>MSAP_HUMAN (Q9Y2B0) MIR-interacting saposin-like protein precursor|
           (Transmembrane protein 4) (Putative secreted protein
           ZSIG9)
          Length = 182

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 6/147 (4%)
 Frame = +1

Query: 19  CAACKAVAAELEIGISSEKPRNHLDLRN-RLNSKGQREGKVIDYRVSELRIVELLDDLCD 195
           C AC+A+  ELE  I+   P+  + + + R+N  G +    + Y  SE  + ELL+++CD
Sbjct: 28  CGACRALVDELEWEIAQVDPKKTIQMGSFRINPDGSQSVVEVPYARSEAHLTELLEEICD 87

Query: 196 KMQDYTLQKSES-GEKEWVKVA--NWSSFQTDKKAAA--RAHSKNLSSYCGRLLEETEDE 360
           +M++Y  Q   S   K +V+V   N  S + D +        S  L   C  ++EE EDE
Sbjct: 88  RMKEYGEQIDPSTHRKNYVRVVGRNGESSELDLQGIRIDSDISGTLKFACESIVEEYEDE 147

Query: 361 LAEWIKTSSAESGNVSQALCQDISKHC 441
           L E+    S E+ NV   LC   +  C
Sbjct: 148 LIEFF---SREADNVKDKLCSKRTDLC 171

>MSAP_MOUSE (Q9QXT0) MIR-interacting saposin-like protein precursor|
           (Transmembrane protein 4) (Putative secreted protein
           ZSIG9)
          Length = 182

 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 6/147 (4%)
 Frame = +1

Query: 19  CAACKAVAAELEIGISSEKPRNHLDLRN-RLNSKGQREGKVIDYRVSELRIVELLDDLCD 195
           C AC+A+  ELE  I+   P+  + + + R+N  G +    + Y  SE  + ELL+++CD
Sbjct: 28  CGACRALVDELEWEIARVDPKKTIQMGSFRINPDGSQSVVEVPYARSEAHLTELLEEVCD 87

Query: 196 KMQDYTLQKSES-GEKEWVKVA--NWSSFQTDKKAAA--RAHSKNLSSYCGRLLEETEDE 360
           +M++Y  Q   S   K +V+V   N  S + D +        S  L   C  ++EE EDE
Sbjct: 88  RMKEYGEQIDPSTHRKNYVRVVSRNGESSELDLQGIRIDSDISGTLKFACESIVEEYEDE 147

Query: 361 LAEWIKTSSAESGNVSQALCQDISKHC 441
           L E+    S E+ NV   LC   +  C
Sbjct: 148 LIEFF---SREADNVKDKLCSKRTDLC 171

>TRIP4_HUMAN (Q15650) Activating signal cointegrator 1 (ASC-1) (Thyroid|
           receptor-interacting protein 4) (TRIP-4)
          Length = 581

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 26/122 (21%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
 Frame = +1

Query: 40  AAELEIGISSEKPRNHLDLRNRLNSKGQREGKVIDYRVSELRIVELLDDLCD-------- 195
           + +++I      P   L +++ L    + + K++++  + +R  +++DD  D        
Sbjct: 237 SGKVDISTKDLLPHQELRIKSGLEKAIKHKDKLLEFDRTSIRRTQVIDDESDYFASDSNQ 296

Query: 196 ---KMQDYTLQKSESGEKEWVKVANWSSFQTDKKAAARAHSKNLSSYCGRLLEETEDELA 366
              K++  TLQK E   +E              + A+R   K    + GR + E E+ LA
Sbjct: 297 WLSKLERETLQKREEELRE-------------LRHASRLSKKVTIDFAGRKILEEENSLA 343

Query: 367 EW 372
           E+
Sbjct: 344 EY 345

>YHZ5_YEAST (P38881) Hypothetical 36.4 kDa protein in EGD2-SUN1 intergenic|
           region
          Length = 321

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = +1

Query: 94  LRNRLNSKGQREGKVIDYRVSELRIVELLDDLCD-KMQDYTLQKSESGEKEWVKVANWSS 270
           +R  L  +G  E + +DY +  +  ++ L +L D K +  T ++ ++GE  W KV N+ S
Sbjct: 27  VRKHLERQGWIEPQKVDYEL--IFTIDRLKNLVDNKREALTAEQPDAGELSWRKVFNFIS 84

Query: 271 FQTDK 285
            Q+ +
Sbjct: 85  RQSSE 89

>PGK_SULTO (Q971K1) Phosphoglycerate kinase (EC 2.7.2.3)|
          Length = 415

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 20/86 (23%), Positives = 39/86 (45%)
 Frame = +1

Query: 172 ELLDDLCDKMQDYTLQKSESGEKEWVKVANWSSFQTDKKAAARAHSKNLSSYCGRLLEET 351
           +LLDD   K    T+++    +   V +++      D   +   HSK LS Y GR +E  
Sbjct: 38  KLLDDSRIKAHAETIRELLDKQNSVVIISHQGRPGDDDFISLEEHSKILSKYVGREIEFV 97

Query: 352 EDELAEWIKTSSAESGNVSQALCQDI 429
           +D +  + +   ++ G     L +++
Sbjct: 98  DDVIGPYAREKISKLGKGEAILLENV 123

>MYH11_MOUSE (O08638) Myosin-11 (Myosin heavy chain, smooth muscle isoform)|
            (SMMHC)
          Length = 1972

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
 Frame = +1

Query: 67   SEKPRNHLDLRNRLNSKGQREGKV---IDYRVSELRIVELLDDLCDKMQDY--TLQKSES 231
            S K R   D RN L  +   E +    ++  VS L I   L D   K+QD+  T++  E 
Sbjct: 1335 STKLRQLEDERNSLQDQLDEEMEAKQNLERHVSTLNIQ--LSDSKKKLQDFASTIEVMEE 1392

Query: 232  GEKEWVKVANWSSFQTDKKAAARAHSKNLSSYCGRLLEETED 357
            G+K   K     S Q ++KAAA      L     RL +E +D
Sbjct: 1393 GKKRLQKEMEGLSQQYEEKAAA---YDKLEKTKNRLQQELDD 1431

>IF2_PARUW (Q6MD64) Translation initiation factor IF-2|
          Length = 920

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 25/94 (26%), Positives = 40/94 (42%)
 Frame = +1

Query: 175 LLDDLCDKMQDYTLQKSESGEKEWVKVANWSSFQTDKKAAARAHSKNLSSYCGRLLEETE 354
           L   L  K ++ + QKS S  K   K       +  K+ A R  +++ S++     +++ 
Sbjct: 23  LKSKLAKKKEEESTQKS-SAAKSTSKTTKTEVEELPKEEAPRIRARSKSAFAEAPADQSS 81

Query: 355 DELAEWIKTSSAESGNVSQALCQDISKHCQSTSA 456
            E+ E IKTS  E     +A      K    TSA
Sbjct: 82  KEITEEIKTSQDEESISREAAKVIEEKSRMKTSA 115

>Y2353_STAES (Q8CQQ7) Protein SE_2353|
          Length = 300

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 29/143 (20%), Positives = 59/143 (41%), Gaps = 5/143 (3%)
 Frame = +1

Query: 46  ELEIGISSEKPRNHLDLRNRLNSK-----GQREGKVIDYRVSELRIVELLDDLCDKMQDY 210
           EL+  I+++   N   L++  NS+      Q +      + +EL+  EL           
Sbjct: 133 ELQTDITTKLDSNAQSLKSIQNSQEAIQSAQEQQSKDIAKANELKDSELRSHFDSMSNSA 192

Query: 211 TLQKSESGEKEWVKVANWSSFQTDKKAAARAHSKNLSSYCGRLLEETEDELAEWIKTSSA 390
           ++ +S    +      + S    D  +++ + S +++S      +   +  +       +
Sbjct: 193 SISQSNVASQSTTASLSQSESANDSMSSSLSESNSITSESNTNSKSEIESKSTSTSEFLS 252

Query: 391 ESGNVSQALCQDISKHCQSTSAT 459
           ESG+VS +   +   H QSTSAT
Sbjct: 253 ESGSVSNSEKSESISHSQSTSAT 275

>NCAP_LASSG (P04935) Nucleocapsid protein (Nucleoprotein)|
          Length = 570

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
 Frame = +1

Query: 91  DLRNRLNSKGQREGKVIDYRVS-------ELRIVELLDDLCDKMQDYTLQKSESGEKE 243
           D+R  L S+G+R+ K+ID  +S       E  + +   DLC       ++K + G KE
Sbjct: 467 DIRKLLESQGRRDIKLIDITLSKADSRKFENAVWDQFKDLCHMHTGVVVEKKKRGGKE 524


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,639,489
Number of Sequences: 219361
Number of extensions: 1722281
Number of successful extensions: 4367
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4363
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)