ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags37c13 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK069830.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030M09, full insert sequence Length = 778 Score = 402 bits (203), Expect = e-109 Identities = 376/433 (86%), Gaps = 3/433 (0%) Strand = Plus / Plus Query: 17 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 76 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| |||| Sbjct: 65 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcctcc 121 Query: 77 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 136 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 122 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 181 Query: 137 ccatccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatct 196 | |||||||||| |||||||||||| |||||||||| |||||| | || ||||||| Sbjct: 182 gcgtccacaaggatgccaagttctgggcggacaagaagaggttcggcgcggaagccatct 241 Query: 197 acggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaa 256 ||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||| Sbjct: 242 acggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaa 301 Query: 257 ggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttgg 316 ||||||| ||||||||||| ||||||||||| |||||||||||| |||| |||||||| | Sbjct: 302 ggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttag 361 Query: 317 atgattttggatttgaagattaccttaacttgccccaagactctgacagcctgcgcgtac 376 |||||||||| ||||||||||| ||||||||||||||||| ||||| ||| | || | | Sbjct: 362 atgattttgggtttgaagattatcttaacttgccccaagattctgaaagcttccgtgctc 421 Query: 377 cggacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgcccca 436 | |||||||||||||| |||||||||||||| || |||| |||||||| | ||||| | Sbjct: 422 ccgacatgcaccacggaatggaggttcgcctcggtttgtcaaagggacctgtttgcccta 481 Query: 437 gtttcaattgatt 449 ||||||||||||| Sbjct: 482 gtttcaattgatt 494
>ref|XM_463066.1| Oryza sativa (japonica cultivar-group), mRNA Length = 846 Score = 361 bits (182), Expect = 2e-96 Identities = 314/358 (87%) Strand = Plus / Plus Query: 42 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 101 |||||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||| Sbjct: 21 gaagaaggaggtcggcgagaaccacgacgtgctcctcttcggcgtcaacaacagcgtcaa 80 Query: 102 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaaggagtccaagttctg 161 ||||||||||||||| |||||| |||||||| || ||||||||||| |||||||||| Sbjct: 81 gggcgacctcgcgccgcagcacccgatccaggccaccgtccacaaggaggccaagttctg 140 Query: 162 ggacgacaagaagaagttcgggaccgaggccatctacggatccgccttcaacatccgcaa 221 || || ||||||| ||||||| | || ||||||||||||||||| |||||||||||||| Sbjct: 141 ggcggataagaagaggttcggggcggaagccatctacggatccgctttcaacatccgcaa 200 Query: 222 ggatctcgacgcccagatcctctccaggttccaaaggcccccaggtgcattgccatcatc 281 ||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 201 ggatctcgatgcccaaatcctctccaagttccaaaggccccctggtgcattgccatcatc 260 Query: 282 tatgctgggatatgaggcaatgacaggttccttggatgattttggatttgaagattacct 341 |||||| ||||| ||||| |||| ||||||||||||||||| || ||||||||||| || Sbjct: 261 tatgctaggatacgaggcgctgactggttccttggatgatttcgggtttgaagattatct 320 Query: 342 taacttgccccaagactctgacagcctgcgcgtaccggacatgcaccacgggatggag 399 |||||||||||||| ||||||||| | | | || |||||||||||||| |||||| Sbjct: 321 caacttgccccaagattctgacagcttccatgctccagacatgcaccacggaatggag 378
>dbj|AK072342.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052N08, full insert sequence Length = 3232 Score = 333 bits (168), Expect = 4e-88 Identities = 290/330 (87%), Gaps = 3/330 (0%) Strand = Plus / Plus Query: 17 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 76 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 47 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 103 Query: 77 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 136 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 104 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 163 Query: 137 ccatccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatct 196 | ||||||||||| |||||||||||| |||||||||| |||||| | || ||||||| Sbjct: 164 gcgtccacaaggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatct 223 Query: 197 acggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaa 256 ||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||| Sbjct: 224 acggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaa 283 Query: 257 ggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttgg 316 ||||||| ||||||||||| ||||||||||| |||||||||||| |||| |||||||| | Sbjct: 284 ggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttag 343 Query: 317 atgattttggatttgaagattaccttaact 346 |||||||||| ||||||||||| ||||||| Sbjct: 344 atgattttgggtttgaagattatcttaact 373
>dbj|AK072332.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038L20, full insert sequence Length = 4792 Score = 333 bits (168), Expect = 4e-88 Identities = 290/330 (87%), Gaps = 3/330 (0%) Strand = Plus / Plus Query: 17 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 76 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 33 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 89 Query: 77 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 136 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 90 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 149 Query: 137 ccatccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatct 196 | ||||||||||| |||||||||||| |||||||||| |||||| | || ||||||| Sbjct: 150 gcgtccacaaggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatct 209 Query: 197 acggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaa 256 ||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||| Sbjct: 210 acggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaa 269 Query: 257 ggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttgg 316 ||||||| ||||||||||| ||||||||||| |||||||||||| |||| |||||||| | Sbjct: 270 ggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttag 329 Query: 317 atgattttggatttgaagattaccttaact 346 |||||||||| ||||||||||| ||||||| Sbjct: 330 atgattttgggtttgaagattatcttaact 359
>dbj|AK067815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118P06, full insert sequence Length = 3020 Score = 333 bits (168), Expect = 4e-88 Identities = 290/330 (87%), Gaps = 3/330 (0%) Strand = Plus / Plus Query: 17 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 76 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 32 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 88 Query: 77 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 136 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 89 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 148 Query: 137 ccatccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatct 196 | ||||||||||| |||||||||||| |||||||||| |||||| | || ||||||| Sbjct: 149 gcgtccacaaggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatct 208 Query: 197 acggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaa 256 ||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||| Sbjct: 209 acggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaa 268 Query: 257 ggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttgg 316 ||||||| ||||||||||| ||||||||||| |||||||||||| |||| |||||||| | Sbjct: 269 ggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttag 328 Query: 317 atgattttggatttgaagattaccttaact 346 |||||||||| ||||||||||| ||||||| Sbjct: 329 atgattttgggtttgaagattatcttaact 358
>gb|AY105712.1| Zea mays PCO130616 mRNA sequence Length = 981 Score = 329 bits (166), Expect = 6e-87 Identities = 346/406 (85%) Strand = Plus / Plus Query: 42 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 101 ||||| |||| || |||||||||||||| |||||||||||| |||| | | ||||| Sbjct: 105 gaagagggagatcagcgagacccacgacaccctccgcttcggcctcaatgccggcgtcaa 164 Query: 102 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaaggagtccaagttctg 161 | ||||||||||||| ||||||| ||||| || |||||| |||| |||||||||| Sbjct: 165 ggccgacctcgcgccgccgcacccgctccagtccagcatccaatcggaggccaagttctg 224 Query: 162 ggacgacaagaagaagttcgggaccgaggccatctacggatccgccttcaacatccgcaa 221 || |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 225 ggcggacaagaagaagtttgggacagaggccatctacggatccgccttgaacatccgcaa 284 Query: 222 ggatctcgacgcccagatcctctccaggttccaaaggcccccaggtgcattgccatcatc 281 ||||||||| ||||| |||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 285 ggatctcgatgcccaaatcctctcaaggttccaaaggccccctggtgctttgccatcatc 344 Query: 282 tatgctgggatatgaggcaatgacaggttccttggatgattttggatttgaagattacct 341 | |||| |||||||||||| ||||||||||| | ||||||||||| ||||||||||| || Sbjct: 345 tctgcttggatatgaggcactgacaggttccctagatgattttggttttgaagattatct 404 Query: 342 taacttgccccaagactctgacagcctgcgcgtaccggacatgcaccacgggatggaggt 401 |||| |||| ||||| ||||| | | || ||| |||||||||||||| |||||||| Sbjct: 405 taacatgcctcaagattctgaaggtttccgtcaacctgacatgcaccacggaatggaggt 464 Query: 402 tcgccttggcctgtccaagggacccatctgccccagtttcaattga 447 ||||||||| ||||||||||||| |||||||| || |||| |||| Sbjct: 465 tcgccttggtttgtccaagggacctatctgccctagcttcagttga 510
>gb|BT016426.1| Zea mays clone Contig259 mRNA sequence Length = 643 Score = 301 bits (152), Expect = 1e-78 Identities = 317/372 (85%) Strand = Plus / Plus Query: 76 cgcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggcc 135 ||||||||| |||||| | ||||| | ||||||||| ||| ||||||| ||||| | Sbjct: 117 cgcttcggcatcaacgccggcgtcaaagccgacctcgccccgccgcacccgctccagtct 176 Query: 136 gccatccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatc 195 ||||||| |||| |||||||||||| |||||||||||||||||||| || ||||| Sbjct: 177 accatccaatcggagaccaagttctgggcggacaagaagaagttcgggacagatgccata 236 Query: 196 tacggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaa 255 || ||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 237 tatggatccgccctcaacatccgcaaggatctcgatgcccaaatcctctccaggttccaa 296 Query: 256 aggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttg 315 |||||||| ||||| ||||| |||||| |||| ||||| |||||| ||||||||||| || Sbjct: 297 aggccccctggtgctttgccgtcatctctgcttggatacgaggcactgacaggttccctg 356 Query: 316 gatgattttggatttgaagattaccttaacttgccccaagactctgacagcctgcgcgta 375 ||||||||||||||||||||||| |||||| |||| || || |||||||| | || | Sbjct: 357 gatgattttggatttgaagattatcttaacatgcctcatgattctgacagtttccgtcaa 416 Query: 376 ccggacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgcccc 435 || ||||||||||| || ||||||||||||||||| ||||||||||||| ||||| || Sbjct: 417 cctgacatgcaccatggaatggaggttcgccttggtttgtccaagggacctatctgtcct 476 Query: 436 agtttcaattga 447 || ||||||||| Sbjct: 477 agcttcaattga 488
>gb|AY104566.1| Zea mays PCO130617 mRNA sequence Length = 1029 Score = 297 bits (150), Expect = 2e-77 Identities = 264/302 (87%) Strand = Plus / Plus Query: 146 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 205 ||||| |||||||||||| |||||||||||||||||||| || ||||| || ||||||| Sbjct: 476 aggagaccaagttctgggcggacaagaagaagttcgggacagatgccatatatggatccg 535 Query: 206 ccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaaggcccccag 265 || |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| | Sbjct: 536 ccctcaacatccgcaaggatctcgatgcccaaatcctctccaggttccaaaggccccctg 595 Query: 266 gtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttggatgattttg 325 |||| ||||| |||||| |||| ||||| |||||| ||||||||||| |||||||||||| Sbjct: 596 gtgctttgccgtcatctctgcttggatacgaggcactgacaggttccctggatgattttg 655 Query: 326 gatttgaagattaccttaacttgccccaagactctgacagcctgcgcgtaccggacatgc 385 ||||||||||||| |||||| |||| || || |||||||| | || ||| ||||||| Sbjct: 656 gatttgaagattatcttaacatgcctcatgattctgacagtttccgtcaacctgacatgc 715 Query: 386 accacgggatggaggttcgccttggcctgtccaagggacccatctgccccagtttcaatt 445 |||| || ||||||||||||||||| ||||||||||||| ||||| || || ||||||| Sbjct: 716 accatggaatggaggttcgccttggtttgtccaagggacctatctgtcctagcttcaatt 775 Query: 446 ga 447 || Sbjct: 776 ga 777
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Minus Query: 245 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 304 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 34172967 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 34172908 Query: 305 caggttccttggatgattttggatttgaagattaccttaact 346 | |||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 34172907 ctggttccttagatgattttgggtttgaagattatcttaact 34172866 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Minus Query: 245 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 304 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 34143250 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 34143191 Query: 305 caggttccttggatgattttggatttgaagattaccttaact 346 | |||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 34143190 ctggttccttagatgattttgggtttgaagattatcttaact 34143149 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Minus Query: 245 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 304 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 34118698 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 34118639 Query: 305 caggttccttggatgattttggatttgaagattaccttaact 346 | |||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 34118638 ctggttccttagatgattttgggtttgaagattatcttaact 34118597 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Minus Query: 245 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 304 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 34095511 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 34095452 Query: 305 caggttccttggatgattttggatttgaagattaccttaact 346 | |||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 34095451 ctggttccttagatgattttgggtttgaagattatcttaact 34095410 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 146 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 205 ||||| |||||||||||| |||||||||| |||||| | || |||||||||||||||| Sbjct: 34173821 aggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccg 34173762 Query: 206 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 247 |||||||||||||||||||||| || ||||| |||||||||| Sbjct: 34173761 ccttcaacatccgcaaggatcttgatgcccaaatcctctcca 34173720 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 146 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 205 ||||| |||||||||||| |||||||||| |||||| | || |||||||||||||||| Sbjct: 34144104 aggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccg 34144045 Query: 206 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 247 |||||||||||||||||||||| || ||||| |||||||||| Sbjct: 34144044 ccttcaacatccgcaaggatcttgatgcccaaatcctctcca 34144003 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 146 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 205 ||||| |||||||||||| |||||||||| |||||| | || |||||||||||||||| Sbjct: 34119552 aggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccg 34119493 Query: 206 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 247 |||||||||||||||||||||| || ||||| |||||||||| Sbjct: 34119492 ccttcaacatccgcaaggatcttgatgcccaaatcctctcca 34119451 Score = 111 bits (56), Expect = 3e-21 Identities = 86/96 (89%) Strand = Plus / Minus Query: 152 ccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccgccttca 211 |||||||||||| |||||||||| |||||| | || |||||||||||||||||||||| Sbjct: 34096372 ccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccgccttca 34096313 Query: 212 acatccgcaaggatctcgacgcccagatcctctcca 247 |||||||||||||||| || ||||| |||||||||| Sbjct: 34096312 acatccgcaaggatcttgatgcccaaatcctctcca 34096277 Score = 107 bits (54), Expect = 4e-20 Identities = 113/132 (85%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 17 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 76 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| |||| Sbjct: 34096586 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcctcc 34096530 Query: 77 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 136 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 34096529 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 34096470 Query: 137 ccatccacaagg 148 | ||||||||| Sbjct: 34096469 gcgtccacaagg 34096458 Score = 99.6 bits (50), Expect = 1e-17 Identities = 112/132 (84%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 17 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 76 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 34174042 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 34173986 Query: 77 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 136 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 34173985 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 34173926 Query: 137 ccatccacaagg 148 | ||||||||| Sbjct: 34173925 gcgtccacaagg 34173914 Score = 99.6 bits (50), Expect = 1e-17 Identities = 112/132 (84%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 17 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 76 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 34144325 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 34144269 Query: 77 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 136 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 34144268 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 34144209 Query: 137 ccatccacaagg 148 | ||||||||| Sbjct: 34144208 gcgtccacaagg 34144197 Score = 99.6 bits (50), Expect = 1e-17 Identities = 112/132 (84%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 17 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 76 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 34119776 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 34119720 Query: 77 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 136 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 34119719 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 34119660 Query: 137 ccatccacaagg 148 | ||||||||| Sbjct: 34119659 gcgtccacaagg 34119648 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 379 gacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagt 438 |||||||||||||| |||||||||||||| || |||| |||||||| | ||||| ||| Sbjct: 34094685 gacatgcaccacggaatggaggttcgcctcggtttgtcaaagggacctgtttgccctagt 34094626 Query: 439 ttcaattgatt 449 ||||||||||| Sbjct: 34094625 ttcaattgatt 34094615 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 cctcgcgccggcgcaccccgt 128 ||||||||||||||||||||| Sbjct: 33056861 cctcgcgccggcgcaccccgt 33056841 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 acaagaagaagttcgggacc 186 |||||||||||||||||||| Sbjct: 27264307 acaagaagaagttcgggacc 27264326
>dbj|AP007227.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0032L17 Length = 165808 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Minus Query: 245 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 304 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 100481 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 100422 Query: 305 caggttccttggatgattttggatttgaagattaccttaact 346 | |||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 100421 ctggttccttagatgattttgggtttgaagattatcttaact 100380 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Minus Query: 245 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 304 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 70764 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 70705 Query: 305 caggttccttggatgattttggatttgaagattaccttaact 346 | |||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 70704 ctggttccttagatgattttgggtttgaagattatcttaact 70663 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Minus Query: 245 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 304 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 46212 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 46153 Query: 305 caggttccttggatgattttggatttgaagattaccttaact 346 | |||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 46152 ctggttccttagatgattttgggtttgaagattatcttaact 46111 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Minus Query: 245 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 304 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 23025 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 22966 Query: 305 caggttccttggatgattttggatttgaagattaccttaact 346 | |||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 22965 ctggttccttagatgattttgggtttgaagattatcttaact 22924 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 146 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 205 ||||| |||||||||||| |||||||||| |||||| | || |||||||||||||||| Sbjct: 101335 aggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccg 101276 Query: 206 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 247 |||||||||||||||||||||| || ||||| |||||||||| Sbjct: 101275 ccttcaacatccgcaaggatcttgatgcccaaatcctctcca 101234 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 146 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 205 ||||| |||||||||||| |||||||||| |||||| | || |||||||||||||||| Sbjct: 71618 aggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccg 71559 Query: 206 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 247 |||||||||||||||||||||| || ||||| |||||||||| Sbjct: 71558 ccttcaacatccgcaaggatcttgatgcccaaatcctctcca 71517 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 146 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 205 ||||| |||||||||||| |||||||||| |||||| | || |||||||||||||||| Sbjct: 47066 aggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccg 47007 Query: 206 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 247 |||||||||||||||||||||| || ||||| |||||||||| Sbjct: 47006 ccttcaacatccgcaaggatcttgatgcccaaatcctctcca 46965 Score = 111 bits (56), Expect = 3e-21 Identities = 86/96 (89%) Strand = Plus / Minus Query: 152 ccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccgccttca 211 |||||||||||| |||||||||| |||||| | || |||||||||||||||||||||| Sbjct: 23886 ccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccgccttca 23827 Query: 212 acatccgcaaggatctcgacgcccagatcctctcca 247 |||||||||||||||| || ||||| |||||||||| Sbjct: 23826 acatccgcaaggatcttgatgcccaaatcctctcca 23791 Score = 107 bits (54), Expect = 4e-20 Identities = 113/132 (85%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 17 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 76 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| |||| Sbjct: 24100 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcctcc 24044 Query: 77 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 136 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 24043 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 23984 Query: 137 ccatccacaagg 148 | ||||||||| Sbjct: 23983 gcgtccacaagg 23972 Score = 99.6 bits (50), Expect = 1e-17 Identities = 112/132 (84%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 17 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 76 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 101556 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 101500 Query: 77 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 136 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 101499 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 101440 Query: 137 ccatccacaagg 148 | ||||||||| Sbjct: 101439 gcgtccacaagg 101428 Score = 99.6 bits (50), Expect = 1e-17 Identities = 112/132 (84%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 17 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 76 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 71839 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 71783 Query: 77 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 136 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 71782 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 71723 Query: 137 ccatccacaagg 148 | ||||||||| Sbjct: 71722 gcgtccacaagg 71711 Score = 99.6 bits (50), Expect = 1e-17 Identities = 112/132 (84%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 17 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 76 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 47290 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 47234 Query: 77 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 136 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 47233 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 47174 Query: 137 ccatccacaagg 148 | ||||||||| Sbjct: 47173 gcgtccacaagg 47162 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 379 gacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagt 438 |||||||||||||| |||||||||||||| || |||| |||||||| | ||||| ||| Sbjct: 22199 gacatgcaccacggaatggaggttcgcctcggtttgtcaaagggacctgtttgccctagt 22140 Query: 439 ttcaattgatt 449 ||||||||||| Sbjct: 22139 ttcaattgatt 22129
>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689B12 Length = 154745 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Minus Query: 245 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 304 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 8240 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 8181 Query: 305 caggttccttggatgattttggatttgaagattaccttaact 346 | |||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 8180 ctggttccttagatgattttgggtttgaagattatcttaact 8139 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 146 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 205 ||||| |||||||||||| |||||||||| |||||| | || |||||||||||||||| Sbjct: 9094 aggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccg 9035 Query: 206 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 247 |||||||||||||||||||||| || ||||| |||||||||| Sbjct: 9034 ccttcaacatccgcaaggatcttgatgcccaaatcctctcca 8993 Score = 99.6 bits (50), Expect = 1e-17 Identities = 112/132 (84%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 17 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 76 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 9315 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 9259 Query: 77 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 136 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 9258 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 9199 Query: 137 ccatccacaagg 148 | ||||||||| Sbjct: 9198 gcgtccacaagg 9187
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 246 caggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgac 305 |||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 21300225 caggttccaaaggccccctggtgcattgccatcatctatgctaggatacgaggcgctgac 21300284 Query: 306 aggttccttggatgattttggatttgaagatta 338 ||||||||||||||||| || ||||||||||| Sbjct: 21300285 tggttccttggatgatttcgggtttgaagatta 21300317 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 146 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 205 ||||| |||||||||||| || ||||||| ||||||| | || |||||||||||||||| Sbjct: 21298348 aggaggccaagttctgggcggataagaagaggttcggggcggaagccatctacggatccg 21298407 Query: 206 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 247 | ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 21298408 ctttcaacatccgcaaggatctcgatgcccaaatcctctcca 21298449 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 42 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 101 |||||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||| Sbjct: 21298153 gaagaaggaggtcggcgagaaccacgacgtgctcctcttcggcgtcaacaacagcgtcaa 21298212 Query: 102 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaagg 148 ||||||||||||||| |||||| |||||||| || ||||||||| Sbjct: 21298213 gggcgacctcgcgccgcagcacccgatccaggccaccgtccacaagg 21298259 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 379 gacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagt 438 |||||||||||||| ||||||||||||||||| |||| |||||||| || ||||| ||| Sbjct: 21301019 gacatgcaccacggaatggaggttcgccttggtttgtcaaagggaccgatttgccctagt 21301078 Query: 439 ttcaattgatt 449 ||||||||||| Sbjct: 21301079 ttcaattgatt 21301089 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 agctcagcagcggcgatggc 23 |||||||||||||||||||| Sbjct: 1388336 agctcagcagcggcgatggc 1388355
>gb|AC133333.5| Oryza sativa chromosome 3 BAC OJ1785_A05 genomic sequence, complete sequence Length = 174910 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 246 caggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgac 305 |||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 156140 caggttccaaaggccccctggtgcattgccatcatctatgctaggatacgaggcgctgac 156199 Query: 306 aggttccttggatgattttggatttgaagatta 338 ||||||||||||||||| || ||||||||||| Sbjct: 156200 tggttccttggatgatttcgggtttgaagatta 156232 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 146 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 205 ||||| |||||||||||| || ||||||| ||||||| | || |||||||||||||||| Sbjct: 154263 aggaggccaagttctgggcggataagaagaggttcggggcggaagccatctacggatccg 154322 Query: 206 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 247 | ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 154323 ctttcaacatccgcaaggatctcgatgcccaaatcctctcca 154364 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 42 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 101 |||||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||| Sbjct: 154068 gaagaaggaggtcggcgagaaccacgacgtgctcctcttcggcgtcaacaacagcgtcaa 154127 Query: 102 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaagg 148 ||||||||||||||| |||||| |||||||| || ||||||||| Sbjct: 154128 gggcgacctcgcgccgcagcacccgatccaggccaccgtccacaagg 154174 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 379 gacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagt 438 |||||||||||||| ||||||||||||||||| |||| |||||||| || ||||| ||| Sbjct: 156934 gacatgcaccacggaatggaggttcgccttggtttgtcaaagggaccgatttgccctagt 156993 Query: 439 ttcaattgatt 449 ||||||||||| Sbjct: 156994 ttcaattgatt 157004
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 246 caggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgac 305 |||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 8584325 caggttccaaaggccccctggtgcattgccatcatctatgctaggatacgaggcgctgac 8584384 Query: 306 aggttccttggatgattttggatttgaagatta 338 ||||||||||||||||| || ||||||||||| Sbjct: 8584385 tggttccttggatgatttcgggtttgaagatta 8584417 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 146 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 205 ||||| |||||||||||| || ||||||| ||||||| | || |||||||||||||||| Sbjct: 8582450 aggaggccaagttctgggcggataagaagaggttcggggcggaagccatctacggatccg 8582509 Query: 206 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 247 | ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 8582510 ctttcaacatccgcaaggatctcgatgcccaaatcctctcca 8582551 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 42 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 101 |||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||| Sbjct: 8582255 gaagaaggaggtcggcgagaaccacgacgtgctccgcttcggcttcaacaacagcgtcaa 8582314 Query: 102 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaagg 148 ||||||||||||||| |||||| |||||||| || ||||||||| Sbjct: 8582315 gggcgacctcgcgccgcagcacccgatccaggccaccgtccacaagg 8582361 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 379 gacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagt 438 |||||||||||||| |||||||||| |||||| |||| |||||||| || ||||| ||| Sbjct: 8585121 gacatgcaccacggaatggaggttctccttggtttgtcaaagggaccgatttgccctagt 8585180 Query: 439 ttcaattgatt 449 ||||||||||| Sbjct: 8585181 ttcaattgatt 8585191 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 cctcgcgccggcgcaccccgt 128 ||||||||||||||||||||| Sbjct: 15959863 cctcgcgccggcgcaccccgt 15959883 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 cgtccgcggcgacctcgcgccggc 119 |||| ||||||||||||||||||| Sbjct: 20337936 cgtcggcggcgacctcgcgccggc 20337913
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 246 caggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgac 305 |||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 21293254 caggttccaaaggccccctggtgcattgccatcatctatgctaggatacgaggcgctgac 21293313 Query: 306 aggttccttggatgattttggatttgaagatta 338 ||||||||||||||||| || ||||||||||| Sbjct: 21293314 tggttccttggatgatttcgggtttgaagatta 21293346 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 146 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 205 ||||| |||||||||||| || ||||||| ||||||| | || |||||||||||||||| Sbjct: 21291377 aggaggccaagttctgggcggataagaagaggttcggggcggaagccatctacggatccg 21291436 Query: 206 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 247 | ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 21291437 ctttcaacatccgcaaggatctcgatgcccaaatcctctcca 21291478 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 42 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 101 |||||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||| Sbjct: 21291182 gaagaaggaggtcggcgagaaccacgacgtgctcctcttcggcgtcaacaacagcgtcaa 21291241 Query: 102 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaagg 148 ||||||||||||||| |||||| |||||||| || ||||||||| Sbjct: 21291242 gggcgacctcgcgccgcagcacccgatccaggccaccgtccacaagg 21291288 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 379 gacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagt 438 |||||||||||||| ||||||||||||||||| |||| |||||||| || ||||| ||| Sbjct: 21294048 gacatgcaccacggaatggaggttcgccttggtttgtcaaagggaccgatttgccctagt 21294107 Query: 439 ttcaattgatt 449 ||||||||||| Sbjct: 21294108 ttcaattgatt 21294118 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 agctcagcagcggcgatggc 23 |||||||||||||||||||| Sbjct: 1388334 agctcagcagcggcgatggc 1388353
>dbj|AP005782.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0079G12 Length = 139796 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 246 caggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgac 305 |||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 105535 caggttccaaaggccccctggtgcattgccatcatctatgctaggatacgaggcgctgac 105594 Query: 306 aggttccttggatgattttggatttgaagatta 338 ||||||||||||||||| || ||||||||||| Sbjct: 105595 tggttccttggatgatttcgggtttgaagatta 105627 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 146 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 205 ||||| |||||||||||| || ||||||| ||||||| | || |||||||||||||||| Sbjct: 103660 aggaggccaagttctgggcggataagaagaggttcggggcggaagccatctacggatccg 103719 Query: 206 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 247 | ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 103720 ctttcaacatccgcaaggatctcgatgcccaaatcctctcca 103761 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 42 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 101 |||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||| Sbjct: 103465 gaagaaggaggtcggcgagaaccacgacgtgctccgcttcggcttcaacaacagcgtcaa 103524 Query: 102 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaagg 148 ||||||||||||||| |||||| |||||||| || ||||||||| Sbjct: 103525 gggcgacctcgcgccgcagcacccgatccaggccaccgtccacaagg 103571 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 379 gacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagt 438 |||||||||||||| |||||||||| |||||| |||| |||||||| || ||||| ||| Sbjct: 106331 gacatgcaccacggaatggaggttctccttggtttgtcaaagggaccgatttgccctagt 106390 Query: 439 ttcaattgatt 449 ||||||||||| Sbjct: 106391 ttcaattgatt 106401
>dbj|AP005802.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0057D11 Length = 190790 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 246 caggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgac 305 |||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 14121 caggttccaaaggccccctggtgcattgccatcatctatgctaggatacgaggcgctgac 14180 Query: 306 aggttccttggatgattttggatttgaagatta 338 ||||||||||||||||| || ||||||||||| Sbjct: 14181 tggttccttggatgatttcgggtttgaagatta 14213 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 146 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 205 ||||| |||||||||||| || ||||||| ||||||| | || |||||||||||||||| Sbjct: 12246 aggaggccaagttctgggcggataagaagaggttcggggcggaagccatctacggatccg 12305 Query: 206 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 247 | ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 12306 ctttcaacatccgcaaggatctcgatgcccaaatcctctcca 12347 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 42 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 101 |||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||| Sbjct: 12051 gaagaaggaggtcggcgagaaccacgacgtgctccgcttcggcttcaacaacagcgtcaa 12110 Query: 102 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaagg 148 ||||||||||||||| |||||| |||||||| || ||||||||| Sbjct: 12111 gggcgacctcgcgccgcagcacccgatccaggccaccgtccacaagg 12157 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 379 gacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagt 438 |||||||||||||| |||||||||| |||||| |||| |||||||| || ||||| ||| Sbjct: 14917 gacatgcaccacggaatggaggttctccttggtttgtcaaagggaccgatttgccctagt 14976 Query: 439 ttcaattgatt 449 ||||||||||| Sbjct: 14977 ttcaattgatt 14987
>dbj|AK099813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099K24, full insert sequence Length = 2648 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 289 ggatatgaggcaatgacaggttccttggatgattttggatttgaagattaccttaact 346 |||||||||||| |||| |||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 4 ggatatgaggcactgactggttccttagatgattttgggtttgaagattatcttaact 61
>emb|AJ851434.1| Gallus gallus partial mRNA for hypothetical protein, clone 2l15 Length = 2918 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 316 gatgattttggatttgaagatta 338 ||||||||||||||||||||||| Sbjct: 257 gatgattttggatttgaagatta 279
>ref|NM_105394.2| Arabidopsis thaliana unknown protein AT1G67250 mRNA, complete cds Length = 677 Score = 44.1 bits (22), Expect = 0.49 Identities = 49/58 (84%) Strand = Plus / Plus Query: 385 caccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagtttca 442 |||||||||||||| ||||| |||||| | || |||||||| || | ||| ||||||| Sbjct: 449 caccacgggatggaagttcgtcttggcatctcaaagggaccgatttacccaagtttca 506
>gb|BT011933.1| Arabidopsis thaliana At1g67250 mRNA sequence Length = 423 Score = 44.1 bits (22), Expect = 0.49 Identities = 49/58 (84%) Strand = Plus / Plus Query: 385 caccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagtttca 442 |||||||||||||| ||||| |||||| | || |||||||| || | ||| ||||||| Sbjct: 361 caccacgggatggaagttcgtcttggcatctcaaagggaccgatttacccaagtttca 418
>gb|AY044313.1| Arabidopsis thaliana Unknown protein (F1N21.15) mRNA, complete cds Length = 474 Score = 44.1 bits (22), Expect = 0.49 Identities = 49/58 (84%) Strand = Plus / Plus Query: 385 caccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagtttca 442 |||||||||||||| ||||| |||||| | || |||||||| || | ||| ||||||| Sbjct: 364 caccacgggatggaagttcgtcttggcatctcaaagggaccgatttacccaagtttca 421
>gb|AC092828.16| Homo sapiens 12 BAC RP11-282K24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 127836 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 521 atggatttgtgaaacatgagaa 542 |||||||||||||||||||||| Sbjct: 101904 atggatttgtgaaacatgagaa 101925
>gb|BT003679.1| Arabidopsis thaliana At1g67250 mRNA, complete cds Length = 426 Score = 44.1 bits (22), Expect = 0.49 Identities = 49/58 (84%) Strand = Plus / Plus Query: 385 caccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagtttca 442 |||||||||||||| ||||| |||||| | || |||||||| || | ||| ||||||| Sbjct: 364 caccacgggatggaagttcgtcttggcatctcaaagggaccgatttacccaagtttca 421
>gb|AY086781.1| Arabidopsis thaliana clone 27632 mRNA, complete sequence Length = 604 Score = 44.1 bits (22), Expect = 0.49 Identities = 49/58 (84%) Strand = Plus / Plus Query: 385 caccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagtttca 442 |||||||||||||| ||||| |||||| | || |||||||| || | ||| ||||||| Sbjct: 432 caccacgggatggaagttcgtcttggcatctcgaagggaccgatttacccaagtttca 489
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 213 catccgcaaggatctcgacgcc 234 |||||||||||||||||||||| Sbjct: 5004005 catccgcaaggatctcgacgcc 5003984
>gb|AC002130.2|AC002130 Genomic sequence for Arabidopsis thaliana BAC F1N21 from chromosome I, complete sequence Length = 114738 Score = 44.1 bits (22), Expect = 0.49 Identities = 49/58 (84%) Strand = Plus / Minus Query: 385 caccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagtttca 442 |||||||||||||| ||||| |||||| | || |||||||| || | ||| ||||||| Sbjct: 26741 caccacgggatggaagttcgtcttggcatctcaaagggaccgatttacccaagtttca 26684
>dbj|AK117205.1| Arabidopsis thaliana At1g67250 mRNA for unknown protein, complete cds, clone: RAFL16-75-L12 Length = 583 Score = 44.1 bits (22), Expect = 0.49 Identities = 49/58 (84%) Strand = Plus / Plus Query: 385 caccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagtttca 442 |||||||||||||| ||||| |||||| | || |||||||| || | ||| ||||||| Sbjct: 444 caccacgggatggaagttcgtcttggcatctcaaagggaccgatttacccaagtttca 501
>ref|XM_468101.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1086 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 cctcgcgccggcgcaccccgt 128 ||||||||||||||||||||| Sbjct: 396 cctcgcgccggcgcaccccgt 416
>gb|AY020123.1| Oryza sativa microsatellite MRG2448 containing (CT)X19, genomic sequence Length = 238 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 agcggcgatggcgagcggcgg 32 ||||||||||||||||||||| Sbjct: 96 agcggcgatggcgagcggcgg 76
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 agcggcgatggcgagcggcgg 32 ||||||||||||||||||||| Sbjct: 19988942 agcggcgatggcgagcggcgg 19988962 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gcggcgatggcgagcggcgg 32 |||||||||||||||||||| Sbjct: 1690881 gcggcgatggcgagcggcgg 1690862
>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_A01 Length = 139121 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 cctcgcgccggcgcaccccgt 128 ||||||||||||||||||||| Sbjct: 102801 cctcgcgccggcgcaccccgt 102781
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 74 tccgcttcggcgtcaacgacagcgtccgcggcg 106 |||| ||||||| | |||||||||||||||||| Sbjct: 6430760 tccggttcggcgacgacgacagcgtccgcggcg 6430728 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 aagctcagcagcggcgatggcgag 26 ||||||||||||| |||||||||| Sbjct: 4546213 aagctcagcagcgccgatggcgag 4546190
>dbj|AP005565.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1238_G07 Length = 78304 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 cctcgcgccggcgcaccccgt 128 ||||||||||||||||||||| Sbjct: 30576 cctcgcgccggcgcaccccgt 30596
>dbj|AK101966.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076H08, full insert sequence Length = 997 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 agcggcgatggcgagcggcgg 32 ||||||||||||||||||||| Sbjct: 59 agcggcgatggcgagcggcgg 79
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 agcggcgatggcgagcggcgg 32 ||||||||||||||||||||| Sbjct: 19915156 agcggcgatggcgagcggcgg 19915176 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gcggcgatggcgagcggcgg 32 |||||||||||||||||||| Sbjct: 1690859 gcggcgatggcgagcggcgg 1690840
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165433 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 agcggcgatggcgagcggcgg 32 ||||||||||||||||||||| Sbjct: 38318 agcggcgatggcgagcggcgg 38298
>dbj|AP006703.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01O03, TM0588b, complete sequence Length = 45450 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 378 ggacatgcaccacgggatggaggttcgccttgg 410 ||||||||| || |||||||| ||||||||||| Sbjct: 33298 ggacatgcatcatgggatggaagttcgccttgg 33330
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 gatgattttggatttgaaga 335 |||||||||||||||||||| Sbjct: 1149743 gatgattttggatttgaaga 1149724
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 ggcgatggcgagcggcggattcat 38 ||||||||||| |||||||||||| Sbjct: 246008 ggcgatggcgatcggcggattcat 245985
>gb|AC122941.3| Mus musculus BAC clone RP23-1E3 from chromosome 8, complete sequence Length = 244220 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 atgattttggatttgaagat 336 |||||||||||||||||||| Sbjct: 201798 atgattttggatttgaagat 201817
>gb|AC136149.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0060B06, complete sequence Length = 162568 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ctcagcagcggcgatggcga 25 |||||||||||||||||||| Sbjct: 152489 ctcagcagcggcgatggcga 152470
>gb|AC135362.3| Mus musculus BAC clone RP23-286J13 from chromosome 8, complete sequence Length = 173357 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 atgattttggatttgaagat 336 |||||||||||||||||||| Sbjct: 51675 atgattttggatttgaagat 51656
>gb|AC083890.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-284P20, complete sequence Length = 203967 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 tcctctccaggttccaaagg 258 |||||||||||||||||||| Sbjct: 21791 tcctctccaggttccaaagg 21772
>gb|AY223810.1| Rhodococcus erythropolis linear plasmid pBD2, complete sequence Length = 210205 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cggcgacctcgcgccggcgc 121 |||||||||||||||||||| Sbjct: 32524 cggcgacctcgcgccggcgc 32505
>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13 Length = 341957 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 ggcgatggcgagcggcggattcat 38 ||||||||||| |||||||||||| Sbjct: 245894 ggcgatggcgatcggcggattcat 245871
>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14 Length = 343050 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 ggcgatggcgagcggcggattcat 38 ||||||||||| |||||||||||| Sbjct: 246090 ggcgatggcgatcggcggattcat 246067
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cttcaacatccgcaaggatc 226 |||||||||||||||||||| Sbjct: 113795 cttcaacatccgcaaggatc 113776
>gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1293G11, from chromosome 3, complete sequence Length = 147806 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 agctcagcagcggcgatggc 23 |||||||||||||||||||| Sbjct: 49839 agctcagcagcggcgatggc 49858
>gb|AC108871.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0077M24, complete sequence Length = 128920 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ctcagcagcggcgatggcga 25 |||||||||||||||||||| Sbjct: 44703 ctcagcagcggcgatggcga 44684
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cttcaacatccgcaaggatc 226 |||||||||||||||||||| Sbjct: 28106570 cttcaacatccgcaaggatc 28106551
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ctcagcagcggcgatggcga 25 |||||||||||||||||||| Sbjct: 20609695 ctcagcagcggcgatggcga 20609676
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684A08 Length = 137841 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 acaagaagaagttcgggacc 186 |||||||||||||||||||| Sbjct: 114978 acaagaagaagttcgggacc 114997
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07 Length = 153743 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 cgtccgcggcgacctcgcgccggc 119 |||| ||||||||||||||||||| Sbjct: 117063 cgtcggcggcgacctcgcgccggc 117040
>dbj|AK119517.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-C05, full insert sequence Length = 2055 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 acaagaagaagttcgggacc 186 |||||||||||||||||||| Sbjct: 972 acaagaagaagttcgggacc 991
>dbj|AK111543.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043E12, full insert sequence Length = 1090 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 cgtccgcggcgacctcgcgccggc 119 |||| ||||||||||||||||||| Sbjct: 651 cgtcggcggcgacctcgcgccggc 628
>dbj|AK109785.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-C11, full insert sequence Length = 2041 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 ctcagcagcggcgatggcga 25 |||||||||||||||||||| Sbjct: 763 ctcagcagcggcgatggcga 782
>dbj|AK105735.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-H11, full insert sequence Length = 2291 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 agctcagcagcggcgatggc 23 |||||||||||||||||||| Sbjct: 2139 agctcagcagcggcgatggc 2158
>dbj|AK102524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096A14, full insert sequence Length = 2725 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 agctcagcagcggcgatggc 23 |||||||||||||||||||| Sbjct: 2588 agctcagcagcggcgatggc 2607
>dbj|AK100650.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111D06, full insert sequence Length = 2089 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 acaagaagaagttcgggacc 186 |||||||||||||||||||| Sbjct: 969 acaagaagaagttcgggacc 988
>dbj|AK100585.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106B08, full insert sequence Length = 2977 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 acaagaagaagttcgggacc 186 |||||||||||||||||||| Sbjct: 2030 acaagaagaagttcgggacc 2049
>dbj|AK064827.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F07, full insert sequence Length = 1984 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 acaagaagaagttcgggacc 186 |||||||||||||||||||| Sbjct: 968 acaagaagaagttcgggacc 987
>dbj|AK061743.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F02, full insert sequence Length = 1756 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 acaagaagaagttcgggacc 186 |||||||||||||||||||| Sbjct: 972 acaagaagaagttcgggacc 991
>dbj|AK061649.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C02, full insert sequence Length = 1697 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 acaagaagaagttcgggacc 186 |||||||||||||||||||| Sbjct: 595 acaagaagaagttcgggacc 614
>gb|U07366.1|CAU07366 Candida albicans translation initiation factor eIF-5A (TIF51) gene, complete cds Length = 1993 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 ttgattccacccatgtatta 463 |||||||||||||||||||| Sbjct: 1005 ttgattccacccatgtatta 986
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ccgcggcgacctcgcgccgg 118 |||||||||||||||||||| Sbjct: 358633 ccgcggcgacctcgcgccgg 358652
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ctcagcagcggcgatggcga 25 |||||||||||||||||||| Sbjct: 20919930 ctcagcagcggcgatggcga 20919911
>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104307 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gcggcgatggcgagcggcgg 32 |||||||||||||||||||| Sbjct: 76040 gcggcgatggcgagcggcgg 76059
>emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575_G05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 91883 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gcggcgatggcgagcggcgg 32 |||||||||||||||||||| Sbjct: 2045 gcggcgatggcgagcggcgg 2064 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,877,429 Number of Sequences: 3902068 Number of extensions: 3877429 Number of successful extensions: 77166 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76205 Number of HSP's gapped (non-prelim): 944 length of query: 565 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 542 effective length of database: 17,143,297,704 effective search space: 9291667355568 effective search space used: 9291667355568 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
