ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags37c02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
114KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor 126 4e-29
2CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor ... 107 2e-23
3PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein 103 2e-22
4HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly... 62 7e-10
5ZFNL3_ORYSA (Q5NAV3) Zinc finger CCCH type domain-containing pro... 30 3.6
6TRPE_BACPU (P18267) Anthranilate synthase component 1 (EC 4.1.3.... 30 4.7
7ACEA_PINTA (Q43097) Isocitrate lyase (EC 4.1.3.1) (Isocitrase) (... 29 8.1

>14KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor|
          Length = 137

 Score =  126 bits (316), Expect = 4e-29
 Identities = 57/84 (67%), Positives = 72/84 (85%)
 Frame = +1

Query: 40  RCPIDALKLGVCANVLNGLINLQLGTPPKKPCCTLIQGLADLEAAVCLCTALKANILGIN 219
           +CP DALKLGVCA+VLN + N+ +G+PP  PCC+L++GL +LEAAVCLCTA+KANILG N
Sbjct: 53  KCPRDALKLGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILGKN 112

Query: 220 LNVPIDLSLLVNYCGKNVPAGFQC 291
           LN+PI LSL++N CGK VP GF+C
Sbjct: 113 LNLPIALSLVLNNCGKQVPNGFEC 136



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>CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor (Root-specific|
           protein ZRP3)
          Length = 129

 Score =  107 bits (267), Expect = 2e-23
 Identities = 50/86 (58%), Positives = 67/86 (77%)
 Frame = +1

Query: 40  RCPIDALKLGVCANVLNGLINLQLGTPPKKPCCTLIQGLADLEAAVCLCTALKANILGIN 219
           RCPIDALKL VCA VL GL+  ++G P  + CC L++GL DL+AA+CLCTA+KAN+LGI+
Sbjct: 47  RCPIDALKLKVCAKVL-GLV--KVGLPQYEQCCPLLEGLVDLDAALCLCTAIKANVLGIH 103

Query: 220 LNVPIDLSLLVNYCGKNVPAGFQCPS 297
           LNVP+ L+ ++N CG+  P  F CP+
Sbjct: 104 LNVPLSLNFILNNCGRICPEDFTCPN 129



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>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein|
          Length = 346

 Score =  103 bits (258), Expect = 2e-22
 Identities = 45/85 (52%), Positives = 62/85 (72%)
 Frame = +1

Query: 43  CPIDALKLGVCANVLNGLINLQLGTPPKKPCCTLIQGLADLEAAVCLCTALKANILGINL 222
           CPIDALKLG C +VL GLI++ +G   K+ CC L+ GL DL+AA+CLCT ++  +L IN+
Sbjct: 261 CPIDALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGGLVDLDAAICLCTTIRLKLLNINI 320

Query: 223 NVPIDLSLLVNYCGKNVPAGFQCPS 297
            +PI L +L++ CGK  P  F+CPS
Sbjct: 321 ILPIALQVLIDDCGKYPPKDFKCPS 345



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>HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly m 1)|
          Length = 80

 Score = 62.4 bits (150), Expect = 7e-10
 Identities = 36/77 (46%), Positives = 47/77 (61%)
 Frame = +1

Query: 64  LGVCANVLNGLINLQLGTPPKKPCCTLIQGLADLEAAVCLCTALKANILGINLNVPIDLS 243
           L +C N+L G     LGT     CC LI GL D+EA VCLC  L+A  LGI LN+  +L 
Sbjct: 11  LSICLNILGG----SLGTVDD--CCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQ 61

Query: 244 LLVNYCGKNVPAGFQCP 294
           L++N CG++ P+   CP
Sbjct: 62  LILNSCGRSYPSNATCP 78



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>ZFNL3_ORYSA (Q5NAV3) Zinc finger CCCH type domain-containing protein ZFN-like 3|
          Length = 466

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -2

Query: 137 QHGFFGGVPSCRLISPLSTLAHTPSFSA 54
           QHGF    P+C+   P+ TL+++PS S+
Sbjct: 356 QHGFCKFGPTCKFDHPMGTLSYSPSASS 383



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>TRPE_BACPU (P18267) Anthranilate synthase component 1 (EC 4.1.3.27)|
           (Anthranilate synthase component I)
          Length = 513

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 18/62 (29%), Positives = 25/62 (40%)
 Frame = -2

Query: 230 GTLRLMPRMLALSAVHRHTAASRSASPWISVQHGFFGGVPSCRLISPLSTLAHTPSFSAS 51
           GTL   P++ A+  ++      R          GF G + SC  I  +S   HT S  A 
Sbjct: 404 GTLTGAPKIRAMQLLNEMEPEPRETYGGCIAYIGFDGNIDSCITIRTMSVKNHTASIQAG 463

Query: 50  IG 45
            G
Sbjct: 464 AG 465



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>ACEA_PINTA (Q43097) Isocitrate lyase (EC 4.1.3.1) (Isocitrase) (Isocitratase)|
           (ICL)
          Length = 580

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 229 PIDLSLLVNYCGKNVPAGFQCPS*NTTRQDPHP 327
           P+ +S++  Y      +G+QC S +TT  +P P
Sbjct: 90  PVQVSMMAKYLDSIYVSGWQCSSTHTTTNEPGP 122


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,332,170
Number of Sequences: 219361
Number of extensions: 818153
Number of successful extensions: 2144
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2142
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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