ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags37d09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_184033.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2403 Score = 500 bits (252), Expect = e-138 Identities = 513/600 (85%) Strand = Plus / Plus Query: 13 gagttttttacacaccacgcagcgcaactgtgtggtgtgcctctacgtgcagtagagcgt 72 |||||||| ||| ||| ||||||||||||||||||||||| || |||||||| |||||| Sbjct: 1675 gagtttttcacaggccatgcagcgcaactgtgtggtgtgccacttcgtgcagtggagcgt 1734 Query: 73 gggcgacgtgactttccacttcgcaaatctcgtgatgctgcagaggcgcttctactgcgg 132 ||||| |||||||| ||||||||||| || ||||||||||||||||| ||| |||| ||| Sbjct: 1735 gggcggcgtgacttcccacttcgcaagtcccgtgatgctgcagaggcacttttactacgg 1794 Query: 133 ctattgtgttccaaggttgatgaattcatgcggcaatctgatggtgtcaactggatagct 192 || | |||||||||||||||| |||||| |||||||||||||||||| ||||| ||| Sbjct: 1795 cttctacgttccaaggttgatgagttcatggggcaatctgatggtgtcacttggatggct 1854 Query: 193 gatgacccgcctgctgggggcaatgagtatgccaatgaggtcactatatatctggagact 252 ||||| || || ||||| || ||||||||||| || ||||||| ||| ||||| ||||| Sbjct: 1855 gatgatccaccagctggtggaaatgagtatgcaaacgaggtcattatctatctcgagaca 1914 Query: 253 cttacttcaactgctcaacagatccttcctcttccagtgctccgtcgtgttcttattgca 312 || ||||||||||| || |||||||| |||||||| |||||||| ||||| ||| | ||| Sbjct: 1915 ctcacttcaactgcacagcagatcctccctcttccggtgctccgccgtgtccttgtggca 1974 Query: 313 gttcttgtgcatatctctgagaggattattggtctattcttgaatgactcagtcaagcgg 372 || |||| || ||||||||||||||| | || || ||||||||||| |||||||||||| Sbjct: 1975 gtgcttgcccacatctctgagaggattgtcgggctcttcttgaatgattcagtcaagcgg 2034 Query: 373 tttagtgctagtgcggttaccggtatagatactgatcttaaaatgtttgagtcattcgca 432 |||| ||||||||| || ||||| || ||||| ||||| |||||||| ||| | || | Sbjct: 2035 tttaatgctagtgcagtcaccggaattgataccgatctcaaaatgttcgaggcgtttggg 2094 Query: 433 gagaacatatcgagcttgttcctggactctaatcaggattctgcagcaagtgaaatgaag 492 |||| ||| || || ||||| |||||||| |||| || |||||||||| |||||||||| Sbjct: 2095 gagagcatgtccagtttgtttgtggactctgatcaagagtctgcagcaaatgaaatgaag 2154 Query: 493 tctgcactggtggagccgaggcagttggtgaatcttcttatgagcaacagcccagagaac 552 ||||||| |||||| |||| ||| | |||||||||||||||||||||||||||||||| Sbjct: 2155 gctgcacttgtggaggcgagacagctagtgaatcttcttatgagcaacagcccagagaat 2214 Query: 553 ttccttaacccagtgatccgtgagaagagctacagtaagcttgattacaaaaaagtggca 612 |||||||| ||||||||||||||||||||||| | ||||||||||||||||| |||||| Sbjct: 2215 ttccttaatccagtgatccgtgagaagagctataacaagcttgattacaaaaaggtggca 2274
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 500 bits (252), Expect = e-138 Identities = 513/600 (85%) Strand = Plus / Plus Query: 13 gagttttttacacaccacgcagcgcaactgtgtggtgtgcctctacgtgcagtagagcgt 72 |||||||| ||| ||| ||||||||||||||||||||||| || |||||||| |||||| Sbjct: 14044222 gagtttttcacaggccatgcagcgcaactgtgtggtgtgccacttcgtgcagtggagcgt 14044281 Query: 73 gggcgacgtgactttccacttcgcaaatctcgtgatgctgcagaggcgcttctactgcgg 132 ||||| |||||||| ||||||||||| || ||||||||||||||||| ||| |||| ||| Sbjct: 14044282 gggcggcgtgacttcccacttcgcaagtcccgtgatgctgcagaggcacttttactacgg 14044341 Query: 133 ctattgtgttccaaggttgatgaattcatgcggcaatctgatggtgtcaactggatagct 192 || | |||||||||||||||| |||||| |||||||||||||||||| ||||| ||| Sbjct: 14044342 cttctacgttccaaggttgatgagttcatggggcaatctgatggtgtcacttggatggct 14044401 Query: 193 gatgacccgcctgctgggggcaatgagtatgccaatgaggtcactatatatctggagact 252 ||||| || || ||||| || ||||||||||| || ||||||| ||| ||||| ||||| Sbjct: 14044402 gatgatccaccagctggtggaaatgagtatgcaaacgaggtcattatctatctcgagaca 14044461 Query: 253 cttacttcaactgctcaacagatccttcctcttccagtgctccgtcgtgttcttattgca 312 || ||||||||||| || |||||||| |||||||| |||||||| ||||| ||| | ||| Sbjct: 14044462 ctcacttcaactgcacagcagatcctccctcttccggtgctccgccgtgtccttgtggca 14044521 Query: 313 gttcttgtgcatatctctgagaggattattggtctattcttgaatgactcagtcaagcgg 372 || |||| || ||||||||||||||| | || || ||||||||||| |||||||||||| Sbjct: 14044522 gtgcttgcccacatctctgagaggattgtcgggctcttcttgaatgattcagtcaagcgg 14044581 Query: 373 tttagtgctagtgcggttaccggtatagatactgatcttaaaatgtttgagtcattcgca 432 |||| ||||||||| || ||||| || ||||| ||||| |||||||| ||| | || | Sbjct: 14044582 tttaatgctagtgcagtcaccggaattgataccgatctcaaaatgttcgaggcgtttggg 14044641 Query: 433 gagaacatatcgagcttgttcctggactctaatcaggattctgcagcaagtgaaatgaag 492 |||| ||| || || ||||| |||||||| |||| || |||||||||| |||||||||| Sbjct: 14044642 gagagcatgtccagtttgtttgtggactctgatcaagagtctgcagcaaatgaaatgaag 14044701 Query: 493 tctgcactggtggagccgaggcagttggtgaatcttcttatgagcaacagcccagagaac 552 ||||||| |||||| |||| ||| | |||||||||||||||||||||||||||||||| Sbjct: 14044702 gctgcacttgtggaggcgagacagctagtgaatcttcttatgagcaacagcccagagaat 14044761 Query: 553 ttccttaacccagtgatccgtgagaagagctacagtaagcttgattacaaaaaagtggca 612 |||||||| ||||||||||||||||||||||| | ||||||||||||||||| |||||| Sbjct: 14044762 ttccttaatccagtgatccgtgagaagagctataacaagcttgattacaaaaaggtggca 14044821
>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1051E10 Length = 207782 Score = 500 bits (252), Expect = e-138 Identities = 513/600 (85%) Strand = Plus / Plus Query: 13 gagttttttacacaccacgcagcgcaactgtgtggtgtgcctctacgtgcagtagagcgt 72 |||||||| ||| ||| ||||||||||||||||||||||| || |||||||| |||||| Sbjct: 204524 gagtttttcacaggccatgcagcgcaactgtgtggtgtgccacttcgtgcagtggagcgt 204583 Query: 73 gggcgacgtgactttccacttcgcaaatctcgtgatgctgcagaggcgcttctactgcgg 132 ||||| |||||||| ||||||||||| || ||||||||||||||||| ||| |||| ||| Sbjct: 204584 gggcggcgtgacttcccacttcgcaagtcccgtgatgctgcagaggcacttttactacgg 204643 Query: 133 ctattgtgttccaaggttgatgaattcatgcggcaatctgatggtgtcaactggatagct 192 || | |||||||||||||||| |||||| |||||||||||||||||| ||||| ||| Sbjct: 204644 cttctacgttccaaggttgatgagttcatggggcaatctgatggtgtcacttggatggct 204703 Query: 193 gatgacccgcctgctgggggcaatgagtatgccaatgaggtcactatatatctggagact 252 ||||| || || ||||| || ||||||||||| || ||||||| ||| ||||| ||||| Sbjct: 204704 gatgatccaccagctggtggaaatgagtatgcaaacgaggtcattatctatctcgagaca 204763 Query: 253 cttacttcaactgctcaacagatccttcctcttccagtgctccgtcgtgttcttattgca 312 || ||||||||||| || |||||||| |||||||| |||||||| ||||| ||| | ||| Sbjct: 204764 ctcacttcaactgcacagcagatcctccctcttccggtgctccgccgtgtccttgtggca 204823 Query: 313 gttcttgtgcatatctctgagaggattattggtctattcttgaatgactcagtcaagcgg 372 || |||| || ||||||||||||||| | || || ||||||||||| |||||||||||| Sbjct: 204824 gtgcttgcccacatctctgagaggattgtcgggctcttcttgaatgattcagtcaagcgg 204883 Query: 373 tttagtgctagtgcggttaccggtatagatactgatcttaaaatgtttgagtcattcgca 432 |||| ||||||||| || ||||| || ||||| ||||| |||||||| ||| | || | Sbjct: 204884 tttaatgctagtgcagtcaccggaattgataccgatctcaaaatgttcgaggcgtttggg 204943 Query: 433 gagaacatatcgagcttgttcctggactctaatcaggattctgcagcaagtgaaatgaag 492 |||| ||| || || ||||| |||||||| |||| || |||||||||| |||||||||| Sbjct: 204944 gagagcatgtccagtttgtttgtggactctgatcaagagtctgcagcaaatgaaatgaag 205003 Query: 493 tctgcactggtggagccgaggcagttggtgaatcttcttatgagcaacagcccagagaac 552 ||||||| |||||| |||| ||| | |||||||||||||||||||||||||||||||| Sbjct: 205004 gctgcacttgtggaggcgagacagctagtgaatcttcttatgagcaacagcccagagaat 205063 Query: 553 ttccttaacccagtgatccgtgagaagagctacagtaagcttgattacaaaaaagtggca 612 |||||||| ||||||||||||||||||||||| | ||||||||||||||||| |||||| Sbjct: 205064 ttccttaatccagtgatccgtgagaagagctataacaagcttgattacaaaaaggtggca 205123
>dbj|AP003258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0463A02 Length = 151041 Score = 500 bits (252), Expect = e-138 Identities = 513/600 (85%) Strand = Plus / Plus Query: 13 gagttttttacacaccacgcagcgcaactgtgtggtgtgcctctacgtgcagtagagcgt 72 |||||||| ||| ||| ||||||||||||||||||||||| || |||||||| |||||| Sbjct: 119967 gagtttttcacaggccatgcagcgcaactgtgtggtgtgccacttcgtgcagtggagcgt 120026 Query: 73 gggcgacgtgactttccacttcgcaaatctcgtgatgctgcagaggcgcttctactgcgg 132 ||||| |||||||| ||||||||||| || ||||||||||||||||| ||| |||| ||| Sbjct: 120027 gggcggcgtgacttcccacttcgcaagtcccgtgatgctgcagaggcacttttactacgg 120086 Query: 133 ctattgtgttccaaggttgatgaattcatgcggcaatctgatggtgtcaactggatagct 192 || | |||||||||||||||| |||||| |||||||||||||||||| ||||| ||| Sbjct: 120087 cttctacgttccaaggttgatgagttcatggggcaatctgatggtgtcacttggatggct 120146 Query: 193 gatgacccgcctgctgggggcaatgagtatgccaatgaggtcactatatatctggagact 252 ||||| || || ||||| || ||||||||||| || ||||||| ||| ||||| ||||| Sbjct: 120147 gatgatccaccagctggtggaaatgagtatgcaaacgaggtcattatctatctcgagaca 120206 Query: 253 cttacttcaactgctcaacagatccttcctcttccagtgctccgtcgtgttcttattgca 312 || ||||||||||| || |||||||| |||||||| |||||||| ||||| ||| | ||| Sbjct: 120207 ctcacttcaactgcacagcagatcctccctcttccggtgctccgccgtgtccttgtggca 120266 Query: 313 gttcttgtgcatatctctgagaggattattggtctattcttgaatgactcagtcaagcgg 372 || |||| || ||||||||||||||| | || || ||||||||||| |||||||||||| Sbjct: 120267 gtgcttgcccacatctctgagaggattgtcgggctcttcttgaatgattcagtcaagcgg 120326 Query: 373 tttagtgctagtgcggttaccggtatagatactgatcttaaaatgtttgagtcattcgca 432 |||| ||||||||| || ||||| || ||||| ||||| |||||||| ||| | || | Sbjct: 120327 tttaatgctagtgcagtcaccggaattgataccgatctcaaaatgttcgaggcgtttggg 120386 Query: 433 gagaacatatcgagcttgttcctggactctaatcaggattctgcagcaagtgaaatgaag 492 |||| ||| || || ||||| |||||||| |||| || |||||||||| |||||||||| Sbjct: 120387 gagagcatgtccagtttgtttgtggactctgatcaagagtctgcagcaaatgaaatgaag 120446 Query: 493 tctgcactggtggagccgaggcagttggtgaatcttcttatgagcaacagcccagagaac 552 ||||||| |||||| |||| ||| | |||||||||||||||||||||||||||||||| Sbjct: 120447 gctgcacttgtggaggcgagacagctagtgaatcttcttatgagcaacagcccagagaat 120506 Query: 553 ttccttaacccagtgatccgtgagaagagctacagtaagcttgattacaaaaaagtggca 612 |||||||| ||||||||||||||||||||||| | ||||||||||||||||| |||||| Sbjct: 120507 ttccttaatccagtgatccgtgagaagagctataacaagcttgattacaaaaaggtggca 120566
>dbj|AK102963.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115I11, full insert sequence Length = 3046 Score = 492 bits (248), Expect = e-136 Identities = 512/600 (85%) Strand = Plus / Plus Query: 13 gagttttttacacaccacgcagcgcaactgtgtggtgtgcctctacgtgcagtagagcgt 72 |||||||| ||| ||| ||||||||||||||||||||||| || |||||||| |||||| Sbjct: 1746 gagtttttcacaggccatgcagcgcaactgtgtggtgtgccacttcgtgcagtggagcgt 1805 Query: 73 gggcgacgtgactttccacttcgcaaatctcgtgatgctgcagaggcgcttctactgcgg 132 ||||| |||||||| ||||||||||| || ||||||||||||||||| ||| |||| ||| Sbjct: 1806 gggcggcgtgacttcccacttcgcaagtcccgtgatgctgcagaggcacttttactacgg 1865 Query: 133 ctattgtgttccaaggttgatgaattcatgcggcaatctgatggtgtcaactggatagct 192 || | |||||||||||||||| |||||| |||||||||||||||||| ||||| || Sbjct: 1866 cttctacgttccaaggttgatgagttcatggggcaatctgatggtgtcacttggatgact 1925 Query: 193 gatgacccgcctgctgggggcaatgagtatgccaatgaggtcactatatatctggagact 252 ||||| || || ||||| || ||||||||||| || ||||||| ||| ||||| ||||| Sbjct: 1926 gatgatccaccagctggtggaaatgagtatgcaaacgaggtcattatctatctcgagaca 1985 Query: 253 cttacttcaactgctcaacagatccttcctcttccagtgctccgtcgtgttcttattgca 312 || ||||||||||| || |||||||| |||||||| |||||||| ||||| ||| | ||| Sbjct: 1986 ctcacttcaactgcacagcagatcctccctcttccggtgctccgccgtgtccttgtggca 2045 Query: 313 gttcttgtgcatatctctgagaggattattggtctattcttgaatgactcagtcaagcgg 372 || |||| || ||||||||||||||| | || || ||||||||||| |||||||||||| Sbjct: 2046 gtgcttgcccacatctctgagaggattgtcgggctcttcttgaatgattcagtcaagcgg 2105 Query: 373 tttagtgctagtgcggttaccggtatagatactgatcttaaaatgtttgagtcattcgca 432 |||| ||||||||| || ||||| || ||||| ||||| |||||||| ||| | || | Sbjct: 2106 tttaatgctagtgcagtcaccggaattgataccgatctcaaaatgttcgaggcgtttggg 2165 Query: 433 gagaacatatcgagcttgttcctggactctaatcaggattctgcagcaagtgaaatgaag 492 |||| ||| || || ||||| |||||||| |||| || |||||||||| |||||||||| Sbjct: 2166 gagagcatgtccagtttgtttgtggactctgatcaagagtctgcagcaaatgaaatgaag 2225 Query: 493 tctgcactggtggagccgaggcagttggtgaatcttcttatgagcaacagcccagagaac 552 ||||||| |||||| |||| ||| | |||||||||||||||||||||||||||||||| Sbjct: 2226 gctgcacttgtggaggcgagacagctagtgaatcttcttatgagcaacagcccagagaat 2285 Query: 553 ttccttaacccagtgatccgtgagaagagctacagtaagcttgattacaaaaaagtggca 612 |||||||| ||||||||||||||||||||||| | ||||||||||||||||| |||||| Sbjct: 2286 ttccttaatccagtgatccgtgagaagagctataacaagcttgattacaaaaaggtggca 2345
>gb|BT017497.1| Zea mays clone EL01N0413G05.c mRNA sequence Length = 1226 Score = 202 bits (102), Expect = 1e-48 Identities = 342/422 (81%) Strand = Plus / Plus Query: 163 cggcaatctgatggtgtcaactggatagctgatgacccgcctgctgggggcaatgagtat 222 ||||||||||||||||| |||||||| ||||||||| | ||| |||| |||||||||||| Sbjct: 1 cggcaatctgatggtgtgaactggatggctgatgacgctcctcctggcggcaatgagtat 60 Query: 223 gccaatgaggtcactatatatctggagactcttacttcaactgctcaacagatccttcct 282 ||||| ||||||| || || || ||||| || || |||||||| || ||||||||||| Sbjct: 61 gccaacgaggtcatcatctaccttgagacgctcacatcaactgcacagcagatccttccc 120 Query: 283 cttccagtgctccgtcgtgttcttattgcagttcttgtgcatatctctgagaggattatt 342 ||||| |||||||| ||||| ||| | ||||| |||| || |||||||| ||| | ||| Sbjct: 121 cttcccgtgctccgccgtgtacttgtggcagtgcttgcccacatctctgaaagggtgatt 180 Query: 343 ggtctattcttgaatgactcagtcaagcggtttagtgctagtgcggttaccggtatagat 402 | || |||||||| || ||||| |||||| | | ||| | ||||| || || |||||| Sbjct: 181 gagctcttcttgaacgattcagtgaagcgggtcaatgccaatgcgggcactggaatagat 240 Query: 403 actgatcttaaaatgtttgagtcattcgcagagaacatatcgagcttgttcctggactct 462 |||||||| |||||||||||| | || |||||| ||| || ||| ||||| ||||||| Sbjct: 241 actgatctcaaaatgtttgagacgtttgcagagggcatgtctagcctgttcgtggactca 300 Query: 463 aatcaggattctgcagcaagtgaaatgaagtctgcactggtggagccgaggcagttggtg 522 || || |||||| || |||||||||| |||||| ||||| | |||||| | ||| Sbjct: 301 gggcaagaatctgcaaaaaatgaaatgaagggtgcacttgtggaagcaaggcagctagtg 360 Query: 523 aatcttcttatgagcaacagcccagagaacttccttaacccagtgatccgtgagaagagc 582 ||||||||||||||||| || ||||||| ||||| || |||||||| ||||| |||||| Sbjct: 361 aatcttcttatgagcaatagtccagagactttcctaaatccagtgattcgtgaaaagagc 420 Query: 583 ta 584 || Sbjct: 421 ta 422
>gb|AY105441.1| Zea mays PCO072816 mRNA sequence Length = 615 Score = 143 bits (72), Expect = 8e-31 Identities = 186/224 (83%) Strand = Plus / Plus Query: 361 tcagtcaagcggtttagtgctagtgcggttaccggtatagatactgatcttaaaatgttt 420 ||||| |||||||| | ||| | |||||| || || |||||||||||||| ||||||||| Sbjct: 7 tcagtgaagcggttcaatgccaatgcggtcactggaatagatactgatctcaaaatgttt 66 Query: 421 gagtcattcgcagagaacatatcgagcttgttcctggactctaatcaggattctgcagca 480 ||| | || |||||| ||| || ||| ||||| ||||||| ||| || |||||| | Sbjct: 67 gagacgtttgcagagggcatgtctagcctgttcgtggactcaggtcaagaatctgcaaaa 126 Query: 481 agtgaaatgaagtctgcactggtggagccgaggcagttggtgaatcttcttatgagcaac 540 | |||||||||| ||||||| ||||| | |||||| | |||||||||||||||||||| Sbjct: 127 aatgaaatgaaggctgcactagtggaagcaaggcagctagtgaatcttcttatgagcaat 186 Query: 541 agcccagagaacttccttaacccagtgatccgtgagaagagcta 584 || |||||||| ||||| || ||||||||||||||||||||||| Sbjct: 187 agtccagagaatttcctaaatccagtgatccgtgagaagagcta 230
>gb|AC022021.10| Homo sapiens chromosome 10 clone RP11-351M16, complete sequence Length = 190202 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 540 cagcccagagaacttccttaa 560 ||||||||||||||||||||| Sbjct: 46388 cagcccagagaacttccttaa 46368
>gb|AC007773.1|AC007773 Homo sapiens chromosome 19, BAC 275282 (CIT-B-325L16), complete sequence Length = 180316 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 548 agaacttccttaacccagtga 568 ||||||||||||||||||||| Sbjct: 141778 agaacttccttaacccagtga 141758
>ref|XM_324393.1| Neurospora crassa OR74A hypothetical protein (NCU05037.1) partial mRNA Length = 1029 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 543 cccagagaacttccttaacccagt 566 |||||||||||||||||| ||||| Sbjct: 469 cccagagaacttccttaaaccagt 446
>ref|XM_951252.1| Neurospora crassa OR74A hypothetical protein (NCU05037.1) partial mRNA Length = 1029 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 543 cccagagaacttccttaacccagt 566 |||||||||||||||||| ||||| Sbjct: 469 cccagagaacttccttaaaccagt 446
>gb|AC107701.8| Mus musculus chromosome 3, clone RP23-49O22, complete sequence Length = 241986 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ttcctcttccagtgctccgt 297 |||||||||||||||||||| Sbjct: 99629 ttcctcttccagtgctccgt 99610
>emb|AL365434.13| Human DNA sequence from clone RP11-236B18 on chromosome 10 Contains three novel genes and a DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 18 (Myc-regulated) (DDX18) pseudogene, complete sequence Length = 158357 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 ccttcctcttccagtgctcc 295 |||||||||||||||||||| Sbjct: 150919 ccttcctcttccagtgctcc 150900
>gb|AC157360.9| Mus musculus chromosome 8, clone RP23-420E22, complete sequence Length = 195633 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttcttgaatgactcagtcaa 368 |||||||||||||||||||| Sbjct: 107818 ttcttgaatgactcagtcaa 107837
>gb|AC097062.2| Homo sapiens chromosome 1 clone RP11-428D12, complete sequence Length = 185700 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 tatcgagcttgttcctggac 459 |||||||||||||||||||| Sbjct: 55763 tatcgagcttgttcctggac 55782
>gb|AC090814.2| Homo sapiens chromosome 8, clone RP11-1152K2, complete sequence Length = 142938 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 tcttaaaatgtttgagtcat 427 |||||||||||||||||||| Sbjct: 102049 tcttaaaatgtttgagtcat 102068
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 caagcggtttagtgctagtg 385 |||||||||||||||||||| Sbjct: 2436888 caagcggtttagtgctagtg 2436907
>emb|BX842599.1| Neurospora crassa DNA linkage group II BAC clone B10A24 Length = 85694 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 543 cccagagaacttccttaacccagt 566 |||||||||||||||||| ||||| Sbjct: 24532 cccagagaacttccttaaaccagt 24509
>emb|Z81555.1|CEF58E10 Caenorhabditis elegans Cosmid F58E10, complete sequence Length = 32243 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 597 ttacaaaaaagtggcaatta 616 |||||||||||||||||||| Sbjct: 12225 ttacaaaaaagtggcaatta 12206
>emb|AL662821.9| Mouse DNA sequence from clone RP23-445H21 on chromosome 11, complete sequence Length = 63424 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gcaatctgatggtgtcaact 184 |||||||||||||||||||| Sbjct: 20992 gcaatctgatggtgtcaact 21011 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,874,897 Number of Sequences: 3902068 Number of extensions: 4874897 Number of successful extensions: 96939 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96859 Number of HSP's gapped (non-prelim): 73 length of query: 620 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 597 effective length of database: 17,143,297,704 effective search space: 10234548729288 effective search space used: 10234548729288 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
