ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags36o01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK109401.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G01, full insert sequence Length = 1113 Score = 392 bits (198), Expect = e-106 Identities = 444/526 (84%) Strand = Plus / Plus Query: 45 ggggaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgt 104 ||||||||||||| || || || ||||| || ||||| ||||||||||||||||| || | Sbjct: 101 ggggaatcatgagtggtacgggatacacagttgaagttactaacctgtcaagcagggcat 160 Query: 105 ctgaaaatgatcttcatgagttcttctcattctctggacctattgagcatatagacctta 164 |||||| |||||||||||||||||| |||||||||||| | |||||||||||||| |||| Sbjct: 161 ctgaaagtgatcttcatgagttcttttcattctctggagcgattgagcatatagaactta 220 Query: 165 tcagatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttgg 224 |||||||||||| ||||||||| |||||||||||||| ||||||||||||||| |||||| Sbjct: 221 tcagatcaggagaatatggttctactgcttatgtgacattcaaggaaccctattccttgg 280 Query: 225 aaactgcagtattgttgagtggggctaccattgtggatcagccggtgtgcatatctcgtt 284 |||||||||||||| | ||||||||||| |||||||||||||| || || ||| |||| | Sbjct: 281 aaactgcagtattgctcagtggggctactattgtggatcagccagtttgtatagctcgct 340 Query: 285 ggggacagcctgatgagcctagtaatttctgggacaggccaacttggcaggtcgaggagg 344 ||||||||||| |||| || ||||||||||||| |||| |||| | ||||||| Sbjct: 341 ggggacagcctaatgaaccatacaatttctgggacacaccaaattggtatacagaggagg 400 Query: 345 aaattgaatatagggactaccaatcatgccagttcaacgccactccacaggaggctttga 404 |||||||||| ||| ||| ||| ||||||||||||| |||||||||| || ||||||| Sbjct: 401 aaattgaatacaggacctatcaaacatgccagttcaattccactccacaagaagctttga 460 Query: 405 cagtggctcaggacgtcgtgaagacgatgctgtcgaggggatacatactgagcaaggacg 464 | | |||||||| || |||||||| ||||| | ||||||||| |||| |||||||| | Sbjct: 461 cgattgctcaggatgttgtgaagacaatgctagcaaggggatacgtactcagcaaggatg 520 Query: 465 cattgtccagggctagagctttcgacgagtcccaccagttatctggatctgcggcagcaa 524 || || ||||||||||||| || || |||||||| ||| || | | |||| ||||| | Sbjct: 521 cactggccagggctagagcctttgatgagtcccatcaggtaacagcgactgccgcagcca 580 Query: 525 aggctgcagagctgagcaggaggctcggcctgactgacagagtcag 570 ||||||| |||||||||| |||| | ||||| || ||||| ||||| Sbjct: 581 aggctgcggagctgagcaagaggattggcctaaccgacagggtcag 626 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 550 cggcctgactgacagagtcagtgctggtgttggcgcaatcagatcagtggacgagacata 609 |||||| || ||||| ||||| || |||||||| ||||||||||| ||||| |||||||| Sbjct: 627 cggcctaaccgacagggtcagcgccggtgttggtgcaatcagatcggtggatgagacata 686 Query: 610 ccatgttaccgagacg 625 ||| || |||||||| Sbjct: 687 ccacgtatccgagacg 702
>ref|XM_474067.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 756 Score = 379 bits (191), Expect = e-102 Identities = 425/503 (84%) Strand = Plus / Plus Query: 68 tacactgtggaagtcactaacctgtcaagcagcgcgtctgaaaatgatcttcatgagttc 127 ||||| || ||||| ||||||||||||||||| || ||||||| |||||||||||||||| Sbjct: 16 tacacagttgaagttactaacctgtcaagcagggcatctgaaagtgatcttcatgagttc 75 Query: 128 ttctcattctctggacctattgagcatatagaccttatcagatcaggaggatatggttca 187 || |||||||||||| | |||||||||||||| |||||||||||||||| ||||||||| Sbjct: 76 ttttcattctctggagcgattgagcatatagaacttatcagatcaggagaatatggttct 135 Query: 188 actgcttatgtgactttcaaggaaccctatgccttggaaactgcagtattgttgagtggg 247 |||||||||||||| ||||||||||||||| |||||||||||||||||||| | |||||| Sbjct: 136 actgcttatgtgacattcaaggaaccctattccttggaaactgcagtattgctcagtggg 195 Query: 248 gctaccattgtggatcagccggtgtgcatatctcgttggggacagcctgatgagcctagt 307 ||||| |||||||||||||| || || ||| |||| |||||||||||| |||| || Sbjct: 196 gctactattgtggatcagccagtttgtatagctcgctggggacagcctaatgaaccatac 255 Query: 308 aatttctgggacaggccaacttggcaggtcgaggaggaaattgaatatagggactaccaa 367 ||||||||||||| |||| |||| | ||||||||||||||||| ||| ||| ||| Sbjct: 256 aatttctgggacacaccaaattggtatacagaggaggaaattgaatacaggacctatcaa 315 Query: 368 tcatgccagttcaacgccactccacaggaggctttgacagtggctcaggacgtcgtgaag 427 ||||||||||||| |||||||||| || |||||||| | |||||||| || |||||| Sbjct: 316 acatgccagttcaattccactccacaagaagctttgacgattgctcaggatgttgtgaag 375 Query: 428 acgatgctgtcgaggggatacatactgagcaaggacgcattgtccagggctagagctttc 487 || ||||| | ||||||||| |||| |||||||| ||| || ||||||||||||| || Sbjct: 376 acaatgctagcaaggggatacgtactcagcaaggatgcactggccagggctagagccttt 435 Query: 488 gacgagtcccaccagttatctggatctgcggcagcaaaggctgcagagctgagcaggagg 547 || |||||||| ||| || | | |||| ||||| |||||||| |||||||||| |||| Sbjct: 436 gatgagtcccatcaggtaacagcgactgccgcagccaaggctgcggagctgagcaagagg 495 Query: 548 ctcggcctgactgacagagtcag 570 | ||||| || ||||| ||||| Sbjct: 496 attggcctaaccgacagggtcag 518 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 550 cggcctgactgacagagtcagtgctggtgttggcgcaatcagatcagtggacgagacata 609 |||||| || ||||| ||||| || |||||||| ||||||||||| ||||| |||||||| Sbjct: 519 cggcctaaccgacagggtcagcgccggtgttggtgcaatcagatcggtggatgagacata 578 Query: 610 ccatgttaccgagacg 625 ||| || |||||||| Sbjct: 579 ccacgtatccgagacg 594
>gb|AY108401.1| Zea mays PCO068228 mRNA sequence Length = 1376 Score = 327 bits (165), Expect = 3e-86 Identities = 333/389 (85%) Strand = Plus / Plus Query: 47 ggaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtct 106 ||||| ||||| | ||||||| ||||||| ||||||||||||| || ||||| | ||| Sbjct: 342 ggaattatgagtgaaacagggcacactgtacaagtcactaacctctcgagcagagtatct 401 Query: 107 gaaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatc 166 |||| |||||||||||||||||| || |||||||| ||||||||||||||||| |||||| Sbjct: 402 gaaagtgatcttcatgagttcttttcgttctctggtcctattgagcatatagaacttatc 461 Query: 167 agatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttggaa 226 ||||||| |||||| ||| | |||||||||||||| |||||||||| || |||||||||| Sbjct: 462 agatcagaaggatacggtgccactgcttatgtgacattcaaggaacgctttgccttggaa 521 Query: 227 actgcagtattgttgagtggggctaccattgtggatcagccggtgtgcatatctcgttgg 286 |||||||||||| | ||||||||||| |||||||||||||| || |||||| | |||| Sbjct: 522 actgcagtattgctcagtggggctactattgtggatcagccagtatgcataacctattgg 581 Query: 287 ggacagcctgatgagcctagtaatttctgggacaggccaacttggcaggtcgaggaggaa 346 ||||| ||||| | || ||||||||||||||||||||||||| |||| || |||||| Sbjct: 582 ggacaacctgagggaacttttaatttctgggacaggccaacttgggaggttgaagaggaa 641 Query: 347 attgaatatagggactaccaatcatgccagttcaacgccactccacaggaggctttgaca 406 || ||||| ||| |||||||| ||||||||| |||| | ||||| ||||| ||||| ||| Sbjct: 642 atcgaatacaggaactaccaaacatgccagtacaacactactccgcaggaagcttttaca 701 Query: 407 gtggctcaggacgtcgtgaagacgatgct 435 |||||||| || || ||||||||||||| Sbjct: 702 gtggctcaagatatcatgaagacgatgct 730 Score = 48.1 bits (24), Expect = 0.035 Identities = 69/84 (82%) Strand = Plus / Plus Query: 526 ggctgcagagctgagcaggaggctcggcctgactgacagagtcagtgctggtgttggcgc 585 ||||||||||||||||| ||| | || | ||||| || |||| |||||||||||| || Sbjct: 821 ggctgcagagctgagcaagagaattggtttaactgatagggtcaatgctggtgttggtgc 880 Query: 586 aatcagatcagtggacgagacata 609 ||| ||||||| || |||||||| Sbjct: 881 aatgcgatcagtcgatgagacata 904
>dbj|AK062620.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-B07, full insert sequence Length = 479 Score = 321 bits (162), Expect = 2e-84 Identities = 309/358 (86%) Strand = Plus / Plus Query: 48 gaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtctg 107 |||||||||| || || || ||||| || ||||| ||||||||||||||||| || |||| Sbjct: 108 gaatcatgagtggtacgggatacacagttgaagttactaacctgtcaagcagggcatctg 167 Query: 108 aaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatca 167 ||| |||||||||||||||||| |||||||||||| | |||||||||||||| ||||||| Sbjct: 168 aaagtgatcttcatgagttcttttcattctctggagcgattgagcatatagaacttatca 227 Query: 168 gatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttggaaa 227 ||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||||||||| Sbjct: 228 gatcaggagaatatggttctactgcttatgtgacattcaaggaaccctattccttggaaa 287 Query: 228 ctgcagtattgttgagtggggctaccattgtggatcagccggtgtgcatatctcgttggg 287 ||||||||||| | ||||||||||| |||||||||||||| || || ||| |||| |||| Sbjct: 288 ctgcagtattgctcagtggggctactattgtggatcagccagtttgtatagctcgctggg 347 Query: 288 gacagcctgatgagcctagtaatttctgggacaggccaacttggcaggtcgaggaggaaa 347 |||||||| |||| || ||||||||||||| |||| |||| | |||||||||| Sbjct: 348 gacagcctaatgaaccatacaatttctgggacacaccaaattggtatacagaggaggaaa 407 Query: 348 ttgaatatagggactaccaatcatgccagttcaacgccactccacaggaggctttgac 405 ||||||| ||| ||| ||| ||||||||||||| |||||||||| || |||||||| Sbjct: 408 ttgaatacaggacctatcaaacatgccagttcaattccactccacaagaagctttgac 465
>gb|BT016343.1| Zea mays clone Contig176 mRNA sequence Length = 1045 Score = 319 bits (161), Expect = 6e-84 Identities = 332/389 (85%) Strand = Plus / Minus Query: 47 ggaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtct 106 ||||| ||||| | ||||||| ||||||| ||||||||||||| || ||||| | ||| Sbjct: 942 ggaattatgagtgaaacagggcacactgtacaagtcactaacctctcgagcagagtatct 883 Query: 107 gaaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatc 166 |||| |||||||||||||||||| || |||||||| |||||| |||||||||| |||||| Sbjct: 882 gaaagtgatcttcatgagttcttttcgttctctggtcctattcagcatatagaacttatc 823 Query: 167 agatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttggaa 226 ||||||| |||||| ||| | |||||||||||||| |||||||||| || |||||||||| Sbjct: 822 agatcagaaggatacggtgccactgcttatgtgacattcaaggaacgctttgccttggaa 763 Query: 227 actgcagtattgttgagtggggctaccattgtggatcagccggtgtgcatatctcgttgg 286 |||||||||||| | ||||||||||| |||||||||||||| || |||||| | |||| Sbjct: 762 actgcagtattgctcagtggggctactattgtggatcagccagtatgcataacctattgg 703 Query: 287 ggacagcctgatgagcctagtaatttctgggacaggccaacttggcaggtcgaggaggaa 346 ||||| ||||| | || ||||||||||||||||||||||||| |||| || |||||| Sbjct: 702 ggacaacctgagggaacttttaatttctgggacaggccaacttgggaggttgaagaggaa 643 Query: 347 attgaatatagggactaccaatcatgccagttcaacgccactccacaggaggctttgaca 406 || ||||| ||| |||||||| ||||||||| |||| | ||||| ||||| ||||| ||| Sbjct: 642 atcgaatacaggaactaccaaacatgccagtacaacactactccgcaggaagcttttaca 583 Query: 407 gtggctcaggacgtcgtgaagacgatgct 435 |||||||| || || ||||||||||||| Sbjct: 582 gtggctcaagatatcatgaagacgatgct 554 Score = 48.1 bits (24), Expect = 0.035 Identities = 69/84 (82%) Strand = Plus / Minus Query: 526 ggctgcagagctgagcaggaggctcggcctgactgacagagtcagtgctggtgttggcgc 585 ||||||||||||||||| ||| | || | ||||| || |||| |||||||||||| || Sbjct: 463 ggctgcagagctgagcaagagaattggtttaactgatagggtcaatgctggtgttggtgc 404 Query: 586 aatcagatcagtggacgagacata 609 ||| ||||||| || |||||||| Sbjct: 403 aatgcgatcagtcgatgagacata 380
>gb|AY105883.1| Zea mays PCO068227 mRNA sequence Length = 1236 Score = 305 bits (154), Expect = 9e-80 Identities = 457/558 (81%) Strand = Plus / Plus Query: 52 catgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtctgaaaa 111 |||||| | ||||||| ||||||| ||||||||||||| || ||||| | ||||||| Sbjct: 271 catgagtgaaacagggcacactgtacaagtcactaacctctcgagcagagtatctgaaag 330 Query: 112 tgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatcagatc 171 ||||||| |||||||||| || |||||||| |||||||| ||| | || ||||||||||| Sbjct: 331 tgatctttatgagttcttttcgttctctggccctattgaacatgttgaacttatcagatc 390 Query: 172 aggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttggaaactgc 231 ||||| ||| ||| | |||||||||||||| |||||||| | || ||||||||||||||| Sbjct: 391 aggagaatacggtgctactgcttatgtgacattcaaggagcgctttgccttggaaactgc 450 Query: 232 agtattgttgagtggggctaccattgtggatcagccggtgtgcatatctcgttggggaca 291 |||||| | ||||||||||| ||||||||||||||||| |||||| || ||||||||| Sbjct: 451 ggtattgctcagtggggctactattgtggatcagccggtatgcataacttattggggaca 510 Query: 292 gcctgatgagcctagtaatttctgggacaggccaacttggcaggtcgaggaggaaattga 351 ||||| ||| || ||||||||||||||||||||||||| |||| || ||||||||||| Sbjct: 511 acctgaggagacttttaatttctgggacaggccaacttgggaggttgaagaggaaattga 570 Query: 352 atatagggactaccaatcatgccagttcaacgccactccacaggaggctttgacagtggc 411 ||| | | || ||||||||||||| |||| | ||||| ||||| ||| | |||||||| Sbjct: 571 atacacgagttatcaatcatgccagtacaacactactccgcaggaagctcttacagtggc 630 Query: 412 tcaggacgtcgtgaagacgatgctgtcgaggggatacatactgagcaaggacgcattgtc 471 ||| || |||||||||||||||| | | ||| ||| | || ||||||||||| ||| | Sbjct: 631 tcaagatatcgtgaagacgatgctagcaaaggggtacgtgctcagcaaggacgctttggc 690 Query: 472 cagggctagagctttcgacgagtcccaccagttatctggatctgcggcagcaaaggctgc 531 | ||||||||| || || ||||||| | ||| | | | || ||||| |||||||| Sbjct: 691 taaggctagagcctttgatgagtcccgcggattaacagctgcagctgcagccaaggctgc 750 Query: 532 agagctgagcaggaggctcggcctgactgacagagtcagtgctggtgttggcgcaatcag 591 ||||||||||| ||| | || | |||||||| |||||||||||||| || ||||| | Sbjct: 751 agagctgagcaagagaattggtttaactgacagggtcagtgctggtgtcggtgcaatgcg 810 Query: 592 atcagtggacgagacata 609 ||| || || |||||||| Sbjct: 811 atcggtcgatgagacata 828
>dbj|AK059892.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-D10, full insert sequence Length = 927 Score = 161 bits (81), Expect = 3e-36 Identities = 267/329 (81%) Strand = Plus / Plus Query: 242 agtggggctaccattgtggatcagccggtgtgcatatctcgttggggacagcctgatgag 301 ||||||||||| |||||||||||||| || || ||| |||| |||||||||||| |||| Sbjct: 1 agtggggctactattgtggatcagccagtttgtatagctcgctggggacagcctaatgaa 60 Query: 302 cctagtaatttctgggacaggccaacttggcaggtcgaggaggaaattgaatatagggac 361 || ||||||||||||| |||| |||| | ||||||||||||||||| ||| | Sbjct: 61 ccatacaatttctgggacacaccaaattggtatacagaggaggaaattgaatacaggacc 120 Query: 362 taccaatcatgccagttcaacgccactccacaggaggctttgacagtggctcaggacgtc 421 || ||| ||||||||||||| |||||||||| || |||||||| | |||||||| || Sbjct: 121 tatcaaacatgccagttcaattccactccacaagaagctttgacgattgctcaggatgtt 180 Query: 422 gtgaagacgatgctgtcgaggggatacatactgagcaaggacgcattgtccagggctaga 481 |||||||| ||||| | ||||||||| |||| |||||||| ||| || ||||||||||| Sbjct: 181 gtgaagacaatgctagcaaggggatacgtactcagcaaggatgcactggccagggctaga 240 Query: 482 gctttcgacgagtcccaccagttatctggatctgcggcagcaaaggctgcagagctgagc 541 || || || |||||||| ||| || | | |||| ||||| |||||||| ||||||||| Sbjct: 241 gcctttgatgagtcccatcaggtaacagcgactgccgcagccaaggctgcggagctgagc 300 Query: 542 aggaggctcggcctgactgacagagtcag 570 | |||| | ||||| || ||||| ||||| Sbjct: 301 aagaggattggcctaaccgacagggtcag 329 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 550 cggcctgactgacagagtcagtgctggtgttggcgcaatcagatcagtggacgagacata 609 |||||| || ||||| ||||| || |||||||| ||||||||||| ||||| |||||||| Sbjct: 330 cggcctaaccgacagggtcagcgccggtgttggtgcaatcagatcggtggatgagacata 389 Query: 610 ccatgttaccgagacg 625 ||| || |||||||| Sbjct: 390 ccacgtatccgagacg 405
>emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063C18, complete sequence Length = 150416 Score = 129 bits (65), Expect = 1e-26 Identities = 107/121 (88%) Strand = Plus / Minus Query: 48 gaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtctg 107 |||||||||| || || || ||||| || ||||| ||||||||||||||||| || |||| Sbjct: 29779 gaatcatgagtggtacgggatacacagttgaagttactaacctgtcaagcagggcatctg 29720 Query: 108 aaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatca 167 ||| |||||||||||||||||| |||||||||||| | |||||||||||||| ||||||| Sbjct: 29719 aaagtgatcttcatgagttcttttcattctctggagcgattgagcatatagaacttatca 29660 Query: 168 g 168 | Sbjct: 29659 g 29659 Score = 113 bits (57), Expect = 7e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 166 cagatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttgga 225 ||||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||||||| Sbjct: 29322 cagatcaggagaatatggttctactgcttatgtgacattcaaggaaccctattccttgga 29263 Query: 226 aactgcagtattg 238 ||||||||||||| Sbjct: 29262 aactgcagtattg 29250 Score = 107 bits (54), Expect = 4e-20 Identities = 165/202 (81%) Strand = Plus / Minus Query: 369 catgccagttcaacgccactccacaggaggctttgacagtggctcaggacgtcgtgaaga 428 ||||||||||||| |||||||||| || |||||||| | |||||||| || ||||||| Sbjct: 28164 catgccagttcaattccactccacaagaagctttgacgattgctcaggatgttgtgaaga 28105 Query: 429 cgatgctgtcgaggggatacatactgagcaaggacgcattgtccagggctagagctttcg 488 | ||||| | ||||||||| |||| |||||||| ||| || ||||||||||||| || | Sbjct: 28104 caatgctagcaaggggatacgtactcagcaaggatgcactggccagggctagagcctttg 28045 Query: 489 acgagtcccaccagttatctggatctgcggcagcaaaggctgcagagctgagcaggaggc 548 | |||||||| ||| || | | |||| ||||| |||||||| |||||||||| |||| Sbjct: 28044 atgagtcccatcaggtaacagcgactgccgcagccaaggctgcggagctgagcaagagga 27985 Query: 549 tcggcctgactgacagagtcag 570 | ||||| || ||||| ||||| Sbjct: 27984 ttggcctaaccgacagggtcag 27963 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 550 cggcctgactgacagagtcagtgctggtgttggcgcaatcagatcagtggacgagacata 609 |||||| || ||||| ||||| || |||||||| ||||||||||| ||||| |||||||| Sbjct: 27962 cggcctaaccgacagggtcagcgccggtgttggtgcaatcagatcggtggatgagacata 27903 Query: 610 ccatgttaccgagacg 625 ||| || |||||||| Sbjct: 27902 ccacgtatccgagacg 27887 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 245 ggggctaccattgtggatcagccggtgtgcatatctcgttggggacagcctgatgagcct 304 |||||||| |||||||||||||| || || ||| |||| |||||||||||| |||| || Sbjct: 28438 ggggctactattgtggatcagccagtttgtatagctcgctggggacagcctaatgaacca 28379 Query: 305 agtaatttctgggacaggccaacttggcaggtcgaggaggaaattgaatataggg 359 ||||||||||||| |||| |||| | ||||||||||||||||| |||| Sbjct: 28378 tacaatttctgggacacaccaaattggtatacagaggaggaaattgaatacaggg 28324
>emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0079B02, complete sequence Length = 126659 Score = 129 bits (65), Expect = 1e-26 Identities = 107/121 (88%) Strand = Plus / Minus Query: 48 gaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtctg 107 |||||||||| || || || ||||| || ||||| ||||||||||||||||| || |||| Sbjct: 65365 gaatcatgagtggtacgggatacacagttgaagttactaacctgtcaagcagggcatctg 65306 Query: 108 aaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatca 167 ||| |||||||||||||||||| |||||||||||| | |||||||||||||| ||||||| Sbjct: 65305 aaagtgatcttcatgagttcttttcattctctggagcgattgagcatatagaacttatca 65246 Query: 168 g 168 | Sbjct: 65245 g 65245 Score = 113 bits (57), Expect = 7e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 166 cagatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttgga 225 ||||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||||||| Sbjct: 64908 cagatcaggagaatatggttctactgcttatgtgacattcaaggaaccctattccttgga 64849 Query: 226 aactgcagtattg 238 ||||||||||||| Sbjct: 64848 aactgcagtattg 64836 Score = 107 bits (54), Expect = 4e-20 Identities = 165/202 (81%) Strand = Plus / Minus Query: 369 catgccagttcaacgccactccacaggaggctttgacagtggctcaggacgtcgtgaaga 428 ||||||||||||| |||||||||| || |||||||| | |||||||| || ||||||| Sbjct: 63750 catgccagttcaattccactccacaagaagctttgacgattgctcaggatgttgtgaaga 63691 Query: 429 cgatgctgtcgaggggatacatactgagcaaggacgcattgtccagggctagagctttcg 488 | ||||| | ||||||||| |||| |||||||| ||| || ||||||||||||| || | Sbjct: 63690 caatgctagcaaggggatacgtactcagcaaggatgcactggccagggctagagcctttg 63631 Query: 489 acgagtcccaccagttatctggatctgcggcagcaaaggctgcagagctgagcaggaggc 548 | |||||||| ||| || | | |||| ||||| |||||||| |||||||||| |||| Sbjct: 63630 atgagtcccatcaggtaacagcgactgccgcagccaaggctgcggagctgagcaagagga 63571 Query: 549 tcggcctgactgacagagtcag 570 | ||||| || ||||| ||||| Sbjct: 63570 ttggcctaaccgacagggtcag 63549 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 550 cggcctgactgacagagtcagtgctggtgttggcgcaatcagatcagtggacgagacata 609 |||||| || ||||| ||||| || |||||||| ||||||||||| ||||| |||||||| Sbjct: 63548 cggcctaaccgacagggtcagcgccggtgttggtgcaatcagatcggtggatgagacata 63489 Query: 610 ccatgttaccgagacg 625 ||| || |||||||| Sbjct: 63488 ccacgtatccgagacg 63473 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 245 ggggctaccattgtggatcagccggtgtgcatatctcgttggggacagcctgatgagcct 304 |||||||| |||||||||||||| || || ||| |||| |||||||||||| |||| || Sbjct: 64024 ggggctactattgtggatcagccagtttgtatagctcgctggggacagcctaatgaacca 63965 Query: 305 agtaatttctgggacaggccaacttggcaggtcgaggaggaaattgaatataggg 359 ||||||||||||| |||| |||| | ||||||||||||||||| |||| Sbjct: 63964 tacaatttctgggacacaccaaattggtatacagaggaggaaattgaatacaggg 63910
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 129 bits (65), Expect = 1e-26 Identities = 107/121 (88%) Strand = Plus / Minus Query: 48 gaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtctg 107 |||||||||| || || || ||||| || ||||| ||||||||||||||||| || |||| Sbjct: 32670344 gaatcatgagtggtacgggatacacagttgaagttactaacctgtcaagcagggcatctg 32670285 Query: 108 aaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatca 167 ||| |||||||||||||||||| |||||||||||| | |||||||||||||| ||||||| Sbjct: 32670284 aaagtgatcttcatgagttcttttcattctctggagcgattgagcatatagaacttatca 32670225 Query: 168 g 168 | Sbjct: 32670224 g 32670224 Score = 113 bits (57), Expect = 7e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 166 cagatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttgga 225 ||||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||||||| Sbjct: 32669887 cagatcaggagaatatggttctactgcttatgtgacattcaaggaaccctattccttgga 32669828 Query: 226 aactgcagtattg 238 ||||||||||||| Sbjct: 32669827 aactgcagtattg 32669815 Score = 107 bits (54), Expect = 4e-20 Identities = 165/202 (81%) Strand = Plus / Minus Query: 369 catgccagttcaacgccactccacaggaggctttgacagtggctcaggacgtcgtgaaga 428 ||||||||||||| |||||||||| || |||||||| | |||||||| || ||||||| Sbjct: 32668729 catgccagttcaattccactccacaagaagctttgacgattgctcaggatgttgtgaaga 32668670 Query: 429 cgatgctgtcgaggggatacatactgagcaaggacgcattgtccagggctagagctttcg 488 | ||||| | ||||||||| |||| |||||||| ||| || ||||||||||||| || | Sbjct: 32668669 caatgctagcaaggggatacgtactcagcaaggatgcactggccagggctagagcctttg 32668610 Query: 489 acgagtcccaccagttatctggatctgcggcagcaaaggctgcagagctgagcaggaggc 548 | |||||||| ||| || | | |||| ||||| |||||||| |||||||||| |||| Sbjct: 32668609 atgagtcccatcaggtaacagcgactgccgcagccaaggctgcggagctgagcaagagga 32668550 Query: 549 tcggcctgactgacagagtcag 570 | ||||| || ||||| ||||| Sbjct: 32668549 ttggcctaaccgacagggtcag 32668528 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 550 cggcctgactgacagagtcagtgctggtgttggcgcaatcagatcagtggacgagacata 609 |||||| || ||||| ||||| || |||||||| ||||||||||| ||||| |||||||| Sbjct: 32668527 cggcctaaccgacagggtcagcgccggtgttggtgcaatcagatcggtggatgagacata 32668468 Query: 610 ccatgttaccgagacg 625 ||| || |||||||| Sbjct: 32668467 ccacgtatccgagacg 32668452 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 245 ggggctaccattgtggatcagccggtgtgcatatctcgttggggacagcctgatgagcct 304 |||||||| |||||||||||||| || || ||| |||| |||||||||||| |||| || Sbjct: 32669003 ggggctactattgtggatcagccagtttgtatagctcgctggggacagcctaatgaacca 32668944 Query: 305 agtaatttctgggacaggccaacttggcaggtcgaggaggaaattgaatataggg 359 ||||||||||||| |||| |||| | ||||||||||||||||| |||| Sbjct: 32668943 tacaatttctgggacacaccaaattggtatacagaggaggaaattgaatacaggg 32668889
>emb|AL732339.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0414F07, complete sequence Length = 50928 Score = 129 bits (65), Expect = 1e-26 Identities = 107/121 (88%) Strand = Plus / Minus Query: 48 gaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtctg 107 |||||||||| || || || ||||| || ||||| ||||||||||||||||| || |||| Sbjct: 47626 gaatcatgagtggtacgggatacacagttgaagttactaacctgtcaagcagggcatctg 47567 Query: 108 aaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatca 167 ||| |||||||||||||||||| |||||||||||| | |||||||||||||| ||||||| Sbjct: 47566 aaagtgatcttcatgagttcttttcattctctggagcgattgagcatatagaacttatca 47507 Query: 168 g 168 | Sbjct: 47506 g 47506 Score = 113 bits (57), Expect = 7e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 166 cagatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttgga 225 ||||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||||||| Sbjct: 47169 cagatcaggagaatatggttctactgcttatgtgacattcaaggaaccctattccttgga 47110 Query: 226 aactgcagtattg 238 ||||||||||||| Sbjct: 47109 aactgcagtattg 47097 Score = 107 bits (54), Expect = 4e-20 Identities = 165/202 (81%) Strand = Plus / Minus Query: 369 catgccagttcaacgccactccacaggaggctttgacagtggctcaggacgtcgtgaaga 428 ||||||||||||| |||||||||| || |||||||| | |||||||| || ||||||| Sbjct: 46011 catgccagttcaattccactccacaagaagctttgacgattgctcaggatgttgtgaaga 45952 Query: 429 cgatgctgtcgaggggatacatactgagcaaggacgcattgtccagggctagagctttcg 488 | ||||| | ||||||||| |||| |||||||| ||| || ||||||||||||| || | Sbjct: 45951 caatgctagcaaggggatacgtactcagcaaggatgcactggccagggctagagcctttg 45892 Query: 489 acgagtcccaccagttatctggatctgcggcagcaaaggctgcagagctgagcaggaggc 548 | |||||||| ||| || | | |||| ||||| |||||||| |||||||||| |||| Sbjct: 45891 atgagtcccatcaggtaacagcgactgccgcagccaaggctgcggagctgagcaagagga 45832 Query: 549 tcggcctgactgacagagtcag 570 | ||||| || ||||| ||||| Sbjct: 45831 ttggcctaaccgacagggtcag 45810 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 550 cggcctgactgacagagtcagtgctggtgttggcgcaatcagatcagtggacgagacata 609 |||||| || ||||| ||||| || |||||||| ||||||||||| ||||| |||||||| Sbjct: 45809 cggcctaaccgacagggtcagcgccggtgttggtgcaatcagatcggtggatgagacata 45750 Query: 610 ccatgttaccgagacg 625 ||| || |||||||| Sbjct: 45749 ccacgtatccgagacg 45734 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 245 ggggctaccattgtggatcagccggtgtgcatatctcgttggggacagcctgatgagcct 304 |||||||| |||||||||||||| || || ||| |||| |||||||||||| |||| || Sbjct: 46285 ggggctactattgtggatcagccagtttgtatagctcgctggggacagcctaatgaacca 46226 Query: 305 agtaatttctgggacaggccaacttggcaggtcgaggaggaaattgaatataggg 359 ||||||||||||| |||| |||| | ||||||||||||||||| |||| Sbjct: 46225 tacaatttctgggacacaccaaattggtatacagaggaggaaattgaatacaggg 46171
>emb|AL442112.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0423H10, complete sequence Length = 76529 Score = 129 bits (65), Expect = 1e-26 Identities = 107/121 (88%) Strand = Plus / Minus Query: 48 gaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtctg 107 |||||||||| || || || ||||| || ||||| ||||||||||||||||| || |||| Sbjct: 11108 gaatcatgagtggtacgggatacacagttgaagttactaacctgtcaagcagggcatctg 11049 Query: 108 aaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatca 167 ||| |||||||||||||||||| |||||||||||| | |||||||||||||| ||||||| Sbjct: 11048 aaagtgatcttcatgagttcttttcattctctggagcgattgagcatatagaacttatca 10989 Query: 168 g 168 | Sbjct: 10988 g 10988 Score = 113 bits (57), Expect = 7e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 166 cagatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttgga 225 ||||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||||||| Sbjct: 10651 cagatcaggagaatatggttctactgcttatgtgacattcaaggaaccctattccttgga 10592 Query: 226 aactgcagtattg 238 ||||||||||||| Sbjct: 10591 aactgcagtattg 10579 Score = 107 bits (54), Expect = 4e-20 Identities = 165/202 (81%) Strand = Plus / Minus Query: 369 catgccagttcaacgccactccacaggaggctttgacagtggctcaggacgtcgtgaaga 428 ||||||||||||| |||||||||| || |||||||| | |||||||| || ||||||| Sbjct: 9493 catgccagttcaattccactccacaagaagctttgacgattgctcaggatgttgtgaaga 9434 Query: 429 cgatgctgtcgaggggatacatactgagcaaggacgcattgtccagggctagagctttcg 488 | ||||| | ||||||||| |||| |||||||| ||| || ||||||||||||| || | Sbjct: 9433 caatgctagcaaggggatacgtactcagcaaggatgcactggccagggctagagcctttg 9374 Query: 489 acgagtcccaccagttatctggatctgcggcagcaaaggctgcagagctgagcaggaggc 548 | |||||||| ||| || | | |||| ||||| |||||||| |||||||||| |||| Sbjct: 9373 atgagtcccatcaggtaacagcgactgccgcagccaaggctgcggagctgagcaagagga 9314 Query: 549 tcggcctgactgacagagtcag 570 | ||||| || ||||| ||||| Sbjct: 9313 ttggcctaaccgacagggtcag 9292 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 550 cggcctgactgacagagtcagtgctggtgttggcgcaatcagatcagtggacgagacata 609 |||||| || ||||| ||||| || |||||||| ||||||||||| ||||| |||||||| Sbjct: 9291 cggcctaaccgacagggtcagcgccggtgttggtgcaatcagatcggtggatgagacata 9232 Query: 610 ccatgttaccgagacg 625 ||| || |||||||| Sbjct: 9231 ccacgtatccgagacg 9216 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 245 ggggctaccattgtggatcagccggtgtgcatatctcgttggggacagcctgatgagcct 304 |||||||| |||||||||||||| || || ||| |||| |||||||||||| |||| || Sbjct: 9767 ggggctactattgtggatcagccagtttgtatagctcgctggggacagcctaatgaacca 9708 Query: 305 agtaatttctgggacaggccaacttggcaggtcgaggaggaaattgaatataggg 359 ||||||||||||| |||| |||| | ||||||||||||||||| |||| Sbjct: 9707 tacaatttctgggacacaccaaattggtatacagaggaggaaattgaatacaggg 9653
>emb|AJ293489.1|SHY293489 Saccharum hybrid cultivar R570 microsatellite DNA, clone mSSCIR17 Length = 403 Score = 93.7 bits (47), Expect = 7e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 78 aagtcactaacctgtcaagcagcgcgtctgaaaatgatcttcatgagttcttctcattct 137 ||||||||||||| || ||||| | ||||||| |||||||||||||||||| || |||| Sbjct: 400 aagtcactaacctctcgagcagagtatctgaaagtgatcttcatgagttcttttcgttct 341 Query: 138 ctggacctattgagcatatagaccttatcag 168 |||| ||||||||||| ||||| |||||||| Sbjct: 340 ctggtcctattgagcacatagaacttatcag 310
>emb|BX572093.1| Prochlorococcus marinus MED4 complete genome; segment 4/5 Length = 348986 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 154 tatagaccttatcagatcagga 175 |||||||||||||||||||||| Sbjct: 104615 tatagaccttatcagatcagga 104636
>gb|AY466214.1| Litopenaeus vannamei microsatellite TUMXLV7.107 sequence Length = 416 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 agggagggagggcgagaccgc 38 ||||||||||||||||||||| Sbjct: 59 agggagggagggcgagaccgc 39
>gb|AC079193.10| Homo sapiens chromosome 8, clone RP11-468H14, complete sequence Length = 169041 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 ttcatgagttcttctcattctctgg 141 |||||||||||||||| |||||||| Sbjct: 149865 ttcatgagttcttctccttctctgg 149841
>gb|AC091050.3| Homo sapiens chromosome 8, clone RP11-242F4, complete sequence Length = 139980 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 ttcatgagttcttctcattctctgg 141 |||||||||||||||| |||||||| Sbjct: 86172 ttcatgagttcttctccttctctgg 86196
>dbj|AP006207.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-702B3, complete sequence Length = 170015 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 ttcatgagttcttctcattctctgg 141 |||||||||||||||| |||||||| Sbjct: 119187 ttcatgagttcttctccttctctgg 119163
>dbj|AB020859.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular colorectal and non-small cell lung cancer , segment 2/11 Length = 100000 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 ttcatgagttcttctcattctctgg 141 |||||||||||||||| |||||||| Sbjct: 80092 ttcatgagttcttctccttctctgg 80068
>ref|XM_466676.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1750 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 424 gaagacgatgctgtcgaggggata 447 ||||||||||||||||||| |||| Sbjct: 1447 gaagacgatgctgtcgaggagata 1470
>ref|XM_506863.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1476_F05.33 mRNA Length = 1982 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 424 gaagacgatgctgtcgaggggata 447 ||||||||||||||||||| |||| Sbjct: 1679 gaagacgatgctgtcgaggagata 1702
>emb|BX957236.8| Zebrafish DNA sequence from clone DKEY-178O3 in linkage group 6, complete sequence Length = 211391 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 agttcttctcattctctgga 142 |||||||||||||||||||| Sbjct: 16628 agttcttctcattctctgga 16647
>emb|Z83838.2|HS127B20 Human DNA sequence from clone RP1-127B20 on chromosome 22, complete sequence Length = 135259 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 556 gactgacagagtcagtgctg 575 |||||||||||||||||||| Sbjct: 23114 gactgacagagtcagtgctg 23095
>emb|AL358473.10| Human DNA sequence from clone RP11-168O16 on chromosome 1 Contains the 5' end of the KIF21B gene for kinesin family member 21B, two novel genes and the 3' end of the CACNA1S gene for calcium channel voltage-dependent L type alpha 1S subunit, complete sequence Length = 78034 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 aggctgcagagctgagcagg 544 |||||||||||||||||||| Sbjct: 53270 aggctgcagagctgagcagg 53289
>emb|AJ251899.1|OSA251899 Oryza sativa mRNA for S-adenosylmethionine decarboxylase 2 (adometDC2 gene) Length = 1971 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 424 gaagacgatgctgtcgaggggata 447 ||||||||||||||||||| |||| Sbjct: 1665 gaagacgatgctgtcgaggagata 1688
>gb|AC149225.18| Danio rerio clone ch211-103f17, complete sequence Length = 185038 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 agttcttctcattctctgga 142 |||||||||||||||||||| Sbjct: 152518 agttcttctcattctctgga 152499
>ref|XM_680154.1| PREDICTED: Danio rerio similar to Mdm4, transformed 3T3 cell double minute 1, p53 binding protein (LOC557148), mRNA Length = 2379 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 tgtccagggctagagctttc 487 |||||||||||||||||||| Sbjct: 1346 tgtccagggctagagctttc 1327
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 424 gaagacgatgctgtcgaggggata 447 ||||||||||||||||||| |||| Sbjct: 24067366 gaagacgatgctgtcgaggagata 24067389
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gggagggcgagaccgcgaga 42 |||||||||||||||||||| Sbjct: 5971540 gggagggcgagaccgcgaga 5971559
>gb|AC123767.2| Homo sapiens chromosome 8, clone RP11-122L4, complete sequence Length = 154078 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 gaaaatgatcttcatgagtt 126 |||||||||||||||||||| Sbjct: 64152 gaaaatgatcttcatgagtt 64133
>gb|AC019172.4| Homo sapiens BAC clone RP11-178E6 from 2, complete sequence Length = 176983 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 cttcatgagttcttctcatt 135 |||||||||||||||||||| Sbjct: 99493 cttcatgagttcttctcatt 99474
>dbj|AP002093.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0466B10 Length = 151806 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gggagggcgagaccgcgaga 42 |||||||||||||||||||| Sbjct: 39428 gggagggcgagaccgcgaga 39447
>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A05 Length = 174290 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 424 gaagacgatgctgtcgaggggata 447 ||||||||||||||||||| |||| Sbjct: 26107 gaagacgatgctgtcgaggagata 26130
>dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1476_F05 Length = 125426 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 424 gaagacgatgctgtcgaggggata 447 ||||||||||||||||||| |||| Sbjct: 102404 gaagacgatgctgtcgaggagata 102427
>dbj|AK070259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041P13, full insert sequence Length = 1982 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 424 gaagacgatgctgtcgaggggata 447 ||||||||||||||||||| |||| Sbjct: 1679 gaagacgatgctgtcgaggagata 1702
>dbj|AK062133.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-E08, full insert sequence Length = 1750 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 424 gaagacgatgctgtcgaggggata 447 ||||||||||||||||||| |||| Sbjct: 1447 gaagacgatgctgtcgaggagata 1470
>emb|BX465210.7| Zebrafish DNA sequence from clone CH211-266A5 in linkage group 4, complete sequence Length = 171708 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 tgtccagggctagagctttc 487 |||||||||||||||||||| Sbjct: 60357 tgtccagggctagagctttc 60338
>dbj|AK059503.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A07, full insert sequence Length = 1232 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 424 gaagacgatgctgtcgaggggata 447 ||||||||||||||||||| |||| Sbjct: 911 gaagacgatgctgtcgaggagata 934
>dbj|AP001006.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-687I9, complete sequence Length = 193999 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 gtggggctaccattgtggat 262 |||||||||||||||||||| Sbjct: 169165 gtggggctaccattgtggat 169146
>dbj|AP005272.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-172F10, complete sequence Length = 164943 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 gtggggctaccattgtggat 262 |||||||||||||||||||| Sbjct: 34453 gtggggctaccattgtggat 34434
>dbj|AP001999.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-469N6, complete sequence Length = 172504 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 gaaaatgatcttcatgagtt 126 |||||||||||||||||||| Sbjct: 139842 gaaaatgatcttcatgagtt 139861 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,943,214 Number of Sequences: 3902068 Number of extensions: 4943214 Number of successful extensions: 90683 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 41 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90531 Number of HSP's gapped (non-prelim): 136 length of query: 625 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 602 effective length of database: 17,143,297,704 effective search space: 10320265217808 effective search space used: 10320265217808 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
