>EXOC6_ARATH (Q9LXX6) Probable exocyst complex component 6 (Exocyst complex|
            component Sec15)
          Length = 789

 Score =  188 bits (478), Expect = 1e-47
 Identities = 101/207 (48%), Positives = 138/207 (66%), Gaps = 5/207 (2%)
 Frame = +1

Query: 13   EFFTHHAAQLCGVPLRAVERGRRDFP----LRKSRDXXXXXXXXXXCSKVDEFMRQSDGV 180
            ++F  HAAQLCG+P R+VER +        L+ SRD           +K+DEFM+ ++ V
Sbjct: 545  DYFLRHAAQLCGIPSRSVERPQASLAAKVVLKTSRDAAYLALLNVVNTKLDEFMKLTENV 604

Query: 181  NWIADDPPAGGNEYANEVTIYLETLTSTAQQILPLPVLRRVLIAVLVHISERIIGLFLND 360
            NW  ++ P G +EY NEV IYLET+ STAQQILP+  L +V +  + HIS  I+  FL+D
Sbjct: 605  NWTTEEMPQGPHEYINEVVIYLETVMSTAQQILPMDALYKVGVGAIEHISNSIVSTFLSD 664

Query: 361  SVKRFSASAVTGIDTDLKMFESFA-ENISSLFLDSNQDSAASEMKSALVEPRQLVNLLMS 537
            S+KRF+A+AV+ I+ DL++ E+FA E   S  L  N+       +S LVE RQL+NLL S
Sbjct: 665  SIKRFNANAVSAINHDLRVIENFADERYHSSGL--NEIYKEGSFRSYLVEARQLINLLSS 722

Query: 538  NSPENFLNPVIREKSYSKLDYKKVAII 618
            + PENF+NPVIRE++Y+ LDYKKVA I
Sbjct: 723  SQPENFMNPVIRERNYNTLDYKKVATI 749

>SYT_ANAMM (Q5P9F6) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA|
           ligase) (ThrRS)
          Length = 636

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 388 VTGIDTDLKMFESFAENISSLFLDSN-QDSAASEMKSALVEP 510
           VTG +    MF   AE+I +LF+D N QD A    K   V+P
Sbjct: 20  VTGSEVASAMFPEIAESIVALFVDGNLQDLATPISKDGSVDP 61

>PCDGD_HUMAN (Q9Y5G3) Protocadherin gamma B1 precursor (PCDH-gamma-B1)|
          Length = 927

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = +1

Query: 352 LNDSVKRFSASAVTGIDTDLKMFESFAENISSLFLDSNQDS--AASEMKSALVEPRQLVN 525
           +ND+  RF A  +     DL++ ES    +    LDS QD+    + +K   + P Q  +
Sbjct: 123 INDNAPRFVAKGI-----DLEICESALPGVK-FSLDSAQDADVEGNSLKLYTINPNQYFS 176

Query: 526 LLMSNSPENFLNPVI 570
           L    SP+    PV+
Sbjct: 177 LSTKESPDGSKYPVL 191

>DPO3_STRP6 (Q5X9U8) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1465

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 25/87 (28%), Positives = 36/87 (41%)
 Frame = +1

Query: 352 LNDSVKRFSASAVTGIDTDLKMFESFAENISSLFLDSNQDSAASEMKSALVEPRQLVNLL 531
           L + VK+F A     +  D+   +   E+++  F+ S Q         ALVE     NL 
Sbjct: 142 LPNLVKQFEAFGFGTLTIDMVSDQEMTEHLTKNFVSSRQ---------ALVEKAVQDNLE 192

Query: 532 MSNSPENFLNPVIREKSYSKLDYKKVA 612
              S E  + PV       K DYK+ A
Sbjct: 193 AQKSLEAMMPPVEEATPAPKFDYKERA 219

>YKUF_BACSU (O34717) Hypothetical oxidoreductase ykuF (EC 1.-.-.-)|
          Length = 254

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = +1

Query: 412 KMFESFAENISSLFLDSNQDSAASEMKSALVEPRQLVNLLMSNSPENFLNP 564
           K  ++F   ++   +D   DSAAS+M    V+    ++ L++N+  NF+ P
Sbjct: 45  KEIQTFEGQVACFQMDVRSDSAASDMIKEAVKAFGRLDALINNAAGNFICP 95


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,474,330
Number of Sequences: 219361
Number of extensions: 1401677
Number of successful extensions: 3897
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3894
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5653129581
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)