e-05 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%) Frame = +3 Query: 168 QSKSAGKTSKEPVKVTPKEPI--FTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKK- 338 Q + G ++ +P+ FTCPVC ++P CGH+FC+ C+++ ++ +K Sbjct: 4 QQRDCGGAAQLAGPAAEADPLGRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPV 63 Query: 339 CPTCRKHL 362 C CR L Sbjct: 64 CGVCRSAL 71
>ZN313_PIG (Q6J1I8) Zinc finger protein 313| Length = 228 Score = 47.4 bits (111), Expect = 4e-05 Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Frame = +3 Query: 231 FTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKK-CPTCRKHL 362 FTCPVC ++P CGH+FC+ C+++ ++ +K C CR L Sbjct: 27 FTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPVCGVCRSTL 71
>TRI25_MOUSE (Q61510) Tripartite motif protein 25 (Zinc finger protein 147)| (Estrogen-responsive finger protein) (Efp) Length = 634 Score = 47.4 bits (111), Expect = 4e-05 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Frame = +3 Query: 207 KVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQ---KKCPTCRK 356 ++ P +C VC EP TT CGH FCT+C+ + Q +CP CRK Sbjct: 3 ELNPLAEELSCSVCLELFKEPVTTPCGHNFCTSCLDETWVVQGPPYRCPQCRK 55
>ZN313_BOVIN (Q4U5R4) Zinc finger protein 313| Length = 230 Score = 47.4 bits (111), Expect = 4e-05 Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Frame = +3 Query: 231 FTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKK-CPTCRKHL 362 FTCPVC ++P CGH+FC+ C+++ ++ +K C CR L Sbjct: 29 FTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPVCGVCRSAL 73
>NF7B_XENLA (Q92021) Nuclear factor 7, brain (xNF7) (xNF7-B)| Length = 609 Score = 47.0 bits (110), Expect = 5e-05 Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 4/109 (3%) Frame = +3 Query: 48 REGVTH--DDNATVLSHNTRNKRQRVAPVVNISPETGEGSSLQSKSAGKTSKEPVKVTPK 221 +EG T+ D T + +K + + PE + + ++ K A K + Sbjct: 81 KEGETNGTDQEVTDTAEQPDSKTPQKRKIEEPEPEPKK-AKVEEKDASKNASSLGAAGDF 139 Query: 222 EPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKK--CPTCRKHL 362 TCP+C +P CGH FC +CI +A + Q CP CR+ + Sbjct: 140 AEELTCPLCVELFKDPVMVACGHNFCRSCIDKAWEGQSSFACPECRESI 188
>BRE1_YEAST (Q07457) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-) (Brefeldin| A-sensitivity protein 1) Length = 700 Score = 47.0 bits (110), Expect = 5e-05 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQ-KKCPTCRKHLKMNNFHRIYL 392 C +C A CGH+FC NC K+ + + +KCPTC K N+ ++L Sbjct: 648 CSLCSKNWKNMAIKTCGHVFCENCCKERLAARMRKCPTCNKAFSSNDLLTVHL 700
>TRI12_MOUSE (Q99PQ1) Tripartite motif protein 12| Length = 284 Score = 47.0 bits (110), Expect = 5e-05 Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 6/53 (11%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIK---QAIQFQKK---CPTCRKHLKMNN 374 TCPVC N + +P + CGH FC CI ++I+ KK CP CR + +N Sbjct: 14 TCPVCLNLMVKPVSADCGHTFCQGCITLYFESIKCDKKVFICPVCRISYQFSN 66
>PZRN3_RAT (P68907) PDZ domain-containing RING finger protein 3 (Semaphorin| cytoplasmic domain-associated protein 3) (SEMACAP3 protein) Length = 1062 Score = 47.0 bits (110), Expect = 5e-05 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Frame = +3 Query: 222 EPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPT-CRKHLKMNNFHRI 386 +P C +C L++P TT CGH+FC C+ + + CP+ CR L + + Sbjct: 13 DPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPSRCRGRLSAKELNHV 68
>SMRA3_HUMAN (Q14527) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (DNA binding protein/plasminogen activator inhibitor 1 regulator) (Helicase-like tran Length = 1009 Score = 47.0 bits (110), Expect = 5e-05 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK---KCPTCRKHLKMNN 374 C +C + L P T C H+FC CI Q IQ ++ KCP CR + +N Sbjct: 760 CAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHEDN 808
>PZRN3_MOUSE (Q69ZS0) PDZ domain-containing RING finger protein 3 (Semaphorin| cytoplasmic domain-associated protein 3) (SEMACAP3 protein) Length = 1063 Score = 46.6 bits (109), Expect = 6e-05 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = +3 Query: 222 EPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPT-CRKHLKMNNFHRI 386 +P C +C L++P TT CGH+FC C+ + + CP CR L + + Sbjct: 13 DPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRLSAKELNHV 68
>AMFR2_HUMAN (Q9UKV5) Autocrine motility factor receptor, isoform 2 (EC 6.3.2.-)| (AMF receptor) (gp78) Length = 643 Score = 46.6 bits (109), Expect = 6e-05 Identities = 15/50 (30%), Positives = 28/50 (56%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKHLKMNNFHRI 386 C +CW+ + CGH+F +C++ ++ CPTCR L + + +R+ Sbjct: 341 CAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNRV 390
>SMRA3_RABIT (Q95216) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (RUSH-1) Length = 1005 Score = 46.6 bits (109), Expect = 6e-05 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK---KCPTCRKHLKMNN 374 C +C + L P T C H+FC CI Q IQ ++ KCP CR + +N Sbjct: 757 CAICLDSLTVPVITHCAHVFCKPCICQCIQNEQPHAKCPLCRNDIHGDN 805
>PZRN3_HUMAN (Q9UPQ7) PDZ domain-containing RING finger protein 3 (Ligand of| Numb-protein X 3) (Semaphorin cytoplasmic domain-associated protein 3) (SEMACAP3 protein) Length = 1066 Score = 46.6 bits (109), Expect = 6e-05 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = +3 Query: 222 EPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPT-CRKHLKMNNFHRI 386 +P C +C L++P TT CGH+FC C+ + + CP CR L + + Sbjct: 13 DPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRLSAKELNHV 68
>RAD18_KLULA (Q6CTZ8) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 427 Score = 46.6 bits (109), Expect = 6e-05 Identities = 19/62 (30%), Positives = 33/62 (53%) Frame = +3 Query: 207 KVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKHLKMNNFHRI 386 ++T + + C +C + L T CGH FC+ CI++ +Q + KCP C L + + Sbjct: 22 QLTDLDSLLRCHICKDFLKASVLTPCGHSFCSICIRKYLQKESKCPLCLSDLTESMLQKE 81 Query: 387 YL 392 +L Sbjct: 82 FL 83
>BRE1_CANAL (Q5A4X0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 681 Score = 46.2 bits (108), Expect = 8e-05 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Frame = +3 Query: 228 IFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQ-KKCPTCRKHLKMNNFHRIYL 392 I C VC + A T+CGH+FC+ C ++ + + ++CP+C + N+ I+L Sbjct: 626 IAKCSVCSKNWKDTAITVCGHVFCSKCTQERLAARLRRCPSCNRGFSANDLLSIHL 681
>RAD18_DEBHA (Q6BLM3) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 491 Score = 45.8 bits (107), Expect = 1e-04 Identities = 23/88 (26%), Positives = 41/88 (46%) Frame = +3 Query: 129 VNISPETGEGSSLQSKSAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNC 308 +N +P T ++ S + +K P + + + C +C L P T C H FC++C Sbjct: 1 MNSNPFTKNLQNVTDPSDWEPTKLP-NLKELDSLQRCYICKEFLKAPVITSCNHTFCSHC 59 Query: 309 IKQAIQFQKKCPTCRKHLKMNNFHRIYL 392 I++ + CP C+ +N R+ L Sbjct: 60 IREYLIVNSHCPLCKAEQFESNLKRVIL 87
>TRI26_PANTR (Q7YR34) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 539 Score = 45.8 bits (107), Expect = 1e-04 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNC---IKQAIQFQKKCPTCRKHLKMNNFHRIY 389 TC +C + L +P T CGH+FC +C ++ + CP C+K K N ++ Sbjct: 15 TCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENIRPVW 69
>TRI26_HUMAN (Q12899) Tripartite motif protein 26 (Zinc finger protein 173)| (Acid finger protein) (AFP) (RING finger protein 95) Length = 539 Score = 45.8 bits (107), Expect = 1e-04 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNC---IKQAIQFQKKCPTCRKHLKMNNFHRIY 389 TC +C + L +P T CGH+FC +C ++ + CP C+K K N ++ Sbjct: 15 TCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENIRPVW 69
>TRI26_RAT (P62603) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 542 Score = 45.8 bits (107), Expect = 1e-04 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNC---IKQAIQFQKKCPTCRKHLKMNNFHRIY 389 TC +C + L +P T CGH+FC +C I+ + CP C+K K N ++ Sbjct: 15 TCSICLDYLRDPVTIDCGHVFCRSCTSDIRPISGNRPVCPLCKKPFKKENIRPVW 69
>PEX10_PICAN (Q00940) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (Peroxisome assembly protein PER8) Length = 295 Score = 45.8 bits (107), Expect = 1e-04 Identities = 14/44 (31%), Positives = 28/44 (63%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKHLK 365 TC +C + + +P+ CGH+FC C+ ++ +++CP CR ++ Sbjct: 244 TCMLCLSPMKDPSCGECGHVFCWKCVLDWVKERQECPLCRAKMR 287
>TRI26_MOUSE (Q99PN3) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 45.8 bits (107), Expect = 1e-04 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNC---IKQAIQFQKKCPTCRKHLKMNNFHRIY 389 TC +C + L +P T CGH+FC +C I+ + CP C+K K N ++ Sbjct: 15 TCSICLDYLRDPVTIDCGHVFCRSCTSDIRPISGNRPVCPLCKKPFKKENIRPVW 69
>RO52_HUMAN (P19474) 52 kDa Ro protein (Sjoegren syndrome type A antigen)| (SS-A) (Ro(SS-A)) (52 kDa ribonucleoprotein autoantigen Ro/SS-A) (Tripartite motif protein 21) (RING finger protein 81) Length = 475 Score = 45.4 bits (106), Expect = 1e-04 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQ-FQKKCPTCRKHLKMNN 374 TCP+C + EP + CGH FC CI Q + CP CR+ + N Sbjct: 15 TCPICLDPFVEPVSIECGHSFCQECISQVGKGGGSVCPVCRQRFLLKN 62
>BRCA1_RAT (O54952) Breast cancer type 1 susceptibility protein homolog| Length = 1817 Score = 45.4 bits (106), Expect = 1e-04 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = +3 Query: 222 EPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK---KCPTCRKHL 362 + I CP+C + EP +T C HIFC C+ + + +K +CP C+ + Sbjct: 19 QKILECPICLELIKEPVSTQCDHIFCKFCMLKLLNQKKGPSQCPLCKNEI 68
>RING1_DROME (Q9VB08) Ubiquitin ligase protein RING1 (EC 6.3.2.-) (dRING1)| (dRING protein) (Sex comb extra protein) Length = 435 Score = 45.1 bits (105), Expect = 2e-04 Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 4/62 (6%) Frame = +3 Query: 189 TSKEPVKVTPKE--PIFTCPVCWNKLDEPATTM-CGHIFCTNCIKQAIQF-QKKCPTCRK 356 T + V+P+ CP+C + L + TT C H FC++CI A++ K+CPTCRK Sbjct: 28 TDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRK 87 Query: 357 HL 362 L Sbjct: 88 KL 89
>BRCA1_PONPY (Q6J6J0) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 45.1 bits (105), Expect = 2e-04 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Frame = +3 Query: 210 VTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK---KCPTCRKHL 362 + + I CP+C + EP +T C HIFC C+ + + +K +CP C+ + Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI 68
>BRCA1_PANTR (Q9GKK8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 45.1 bits (105), Expect = 2e-04 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Frame = +3 Query: 210 VTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK---KCPTCRKHL 362 + + I CP+C + EP +T C HIFC C+ + + +K +CP C+ + Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI 68
>BRCA1_MOUSE (P48754) Breast cancer type 1 susceptibility protein homolog| Length = 1812 Score = 45.1 bits (105), Expect = 2e-04 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = +3 Query: 222 EPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK---KCPTCRKHL 362 + I CP+C + EP +T C HIFC C+ + + +K +CP C+ + Sbjct: 19 QKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEI 68
>BRCA1_MACMU (Q6J6I9) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 45.1 bits (105), Expect = 2e-04 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Frame = +3 Query: 210 VTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK---KCPTCRKHL 362 + + I CP+C + EP +T C HIFC C+ + + +K +CP C+ + Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCRFCMLKLLNQKKGPSQCPLCKNDI 68
>BRCA1_HUMAN (P38398) Breast cancer type 1 susceptibility protein (RING finger| protein 53) Length = 1863 Score = 45.1 bits (105), Expect = 2e-04 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Frame = +3 Query: 210 VTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK---KCPTCRKHL 362 + + I CP+C + EP +T C HIFC C+ + + +K +CP C+ + Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI 68
>BRCA1_GORGO (Q6J6I8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 45.1 bits (105), Expect = 2e-04 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Frame = +3 Query: 210 VTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK---KCPTCRKHL 362 + + I CP+C + EP +T C HIFC C+ + + +K +CP C+ + Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI 68
>BRCA1_CANFA (Q95153) Breast cancer type 1 susceptibility protein homolog| Length = 1878 Score = 45.1 bits (105), Expect = 2e-04 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Frame = +3 Query: 177 SAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK---KCPT 347 SA + + + + I CP+C + EP +T C HIFC C+ + + +K +CP Sbjct: 4 SADRVEEVQNVLNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQRKGPSQCPL 63 Query: 348 CRKHL 362 C+ + Sbjct: 64 CKNDI 68
>PZRN4_HUMAN (Q6ZMN7) PDZ domain-containing RING finger protein 4 (Ligand of| Numb-protein X 4) (SEMACAP3-like protein) Length = 1036 Score = 45.1 bits (105), Expect = 2e-04 Identities = 17/55 (30%), Positives = 29/55 (52%) Frame = +3 Query: 222 EPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKHLKMNNFHRI 386 +P C +C L+EP T CGH+FC +C+ +++CP + L +R+ Sbjct: 13 DPALECKLCGQVLEEPLCTPCGHVFCASCLLPWAVRRRRCPLQCQPLAPGELYRV 67
>SMRA3_MOUSE (Q6PCN7) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (TNF-response element-binding protein) (P113) Length = 1003 Score = 45.1 bits (105), Expect = 2e-04 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 3/49 (6%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK---KCPTCRKHLKMNN 374 C +C + L P T C H+FC CI Q I ++ KCP CR + +N Sbjct: 754 CAICLDSLTFPVITHCAHVFCKPCICQVIHSEQPHAKCPLCRNEIHGDN 802
>RN113_CAEEL (O17917) Putative RING finger protein 113 homolog| Length = 384 Score = 45.1 bits (105), Expect = 2e-04 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKH 359 C +C N +P T C H FCT C ++ Q KCP C+++ Sbjct: 241 CFICGNPFVDPIVTKCKHYFCTGCALKSFQKSSKCPICQQN 281
>BRE1_CANGA (Q6FWF3) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 693 Score = 45.1 bits (105), Expect = 2e-04 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQ-KKCPTCRKHLKMNNFHRIYL 392 C +C A CGH+FC +C K+ + + +KCPTC K N+ ++L Sbjct: 641 CSLCSKNWKNMAIRTCGHVFCEDCCKERLAARMRKCPTCNKPFSSNDLLMVHL 693
>BRE1_KLULA (Q6CWM4) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 663 Score = 45.1 bits (105), Expect = 2e-04 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = +3 Query: 228 IFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQ-KKCPTCRKHLKMNNFHRIYL 392 I C +C A CGH+FC C K+ + + +KCPTC K N+ I+L Sbjct: 608 IIYCSLCSKNWKNTALKTCGHVFCDVCCKERLAARMRKCPTCNKPFSSNDLLSIHL 663
>BRCA1_BOVIN (Q864U1) Breast cancer type 1 susceptibility protein homolog| Length = 1849 Score = 44.7 bits (104), Expect = 2e-04 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = +3 Query: 222 EPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK---KCPTCRKHL 362 + I CP+C + EP +T C HIFC C+ + + +K +CP C+ + Sbjct: 19 QKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI 68
>AMFR_MOUSE (Q9R049) Autocrine motility factor receptor (EC 6.3.2.19) (AMF| receptor) Length = 643 Score = 44.7 bits (104), Expect = 2e-04 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKHLKM 368 C +CW+ + CGH+F +C++ ++ CPTCR L + Sbjct: 341 CAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNI 384
>TRI40_PANTR (Q1XHT8) Tripartite motif 40 protein| Length = 229 Score = 44.7 bits (104), Expect = 2e-04 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 5/45 (11%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKK-----CPTCRK 356 CP+C L E +T CGH+FC C+ Q ++ CP CRK Sbjct: 14 CPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRK 58
>RING1_RAT (Q6MGB6) Polycomb complex protein RING1 (RING finger protein 1)| Length = 406 Score = 44.3 bits (103), Expect = 3e-04 Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%) Frame = +3 Query: 237 CPVCWNKLDEPATTM-CGHIFCTNCIKQAIQF-QKKCPTCRKHL 362 CP+C + L TT C H FC++CI A++ K+CPTCRK L Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 91
>RING1_MOUSE (O35730) Polycomb complex protein RING1 (RING finger protein 1)| (Transcription repressor Ring1A) Length = 406 Score = 44.3 bits (103), Expect = 3e-04 Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%) Frame = +3 Query: 237 CPVCWNKLDEPATTM-CGHIFCTNCIKQAIQF-QKKCPTCRKHL 362 CP+C + L TT C H FC++CI A++ K+CPTCRK L Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 91
>RING1_HUMAN (Q06587) Polycomb complex protein RING1 (RING finger protein 1)| Length = 406 Score = 44.3 bits (103), Expect = 3e-04 Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%) Frame = +3 Query: 237 CPVCWNKLDEPATTM-CGHIFCTNCIKQAIQF-QKKCPTCRKHL 362 CP+C + L TT C H FC++CI A++ K+CPTCRK L Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 91
>RING1_CANFA (Q5TJF3) Ubiquitin ligase protein RING1 (EC 6.3.2.-) (RING finger| protein 1) (RING1a) Length = 406 Score = 44.3 bits (103), Expect = 3e-04 Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%) Frame = +3 Query: 237 CPVCWNKLDEPATTM-CGHIFCTNCIKQAIQF-QKKCPTCRKHL 362 CP+C + L TT C H FC++CI A++ K+CPTCRK L Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 91
>SM3L1_ARATH (Q9FF61) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 1 (EC 3.6.1.-) (SMARCA3-like protein 1) Length = 881 Score = 44.3 bits (103), Expect = 3e-04 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = +3 Query: 231 FTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKK-CPTCRKHLKMNNFH 380 F CP+C + T C HIFC CI Q +Q K CP CR L ++ + Sbjct: 633 FDCPICISPPTNIIITRCAHIFCRACILQTLQRSKPLCPLCRGSLTQSDLY 683
>BRE1_ASHGO (Q757D9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 643 Score = 44.3 bits (103), Expect = 3e-04 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQ-KKCPTCRKHLKMNNFHRIYL 392 C +C + CGH+FC +C K+ + + +KCPTC K N+ ++L Sbjct: 591 CSLCSKNWKDTVIKTCGHVFCADCCKERLAARMRKCPTCNKGFSSNDLLVVHL 643
>TRI40_HUMAN (Q6P9F5) Tripartite motif 40 protein (RING finger protein 35)| Length = 258 Score = 44.3 bits (103), Expect = 3e-04 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 6/46 (13%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKK------CPTCRK 356 CP+C L E +T CGH+FC C+ Q ++ CP CRK Sbjct: 14 CPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCCPLCRK 59
>YEU6_YEAST (P40072) Hypothetical 30.8 kDa protein in SPR6-RPL23B intergenic| region Length = 274 Score = 44.3 bits (103), Expect = 3e-04 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 3/85 (3%) Frame = +3 Query: 96 TRNKRQRV---APVVNISPETGEGSSLQSKSAGKTSKEPVKVTPKEPIFTCPVCWNKLDE 266 T +K Q V A +++ E + + + +KE K + CP+C+ + Sbjct: 156 TNSKEQTVDLTADAIDLDAEEQQVLQISDDDFQEETKEAPKEYGAAKDYRCPICFEPPET 215 Query: 267 PATTMCGHIFCTNCIKQAIQFQKKC 341 T+CGH+FC C+ Q + + C Sbjct: 216 ALMTLCGHVFCCPCLFQMVNSSRTC 240
>RING1_MACMU (Q8WMN5) Polycomb complex protein RING1 (RING finger protein 1)| Length = 377 Score = 44.3 bits (103), Expect = 3e-04 Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%) Frame = +3 Query: 237 CPVCWNKLDEPATTM-CGHIFCTNCIKQAIQF-QKKCPTCRKHL 362 CP+C + L TT C H FC++CI A++ K+CPTCRK L Sbjct: 19 CPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 62
>PEX10_YEAST (Q05568) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 337 Score = 44.3 bits (103), Expect = 3e-04 Identities = 14/41 (34%), Positives = 25/41 (60%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKH 359 C +C + +P+ CGH+FC +C+ + + +CP CR+H Sbjct: 286 CILCLMNMSDPSCAPCGHLFCWSCLMSWCKERPECPLCRQH 326
>TRI31_HUMAN (Q9BZY9) Tripartite motif protein 31| Length = 425 Score = 44.3 bits (103), Expect = 3e-04 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQ---KKCPTCRKHLKMN 371 CP+C + L +P T CGH FC CI Q + KCP C+ ++ N Sbjct: 16 CPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKN 63
>RNG2A_XENLA (Q66J69) Ubiquitin ligase protein RING2-A (EC 6.3.2.-) (RING finger| protein 2-A) (RING finger protein 1B-A) (RING1b-A) Length = 344 Score = 44.3 bits (103), Expect = 3e-04 Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%) Frame = +3 Query: 237 CPVCWNKLDEPATTM-CGHIFCTNCIKQAIQF-QKKCPTCRKHL 362 CP+C + L TT C H FC++CI A++ K+CPTCRK L Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 91
>RNG2B_XENLA (Q7ZWM8) Ubiquitin ligase protein RING2-B (EC 6.3.2.-) (RING finger| protein 2-B) (RING finger protein 1B-B) (RING1b-B) Length = 343 Score = 44.3 bits (103), Expect = 3e-04 Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%) Frame = +3 Query: 237 CPVCWNKLDEPATTM-CGHIFCTNCIKQAIQF-QKKCPTCRKHL 362 CP+C + L TT C H FC++CI A++ K+CPTCRK L Sbjct: 47 CPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 90
>TRIM6_HUMAN (Q9C030) Tripartite motif protein 6 (RING finger protein 89)| Length = 488 Score = 43.9 bits (102), Expect = 4e-04 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 7/65 (10%) Frame = +3 Query: 201 PVKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCI----KQAI---QFQKKCPTCRKH 359 PV V +E + TCP+C L EP + CGH FC CI ++++ + ++ CP C+ Sbjct: 4 PVLVDIREEV-TCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTS 62 Query: 360 LKMNN 374 + N Sbjct: 63 YQPGN 67
>RFP2_MOUSE (Q9CYB0) Ret finger protein 2 (Putative tumor suppressor RFP2)| (Tripartite motif-containing protein 13) Length = 407 Score = 43.9 bits (102), Expect = 4e-04 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 10/55 (18%) Frame = +3 Query: 222 EPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK----------KCPTCRK 356 E TCP+C + D+P C H FC C++ ++ KCPTCRK Sbjct: 5 EEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGLLEGNVRNSLWRPSPFKCPTCRK 59
>RFP2_HUMAN (O60858) Ret finger protein 2 (Leukemia-associated protein 5)| (B-cell chronic lymphocytic leukemia tumor suppressor Leu5) (Putative tumor suppressor RFP2) (Tripartite motif protein 13) (RING finger protein 77) Length = 407 Score = 43.9 bits (102), Expect = 4e-04 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 10/55 (18%) Frame = +3 Query: 222 EPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK----------KCPTCRK 356 E TCP+C + D+P C H FC C++ ++ KCPTCRK Sbjct: 5 EEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRK 59
>DTX3_MOUSE (Q80V91) Protein deltex-3 (Deltex-3) (Deltex3) (mDTX3)| Length = 347 Score = 43.9 bits (102), Expect = 4e-04 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = +3 Query: 234 TCPVCWNKLDEPATT-MCGHIFCTNCIKQAIQFQKKCPTC 350 TCP+C ++ T C H FC CI +A+Q +K CP C Sbjct: 163 TCPICLGEIQNAKTLEKCRHSFCEGCITRALQVKKACPMC 202
>DTX3_HUMAN (Q8N9I9) Protein deltex-3 (Deltex-3) (Deltex3)| Length = 347 Score = 43.9 bits (102), Expect = 4e-04 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = +3 Query: 234 TCPVCWNKLDEPATT-MCGHIFCTNCIKQAIQFQKKCPTC 350 TCP+C ++ T C H FC CI +A+Q +K CP C Sbjct: 163 TCPICLGEIQNAKTLEKCRHSFCEGCITRALQVKKACPMC 202
>YB1B_SCHPO (P87176) Hypothetical RING finger protein C3D6.11c in chromosome II| Length = 269 Score = 43.5 bits (101), Expect = 5e-04 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 6/82 (7%) Frame = +3 Query: 144 ETGEGSSLQSKSAGKTSKEPVKVTPKEPI---FTCPVCWNKLDEPATTMCGHIFCTNCIK 314 E G+ S + K +V P + C +C + + + T CGHIFC CI Sbjct: 172 EQGKNPSTTNAEIEKEEPSKKQVVPSSQRLADYKCVICLDSPENLSCTPCGHIFCNFCIL 231 Query: 315 QAI---QFQKKCPTCRKHLKMN 371 A+ +KCP CR+ + N Sbjct: 232 SALGTTAATQKCPVCRRKVHPN 253
>RING2_RAT (Q4KLY4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 308 Score = 43.5 bits (101), Expect = 5e-04 Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 2/44 (4%) Frame = +3 Query: 237 CPVCWNKLDEPATTM-CGHIFCTNCIKQAIQF-QKKCPTCRKHL 362 CP+C + L TT C H FC +CI A++ K+CPTCRK L Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKL 94
>BRE1_YARLI (Q6CF78) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 700 Score = 43.5 bits (101), Expect = 5e-04 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%) Frame = +3 Query: 165 LQSKSAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQ-KKC 341 ++ S G +S E + I C +C + A +CGH+FC C + + + +KC Sbjct: 627 IELSSFGGSSDE---IDELRSIAMCSLCSKNWKDTALKVCGHVFCHQCAQDRLDARLRKC 683 Query: 342 PTCRKHLKMNNFHRIYL 392 P C K N+ ++L Sbjct: 684 PNCNKPFSQNDLLTVHL 700
>NF7O_XENLA (Q91431) Nuclear factor 7, ovary (xNF7-O)| Length = 610 Score = 43.5 bits (101), Expect = 5e-04 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Frame = +3 Query: 159 SSLQSKSAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKK 338 + ++ K A KT+ TCP+C +P CGH FC +CI + + Q Sbjct: 120 AKVEDKDASKTAASLGAAGDFAEELTCPLCVELFKDPVMVACGHNFCRSCIDKVWEGQSS 179 Query: 339 --CPTCRKHL 362 CP C++ + Sbjct: 180 FACPECKESI 189
>RING2_PONPY (Q5R9J5) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 43.5 bits (101), Expect = 5e-04 Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 2/44 (4%) Frame = +3 Query: 237 CPVCWNKLDEPATTM-CGHIFCTNCIKQAIQF-QKKCPTCRKHL 362 CP+C + L TT C H FC +CI A++ K+CPTCRK L Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKL 94
>RING2_MOUSE (Q9CQJ4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 43.5 bits (101), Expect = 5e-04 Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 2/44 (4%) Frame = +3 Query: 237 CPVCWNKLDEPATTM-CGHIFCTNCIKQAIQF-QKKCPTCRKHL 362 CP+C + L TT C H FC +CI A++ K+CPTCRK L Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKL 94
>RING2_HUMAN (Q99496) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) (RING finger protein BAP-1) (DinG protein) (Huntingtin-interacting protein 2-interacting protein 3) (HIP2-interacting protein 3) Length = 336 Score = 43.5 bits (101), Expect = 5e-04 Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 2/44 (4%) Frame = +3 Query: 237 CPVCWNKLDEPATTM-CGHIFCTNCIKQAIQF-QKKCPTCRKHL 362 CP+C + L TT C H FC +CI A++ K+CPTCRK L Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKL 94
>RING2_BRARE (Q803I4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 43.5 bits (101), Expect = 5e-04 Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 2/44 (4%) Frame = +3 Query: 237 CPVCWNKLDEPATTM-CGHIFCTNCIKQAIQF-QKKCPTCRKHL 362 CP+C + L TT C H FC +CI A++ K+CPTCRK L Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKL 94
>PEX10_SCHPO (Q9UUF0) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 306 Score = 43.5 bits (101), Expect = 5e-04 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCR 353 C +C + PA T CGHIFC +CI + +CP CR Sbjct: 256 CSLCMEFIHCPAATECGHIFCWSCINGWTSKKSECPLCR 294
>TRI22_HUMAN (Q8IYM9) Tripartite motif protein 22 (RING finger protein 94) (50| kDa-stimulated trans-acting factor) (Staf-50) Length = 498 Score = 43.5 bits (101), Expect = 5e-04 Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 7/99 (7%) Frame = +3 Query: 204 VKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAI-------QFQKKCPTCRKHL 362 VKV ++ + TCP+C L EP + CGH FC CI I + + CP C+ Sbjct: 5 VKVDIEKEV-TCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRF 63 Query: 363 KMNNFHRIYLPNTAR*GVLPGRTMVDLLLRSIVVPSSPR 479 + N P R + +++ R V SP+ Sbjct: 64 QPGNLR-------------PNRHLANIVERVKEVKMSPQ 89
>RAD18_CANAL (Q5A4N5) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 378 Score = 43.1 bits (100), Expect = 7e-04 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +3 Query: 186 KTSKEPVKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCR 353 KT+K P + + + C +C + L+ P T C H +C+ CI++ + +CP C+ Sbjct: 13 KTTKLPA-LAELDILKRCYICKDLLNAPVRTQCDHTYCSQCIREFLLRDNRCPLCK 67
>TRI50_RAT (Q810I1) Tripartite motif protein 50| Length = 483 Score = 43.1 bits (100), Expect = 7e-04 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNC---IKQAIQFQKKCPTCRK 356 CP+C EP CGH +C NC + + + + +CP CR+ Sbjct: 16 CPICLEVFKEPLMLQCGHSYCKNCLDSLSEHLDSELRCPVCRQ 58
>RAD18_YEAST (P10862) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) (Radiation sensitivity protein 18) Length = 487 Score = 43.1 bits (100), Expect = 7e-04 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +3 Query: 222 EPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTC 350 + + C +C + L P T CGH FC+ CI+ + Q CP C Sbjct: 23 DTLLRCHICKDFLKVPVLTPCGHTFCSLCIRTHLNNQPNCPLC 65
>BRE1_GIBZE (Q4I7N9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 703 Score = 43.1 bits (100), Expect = 7e-04 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQ-KKCPTCRK 356 C +C N A CGH+FC C+ I + +KCPTC + Sbjct: 651 CTICRNNFKNTALKTCGHLFCNQCVDDRISNRMRKCPTCSR 691
>LNX2_MOUSE (Q91XL2) Ligand of Numb-protein X 2 (Numb-binding protein 2)| Length = 687 Score = 42.7 bits (99), Expect = 9e-04 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKHL 362 C +C L +P T CGH FC C++ +Q + CP RK L Sbjct: 51 CHICLQPLLQPLDTPCGHTFCHKCLRNFLQEKDFCPLDRKRL 92
>LNX2_HUMAN (Q8N448) Ligand of Numb-protein X 2 (Numb-binding protein 2) (PDZ| domain-containing RING finger protein 1) Length = 690 Score = 42.7 bits (99), Expect = 9e-04 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKHL 362 C +C L +P T CGH FC C++ +Q + CP RK L Sbjct: 50 CHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCPLDRKRL 91
>TRI50_PIG (Q865W2) Tripartite motif protein 50| Length = 486 Score = 42.7 bits (99), Expect = 9e-04 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Frame = +3 Query: 204 VKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNC---IKQAIQFQKKCPTCRKHL 362 V V E CPVC EP CGH +C C + + + + +CP CR+ + Sbjct: 5 VSVPELEDRLQCPVCLEVFKEPLMLQCGHSYCKGCLLSLSRHLDSELRCPVCRQEV 60
>TRI26_PIG (O77666) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 42.7 bits (99), Expect = 9e-04 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNC---IKQAIQFQKKCPTCRKHLKMNNFHRIY 389 TC +C + L +P T CGH+FC +C I + CP C+K N ++ Sbjct: 15 TCSICLDYLRDPVTIDCGHVFCRSCTTDIHPVSGGRPVCPLCKKPFTKENIRPVW 69
>A33_PLEWA (Q02084) Zinc-binding protein A33| Length = 624 Score = 42.7 bits (99), Expect = 9e-04 Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 17/127 (13%) Frame = +3 Query: 33 EAHVTREGVTHDDNATVLSHNTRNKRQRVAPVVNISPETGEGSSLQSKS-AGKTSKEPV- 206 E +V G+ N V +Q +N + + G S QS+ A +++K + Sbjct: 79 EFYVHYVGLNRRQNEWVDKSRVLQAKQIKTEELNNTEDETNGVSDQSEGKAARSNKRKIE 138 Query: 207 ---------KVTPKEPIFT----CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK--KC 341 KV +E FT CP+C + EP CGH FC +CI ++ + C Sbjct: 139 DGDGDQKKRKVDDEEDDFTEDLTCPLCRSLFKEPVILECGHNFCKHCIDKSWESASAFSC 198 Query: 342 PTCRKHL 362 P C++ L Sbjct: 199 PECKEVL 205
>RNF5_CAEEL (Q09463) RING finger protein 5| Length = 235 Score = 42.4 bits (98), Expect = 0.001 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 5/71 (7%) Frame = +3 Query: 192 SKEPVKVTPKEPI--FTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQ---KKCPTCRK 356 S+EP + K+ F C +C + + ++CGH+FC C+ Q + + + CP C+ Sbjct: 9 SEEPTSSSNKDESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKS 68 Query: 357 HLKMNNFHRIY 389 + N IY Sbjct: 69 AIDGNKVVPIY 79
>TRI25_HUMAN (Q14258) Tripartite motif protein 25 (Zinc finger protein 147)| (Estrogen-responsive finger protein) (Efp) (RING finger protein 147) Length = 630 Score = 42.4 bits (98), Expect = 0.001 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Frame = +3 Query: 207 KVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKK---CPTCR 353 ++ P +C +C EP TT CGH FC +C+ + Q CP CR Sbjct: 3 ELCPLAEELSCSICLEPFKEPVTTPCGHNFCGSCLNETWAVQGSPYLCPQCR 54
>CWC24_KLULA (Q6CSS6) Pre-mRNA-splicing factor CWC24| Length = 229 Score = 42.4 bits (98), Expect = 0.001 Identities = 18/54 (33%), Positives = 27/54 (50%) Frame = +3 Query: 195 KEPVKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRK 356 KE +K + P F C +C + P T C H FC++C + ++ CP C K Sbjct: 158 KEVLKELEEIP-FRCFLCKKEYTSPVVTKCNHYFCSSCFMKQMKVSTNCPICGK 210
>CWC24_CANGA (Q6FXX1) Pre-mRNA-splicing factor CWC24| Length = 226 Score = 42.4 bits (98), Expect = 0.001 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Frame = +3 Query: 198 EPVKVTPKEPI-FTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTC 350 E + T KE + F C +C + P T CGH FC C I+ K C C Sbjct: 151 EQKEETRKEAVPFKCVLCKESYERPVKTNCGHYFCQKCFVNRIKIDKSCFIC 202
>TRI43_HUMAN (Q96BQ3) Tripartite motif protein 43| Length = 446 Score = 42.4 bits (98), Expect = 0.001 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 3/44 (6%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCI---KQAIQFQKKCPTCRK 356 TC +C N L +P T CGH FC C+ + Q CP CR+ Sbjct: 14 TCVICLNYLVDPVTICCGHSFCRPCLCLSWEEAQSPANCPACRE 57
>RAG1_BRARE (O13033) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1057 Score = 42.4 bits (98), Expect = 0.001 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNC-IKQAIQFQKKCPTCRKHL 362 TC VC + L +P + C H+FC C I+ CPTC +HL Sbjct: 295 TCQVCDHLLSDPVQSPCRHLFCRLCIIRYTHALGPNCPTCNQHL 338
>RNF8_HUMAN (O76064) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) Length = 485 Score = 42.0 bits (97), Expect = 0.001 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKHLKMNNF 377 C +C E T C H FC+ CI + ++ + +CP CRK +K + Sbjct: 403 CIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIECPICRKDIKSKTY 449
>CWC24_CRYNE (Q5KB05) Pre-mRNA-splicing factor CWC24| Length = 329 Score = 42.0 bits (97), Expect = 0.001 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = +3 Query: 219 KEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTC 350 +E F C +C +P T CGH FC C + Q KC C Sbjct: 231 EEVPFACLICRQPFTQPVVTKCGHYFCMGCAAKRFQKSPKCYAC 274
>BFAR_RAT (Q5PQN2) Bifunctional apoptosis regulator| Length = 450 Score = 42.0 bits (97), Expect = 0.001 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Frame = +3 Query: 231 FTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKK--CPTCRK 356 F+C C++ L P T CGH FC +C+ KK CP CR+ Sbjct: 32 FSCHCCYDTLVNPTTLNCGHSFCRHCLALWWMSSKKTECPECRE 75
>BFAR_MOUSE (Q8R079) Bifunctional apoptosis regulator| Length = 450 Score = 42.0 bits (97), Expect = 0.001 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Frame = +3 Query: 231 FTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKK--CPTCRK 356 F+C C++ L P T CGH FC +C+ KK CP CR+ Sbjct: 32 FSCHCCYDTLVNPTTLNCGHSFCRHCLALWWMSSKKTECPECRE 75
>BFAR_HUMAN (Q9NZS9) Bifunctional apoptosis regulator (RING finger protein 47)| Length = 450 Score = 42.0 bits (97), Expect = 0.001 Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 5/58 (8%) Frame = +3 Query: 198 EPVKVT-PKEPI--FTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKK--CPTCRK 356 EP+K T P+ + F+C C++ L P T CGH FC +C+ KK CP CR+ Sbjct: 18 EPLKSTGPQISVSEFSCHCCYDILVNPTTLNCGHSFCRHCLALWWASSKKTECPECRE 75
>CWC24_SCHPO (Q9P6R8) Pre-mRNA-splicing factor cwc24 (Complexed with cdc5| protein 24) (Cell cycle control protein cwf24) Length = 533 Score = 42.0 bits (97), Expect = 0.001 Identities = 24/60 (40%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = +3 Query: 174 KSAGKTSKEPVKVTPKEPI-FTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTC 350 K K + VK KE I F C +C P T CGH FC C AI +K PTC Sbjct: 232 KKGAKLEEGMVKNEKKEDIPFVCLICKKDYRSPIATTCGHHFCEQC---AITRYRKTPTC 288
>PEX10_MACFA (Q8HXW8) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 326 Score = 42.0 bits (97), Expect = 0.001 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRK 356 C +C + P T CGH+FC CI + +CP CR+ Sbjct: 273 CTLCLEERRHPTATPCGHLFCWECITAWCSSKAECPLCRE 312
>PEX10_HUMAN (O60683) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (RING finger protein 69) Length = 326 Score = 42.0 bits (97), Expect = 0.001 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRK 356 C +C + P T CGH+FC CI + +CP CR+ Sbjct: 273 CTLCLEERRHPTATPCGHLFCWECITAWCSSKAECPLCRE 312
>TRAF3_MOUSE (Q60803) TNF receptor-associated factor 3 (CD40 receptor-associated| factor 1) (CRAF1) (TRAFAMN) Length = 567 Score = 42.0 bits (97), Expect = 0.001 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 1/81 (1%) Frame = +3 Query: 123 PVVNISPETGEGSSLQSKSAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCT 302 P + + P+ G GS L + G K V K + C C L P T CGH FC Sbjct: 17 PPLKLQPDRGAGSVLVPEQGGYKEKFVKTVEDK---YKCEKCRLVLCNPKQTECGHRFCE 73 Query: 303 NCIKQAIQFQK-KCPTCRKHL 362 +C+ + KC C++ + Sbjct: 74 SCMAALLSSSSPKCTACQESI 94
>TRI10_MOUSE (Q9WUH5) Tripartite motif protein 10 (RING finger protein 9)| (Hematopoietic RING finger 1) Length = 489 Score = 41.6 bits (96), Expect = 0.002 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 7/54 (12%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQF-------QKKCPTCRKHLKMNNF 377 CP+C L EP T CGH FC C+ + + CP C++ + +F Sbjct: 16 CPICQGTLREPVTIDCGHNFCRGCLTRYCEIPGPESEESLSCPLCKEPFRPGSF 69
>RAG1_MOUSE (P15919) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1040 Score = 41.6 bits (96), Expect = 0.002 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 2/94 (2%) Frame = +3 Query: 78 TVLSHNTRNKRQRVAPVVNISPETGEGSSLQSKSAGKTSKEPVKVTPK-EPIFTCPVCWN 254 TVL+H R++R+R V+ S E + S SK T V +C +C + Sbjct: 237 TVLNHARRDRRKRTQARVS-SKEVLKKISNCSKIHLSTKLLAVDFPAHFVKSISCQICEH 295 Query: 255 KLDEPATTMCGHIFCTNCIKQAIQFQ-KKCPTCR 353 L +P T C H+FC CI + ++ CP+CR Sbjct: 296 ILADPVETSCKHLFCRICILRCLKVMGSYCPSCR 329
>RAD5_YEAST (P32849) DNA repair protein RAD5 (EC 3.6.1.-) (Radiation sensitivity| protein 5) (Revertibility protein 2) Length = 1169 Score = 41.6 bits (96), Expect = 0.002 Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 9/116 (7%) Frame = +3 Query: 42 VTREGVTHDDNATVLSH---NTRNKRQRVAPVVNISPETGEGSSLQSKSAGKTSKEPVKV 212 VT + V D V+S N+ +K + A + + + + S QS + EP+ Sbjct: 865 VTEQTVELDSLMRVVSERFDNSFSKEELDAMIQRLKVKYPDNKSFQSLECSICTTEPMD- 923 Query: 213 TPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK------KCPTCRKHL 362 LD+ T CGH FC C+ + I+FQ KCP CR + Sbjct: 924 ---------------LDKALFTECGHSFCEKCLFEYIEFQNSKNLGLKCPNCRNQI 964
>RAD5_DEBHA (Q6BIP2) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1153 Score = 41.6 bits (96), Expect = 0.002 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 9/49 (18%) Frame = +3 Query: 237 CPVCWNK---LDEPATTMCGHIFCTNCIKQAIQFQKK------CPTCRK 356 C +C L E A T CGH +C NC+ + FQ+K CP CR+ Sbjct: 916 CSICTQSPIPLGEMALTPCGHAYCLNCVLEHFDFQEKNLQKPLCPNCRE 964
>TRI40_RAT (Q6MFY8) Tripartite motif protein 40 (RING finger protein 35)| Length = 247 Score = 41.6 bits (96), Expect = 0.002 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 5/45 (11%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCI-----KQAIQFQKKCPTCRK 356 CP+C + L E +T C H+FC C+ K ++ CP CRK Sbjct: 12 CPICLDPLKEAVSTDCRHLFCRMCLIRHMDKASVSGVLSCPVCRK 56
>NHL1_CAEEL (Q03601) RING finger protein nhl-1| Length = 974 Score = 41.6 bits (96), Expect = 0.002 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%) Frame = +3 Query: 222 EPIFTCPVCWNKLDEPATTMCGHIFCTNCIK---QAIQFQKKCPTCR 353 E + TCP+C ++ +P C H FC C++ + KCP CR Sbjct: 38 EQLLTCPICLDRYKQPKLLPCQHTFCYPCLESCADTLHRNLKCPECR 84
>CWC24_YEAST (P53769) Pre-mRNA-splicing factor CWC24 (Complexed with CEF1| protein 24) Length = 259 Score = 41.2 bits (95), Expect = 0.003 Identities = 19/63 (30%), Positives = 29/63 (46%) Frame = +3 Query: 168 QSKSAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPT 347 Q +A K + V + ++ F C +C P T CGH FC +C + ++ KC Sbjct: 176 QEWNADKEDSKAVTLDLEKIPFKCTLCKEDYKSPVVTNCGHYFCGSCFAKDMKKGTKCFI 235 Query: 348 CRK 356 C K Sbjct: 236 CHK 238
>RO52_MOUSE (Q62191) 52 kDa Ro protein (Sjoegren syndrome type A antigen)| (SS-A) (Ro(SS-A)) (52 kDa ribonucleoprotein autoantigen Ro/SS-A) (Tripartite motif protein 21) Length = 470 Score = 41.2 bits (95), Expect = 0.003 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCI-KQAIQFQKKCPTCRKHLKMNN 374 TC +C + + EP + CGH FC CI + CP CR+ + N Sbjct: 19 TCSICLDPMVEPMSIECGHCFCKECIFEVGKNGGSSCPECRQQFLLRN 66
>TRI48_HUMAN (Q8IWZ4) Tripartite motif protein 48 (RING finger protein 101)| Length = 375 Score = 41.2 bits (95), Expect = 0.003 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIK---QAIQFQKKCPTCRKHLKMNN 374 TCP+C N +P T CGH FC C Q I +C C K ++ N Sbjct: 14 TCPICMNYFIDPVTIDCGHSFCRPCFYLNWQDIPILTQCFECIKTIQQRN 63
>TRI10_PIG (O19085) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 482 Score = 41.2 bits (95), Expect = 0.003 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 7/54 (12%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQ-------KKCPTCRKHLKMNNF 377 CP+C L EP T CGH FC C+ + ++ CP C++ + +F Sbjct: 16 CPICQGTLREPVTIDCGHNFCCVCLTRYLEIPCLDPGELPTCPLCKEPFRPGSF 69
>RN146_RAT (Q5XIK5) RING finger protein 146| Length = 352 Score = 41.2 bits (95), Expect = 0.003 Identities = 17/59 (28%), Positives = 26/59 (44%) Frame = +3 Query: 186 KTSKEPVKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKHL 362 K S+ P + C +C P + C H+FC C+K A K+C CR+ + Sbjct: 19 KASETCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWLGKRCALCRQEI 77
>TRI10_PANTR (Q7YR32) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 481 Score = 40.8 bits (94), Expect = 0.003 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 7/54 (12%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQ-------AIQFQKKCPTCRKHLKMNNF 377 CP+C L EP T CGH FC C+ + ++ CP C++ + +F Sbjct: 16 CPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLCKEPFRPGSF 69
>TRI10_HUMAN (Q9UDY6) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 481 Score = 40.8 bits (94), Expect = 0.003 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 7/54 (12%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQ-------AIQFQKKCPTCRKHLKMNNF 377 CP+C L EP T CGH FC C+ + ++ CP C++ + +F Sbjct: 16 CPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLCKEPFRPGSF 69
>TRIM5_HUMAN (Q9C035) Tripartite motif protein 5 (EC 6.3.2.-) (RING finger| protein 88) Length = 493 Score = 40.8 bits (94), Expect = 0.003 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 6/56 (10%) Frame = +3 Query: 204 VKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCI----KQAI--QFQKKCPTCR 353 + V KE + TCP+C L +P + CGH FC C+ K+++ + + CP CR Sbjct: 5 ILVNVKEEV-TCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCR 59
>RAD5_ASHGO (Q753V5) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1085 Score = 40.8 bits (94), Expect = 0.003 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 10/49 (20%) Frame = +3 Query: 237 CPVCWNKLDEPAT----TMCGHIFCTNCIKQAIQFQKK------CPTCR 353 C +C + P T T CGH FC +C+ + IQFQ K CP CR Sbjct: 832 CSICTCEAISPLTSVVFTRCGHPFCESCLLEYIQFQNKKGSETICPNCR 880
>UHRF2_HUMAN (Q96PU4) Ubiquitin-like PHD and RING finger domain-containing| protein 2 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nuclear zinc finger Length = 802 Score = 40.8 bits (94), Expect = 0.003 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = +3 Query: 222 EPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK-KCPTCRKHLKMNNFHRIYLPN 398 E F C C + +P TT C H C +C++++ + Q CP CR L N I +PN Sbjct: 728 EQSFMCVCCQELVYQPVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQN---YIMIPN 784
>CM007_PONPY (Q5RD97) Protein C13orf7 homolog| Length = 726 Score = 40.8 bits (94), Expect = 0.003 Identities = 15/47 (31%), Positives = 25/47 (53%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKHLKMNN 374 TC +C K+ +P + H+FC+ CI ++ +CP CR + N Sbjct: 17 TCHICLGKVRQPVICINNHVFCSICIDLWLKNNSQCPACRVPITPEN 63
>CM007_HUMAN (Q5W0B1) Protein C13orf7| Length = 726 Score = 40.8 bits (94), Expect = 0.003 Identities = 15/47 (31%), Positives = 25/47 (53%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKHLKMNN 374 TC +C K+ +P + H+FC+ CI ++ +CP CR + N Sbjct: 17 TCHICLGKVRQPVICINNHVFCSICIDLWLKNNSQCPACRVPITPEN 63
>RAD5_EMENI (Q5BHD6) DNA repair protein rad5 (EC 3.6.1.-)| Length = 1202 Score = 40.4 bits (93), Expect = 0.004 Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 10/91 (10%) Frame = +3 Query: 237 CPVCWNK-LDEPATTMCGHIFCTNCIKQAIQFQK------KCPTCRKHLKMNNFH---RI 386 CP+C + + +PA T C H C C+K IQ Q+ +C +CR L + R Sbjct: 892 CPICSEEPMIDPAVTACWHSACKGCLKDYIQHQRDKGVQPRCFSCRADLNPQDIFEVVRY 951 Query: 387 YLPNTAR*GVLPGRTMVDLLLRSIVVPSSPR 479 PNT P D + S P PR Sbjct: 952 QSPNTTPTEQTPSSIGGDNVYSSSQPPPPPR 982
>TRI50_MOUSE (Q810I2) Tripartite motif protein 50| Length = 483 Score = 40.4 bits (93), Expect = 0.004 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNC---IKQAIQFQKKCPTCRK 356 CP+C EP CGH +C +C + Q + + CP CR+ Sbjct: 16 CPICLEVFKEPLMLQCGHSYCKDCLDNLSQHLDSELCCPVCRQ 58
>TRI49_HUMAN (Q9NS80) Tripartite motif protein 49 (RING finger protein 18)| (Testis-specific ring-finger protein) Length = 452 Score = 40.4 bits (93), Expect = 0.004 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIK---QAIQFQKKCPTCRKHLKMNN 374 CP+C N +P T CGH FC C Q I F +C C K + N Sbjct: 15 CPLCMNYFIDPVTIDCGHSFCRPCFYLNWQDIPFLVQCSECTKSTEQIN 63
>RAD5_KLULA (Q6CJM4) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1114 Score = 40.4 bits (93), Expect = 0.004 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 10/73 (13%) Frame = +3 Query: 225 PIFTCPVCWNKLDEPAT----TMCGHIFCTNCIKQAIQFQK------KCPTCRKHLKMNN 374 P F C +C + EP + T C H FC C+ + I+FQ+ CP CR + N Sbjct: 854 PSFECAICTTECIEPLSAVSITECLHTFCEPCLAEYIEFQQNKKLSINCPYCRMPISEAN 913 Query: 375 FHRIYLPNTAR*G 413 ++ P A G Sbjct: 914 VLKLKEPIDAERG 926
>RN146_MOUSE (Q9CZW6) RING finger protein 146| Length = 359 Score = 40.4 bits (93), Expect = 0.004 Identities = 16/59 (27%), Positives = 26/59 (44%) Frame = +3 Query: 186 KTSKEPVKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKHL 362 K ++ P + C +C P + C H+FC C+K A K+C CR+ + Sbjct: 21 KANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWLGKRCALCRQEI 79
>RN146_HUMAN (Q9NTX7) RING finger protein 146 (Dactylidin)| Length = 359 Score = 40.4 bits (93), Expect = 0.004 Identities = 16/59 (27%), Positives = 26/59 (44%) Frame = +3 Query: 186 KTSKEPVKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKHL 362 K ++ P + C +C P + C H+FC C+K A K+C CR+ + Sbjct: 20 KANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWLGKRCALCRQEI 78
>TRAF6_HUMAN (Q9Y4K3) TNF receptor-associated factor 6 (Interleukin 1 signal| transducer) (RING finger protein 85) Length = 522 Score = 40.4 bits (93), Expect = 0.004 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = +3 Query: 216 PKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQ-FQKKCPTCRKHLKMN 371 P E + CP+C L E T CGH FC CI ++I+ KCP + L N Sbjct: 63 PLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLEN 115
>RN146_PONPY (Q5REL3) RING finger protein 146| Length = 358 Score = 40.4 bits (93), Expect = 0.004 Identities = 16/59 (27%), Positives = 26/59 (44%) Frame = +3 Query: 186 KTSKEPVKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKHL 362 K ++ P + C +C P + C H+FC C+K A K+C CR+ + Sbjct: 19 KANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWLGKRCALCRQEI 77
>CM007_MOUSE (Q8K2Y0) Protein C13orf7 homolog| Length = 722 Score = 40.4 bits (93), Expect = 0.004 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKHLKMNN 374 TC +C K+ +P H+FC+ CI ++ +CP CR + N Sbjct: 17 TCHICLGKVRQPVVCTNNHVFCSICIDLWLKNNSQCPACRVPITPEN 63
>TRAF6_MOUSE (P70196) TNF receptor-associated factor 6| Length = 530 Score = 40.4 bits (93), Expect = 0.004 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = +3 Query: 216 PKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQ-FQKKCPTCRKHLKMN 371 P E + CP+C L E T CGH FC CI ++I+ KCP + L N Sbjct: 63 PLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLEN 115
>UHRF2_MOUSE (Q7TMI3) Ubiquitin-like PHD and RING finger domain-containing| protein 2 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95-like ring finger protein) (Nuclear zinc finger protein Np97) (NIRF) Length = 803 Score = 40.0 bits (92), Expect = 0.006 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = +3 Query: 222 EPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK-KCPTCRKHLKMN 371 E F C C + +P TT C H C +C++++ + Q CP CR L N Sbjct: 729 EQSFMCVCCQELVYQPVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQN 779
>TRI50_HUMAN (Q86XT4) Tripartite motif protein 50| Length = 487 Score = 40.0 bits (92), Expect = 0.006 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 3/54 (5%) Frame = +3 Query: 204 VKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQA---IQFQKKCPTCRK 356 V + E CP+C EP CGH +C C+ + + +CP CR+ Sbjct: 5 VSLLELEDWLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQ 58
>TRI35_HUMAN (Q9UPQ4) Tripartite motif protein 35 (Hemopoeitic lineage switch| protein 5) Length = 493 Score = 39.7 bits (91), Expect = 0.007 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQA--IQFQKKCPTCR 353 C VC++ + T CGH FC C+ + +Q CP C+ Sbjct: 21 CAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVCK 61
>TRI39_HUMAN (Q9HCM9) Tripartite motif protein 39 (RING finger protein 23)| (Testis-abundant finger protein) Length = 518 Score = 39.7 bits (91), Expect = 0.007 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIK---QAIQFQKKCPTCRK 356 +C VC L EP CGH FC CI + ++ CP CRK Sbjct: 28 SCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRK 71
>TRI47_MOUSE (Q8C0E3) Tripartite motif protein 47| Length = 641 Score = 39.7 bits (91), Expect = 0.007 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +3 Query: 231 FTCPVCWNKLDEPATTMCGHIFCTNCI 311 F+CP+C L EP T CGH FC C+ Sbjct: 7 FSCPICLEPLREPVTLPCGHNFCLACL 33
>RAG1_ONCMY (Q91187) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1073 Score = 39.7 bits (91), Expect = 0.007 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCI-KQAIQFQKKCPTC 350 TC VC + L EP + C H+FC +CI K CP C Sbjct: 309 TCQVCDHLLSEPVQSPCRHLFCRSCIAKYIYSLGPHCPAC 348
>RAD5_CANGA (Q6FY76) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1151 Score = 39.7 bits (91), Expect = 0.007 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 9/54 (16%) Frame = +3 Query: 237 CPVCWNKLDEPAT---TMCGHIFCTNCIKQAIQFQK------KCPTCRKHLKMN 371 C +C + E ++ T C H+FC C+++ FQK KCP CR+ + +N Sbjct: 897 CSICTAEPIESSSAVVTECEHVFCKECLEEYGNFQKEKSLQQKCPNCRRDINLN 950
>TRI47_HUMAN (Q96LD4) Tripartite motif protein 47 (Gene overexpressed in| astrocytoma protein) (RING finger protein 100) Length = 638 Score = 39.7 bits (91), Expect = 0.007 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +3 Query: 231 FTCPVCWNKLDEPATTMCGHIFCTNCI 311 F+CP+C L EP T CGH FC C+ Sbjct: 7 FSCPICLEPLREPVTLPCGHNFCLACL 33
>TRI30_MOUSE (P15533) Tripartite motif protein 30 (Down regulatory protein of| interleukin 2 receptor) Length = 496 Score = 39.7 bits (91), Expect = 0.007 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 6/46 (13%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK------KCPTCR 353 TCP+C L EP + C H FC CI + + CP CR Sbjct: 14 TCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCR 59
>TRIM6_MOUSE (Q8BGE7) Tripartite motif protein 6| Length = 488 Score = 39.7 bits (91), Expect = 0.007 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 7/54 (12%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCI----KQAIQFQ---KKCPTCRKHLKMNN 374 TCP+C L EP + CGH FC CI ++ Q CP CR + N Sbjct: 14 TCPICLELLTEPLSIDCGHSFCQVCIIGNSNNSVFGQGGRSSCPVCRTSYQPGN 67
>TRI39_RAT (Q6MFZ5) Tripartite motif protein 39 (RING finger protein 23)| Length = 488 Score = 39.7 bits (91), Expect = 0.007 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIK---QAIQFQKKCPTCRK 356 +C VC L EP CGH FC CI + ++ CP CRK Sbjct: 28 SCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRK 71
>TRI39_MOUSE (Q9ESN2) Tripartite motif protein 39 (RING finger protein 23)| (Testis-abundant finger protein) Length = 488 Score = 39.7 bits (91), Expect = 0.007 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIK---QAIQFQKKCPTCRK 356 +C VC L EP CGH FC CI + ++ CP CRK Sbjct: 28 SCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRK 71
>RNF8_MOUSE (Q8VC56) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) (AIP37) (ActA-interacting protein 37) (LaXp180) Length = 488 Score = 39.7 bits (91), Expect = 0.007 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKHLK 365 C +C E T C H FC+ CI + ++ + +CP CRK ++ Sbjct: 406 CIICSEYFIEAVTLNCAHSFCSFCINEWMKRKVECPICRKDIE 448
>RAD18_YARLI (Q6CHI1) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 344 Score = 39.3 bits (90), Expect = 0.010 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAI-QFQKKCPTCRKHLKMNNFHR 383 C +C P T CGH FC+ CI++ + ++CPTC + +++ + Sbjct: 28 CHICKEFFTAPMITGCGHTFCSLCIQRYLTNTSQRCPTCMQEQQISQLRK 77
>SYWM_CAEEL (P46579) Probable tryptophanyl-tRNA synthetase, mitochondrial (EC| 6.1.1.2) (Tryptophan--tRNA ligase) (TrpRS) Length = 650 Score = 39.3 bits (90), Expect = 0.010 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 8/68 (11%) Frame = +3 Query: 225 PIFTCPVCWNKLDEPATTMCGHIFCTNCIKQ--------AIQFQKKCPTCRKHLKMNNFH 380 P F C +C + P+ CGH+FC CI++ A +CP CR + + + Sbjct: 251 PTFQCSICLENKN-PSALFCGHLFCWTCIQEHAVAATSSASTSSARCPQCRLEFQPRDPN 309 Query: 381 RIYLPNTA 404 + L +T+ Sbjct: 310 NLRLLSTS 317
>CWC24_YARLI (Q6CB23) Pre-mRNA-splicing factor CWC24| Length = 256 Score = 39.3 bits (90), Expect = 0.010 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKH 359 TCP+C + P T C H FC C + ++ C C K+ Sbjct: 205 TCPICQGEFKSPVVTQCCHYFCEKCFLAKHKKKQNCFVCGKN 246
>RAD18_SCHPO (O74747) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) (RAD18 homolog) Length = 387 Score = 39.3 bits (90), Expect = 0.010 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCR 353 C +C P T C H FC+ CI+ ++ CP CR Sbjct: 29 CLICHEYFRAPLITSCSHTFCSFCIRDYLREHPMCPACR 67
>RAD5_SCHPO (P36607) DNA repair protein rad5 (EC 3.6.1.-)| Length = 1133 Score = 39.3 bits (90), Expect = 0.010 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 8/51 (15%) Frame = +3 Query: 228 IFTCPVCWNK-LDEPATTMCGHIFCTNCIKQAIQFQKK-------CPTCRK 356 I CP+C N+ + P C H C +C+ + IQ+QK+ C TCR+ Sbjct: 874 ITECPICCNEPIQNPLLLNCKHACCGDCLSEHIQYQKRRNIIPPLCHTCRQ 924
>CWC24_ASPFU (Q4WUA0) Pre-mRNA-splicing factor cwc24| Length = 339 Score = 39.3 bits (90), Expect = 0.010 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = +3 Query: 231 FTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTC 350 F C +C + P T CGH FC +C A+Q +K P+C Sbjct: 251 FACIICKSSYKSPIVTKCGHYFCESC---ALQRYRKNPSC 287
>LNX1_HUMAN (Q8TBB1) Ubiquitin ligase LNX (EC 6.3.2.-) (Numb-binding protein 1)| (Ligand of Numb-protein X 1) Length = 728 Score = 38.9 bits (89), Expect = 0.013 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKHLKMNN 374 C +C L +P T CGH +CT C+ + + CP RK L + + Sbjct: 41 CHICLQALLDPLDTPCGHTYCTLCLTNFLVEKDFCPMDRKPLVLQH 86
>TRI11_MOUSE (Q99PQ2) Tripartite motif protein 11 (EC 6.3.2.-)| Length = 467 Score = 38.9 bits (89), Expect = 0.013 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQA---IQFQKKCPTCRK 356 TC +C + +P T CGH FC CI++ + CP CR+ Sbjct: 15 TCAICLDYFTDPVMTDCGHNFCRECIRRCWGQPEGPYACPECRE 58
>RAG1_HUMAN (P15918) V(D)J recombination-activating protein 1 (RAG-1) (RING| finger protein 74) Length = 1043 Score = 38.9 bits (89), Expect = 0.013 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQ-KKCPTCR 353 +C +C + L +P T C H+FC CI + ++ CP+CR Sbjct: 292 SCQICEHILADPVETNCKHVFCRVCILRCLKVMGSYCPSCR 332
>CWC24_EMENI (Q5AVC5) Pre-mRNA-splicing factor cwc24| Length = 332 Score = 38.9 bits (89), Expect = 0.013 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = +3 Query: 231 FTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTC 350 F C +C P T CGH FC +C A+Q +K P+C Sbjct: 239 FACIICKKPYQNPIVTKCGHYFCESC---ALQRYRKNPSC 275
>TRI56_MOUSE (Q80VI1) Tripartite motif protein 56| Length = 734 Score = 38.9 bits (89), Expect = 0.013 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQA-IQFQKKCPTCRK 356 C +C +L P T C H +C +C+ Q I Q +CP CR+ Sbjct: 21 CKICLEQLHTPKTLPCLHTYCQDCLAQLDIGGQVRCPECRE 61
>ATL1C_ARATH (Q9SK92) RING-H2 finger protein ATL1C precursor (RING-H2 finger| protein ATL15) Length = 381 Score = 38.9 bits (89), Expect = 0.013 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Frame = +3 Query: 237 CPVCWNKLDEPATT----MCGHIFCTNCIKQAIQFQKKCPTCRKHL 362 CPVC N+ ++ T C H+F CI ++ Q CP CR +L Sbjct: 118 CPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANL 163
>ATL3L_ARATH (Q9LZJ6) RING-H2 finger protein ATL3L (RING-H2 finger protein ATL5)| Length = 257 Score = 38.9 bits (89), Expect = 0.013 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 8/77 (10%) Frame = +3 Query: 147 TGEGSSLQSKSAGKTSKEPVKV----TPKEPIFTCPVCWNKLDEP----ATTMCGHIFCT 302 T SSL K P+ V T + P+ C VC ++ +E CGH+F Sbjct: 79 TQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHV 138 Query: 303 NCIKQAIQFQKKCPTCR 353 +CI + + CP CR Sbjct: 139 DCIDTWFRSRSSCPLCR 155
>TRI34_HUMAN (Q9BYJ4) Tripartite motif protein 34 (Interferon-responsive finger| protein 1) (RING finger protein 21) Length = 488 Score = 38.9 bits (89), Expect = 0.013 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 12/58 (20%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCI----KQAIQF---QKKCPTCR-----KHLKMN 371 TCP+C L EP + CGH C CI K+A+ + CP C +HL+ N Sbjct: 14 TCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHLQAN 71
>TRI11_HUMAN (Q96F44) Tripartite motif protein 11 (EC 6.3.2.-) (RING finger| protein 92) (BIA1 protein) Length = 468 Score = 38.9 bits (89), Expect = 0.013 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQA---IQFQKKCPTCRK 356 TC +C + +P T CGH FC CI++ + CP CR+ Sbjct: 15 TCAICLDYFTDPVMTDCGHNFCRECIRRCWGQPEGPYACPECRE 58
>YR311_MIMIV (Q5UPZ3) Hypothetical RING finger protein R311| Length = 659 Score = 38.9 bits (89), Expect = 0.013 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKHLKMN 371 CPVC++ +CGH C C+ + K CP C + + +N Sbjct: 502 CPVCYDDDYIKTKLICGHTVCLTCVLNILPNSKGCPLCMEPININ 546
>UHRF1_MOUSE (Q8VDF2) Ubiquitin-like PHD and RING finger domain-containing| protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Nuclear zinc finger protein Np95) (Nuclear protein 95) Length = 782 Score = 38.5 bits (88), Expect = 0.016 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = +3 Query: 231 FTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK-KCPTCRKHLKMNNFHRIYLP 395 F C C + P TT+C H C +C+ ++ + Q CP CR L ++ R+ P Sbjct: 711 FQCICCQELVFRPVTTVCQHNVCKDCLDRSFRAQVFSCPACRFELDHSSPTRVNQP 766
>UHRF1_RAT (Q7TPK1) Ubiquitin-like PHD and RING finger domain-containing| protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Liver regeneration-related protein LRRG126) Length = 774 Score = 38.5 bits (88), Expect = 0.016 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = +3 Query: 231 FTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK-KCPTCRKHLKMNNFHRIYLP 395 F C C + P TT+C H C +C+ ++ + Q CP CR L ++ R+ P Sbjct: 703 FQCICCQELVFRPVTTVCQHNVCKDCLDRSFRAQVFSCPACRYDLDHSSPTRVNQP 758
>TRI27_MOUSE (Q62158) Zinc-finger protein RFP (Ret finger protein) (Tripartite| motif protein 27) Length = 513 Score = 38.5 bits (88), Expect = 0.016 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 8/54 (14%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQ---AIQFQKKCPTCR-----KHLKMN 371 TCPVC EP CGH C C+ + A + CP CR +H++ N Sbjct: 15 TCPVCLQYFVEPMMLDCGHNICCACLARCWGAAETNVSCPQCRETFPQRHMRPN 68
>TRI35_MOUSE (Q8C006) Tripartite motif protein 35 (Macrophage-derived| apoptosis-inducing RBCC protein) (MAIR protein) (Nc8 protein) (Hemopoeitic lineage switch protein 5) Length = 501 Score = 38.5 bits (88), Expect = 0.016 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQA--IQFQKKCPTCRK 356 C VC++ + T CGH FC C+ +Q CP C++ Sbjct: 21 CAVCYDPFRDAVTLRCGHNFCRRCVSGCWEVQTTPSCPVCKE 62
>CWC24_CANAL (Q5ACW2) Pre-mRNA-splicing factor CWC24| Length = 216 Score = 38.5 bits (88), Expect = 0.016 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Frame = +3 Query: 207 KVTPKEPI-FTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKK--CPTCRK 356 +V KE I F C +C + P T CGHIFC C + +KK C C K Sbjct: 145 EVKEKEDIPFKCVLCKSDYKSPIKTECGHIFCKACFLDRYKAKKKGTCFICHK 197
>TRI17_RAT (Q9WV59) Tripartite motif protein 17 (Testis RING finger protein)| Length = 477 Score = 38.5 bits (88), Expect = 0.016 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK------------KCPTCRKHLKMNN 374 TC +C + +P T CGH FC CI+ + + K CP CR+ N Sbjct: 15 TCSICLDYFTDPVMTACGHNFCRECIQMSWEKGKGKKGKKKQKGSFPCPECREMSPQRN 73
>TRI17_MOUSE (Q7TPM3) Tripartite motif protein 17| Length = 477 Score = 38.5 bits (88), Expect = 0.016 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK------------KCPTCRKHLKMNN 374 TC +C + +P T CGH FC CI+ + + K CP CR+ N Sbjct: 15 TCSICLDYFTDPVMTACGHNFCRECIQMSWEKGKVKKGKKKQKGSFPCPECREMSPQRN 73
>BRE1_NEUCR (Q7S304) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-)| Length = 707 Score = 38.1 bits (87), Expect = 0.021 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAI-QFQKKCPTCRK 356 C VC + CGH+FC C+ + +KCP+C K Sbjct: 655 CSVCRSNFKNTILKGCGHVFCNECVDNRLANRMRKCPSCNK 695
>ATL5L_ARATH (Q9FIR0) Putative RING-H2 finger protein ATL5L| Length = 289 Score = 38.1 bits (87), Expect = 0.021 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 5/50 (10%) Frame = +3 Query: 237 CPVCWNKLDEP-----ATTMCGHIFCTNCIKQAIQFQKKCPTCRKHLKMN 371 C +C + +E T C H+F CI Q ++ K CP CR++L N Sbjct: 114 CAICLLEFEEEHILLRLLTTCYHVFHQECIDQWLESNKTCPVCRRNLDPN 163
>LNX1_MOUSE (O70263) Ubiquitin ligase LNX (EC 6.3.2.-) (Numb-binding protein 1)| (Ligand of Numb-binding protein 1) (Ligand of Numb-protein X 1) Length = 728 Score = 38.1 bits (87), Expect = 0.021 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRK 356 C +C L +P T CGH +CT C+ + + CP RK Sbjct: 45 CHICLQALLDPLDTPCGHTYCTLCLTNFLVEKDFCPVDRK 84
>RAG1_PIG (Q867B5) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1043 Score = 38.1 bits (87), Expect = 0.021 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQ-KKCPTC 350 +C +C + L +P T C H+FC CI + ++ CP+C Sbjct: 292 SCQICEHILADPVETSCKHVFCRICILRCLKVMGSSCPSC 331
>RNF41_XENLA (Q5FWL3) RING finger protein 41| Length = 317 Score = 38.1 bits (87), Expect = 0.021 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Frame = +3 Query: 237 CPVCWNKLDEPATTM-CGHIFCTNCIKQAIQFQKKCPTCR 353 CP+C L+EP C H FC CI Q Q+ CP R Sbjct: 18 CPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDR 57
>RNF41_MOUSE (Q8BH75) RING finger protein 41| Length = 317 Score = 38.1 bits (87), Expect = 0.021 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Frame = +3 Query: 237 CPVCWNKLDEPATTM-CGHIFCTNCIKQAIQFQKKCPTCR 353 CP+C L+EP C H FC CI Q Q+ CP R Sbjct: 18 CPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDR 57
>RNF41_HUMAN (Q9H4P4) RING finger protein 41| Length = 317 Score = 38.1 bits (87), Expect = 0.021 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Frame = +3 Query: 237 CPVCWNKLDEPATTM-CGHIFCTNCIKQAIQFQKKCPTCR 353 CP+C L+EP C H FC CI Q Q+ CP R Sbjct: 18 CPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDR 57
>RAD5_CANAL (Q5ACX1) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1084 Score = 38.1 bits (87), Expect = 0.021 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 9/59 (15%) Frame = +3 Query: 237 CPVCWN---KLDEPATTMCGHIFCTNCIKQAIQFQKK------CPTCRKHLKMNNFHRI 386 C +C E T C H FC +CI + + FQK+ CP CR + RI Sbjct: 816 CSICTQVPIPYSEMVVTPCAHTFCLSCILEHLDFQKELKKEKLCPNCRSPISKYQLFRI 874
>SM3L3_ARATH (Q9FIY7) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 3 (EC 3.6.1.-) (SMARCA3-like protein 3) Length = 1277 Score = 38.1 bits (87), Expect = 0.021 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK--KCPTCRKHLK 365 CP+C D+P T C H C C+ + + CP CR LK Sbjct: 1040 CPICLESADDPVLTPCAHRMCRECLLTSWRSPSCGLCPICRTILK 1084
>CWC24_ASHGO (Q752S4) Pre-mRNA-splicing factor CWC24| Length = 250 Score = 38.1 bits (87), Expect = 0.021 Identities = 13/40 (32%), Positives = 19/40 (47%) Frame = +3 Query: 231 FTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTC 350 F C +C P T CGH FC C + ++ ++C C Sbjct: 156 FRCVLCRGHYRAPVRTRCGHYFCGGCFARRVRETRQCAVC 195
>SINA2_ARATH (Q9M2P4) Ubiquitin ligase SINAT2 (EC 6.3.2.-) (Seven in absentia| homolog 2) Length = 308 Score = 37.7 bits (86), Expect = 0.028 Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = +3 Query: 228 IFTCPVCWNKLDEPATTMC--GHIFCTNCIKQAIQFQKKCPTCRKHL 362 + CPVC N L P C GH C+NC ++ Q CPTCR L Sbjct: 57 LLECPVCTN-LMYPPIHQCPNGHTLCSNC---KLRVQNTCPTCRYEL 99
>RAG1_CHICK (P24271) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1041 Score = 37.7 bits (86), Expect = 0.028 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK-KCPTC 350 +C +C + L +P T C H+FC CI I+ CP+C Sbjct: 288 SCQICEHILADPVETTCRHLFCRTCILSCIRVMGCYCPSC 327
>RAG1_RABIT (P34088) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1042 Score = 37.7 bits (86), Expect = 0.028 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQ-KKCPTCR 353 +C +C + L +P T C H+FC CI + ++ CP+C+ Sbjct: 291 SCQICEHILADPVETSCKHVFCRICILRCLKVMGSYCPSCQ 331
>DTX3L_HUMAN (Q8TDB6) Protein deltex 3-like protein (B-lymphoma- and| BAL-associated protein) (Rhysin-2) (Rhysin2) Length = 740 Score = 37.7 bits (86), Expect = 0.028 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = +3 Query: 183 GKTSKEPVKVTPKEPIFTCPVCWNKL-DEPATTMCGHIFCTNCIKQAIQFQKKCPTCR 353 G S E ++ KE C +C + + ++ C H FC CI +A+ ++ CPTC+ Sbjct: 544 GSVSSEASELDKKEKGI-CVICMDTISNKKVLPKCKHEFCAPCINKAMSYKPICPTCQ 600
>UHRF1_HUMAN (Q96T88) Ubiquitin-like PHD and RING finger domain-containing| protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Inverted CCAAT box-binding protein of 90 kDa) (Transcription factor ICBP90) (Nuclear zinc Length = 793 Score = 37.7 bits (86), Expect = 0.028 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = +3 Query: 222 EPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK-KCPTCRKHL 362 E F C C + P TT+C H C +C+ ++ + Q CP CR L Sbjct: 719 EETFQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDL 766
>RAG1_XENLA (Q91829) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1045 Score = 37.7 bits (86), Expect = 0.028 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK-KCPTCR 353 +C VC + L +P T C H+FC CI + I+ CP+C+ Sbjct: 293 SCLVCEHILSDPVQTSCKHLFCRICILKYIKLMGCYCPSCK 333
>ATL3B_ARATH (Q8RXX9) RING-H2 finger protein ATL3B precursor (RING-H2 finger| protein ATL6) Length = 398 Score = 37.7 bits (86), Expect = 0.028 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 4/84 (4%) Frame = +3 Query: 237 CPVCWNKLDEPATTM----CGHIFCTNCIKQAIQFQKKCPTCRKHLKMNNFHRIYLPNTA 404 C +C N+ ++ T C H+F +CI ++ CP CR +L Sbjct: 128 CAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQ--------VAE 179 Query: 405 R*GVLPGRTMVDLLLRSIVVPSSP 476 V PG T DL L+ +VV P Sbjct: 180 GESVEPGGTEPDLELQQVVVNPEP 203
>ZN179_HUMAN (Q9ULX5) Zinc finger protein 179 (Brain finger protein) (RING| finger protein 112) Length = 632 Score = 37.4 bits (85), Expect = 0.037 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Frame = +3 Query: 201 PVKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCI---KQAIQFQKKCPTCRKHLK 365 P + P+E + TC +C +L +P + CGH FC C + CP CRK K Sbjct: 46 PQPMAPRE-LPTCSICLERLRDPISLDCGHDFCIRCFSTHRLPGCEPPCCPECRKICK 102
>PCGF2_MOUSE (P23798) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) (Zfp-144) Length = 342 Score = 37.4 bits (85), Expect = 0.037 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = +3 Query: 204 VKVTPKEPIFTCPVCWNKLDEPATTM-CGHIFCTNCIKQAIQFQKKCPTC 350 +K+T P C +C + T + C H FC CI + ++ K CP C Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMC 56
>BARD1_HUMAN (Q99728) BRCA1-associated RING domain protein 1 (BARD-1)| Length = 777 Score = 37.4 bits (85), Expect = 0.037 Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 1/87 (1%) Frame = +3 Query: 93 NTRNKRQRVAPVVNISPETGEGSSLQSKSAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPA 272 + R R R P + E +++ G + + E + C C N L EP Sbjct: 3 DNRQPRNR-QPRIRSGNEPRSAPAMEPDGRGAWAHSRAALDRLEKLLRCSRCTNILREPV 61 Query: 273 TTM-CGHIFCTNCIKQAIQFQKKCPTC 350 C HIFC+NC+ I CP C Sbjct: 62 CLGGCEHIFCSNCVSDCI--GTGCPVC 86
>ZNFP_LYCVA (P18541) RING finger protein Z| Length = 89 Score = 37.4 bits (85), Expect = 0.037 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 3/71 (4%) Frame = +3 Query: 150 GEGSSLQSKSAGKTSKEPV--KVTPKEPIFTCPVCWNKLDEPATTMC-GHIFCTNCIKQA 320 G+G S + K T++ + T P+ +C CW K D + C H C +C+ Sbjct: 1 GQGKSREEKGTNSTNRAEILPDTTYLGPL-SCKSCWQKFD--SLVRCHDHYLCRHCLNLL 57 Query: 321 IQFQKKCPTCR 353 + +CP C+ Sbjct: 58 LSVSDRCPLCK 68
>TOPRS_MOUSE (Q80Z37) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1033 Score = 37.4 bits (85), Expect = 0.037 Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = +3 Query: 171 SKSAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPA-TTMCGHIFCTNCIKQAIQFQKKCPT 347 S AG + + P CP+C ++ D + C H FC C+++ + + +CP Sbjct: 82 SPKAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAECPL 141 Query: 348 CRK 356 C++ Sbjct: 142 CKQ 144
>RFPL2_HUMAN (O75678) Ret finger protein-like 2 (RING finger protein 79)| Length = 378 Score = 37.4 bits (85), Expect = 0.037 Identities = 22/73 (30%), Positives = 32/73 (43%) Frame = +3 Query: 93 NTRNKRQRVAPVVNISPETGEGSSLQSKSAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPA 272 N NKR AP SP+ Q + G +S+ + +CPVC + L++P Sbjct: 57 NLTNKRPSCAP----SPQDLSAQWKQLEDRGASSRRVDMAALFQEASSCPVCSDYLEKPM 112 Query: 273 TTMCGHIFCTNCI 311 + CG C CI Sbjct: 113 SLECGCAVCLKCI 125
>PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) Length = 344 Score = 37.4 bits (85), Expect = 0.037 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = +3 Query: 204 VKVTPKEPIFTCPVCWNKLDEPATTM-CGHIFCTNCIKQAIQFQKKCPTC 350 +K+T P C +C + T + C H FC CI + ++ K CP C Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMC 56
>TRI27_HUMAN (P14373) Zinc-finger protein RFP (Ret finger protein) (Tripartite| motif protein 27) (RING finger protein 76) Length = 513 Score = 37.4 bits (85), Expect = 0.037 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 8/54 (14%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQ---AIQFQKKCPTCR-----KHLKMN 371 TCPVC EP CGH C C+ + + CP CR +H++ N Sbjct: 15 TCPVCLQYFAEPMMLDCGHNICCACLARCWGTAETNVSCPQCRETFPQRHMRPN 68
>TOPRS_HUMAN (Q9NS56) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1045 Score = 37.4 bits (85), Expect = 0.037 Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = +3 Query: 171 SKSAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPA-TTMCGHIFCTNCIKQAIQFQKKCPT 347 S AG + + P CP+C ++ D + C H FC C+++ + + +CP Sbjct: 81 SPKAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAECPL 140 Query: 348 CRK 356 C++ Sbjct: 141 CKQ 143
>PEX12_CAEEL (Q19189) Putative peroxisome assembly protein 12 (Peroxin-12)| Length = 359 Score = 37.4 bits (85), Expect = 0.037 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +3 Query: 237 CPVCWNK-LDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKHLKMNNFHRIYL 392 CP+C K +++ A + G++FC CI Q + KCP + + R+++ Sbjct: 307 CPICLKKRVNDTALFVSGYVFCYTCINQYVNTYNKCPVTGCPANVQHLIRLFV 359
>CWC24_USTMA (Q4P400) Pre-mRNA-splicing factor CWC24| Length = 355 Score = 37.4 bits (85), Expect = 0.037 Identities = 13/40 (32%), Positives = 18/40 (45%) Frame = +3 Query: 231 FTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTC 350 F C +C +P T C H FC++C + KC C Sbjct: 262 FACLICRKAFTDPVVTRCAHYFCSSCAIKRFAKNSKCFAC 301
>DG17_DICDI (P11467) Protein DG17| Length = 458 Score = 37.4 bits (85), Expect = 0.037 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Frame = +3 Query: 219 KEPIFTCPVCWNKLDEPATTMC--GHIFCTNCIKQAIQFQKKCPTCRKHLKMNN 374 K+ +TCP+C+ + + C GH C C +++++ +K+C TC+ + N Sbjct: 21 KKNKYTCPICFEFIYKKQIYQCKSGHHACKECWEKSLETKKECMTCKSVVNSYN 74
>TRI18_MUSSP (P82457) Midline-1 (Tripartite motif protein 18)| Length = 667 Score = 37.4 bits (85), Expect = 0.037 Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 18/103 (17%) Frame = +3 Query: 222 EPIFTCPVCWNKLDEPATTMCGHIFCTNC--------------IKQAIQFQKKCPTCRKH 359 E TCP+C L++P C H C NC ++ FQ CPTCR Sbjct: 5 ESELTCPICLELLEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQ--CPTCR-- 60 Query: 360 LKMNNFHRIYLPNTAR*GVLPGRTMVDLLLR----SIVVPSSP 476 H I L G+ T+ +++ R S+ P+SP Sbjct: 61 ------HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSP 97
>MNAB_HUMAN (Q9HBD1) Membrane-associated nucleic acid-binding protein (RING| finger protein 164) Length = 1191 Score = 37.0 bits (84), Expect = 0.048 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Frame = +3 Query: 201 PVKVTPKEPIFTCPVCWNKLDE----PATTMCGHIFCTNCIKQAIQFQKKCP 344 PV+ +CP+C+N+ DE P + C H C C+ + +K CP Sbjct: 2 PVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKL--HRKACP 51
>PCGF6_MOUSE (Q99NA9) Polycomb group RING finger protein 6 (RING finger protein| 134) (Mel18 and Bmi1-like RING finger) Length = 353 Score = 37.0 bits (84), Expect = 0.048 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 3/65 (4%) Frame = +3 Query: 165 LQSKSAGKTSKEP--VKVTPKEPIFTCPVCWNKLDEPAT-TMCGHIFCTNCIKQAIQFQK 335 L+S A +E + + P C +C L + T T C H FC +CI + + Sbjct: 111 LESGRADSEDEEERLINLVELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSN 170 Query: 336 KCPTC 350 +CP C Sbjct: 171 RCPKC 175
>TRI17_HUMAN (Q9Y577) Tripartite motif protein 17 (Testis RING finger protein)| (RING finger protein 16) Length = 477 Score = 37.0 bits (84), Expect = 0.048 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 12/67 (17%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK------------KCPTCRKHLKMNNF 377 TC +C + +P T CGH FC CI+ + + + CP CR+ N Sbjct: 15 TCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECREMSPQRNL 74 Query: 378 HRIYLPN 398 LPN Sbjct: 75 ----LPN 77
>RNF41_BRARE (Q7ZW16) RING finger protein 41| Length = 318 Score = 37.0 bits (84), Expect = 0.048 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Frame = +3 Query: 237 CPVCWNKLDEPATTM-CGHIFCTNCIKQAIQFQKKCPTCR 353 CP+C L+EP C H FC CI Q Q+ CP R Sbjct: 18 CPICSGVLEEPVRAPHCEHAFCNACITQWFAQQQICPVDR 57
>PCGF6_RAT (Q5XI70) Polycomb group RING finger protein 6 (RING finger protein| 134) Length = 351 Score = 37.0 bits (84), Expect = 0.048 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 3/65 (4%) Frame = +3 Query: 165 LQSKSAGKTSKEP--VKVTPKEPIFTCPVCWNKLDEPAT-TMCGHIFCTNCIKQAIQFQK 335 L+S A +E + + P C +C L + T T C H FC +CI + + Sbjct: 109 LESGRADSEDEEERLINLVELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSN 168 Query: 336 KCPTC 350 +CP C Sbjct: 169 RCPKC 173
>PCGF4_MOUSE (P25916) Polycomb group RING finger protein 4 (Polycomb complex| protein BMI-1) Length = 324 Score = 37.0 bits (84), Expect = 0.048 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = +3 Query: 204 VKVTPKEPIFTCPVCWNKLDEPATTM-CGHIFCTNCIKQAIQFQKKCPTC 350 +K+T P C +C + T + C H FC CI + ++ K CP C Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPIC 56
>PCGF4_HUMAN (P35226) Polycomb group RING finger protein 4 (Polycomb complex| protein BMI-1) (RING finger protein 51) Length = 326 Score = 37.0 bits (84), Expect = 0.048 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = +3 Query: 204 VKVTPKEPIFTCPVCWNKLDEPATTM-CGHIFCTNCIKQAIQFQKKCPTC 350 +K+T P C +C + T + C H FC CI + ++ K CP C Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPIC 56
>PCGF4_FELCA (Q9TST0) Polycomb group RING finger protein 4 (Polycomb complex| protein BMI-1) Length = 326 Score = 37.0 bits (84), Expect = 0.048 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = +3 Query: 204 VKVTPKEPIFTCPVCWNKLDEPATTM-CGHIFCTNCIKQAIQFQKKCPTC 350 +K+T P C +C + T + C H FC CI + ++ K CP C Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPIC 56
>BRE1_SCHPO (O74563) Ubiquitin-protein ligase bre1 (EC 6.3.2.-)| Length = 680 Score = 37.0 bits (84), Expect = 0.048 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 3/92 (3%) Frame = +3 Query: 126 VVNISPETGEGSSLQSKSAG-KTSKEPVKVTPKEPIFTCPVC-WNKLDEPATTMCGHIFC 299 +++ E E + K G TS E +K + C VC + + + ++CGH FC Sbjct: 591 ILSKQDEEHEKEKRKLKDTGVSTSAEELKTF--RAMCKCSVCNFERWKDRIISLCGHGFC 648 Query: 300 TNCIKQAIQF-QKKCPTCRKHLKMNNFHRIYL 392 CI++ I+ Q++CP C + ++ I+L Sbjct: 649 YQCIQKRIETRQRRCPICGRGFGASDVIPIHL 680
>PCGF6_HUMAN (Q9BYE7) Polycomb group RING finger protein 6 (RING finger protein| 134) (Mel18 and Bmi1-like RING finger) Length = 352 Score = 37.0 bits (84), Expect = 0.048 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = +3 Query: 204 VKVTPKEPIFTCPVCWNKLDEPAT-TMCGHIFCTNCIKQAIQFQKKCPTC 350 + ++ P C +C L + T T C H FC +CI + + +CP C Sbjct: 125 INLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKC 174
>MNAB_MOUSE (P0C090) Membrane-associated nucleic acid binding protein| Length = 1187 Score = 37.0 bits (84), Expect = 0.048 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Frame = +3 Query: 201 PVKVTPKEPIFTCPVCWNKLDE----PATTMCGHIFCTNCIKQAIQFQKKCP 344 PV+ +CP+C+N+ DE P + C H C C+ + +K CP Sbjct: 2 PVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKL--HRKACP 51
>ZN179_RAT (O70418) Zinc finger protein 179 (Brain finger protein)| Length = 631 Score = 36.6 bits (83), Expect = 0.062 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIK-QAIQFQKK--CPTCRKHLK 365 TC +C +L EP + CGH FC C I + CP CRK K Sbjct: 56 TCSICLERLREPISLDCGHDFCIRCFSTHRIPGCELPCCPECRKICK 102
>ATL1O_ARATH (Q8LFY8) RING-H2 finger protein ATL1O (RING-H2 finger protein| ATL11) Length = 413 Score = 36.6 bits (83), Expect = 0.062 Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 4/106 (3%) Frame = +3 Query: 63 HDDNATVLSHNTRNKRQRVAPVVNISPETGEGSSLQSKSAGKTSKEPVKVTPKEPIFTCP 242 ++DN TV+ +++ Q P+ I + S + S + + + + CP Sbjct: 123 NEDNDTVMEEEFQDREQVDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTD----CP 178 Query: 243 VCWNKLDEPATTM----CGHIFCTNCIKQAIQFQKKCPTCRKHLKM 368 VC N+ +E + C H F +CI + CP CR + M Sbjct: 179 VCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAM 224
>CHFR_MOUSE (Q810L3) Ubiquitin-protein ligase CHFR (EC 6.3.2.-) (Checkpoint| with forkhead and RING finger domains protein) Length = 664 Score = 36.6 bits (83), Expect = 0.062 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 13/82 (15%) Frame = +3 Query: 186 KTSKEPVKVTPKEP-----IFTCPVCWNKLDEPATTM-CGHIFCTNCIKQAIQFQKKCPT 347 +TS E VK +P TC +C + L + + C H FC C ++ CPT Sbjct: 281 QTSSEDVKDASVKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPT 340 Query: 348 CR-------KHLKMNNFHRIYL 392 CR K+ +NN YL Sbjct: 341 CRCPVERICKNHILNNLVEAYL 362
>TRIM1_MOUSE (Q9QUS6) Midline-2 (Midline defect 2) (Tripartite motif protein 1)| Length = 685 Score = 36.6 bits (83), Expect = 0.062 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 14/65 (21%) Frame = +3 Query: 222 EPIFTCPVCWNKLDEPATTMCGHIFCTNC--------------IKQAIQFQKKCPTCRKH 359 E TCP+C ++P C H C +C I+ FQ CPTCR Sbjct: 5 ESELTCPICLELFEDPLLLPCAHSLCFSCAHRILVSSCSSGESIEPITAFQ--CPTCRYV 62 Query: 360 LKMNN 374 + +N+ Sbjct: 63 ISLNH 67
>TRIM1_HUMAN (Q9UJV3) Midline-2 (Midline defect 2) (Tripartite motif protein 1)| (Midin-2) (RING finger protein 60) Length = 715 Score = 36.6 bits (83), Expect = 0.062 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 14/65 (21%) Frame = +3 Query: 222 EPIFTCPVCWNKLDEPATTMCGHIFCTNC--------------IKQAIQFQKKCPTCRKH 359 E TCP+C ++P C H C +C I+ FQ CPTCR Sbjct: 5 ESELTCPICLELFEDPLLLPCAHSLCFSCAHRILVSSCSSGESIEPITAFQ--CPTCRYV 62 Query: 360 LKMNN 374 + +N+ Sbjct: 63 ISLNH 67
>ATL4O_ARATH (Q8W571) RING-H2 finger protein ATL4O precursor| Length = 322 Score = 36.6 bits (83), Expect = 0.062 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Frame = +3 Query: 237 CPVCWNKLDEPATT----MCGHIFCTNCIKQAIQFQKKCPTCRKHL 362 C +C N+L++ T +C H+F +CI + CP CR +L Sbjct: 123 CAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNL 168
>TRIM4_HUMAN (Q9C037) Tripartite motif protein 4 (RING finger protein 87)| Length = 500 Score = 36.6 bits (83), Expect = 0.062 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCIKQAIQ---FQKKCPTCR 353 TCP+C + +P + CGH FC C+ + CP CR Sbjct: 11 TCPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGPFPCPECR 53
>PEX12_DROME (Q9VPT5) Putative peroxisome assembly protein 12 (Peroxin-12)| Length = 297 Score = 36.6 bits (83), Expect = 0.062 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +3 Query: 237 CPVCWNKLDEP-ATTMCGHIFCTNCIKQAIQFQKKCPTCRKHLKMNNFHRIY 389 CPVC + P A ++ G++FC CI ++ CP + +++ RIY Sbjct: 244 CPVCLLSIQTPTACSVSGYVFCWKCIVSHMKEHGTCPVTHYPISLDDLVRIY 295
>TRIM7_HUMAN (Q9C029) Tripartite motif protein 7 (Glycogenin-interacting| protein) (RING finger protein 90) Length = 511 Score = 36.6 bits (83), Expect = 0.062 Identities = 22/89 (24%), Positives = 32/89 (35%), Gaps = 15/89 (16%) Frame = +3 Query: 135 ISPETGEGSSLQSKSAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCI- 311 + P TG G+ ++ + + TC +C EP + CGH FC CI Sbjct: 4 VGPRTGPGTGAEALALAAELQGEA---------TCSICLELFREPVSVECGHSFCRACIG 54 Query: 312 --------------KQAIQFQKKCPTCRK 356 +A F CP CR+ Sbjct: 55 RCWERPGAGSVGAATRAPPFPLPCPQCRE 83
>TRI18_HUMAN (O15344) Midline-1 (EC 6.3.2.-) (Tripartite motif protein 18)| (Putative transcription factor XPRF) (Midin) (RING finger protein 59) (Midline 1 RING finger protein) Length = 667 Score = 36.6 bits (83), Expect = 0.062 Identities = 28/103 (27%), Positives = 40/103 (38%), Gaps = 18/103 (17%) Frame = +3 Query: 222 EPIFTCPVCWNKLDEPATTMCGHIFCTNC--------------IKQAIQFQKKCPTCRKH 359 E TCP+C ++P C H C NC ++ FQ CPTCR Sbjct: 5 ESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQ--CPTCR-- 60 Query: 360 LKMNNFHRIYLPNTAR*GVLPGRTMVDLLLR----SIVVPSSP 476 H I L G+ T+ +++ R S+ P+SP Sbjct: 61 ------HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSP 97
>TRI38_HUMAN (O00635) Tripartite motif protein 38 (RING finger protein 15) (Zinc| finger protein RoRet) Length = 465 Score = 36.2 bits (82), Expect = 0.081 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 9/56 (16%) Frame = +3 Query: 234 TCPVCWNKLDEPATTMCGHIFCTNCI---------KQAIQFQKKCPTCRKHLKMNN 374 TC +C + + P + CGH +C CI KQ Q CP CR M++ Sbjct: 15 TCSICLSLMTNPVSINCGHSYCHLCITDFFKNPSQKQLRQETFCCPQCRAPFHMDS 70
>RN126_MOUSE (Q91YL2) RING finger protein 126| Length = 313 Score = 36.2 bits (82), Expect = 0.081 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 11/71 (15%) Frame = +3 Query: 195 KEPVKVTPKEPI--------FTCPVCWNK--LDEPATTM-CGHIFCTNCIKQAIQFQKKC 341 KE ++ P P+ CPVC L E + C H+F +CI ++ C Sbjct: 209 KEKIQALPTVPVTEEHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSC 268 Query: 342 PTCRKHLKMNN 374 P CRK L N Sbjct: 269 PVCRKSLTGQN 279
>DZIP3_HUMAN (Q86Y13) Ubiquitin ligase protein DZIP3 (EC 6.3.2.-) (DAZ-interacting| protein 3) (RNA-binding ubiquitin ligase of 138 kDa) (hRUL138) Length = 1208 Score = 36.2 bits (82), Expect = 0.081 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 2/82 (2%) Frame = +3 Query: 123 PVVNISPETGEGSSLQSKSAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPATTM--CGHIF 296 P+ + P T EG+S + + +EP C +C L ++ C H F Sbjct: 1123 PLTSQGPATWEGASNPDEE--EEEEEP-----------CVICHENLSPENLSVLPCAHKF 1169 Query: 297 CTNCIKQAIQFQKKCPTCRKHL 362 CI+ + Q CPTCR H+ Sbjct: 1170 HAQCIRPWLMQQGTCPTCRLHV 1191
>ZN364_HUMAN (Q9Y4L5) Zinc finger protein 364 (Rabring 7) (RING finger protein| 115) Length = 304 Score = 36.2 bits (82), Expect = 0.081 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 3/87 (3%) Frame = +3 Query: 111 QRVAPVVNISPETGEGSSLQSKSAGKTSKEPVKVTPKEPIFTCPVC---WNKLDEPATTM 281 Q + + N P + + S ++E V + CPVC + +E Sbjct: 191 QLLGQLENTGPPPADKEKITSLPTVTVTQEQVDMG-----LECPVCKEDYTVEEEVRQLP 245 Query: 282 CGHIFCTNCIKQAIQFQKKCPTCRKHL 362 C H F ++CI ++ CP CRK L Sbjct: 246 CNHFFHSSCIVPWLELHDTCPVCRKSL 272
>BRE1_CRYNE (Q5KBI0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 820 Score = 36.2 bits (82), Expect = 0.081 Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 1/55 (1%) Frame = +3 Query: 228 IFTCPVCWNKLDEPATTMCGHIFCTNCIKQAI-QFQKKCPTCRKHLKMNNFHRIY 389 + C C + C H FC C++Q I Q+KCP C + +Y Sbjct: 764 LLKCSCCEQNFKQQVIVKCMHTFCKQCLEQRIASRQRKCPACGLAFAKEDIQTLY 818
>ATL5P_ARATH (Q9FKX5) RING-H2 finger protein ATL5P| Length = 221 Score = 36.2 bits (82), Expect = 0.081 Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 5/78 (6%) Frame = +3 Query: 144 ETGEGSSLQSKSAGKTSKEPVKVTPKEP-IFTCPVCWNKLDEPATTM----CGHIFCTNC 308 +T L S + K V++T P I +C VC T C H+F C Sbjct: 146 DTAISKGLTGDSLNRIPK--VRITDTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPC 203 Query: 309 IKQAIQFQKKCPTCRKHL 362 I + ++ CP CR+HL Sbjct: 204 IDKWLRRHASCPLCRRHL 221
>SINA5_ARATH (Q8S3N1) Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia| homolog 5) Length = 309 Score = 36.2 bits (82), Expect = 0.081 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%) Frame = +3 Query: 171 SKSAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPATTMC--GHIFCTNCIKQAIQFQKKCP 344 +KS G + T + CPVC N + P C GH C+ C + +CP Sbjct: 24 TKSQGGATVVISPATSVYELLECPVCTNSM-YPPIHQCHNGHTLCSTCKSRV---HNRCP 79 Query: 345 TCRKHL 362 TCR+ L Sbjct: 80 TCRQEL 85
>R113A_HUMAN (O15541) RING finger protein 113A (Zinc finger protein 183)| Length = 343 Score = 36.2 bits (82), Expect = 0.081 Identities = 13/40 (32%), Positives = 17/40 (42%) Frame = +3 Query: 231 FTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTC 350 F C +C P T C H FC +C Q + +C C Sbjct: 260 FKCFICRQSFQNPVVTKCRHYFCESCALQHFRTTPRCYVC 299
>TRI56_HUMAN (Q9BRZ2) Tripartite motif protein 56 (RING finger protein 109)| Length = 755 Score = 36.2 bits (82), Expect = 0.081 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQ-AIQFQKKCPTCRK 356 C +C +L P T C H +C +C+ Q A + +CP CR+ Sbjct: 21 CKICLEQLRAPKTLPCLHTYCQDCLAQLADGGRVRCPECRE 61
>TRIM2_MOUSE (Q9ESN6) Tripartite motif protein 2 (Neural activity-related RING| finger protein) Length = 744 Score = 35.8 bits (81), Expect = 0.11 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 3/63 (4%) Frame = +3 Query: 177 SAGKTSKEPVKVTPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAI---QFQKKCPT 347 S G + PV + C +C + P C H FC C++ I CP Sbjct: 3 SEGASIPSPVVRQIDKQFLICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPV 62 Query: 348 CRK 356 CR+ Sbjct: 63 CRQ 65
>ATL3I_ARATH (Q7X843) RING-H2 finger protein ATL3I (YGHL1-C3HC4 RING fusion| protein) Length = 349 Score = 35.8 bits (81), Expect = 0.11 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Frame = +3 Query: 204 VKVTPKEPIFTCPVCWNKLDEP----ATTMCGHIFCTNCIKQAIQFQKKCPTCRKHLKMN 371 V ++ ++P F C VC N+ + +C H F +CI + CP CR+ L + Sbjct: 197 VTISLEQP-FDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSLSTS 255 Query: 372 N 374 N Sbjct: 256 N 256
>YWZ6_CAEEL (Q11096) Hypothetical RING finger protein C02B8.6 in chromosome X| Length = 347 Score = 35.8 bits (81), Expect = 0.11 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = +3 Query: 237 CPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQK-KCPTCRK 356 C +C N + P C H FC CIK +IQ C CR+ Sbjct: 5 CTICHNTPNRPVRLDCNHEFCYICIKGSIQNDMLNCAVCRR 45 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 97,403,557 Number of Sequences: 219361 Number of extensions: 2137270 Number of successful extensions: 6528 Number of sequences better than 10.0: 465 Number of HSP's better than 10.0 without gapping: 6110 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6459 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5767334219 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
