ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags36n16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 484 e-133
2dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic D... 484 e-133
3dbj|AK059085.1| Oryza sativa (japonica cultivar-group) cDNA clon... 212 1e-51
4ref|NM_124494.1| Arabidopsis thaliana unknown protein AT5G51150 ... 98 4e-17
5gb|AY091374.1| Arabidopsis thaliana unknown protein (At5g51150) ... 98 4e-17
6gb|AY045838.1| Arabidopsis thaliana unknown protein (At5g51150) ... 98 4e-17
7dbj|AB023044.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 60 9e-06
8gb|AC104658.6| Homo sapiens BAC clone RP11-593M6 from 4, complet... 48 0.034
9gb|AC121869.2| Mus musculus BAC clone RP24-121C10 from 17, compl... 44 0.54
10ref|XM_758430.1| Theileria parva strain Muguga chromosome 3 hypo... 44 0.54
11ref|XM_758431.1| Theileria parva strain Muguga chromosome 3 hypo... 44 0.54
12gb|AC114933.2| Homo sapiens chromosome 5 clone CTD-2023M8, compl... 44 0.54
13gb|AC151601.5| Mus musculus BAC clone RP23-241H10 from chromosom... 42 2.1
14gb|AC126443.3| Mus musculus BAC clone RP23-464J8 from chromosome... 42 2.1
15gb|AC122891.4| Mus musculus BAC clone RP23-66J6 from 12, complet... 42 2.1
16emb|AL604046.8| Mouse DNA sequence from clone RP23-206D6 on chro... 42 2.1
17gb|AC068902.20| Mus musculus clone rp23-151l10, complete sequence 42 2.1
18emb|AL844167.7| Mouse DNA sequence from clone RP23-66F6 on chrom... 42 2.1
19gb|AC140431.4| Mus musculus BAC clone RP24-172K3 from chromosome... 40 8.4
20gb|AC168852.2| Mus musculus BAC clone RP24-191L21 from chromosom... 40 8.4
21gb|AC169701.1| Rhesus Macaque BAC CH250-11P19 (Children's Hospi... 40 8.4
22ref|NM_172730.1| Mus musculus RIKEN cDNA C130022K22 gene (C13002... 40 8.4
23gb|AC119943.12| Mus musculus chromosome 10, clone RP24-271F24, c... 40 8.4
24ref|XM_706323.1| Candida albicans SC5314 hypothetical protein (C... 40 8.4
25ref|NM_001040264.1| Apis mellifera adipokinetic hormone receptor... 40 8.4
26gb|AY898652.1| Apis mellifera AKH receptor mRNA, complete cds 40 8.4
27gb|AC098890.3| Mus musculus BAC clone RP23-122P22 from X, comple... 40 8.4
28ref|XM_737609.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 8.4
29gb|BC051147.1| Mus musculus RIKEN cDNA C130022K22 gene, mRNA (cD... 40 8.4
30emb|AL731537.8| Human DNA sequence from clone RP11-96B5 on chrom... 40 8.4
31emb|AL592144.5| Human DNA sequence from clone RP11-476B1 on chro... 40 8.4
32emb|AL359073.25| Human DNA sequence from clone RP11-432F4 on chr... 40 8.4
33emb|AL138931.13| Human DNA sequence from clone RP11-552K17 on ch... 40 8.4
34emb|AL139236.10| Human DNA sequence from clone RP11-165K23 on ch... 40 8.4
35emb|AJ720805.1| Gallus gallus mRNA for hypothetical protein, clo... 40 8.4
36emb|AL606783.13| Mouse DNA sequence from clone RP23-374O23 on ch... 40 8.4
37gb|AC151822.29| Medicago truncatula clone mth2-32h21, complete s... 40 8.4
38gb|AC034222.5| Homo sapiens chromosome 5 clone CTD-2062O1, compl... 40 8.4
39dbj|AK156259.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 8.4
40dbj|AK155581.1| Mus musculus B6-derived CD11 +ve dendritic cells... 40 8.4
41dbj|AK170727.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 8.4
42dbj|AK170492.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 8.4
43dbj|AK081505.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 8.4
44gb|BC038871.1| Mus musculus RIKEN cDNA C130022K22 gene, mRNA (cD... 40 8.4
45dbj|AK039818.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 40 8.4
46dbj|AK051852.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 40 8.4
47gb|AC160403.5| Mus musculus 10 BAC RP24-286J14 (Roswell Park Can... 40 8.4
48gb|AC008351.4|AC008351 Drosophila melanogaster, chromosome 2R, r... 40 8.4
49dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
50gb|AC008350.4|AC008350 Drosophila melanogaster, chromosome 2R, r... 40 8.4
51gb|DQ335470.1| Xiphophorus maculatus doublesex- and mab-3-relate... 40 8.4
52gb|AC073928.5| Homo sapiens BAC clone RP11-745P9 from 2, complet... 40 8.4
53dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
54ref|NM_001006140.1| Gallus gallus similar to C130022K22Rik prote... 40 8.4
55dbj|AK071099.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.4
56gb|AE003458.3| Drosophila melanogaster chromosome 2R, section 66... 40 8.4
57dbj|AP001648.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.4
58gb|AC147973.3| Gallus gallus BAC clone CH261-44G9 from chromosom... 40 8.4
59emb|BX088728.23| Zebrafish DNA sequence from clone CH211-126J24,... 40 8.4
60emb|AL669958.14| Mouse DNA sequence from clone RP23-213K6 on chr... 40 8.4 
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  484 bits (244), Expect = e-133
 Identities = 325/352 (92%)
 Strand = Plus / Minus

                                                                            
Query: 83       ccagattatgtatgcttttgttatgaggcctgaaagcttaccaaaatcataccgagactt 142
                |||| |||||||| |||| ||||||||||||||||||||||| ||||| |||| ||||||
Sbjct: 18451521 ccaggttatgtattctttcgttatgaggcctgaaagcttacctaaatcgtaccaagactt 18451462

                                                                            
Query: 143      catccaaaagacaggaccagttgcagaacctgtttacaaggctgtcagagatagctgcag 202
                |||||||||||| ||||||||||| |||||||||||||||||||| |||||| |||||||
Sbjct: 18451461 catccaaaagactggaccagttgcggaacctgtttacaaggctgtaagagattgctgcag 18451402

                                                                            
Query: 203      aggtggtcatgtggatctcattggcctctcagcctatttcgcaaacaagaagaattcaaa 262
                |||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||
Sbjct: 18451401 aggtggtcatgtggatctcattggtctctcagcctatttagctaacaagaagaattcaaa 18451342

                                                                            
Query: 263      tttgataaatttaacaaaaagtccatcagttattccatgttccgtgattcatgctgacag 322
                ||||||||||||||||||||||||| |  ||||||||||||| ||||| ||| |||||||
Sbjct: 18451341 tttgataaatttaacaaaaagtccacccattattccatgttctgtgatacatcctgacag 18451282

                                                                            
Query: 323      agcgtcatgcttggctcataatgttactgtcacttcatcaacattcaagaaaacattccc 382
                ||| || ||||||||||||||||| | |||| |||||||||| |||||||||||||||||
Sbjct: 18451281 agcatcgtgcttggctcataatgtcagtgtctcttcatcaacgttcaagaaaacattccc 18451222

                                                                    
Query: 383      tctgtatttctcattgacatttgtcccctttgttgttctacgtcttcaaaag 434
                ||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 18451221 tctgtatttctcattgacatttgtcccatttgttgttctacgccttcaaaag 18451170



 Score =  101 bits (51), Expect = 3e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                            
Query: 433      agtttttggaatccccagctgcaacttgctggcgtgctcttgtgggtgcagttcgctcta 492
                |||| |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 18450812 agttcttggaatcaccagctgcaacttgttggcgagctcttgtgggtgcagttcgctcta 18450753

                                                   
Query: 493      ccacttttttgtcagcgtttgtcactctcttccag 527
                | || |||||||| || ||||| ||  ||||||||
Sbjct: 18450752 cgacctttttgtctgcttttgttacattcttccag 18450718



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 75/85 (88%)
 Strand = Plus / Minus

                                                                            
Query: 532      ccatctgtttgcaccgtaaagttgcaagcaaagaccacaaacttgtgtattggtttggtg 591
                ||||||||||||| ||||||||||||| ||||||||||||  ||||||| ||||||| ||
Sbjct: 18450636 ccatctgtttgcatcgtaaagttgcaaccaaagaccacaagtttgtgtactggtttgctg 18450577

                                         
Query: 592      gtttagtgtctggtctttcgattct 616
                || |  ||||||||||||| |||||
Sbjct: 18450576 gtctgatgtctggtctttctattct 18450552



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                            
Query: 3        gcaaagtctaaaaatagattccacttctggggtagccattggagacatggagatgcatta 62
                ||||||||||| || ||||| ||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 18451690 gcaaagtctaagaacagatttcacttttggggaagccattggaggcatggagatgcatta 18451631

                     
Query: 63       ctttt 67
                |||||
Sbjct: 18451630 ctttt 18451626
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>dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1058_B11
          Length = 102824

 Score =  484 bits (244), Expect = e-133
 Identities = 325/352 (92%)
 Strand = Plus / Minus

                                                                         
Query: 83    ccagattatgtatgcttttgttatgaggcctgaaagcttaccaaaatcataccgagactt 142
             |||| |||||||| |||| ||||||||||||||||||||||| ||||| |||| ||||||
Sbjct: 43369 ccaggttatgtattctttcgttatgaggcctgaaagcttacctaaatcgtaccaagactt 43310

                                                                         
Query: 143   catccaaaagacaggaccagttgcagaacctgtttacaaggctgtcagagatagctgcag 202
             |||||||||||| ||||||||||| |||||||||||||||||||| |||||| |||||||
Sbjct: 43309 catccaaaagactggaccagttgcggaacctgtttacaaggctgtaagagattgctgcag 43250

                                                                         
Query: 203   aggtggtcatgtggatctcattggcctctcagcctatttcgcaaacaagaagaattcaaa 262
             |||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||
Sbjct: 43249 aggtggtcatgtggatctcattggtctctcagcctatttagctaacaagaagaattcaaa 43190

                                                                         
Query: 263   tttgataaatttaacaaaaagtccatcagttattccatgttccgtgattcatgctgacag 322
             ||||||||||||||||||||||||| |  ||||||||||||| ||||| ||| |||||||
Sbjct: 43189 tttgataaatttaacaaaaagtccacccattattccatgttctgtgatacatcctgacag 43130

                                                                         
Query: 323   agcgtcatgcttggctcataatgttactgtcacttcatcaacattcaagaaaacattccc 382
             ||| || ||||||||||||||||| | |||| |||||||||| |||||||||||||||||
Sbjct: 43129 agcatcgtgcttggctcataatgtcagtgtctcttcatcaacgttcaagaaaacattccc 43070

                                                                 
Query: 383   tctgtatttctcattgacatttgtcccctttgttgttctacgtcttcaaaag 434
             ||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 43069 tctgtatttctcattgacatttgtcccatttgttgttctacgccttcaaaag 43018



 Score =  101 bits (51), Expect = 3e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                         
Query: 433   agtttttggaatccccagctgcaacttgctggcgtgctcttgtgggtgcagttcgctcta 492
             |||| |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 42660 agttcttggaatcaccagctgcaacttgttggcgagctcttgtgggtgcagttcgctcta 42601

                                                
Query: 493   ccacttttttgtcagcgtttgtcactctcttccag 527
             | || |||||||| || ||||| ||  ||||||||
Sbjct: 42600 cgacctttttgtctgcttttgttacattcttccag 42566



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 75/85 (88%)
 Strand = Plus / Minus

                                                                         
Query: 532   ccatctgtttgcaccgtaaagttgcaagcaaagaccacaaacttgtgtattggtttggtg 591
             ||||||||||||| ||||||||||||| ||||||||||||  ||||||| ||||||| ||
Sbjct: 42484 ccatctgtttgcatcgtaaagttgcaaccaaagaccacaagtttgtgtactggtttgctg 42425

                                      
Query: 592   gtttagtgtctggtctttcgattct 616
             || |  ||||||||||||| |||||
Sbjct: 42424 gtctgatgtctggtctttctattct 42400



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                         
Query: 3     gcaaagtctaaaaatagattccacttctggggtagccattggagacatggagatgcatta 62
             ||||||||||| || ||||| ||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 43538 gcaaagtctaagaacagatttcacttttggggaagccattggaggcatggagatgcatta 43479

                  
Query: 63    ctttt 67
             |||||
Sbjct: 43478 ctttt 43474
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>dbj|AK059085.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B03, full
           insert sequence
          Length = 821

 Score =  212 bits (107), Expect = 1e-51
 Identities = 179/203 (88%)
 Strand = Plus / Plus

                                                                       
Query: 414 gttgttctacgtcttcaaaagtttttggaatccccagctgcaacttgctggcgtgctctt 473
           ||||||||||| ||||||||||| |||||||| |||||||||||||| ||||| ||||||
Sbjct: 1   gttgttctacgccttcaaaagttcttggaatcaccagctgcaacttgttggcgagctctt 60

                                                                       
Query: 474 gtgggtgcagttcgctctaccacttttttgtcagcgtttgtcactctcttccagtctacc 533
           |||||||||||||||||||| || |||||||| || ||||| ||  |||||||| || ||
Sbjct: 61  gtgggtgcagttcgctctacgacctttttgtctgcttttgttacattcttccaggctgcc 120

                                                                       
Query: 534 atctgtttgcaccgtaaagttgcaagcaaagaccacaaacttgtgtattggtttggtggt 593
           ||||||||||| ||||||||||||| ||||||||||||  ||||||| ||||||| ||||
Sbjct: 121 atctgtttgcatcgtaaagttgcaaccaaagaccacaagtttgtgtactggtttgctggt 180

                                  
Query: 594 ttagtgtctggtctttcgattct 616
            |  ||||||||||||| |||||
Sbjct: 181 ctgatgtctggtctttctattct 203
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>ref|NM_124494.1| Arabidopsis thaliana unknown protein AT5G51150 mRNA, complete cds
          Length = 1959

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 148/181 (81%)
 Strand = Plus / Plus

                                                                       
Query: 30  tggggtagccattggagacatggagatgcattacttttctctgtcgcatctgcccagatt 89
           ||||||||||||||||||||||||||| | |||||||| ||| | |||| ||| ||| ||
Sbjct: 675 tggggtagccattggagacatggagattcgttacttttttctcttgcatgtgctcaggtt 734

                                                                       
Query: 90  atgtatgcttttgttatgaggcctgaaagcttaccaaaatcataccgagacttcatccaa 149
           |||||| | ||| | ||| | ||||||| ||| |||||||||||  |||| || || || 
Sbjct: 735 atgtattcctttataatgcgtcctgaaaccttgccaaaatcatatagagaatttattcag 794

                                                                       
Query: 150 aagacaggaccagttgcagaacctgtttacaaggctgtcagagatagctgcagaggtggt 209
           ||||| || |||||||||   ||||| ||| | ||||| |||||  ||||||||||||||
Sbjct: 795 aagactggtccagttgcaaggcctgtctaccaagctgtaagagagtgctgcagaggtggt 854

            
Query: 210 c 210
           |
Sbjct: 855 c 855



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                        
Query: 363  acattcaagaaaacattccctctgtatttctcattgacatttgtcccctttgttgttcta 422
            ||||||||||||||||| ||  | ||||||||  |||| |||||||| | ||||||||||
Sbjct: 1008 acattcaagaaaacatttccattatatttctccctgacttttgtcccatatgttgttcta 1067

             
Query: 423  c 423
            |
Sbjct: 1068 c 1068



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 549  aaagttgcaagcaaagaccacaaacttgtgtattggtttg 588
            |||||||||| |||||||||||| || || ||||||||||
Sbjct: 1194 aaagttgcaaccaaagaccacaagctcgtttattggtttg 1233
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>gb|AY091374.1| Arabidopsis thaliana unknown protein (At5g51150) mRNA, complete cds
          Length = 1627

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 148/181 (81%)
 Strand = Plus / Plus

                                                                       
Query: 30  tggggtagccattggagacatggagatgcattacttttctctgtcgcatctgcccagatt 89
           ||||||||||||||||||||||||||| | |||||||| ||| | |||| ||| ||| ||
Sbjct: 625 tggggtagccattggagacatggagattcgttacttttttctcttgcatgtgctcaggtt 684

                                                                       
Query: 90  atgtatgcttttgttatgaggcctgaaagcttaccaaaatcataccgagacttcatccaa 149
           |||||| | ||| | ||| | ||||||| ||| |||||||||||  |||| || || || 
Sbjct: 685 atgtattcctttataatgcgtcctgaaaccttgccaaaatcatatagagaatttattcag 744

                                                                       
Query: 150 aagacaggaccagttgcagaacctgtttacaaggctgtcagagatagctgcagaggtggt 209
           ||||| || |||||||||   ||||| ||| | ||||| |||||  ||||||||||||||
Sbjct: 745 aagactggtccagttgcaaggcctgtctaccaagctgtaagagagtgctgcagaggtggt 804

            
Query: 210 c 210
           |
Sbjct: 805 c 805



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                        
Query: 363  acattcaagaaaacattccctctgtatttctcattgacatttgtcccctttgttgttcta 422
            ||||||||||||||||| ||  | ||||||||  |||| |||||||| | ||||||||||
Sbjct: 958  acattcaagaaaacatttccattatatttctccctgacttttgtcccatatgttgttcta 1017

             
Query: 423  c 423
            |
Sbjct: 1018 c 1018



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 549  aaagttgcaagcaaagaccacaaacttgtgtattggtttg 588
            |||||||||| |||||||||||| || || ||||||||||
Sbjct: 1144 aaagttgcaaccaaagaccacaagctcgtttattggtttg 1183
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>gb|AY045838.1| Arabidopsis thaliana unknown protein (At5g51150) mRNA, complete cds
          Length = 1975

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 148/181 (81%)
 Strand = Plus / Plus

                                                                       
Query: 30  tggggtagccattggagacatggagatgcattacttttctctgtcgcatctgcccagatt 89
           ||||||||||||||||||||||||||| | |||||||| ||| | |||| ||| ||| ||
Sbjct: 675 tggggtagccattggagacatggagattcgttacttttttctcttgcatgtgctcaggtt 734

                                                                       
Query: 90  atgtatgcttttgttatgaggcctgaaagcttaccaaaatcataccgagacttcatccaa 149
           |||||| | ||| | ||| | ||||||| ||| |||||||||||  |||| || || || 
Sbjct: 735 atgtattcctttataatgcgtcctgaaaccttgccaaaatcatatagagaatttattcag 794

                                                                       
Query: 150 aagacaggaccagttgcagaacctgtttacaaggctgtcagagatagctgcagaggtggt 209
           ||||| || |||||||||   ||||| ||| | ||||| |||||  ||||||||||||||
Sbjct: 795 aagactggtccagttgcaaggcctgtctaccaagctgtaagagagtgctgcagaggtggt 854

            
Query: 210 c 210
           |
Sbjct: 855 c 855



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                        
Query: 363  acattcaagaaaacattccctctgtatttctcattgacatttgtcccctttgttgttcta 422
            ||||||||||||||||| ||  | ||||||||  |||| |||||||| | ||||||||||
Sbjct: 1008 acattcaagaaaacatttccattatatttctccctgacttttgtcccatatgttgttcta 1067

             
Query: 423  c 423
            |
Sbjct: 1068 c 1068



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 549  aaagttgcaagcaaagaccacaaacttgtgtattggtttg 588
            |||||||||| |||||||||||| || || ||||||||||
Sbjct: 1194 aaagttgcaaccaaagaccacaagctcgtttattggtttg 1233
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>dbj|AB023044.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWD22
          Length = 87180

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                   
Query: 30    tggggtagccattggagacatggagatgcattactttt 67
             ||||||||||||||||||||||||||| | ||||||||
Sbjct: 23825 tggggtagccattggagacatggagattcgttactttt 23862



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                         
Query: 363   acattcaagaaaacattccctctgtatttctcattgacatttgtcccctttgttgttcta 422
             ||||||||||||||||| ||  | ||||||||  |||| |||||||| | ||||||||||
Sbjct: 24315 acattcaagaaaacatttccattatatttctccctgacttttgtcccatatgttgttcta 24374

              
Query: 423   c 423
             |
Sbjct: 24375 c 24375



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 549   aaagttgcaagcaaagaccacaaacttgtgtattggtttg 588
             |||||||||| |||||||||||| || || ||||||||||
Sbjct: 24715 aaagttgcaaccaaagaccacaagctcgtttattggtttg 24754



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 81/100 (81%)
 Strand = Plus / Plus

                                                                         
Query: 111   cctgaaagcttaccaaaatcataccgagacttcatccaaaagacaggaccagttgcagaa 170
             ||||||| ||| |||||||||||  |||| || || || ||||| || |||||||||   
Sbjct: 24063 cctgaaaccttgccaaaatcatatagagaatttattcagaagactggtccagttgcaagg 24122

                                                     
Query: 171   cctgtttacaaggctgtcagagatagctgcagaggtggtc 210
             ||||| ||| | ||||| |||||  |||||||||||||||
Sbjct: 24123 cctgtctaccaagctgtaagagagtgctgcagaggtggtc 24162
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>gb|AC104658.6| Homo sapiens BAC clone RP11-593M6 from 4, complete sequence
          Length = 140028

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 261   aatttgataaatttaacaaaaagt 284
             ||||||||||||||||||||||||
Sbjct: 66426 aatttgataaatttaacaaaaagt 66403
to top
>gb|AC121869.2| Mus musculus BAC clone RP24-121C10 from 17, complete sequence
          Length = 182237

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 87    attatgtatgcttttgttatga 108
             ||||||||||||||||||||||
Sbjct: 42152 attatgtatgcttttgttatga 42131
to top
>ref|XM_758430.1| Theileria parva strain Muguga chromosome 3 hypothetical protein
           (TP03_0495) partial mRNA
          Length = 731

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 279 aaaagtccatcagttattccat 300
           ||||||||||||||||||||||
Sbjct: 641 aaaagtccatcagttattccat 662
to top
>ref|XM_758431.1| Theileria parva strain Muguga chromosome 3 hypothetical protein
            (TP03_0496) partial mRNA
          Length = 1184

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 279  aaaagtccatcagttattccat 300
            ||||||||||||||||||||||
Sbjct: 1156 aaaagtccatcagttattccat 1135
to top
>gb|AC114933.2| Homo sapiens chromosome 5 clone CTD-2023M8, complete sequence
          Length = 177958

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 262   atttgataaatttaacaaaaag 283
             ||||||||||||||||||||||
Sbjct: 88470 atttgataaatttaacaaaaag 88491
to top
>gb|AC151601.5| Mus musculus BAC clone RP23-241H10 from chromosome 7, complete sequence
          Length = 187463

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 584   gtttggtggtttagtgtctgg 604
             |||||||||||||||||||||
Sbjct: 10586 gtttggtggtttagtgtctgg 10566
to top
>gb|AC126443.3| Mus musculus BAC clone RP23-464J8 from chromosome 7, complete sequence
          Length = 192927

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 584    gtttggtggtttagtgtctgg 604
              |||||||||||||||||||||
Sbjct: 130903 gtttggtggtttagtgtctgg 130883



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 584   gtttggtggtttagtgtctgg 604
             |||||||||||||||||||||
Sbjct: 50021 gtttggtggtttagtgtctgg 50001
to top
>gb|AC122891.4| Mus musculus BAC clone RP23-66J6 from 12, complete sequence
          Length = 205784

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 261    aatttgataaatttaacaaaa 281
              |||||||||||||||||||||
Sbjct: 109708 aatttgataaatttaacaaaa 109728
to top
>emb|AL604046.8| Mouse DNA sequence from clone RP23-206D6 on chromosome 11 Contains the
             genes for olfactory receptor MOR135-14 and -3 , two
             olfactory receptor MOR135 pseudogenes, the gene for a
             novel olfactory receptor family MOR135 member, a zinc
             finger protein pseudogene, the 5' end of the gene for a
             novel KRAB box domain containing protein and a CpG island,
             complete sequence
          Length = 194873

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 580   attggtttggtggtttagtgtctgg 604
             ||||||||||||||||||| |||||
Sbjct: 85377 attggtttggtggtttagtctctgg 85353
to top
>gb|AC068902.20| Mus musculus clone rp23-151l10, complete sequence
          Length = 199514

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 580   attggtttggtggtttagtgtctgg 604
             ||||||||||||||||||| |||||
Sbjct: 17454 attggtttggtggtttagtctctgg 17430
to top
>emb|AL844167.7| Mouse DNA sequence from clone RP23-66F6 on chromosome 2, complete
            sequence
          Length = 232834

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 251  gaagaattcaaatttgataaa 271
            |||||||||||||||||||||
Sbjct: 8171 gaagaattcaaatttgataaa 8191
to top
>gb|AC140431.4| Mus musculus BAC clone RP24-172K3 from chromosome 7, complete sequence
          Length = 172958

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 586   ttggtggtttagtgtctggt 605
             ||||||||||||||||||||
Sbjct: 73073 ttggtggtttagtgtctggt 73054
to top
>gb|AC168852.2| Mus musculus BAC clone RP24-191L21 from chromosome 6, complete sequence
          Length = 171677

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 239   tttcgcaaacaagaagaattcaaa 262
             ||||| ||||||||||||||||||
Sbjct: 89843 tttcgaaaacaagaagaattcaaa 89866
to top
>gb|AC169701.1| Rhesus Macaque  BAC CH250-11P19 (Children's Hospital Oakland Research
             Institute Rhesus macaque Adult Male BAC Library) complete
             sequence
          Length = 166264

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 429   caaaagtttttggaatcccc 448
             ||||||||||||||||||||
Sbjct: 34133 caaaagtttttggaatcccc 34152
to top
>ref|NM_172730.1| Mus musculus RIKEN cDNA C130022K22 gene (C130022K22Rik), mRNA
          Length = 4403

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 239 tttcgcaaacaagaagaattcaaa 262
           ||||| ||||||||||||||||||
Sbjct: 140 tttcgaaaacaagaagaattcaaa 163
to top
>gb|AC119943.12| Mus musculus chromosome 10, clone RP24-271F24, complete sequence
          Length = 174009

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 239   tttcgcaaacaagaagaattcaaa 262
             ||||| ||||||||||||||||||
Sbjct: 37419 tttcgaaaacaagaagaattcaaa 37442
to top
>ref|XM_706323.1| Candida albicans SC5314 hypothetical protein (CaO19.6662), mRNA
          Length = 546

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 398 gacatttgtcccctttgttg 417
           ||||||||||||||||||||
Sbjct: 153 gacatttgtcccctttgttg 172
to top
>ref|NM_001040264.1| Apis mellifera adipokinetic hormone receptor (LOC551388), mRNA
          Length = 1600

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 258  tcaaatttgataaatttaac 277
            ||||||||||||||||||||
Sbjct: 1346 tcaaatttgataaatttaac 1327
to top
>gb|AY898652.1| Apis mellifera AKH receptor mRNA, complete cds
          Length = 1600

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 258  tcaaatttgataaatttaac 277
            ||||||||||||||||||||
Sbjct: 1346 tcaaatttgataaatttaac 1327
to top
>gb|AC098890.3| Mus musculus BAC clone RP23-122P22 from X, complete sequence
          Length = 202740

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 581   ttggtttggtggtttagtgtctgg 604
             |||||||||||||||||| |||||
Sbjct: 72371 ttggtttggtggtttagtctctgg 72348
to top
>ref|XM_737609.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000050.00.0)
            partial mRNA
          Length = 2289

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 259  caaatttgataaatttaacaaaaa 282
            ||||||| ||||||||||||||||
Sbjct: 1662 caaattttataaatttaacaaaaa 1685
to top
>gb|BC051147.1| Mus musculus RIKEN cDNA C130022K22 gene, mRNA (cDNA clone MGC:58539
           IMAGE:6595828), complete cds
          Length = 1771

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 239 tttcgcaaacaagaagaattcaaa 262
           ||||| ||||||||||||||||||
Sbjct: 153 tttcgaaaacaagaagaattcaaa 176
to top
>emb|AL731537.8| Human DNA sequence from clone RP11-96B5 on chromosome 10 Contains a
             novel pseudogene, the 5' end of the PRKG1 gene for protein
             kinase cGMP-dependent type I, a novel gene and two CpG
             islands, complete sequence
          Length = 189082

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   agatagctgcagaggtggtc 210
             ||||||||||||||||||||
Sbjct: 55978 agatagctgcagaggtggtc 55959
to top
>emb|AL592144.5| Human DNA sequence from clone RP11-476B1 on chromosome 1 Contains a novel
              gene, complete sequence
          Length = 197322

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 427    ttcaaaagtttttggaatcc 446
              ||||||||||||||||||||
Sbjct: 128003 ttcaaaagtttttggaatcc 127984
to top
>emb|AL359073.25| Human DNA sequence from clone RP11-432F4 on chromosome 9 Contains the
             5' end of the gene for regulator of differentiation 1
             (ROD1), a ribosomal protein L32 (RPL32) pseudogene and a
             CpG island.n, complete sequence
          Length = 64850

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   aattcaaatttgataaattt 274
             ||||||||||||||||||||
Sbjct: 22621 aattcaaatttgataaattt 22640
to top
>emb|AL138931.13| Human DNA sequence from clone RP11-552K17 on chromosome 1 Contains
            part of the SLICK gene for a sodium- and
            chloride-activated ATP-sensitive potassium channel,
            complete sequence
          Length = 97681

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 260  aaatttgataaatttaacaaaaag 283
            |||| |||||||||||||||||||
Sbjct: 5373 aaatatgataaatttaacaaaaag 5350
to top
>emb|AL139236.10| Human DNA sequence from clone RP11-165K23 on chromosome 10, complete
             sequence
          Length = 123701

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   gaagaattcaaatttgataa 270
             ||||||||||||||||||||
Sbjct: 42856 gaagaattcaaatttgataa 42837
to top
>emb|AJ720805.1| Gallus gallus mRNA for hypothetical protein, clone 26a16
          Length = 2279

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 242 cgcaaacaagaagaattcaa 261
           ||||||||||||||||||||
Sbjct: 112 cgcaaacaagaagaattcaa 131
to top
>emb|AL606783.13| Mouse DNA sequence from clone RP23-374O23 on chromosome 13 Contains
             part of the gene for a novel protein similar to axonemal
             dynein heavy polypeptide (DNAH), complete sequence
          Length = 127451

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 585   tttggtggtttagtgtctgg 604
             ||||||||||||||||||||
Sbjct: 80042 tttggtggtttagtgtctgg 80023
to top
>gb|AC151822.29| Medicago truncatula clone mth2-32h21, complete sequence
          Length = 118094

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   aatttgataaatttaacaaa 280
             ||||||||||||||||||||
Sbjct: 67751 aatttgataaatttaacaaa 67732
to top
>gb|AC034222.5| Homo sapiens chromosome 5 clone CTD-2062O1, complete sequence
          Length = 140927

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   ctctgtatttctcattgaca 401
             ||||||||||||||||||||
Sbjct: 79419 ctctgtatttctcattgaca 79400
to top
>dbj|AK156259.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830014A20 product:hypothetical protein,
           full insert sequence
          Length = 1730

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 239 tttcgcaaacaagaagaattcaaa 262
           ||||| ||||||||||||||||||
Sbjct: 142 tttcgaaaacaagaagaattcaaa 165
to top
>dbj|AK155581.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F730001K17
           product:hypothetical protein, full insert sequence
          Length = 3961

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 239 tttcgcaaacaagaagaattcaaa 262
           ||||| ||||||||||||||||||
Sbjct: 138 tttcgaaaacaagaagaattcaaa 161
to top
>dbj|AK170727.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630116G11
           product:hypothetical protein, full insert sequence
          Length = 871

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 239 tttcgcaaacaagaagaattcaaa 262
           ||||| ||||||||||||||||||
Sbjct: 145 tttcgaaaacaagaagaattcaaa 168
to top
>dbj|AK170492.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630105K24
           product:hypothetical protein, full insert sequence
          Length = 3970

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 239 tttcgcaaacaagaagaattcaaa 262
           ||||| ||||||||||||||||||
Sbjct: 138 tttcgaaaacaagaagaattcaaa 161
to top
>dbj|AK081505.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
           library, clone:C130022K22 product:hypothetical protein,
           full insert sequence
          Length = 4403

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 239 tttcgcaaacaagaagaattcaaa 262
           ||||| ||||||||||||||||||
Sbjct: 140 tttcgaaaacaagaagaattcaaa 163
to top
>gb|BC038871.1| Mus musculus RIKEN cDNA C130022K22 gene, mRNA (cDNA clone
           IMAGE:1395122), partial cds
          Length = 881

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 239 tttcgcaaacaagaagaattcaaa 262
           ||||| ||||||||||||||||||
Sbjct: 135 tttcgaaaacaagaagaattcaaa 158
to top
>dbj|AK039818.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A430008A03 product:HYPOTHETICAL 42.9 KDA
           PROTEIN homolog [Homo sapiens], full insert sequence
          Length = 918

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 239 tttcgcaaacaagaagaattcaaa 262
           ||||| ||||||||||||||||||
Sbjct: 138 tttcgaaaacaagaagaattcaaa 161
to top
>dbj|AK051852.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length
           enriched library, clone:D230010K08
           product:unclassifiable, full insert sequence
          Length = 821

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 239 tttcgcaaacaagaagaattcaaa 262
           ||||| ||||||||||||||||||
Sbjct: 95  tttcgaaaacaagaagaattcaaa 118
to top
>gb|AC160403.5| Mus musculus 10 BAC RP24-286J14 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 180869

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 239    tttcgcaaacaagaagaattcaaa 262
              ||||| ||||||||||||||||||
Sbjct: 116464 tttcgaaaacaagaagaattcaaa 116487
to top
>gb|AC008351.4|AC008351 Drosophila melanogaster, chromosome 2R, region 59A-59C, BAC clone
            BACR09K23, complete sequence
          Length = 191438

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 580  attggtttggtggtttagtg 599
            ||||||||||||||||||||
Sbjct: 3880 attggtttggtggtttagtg 3899
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 88       ttatgtatgcttttgttatg 107
                ||||||||||||||||||||
Sbjct: 29528760 ttatgtatgcttttgttatg 29528741
to top
>gb|AC008350.4|AC008350 Drosophila melanogaster, chromosome 2R, region 58E-59A, BAC clone
              BACR11M08, complete sequence
          Length = 169534

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 580    attggtttggtggtttagtg 599
              ||||||||||||||||||||
Sbjct: 156592 attggtttggtggtttagtg 156611
to top
>gb|DQ335470.1| Xiphophorus maculatus doublesex- and mab-3-related transcription
            factor 5 (dmrt5) gene, complete cds
          Length = 5248

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 245  aaacaagaagaattcaaatt 264
            ||||||||||||||||||||
Sbjct: 2180 aaacaagaagaattcaaatt 2161
to top
>gb|AC073928.5| Homo sapiens BAC clone RP11-745P9 from 2, complete sequence
          Length = 138943

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 260  aaatttgataaatttaacaa 279
            ||||||||||||||||||||
Sbjct: 9241 aaatttgataaatttaacaa 9222
to top
>dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0456F08
          Length = 156850

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    ttatgtatgcttttgttatg 107
             ||||||||||||||||||||
Sbjct: 95034 ttatgtatgcttttgttatg 95015
to top
>ref|NM_001006140.1| Gallus gallus similar to C130022K22Rik protein (LOC416044), mRNA
          Length = 2279

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 242 cgcaaacaagaagaattcaa 261
           ||||||||||||||||||||
Sbjct: 112 cgcaaacaagaagaattcaa 131
to top
>dbj|AK071099.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081K01, full
           insert sequence
          Length = 1682

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  ttatgtatgcttttgttatg 107
           ||||||||||||||||||||
Sbjct: 514 ttatgtatgcttttgttatg 533
to top
>gb|AE003458.3| Drosophila melanogaster chromosome 2R, section 66 of 73 of the complete
              sequence
          Length = 302225

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 580    attggtttggtggtttagtg 599
              ||||||||||||||||||||
Sbjct: 167074 attggtttggtggtttagtg 167093
to top
>dbj|AP001648.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-736L3, complete
             sequence
          Length = 166013

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 366   ttcaagaaaacattccctct 385
             ||||||||||||||||||||
Sbjct: 33142 ttcaagaaaacattccctct 33123
to top
>gb|AC147973.3| Gallus gallus BAC clone CH261-44G9 from chromosome unknown, complete
             sequence
          Length = 196590

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 341   taatgttactgtcacttcat 360
             ||||||||||||||||||||
Sbjct: 55433 taatgttactgtcacttcat 55452
to top
>emb|BX088728.23| Zebrafish DNA sequence from clone CH211-126J24, complete sequence
          Length = 168184

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     ttatgtatgcttttgttatg 107
              ||||||||||||||||||||
Sbjct: 127057 ttatgtatgcttttgttatg 127076
to top
>emb|AL669958.14| Mouse DNA sequence from clone RP23-213K6 on chromosome X, complete
              sequence
          Length = 195411

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 581    ttggtttggtggtttagtgtctgg 604
              |||||||||||||||||| |||||
Sbjct: 139297 ttggtttggtggtttagtctctgg 139274


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,540,817
Number of Sequences: 3902068
Number of extensions: 6540817
Number of successful extensions: 138947
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 138760
Number of HSP's gapped (non-prelim): 187
length of query: 617
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 594
effective length of database: 17,143,297,704
effective search space: 10183118836176
effective search space used: 10183118836176
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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