ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags37c02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY106116.1| Zea mays PCO091367 mRNA sequence Length = 842 Score = 254 bits (128), Expect = 2e-64 Identities = 212/240 (88%) Strand = Plus / Plus Query: 52 gacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaacctgcagctg 111 |||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| Sbjct: 326 gacgcgctgaagctgggcgtgtgcgccaacttgctgaacgggctgatcaacgcgaccctg 385 Query: 112 ggcacgccgccgaagaagccgtgctgcacgctgatccaggggctcgccgacctggaggcg 171 || |||||||| | || ||||||||||||||||||||||||||| || |||||||||||| Sbjct: 386 gggacgccgcccaggacgccgtgctgcacgctgatccaggggctggcggacctggaggcg 445 Query: 172 gcggtgtgcctgtgcacggcgctcaaggccaacatccttggcatcaacctcaacgtgccc 231 ||||||||||| ||||| | |||| ||||||| |||| ||||||||||||||| ||||| Sbjct: 446 gcggtgtgcctctgcaccgtcctcagggccaacgtcctgggcatcaacctcaacctgccc 505 Query: 232 atcgacctcagcctcctcgtcaactactgcggcaagaacgtccccgccggcttccagtgc 291 ||| |||||||||||||||||||||||||||||| | |||||| | |||||||||||| Sbjct: 506 atcaacctcagcctcctcgtcaactactgcggcaggcgcgtcccatcgggcttccagtgc 565
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 224 bits (113), Expect = 2e-55 Identities = 215/249 (86%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaac 102 |||||||||||| ||||||||||||| |||||||| |||||||| || |||||||| ||| Sbjct: 198711 tgcccgatcgacacgctgaagctgggggtgtgcgcgaacgtgctgaatgggctgataaac 198770 Query: 103 ctgcagctgggcacgccgccgaagaagccgtgctgcacgctgatccaggggctcgccgac 162 |||||||||| ||||||||| | ||||||| |||| || |||||||| ||||||||| Sbjct: 198771 gtgcagctggggacgccgccgcggcagccgtgttgcagcctcatccagggcctcgccgac 198830 Query: 163 ctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggcatcaacctc 222 || ||||| || |||||||| ||||| || ||| |||||||||||||||||||||||| Sbjct: 198831 cttgaggccgccgtgtgcctctgcaccgccctccgcgccaacatccttggcatcaacctc 198890 Query: 223 aacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtccccgccggc 282 ||| | |||||| ||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 198891 aacctccccatcaacctcagcctcctcgtcaactactgcggccgctccgtcccctccggc 198950 Query: 283 ttccagtgc 291 ||||||||| Sbjct: 198951 ttccagtgc 198959 Score = 97.6 bits (49), Expect = 3e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 90 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189692 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 189740 Score = 89.7 bits (45), Expect = 8e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 90 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 186988 gtgcccgatcgacgcgctgaagctgagcgtgtgcgccaacgtgctcaac 187036 Score = 79.8 bits (40), Expect = 8e-12 Identities = 94/112 (83%) Strand = Plus / Plus Query: 150 ggggctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatcct 209 |||||||| |||||| || || || || ||||| ||||| || ||||||||||| |||| Sbjct: 189797 ggggctcgtcgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaacgtcct 189856 Query: 210 tggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgc 261 ||||||||| ||||||| ||| |||||||| ||||||| ||||||||||| Sbjct: 189857 cggcatcaacatcaacgtccccgtcgacctcgtcctcctcctcaactactgc 189908 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||||||||||| | ||||||||||||||||| Sbjct: 33114207 cgacgcgctgaagctgcgtgtgtgcgccaacgtgct 33114172 Score = 48.1 bits (24), Expect = 0.028 Identities = 57/68 (83%) Strand = Plus / Plus Query: 194 tcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtca 253 |||||||||||||||| |||||||| |||||| | ||| |||| ||| ||||| ||| Sbjct: 187137 tcaaggccaacatcctcggcatcaatctcaacatccccgtcgatctctctctccttctca 187196 Query: 254 actactgc 261 |||||||| Sbjct: 187197 actactgc 187204 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 224 acgtgcccatcgacctcagcctcctcgtc 252 |||||||||||| ||||| |||||||||| Sbjct: 31306701 acgtgcccatcggcctcaacctcctcgtc 31306729 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ggcagcggtggcggtggcgg 23 |||||||||||||||||||| Sbjct: 23491123 ggcagcggtggcggtggcgg 23491142
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0080O10, from chromosome 3, complete sequence Length = 127917 Score = 224 bits (113), Expect = 2e-55 Identities = 215/249 (86%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaac 102 |||||||||||| ||||||||||||| |||||||| |||||||| || |||||||| ||| Sbjct: 35778 tgcccgatcgacacgctgaagctgggggtgtgcgcgaacgtgctgaatgggctgataaac 35837 Query: 103 ctgcagctgggcacgccgccgaagaagccgtgctgcacgctgatccaggggctcgccgac 162 |||||||||| ||||||||| | ||||||| |||| || |||||||| ||||||||| Sbjct: 35838 gtgcagctggggacgccgccgcggcagccgtgttgcagcctcatccagggcctcgccgac 35897 Query: 163 ctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggcatcaacctc 222 || ||||| || |||||||| ||||| || ||| |||||||||||||||||||||||| Sbjct: 35898 cttgaggccgccgtgtgcctctgcaccgccctccgcgccaacatccttggcatcaacctc 35957 Query: 223 aacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtccccgccggc 282 ||| | |||||| ||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 35958 aacctccccatcaacctcagcctcctcgtcaactactgcggccgctccgtcccctccggc 36017 Query: 283 ttccagtgc 291 ||||||||| Sbjct: 36018 ttccagtgc 36026 Score = 97.6 bits (49), Expect = 3e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 90 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26759 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 26807 Score = 89.7 bits (45), Expect = 8e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 90 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 24055 gtgcccgatcgacgcgctgaagctgagcgtgtgcgccaacgtgctcaac 24103 Score = 79.8 bits (40), Expect = 8e-12 Identities = 94/112 (83%) Strand = Plus / Plus Query: 150 ggggctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatcct 209 |||||||| |||||| || || || || ||||| ||||| || ||||||||||| |||| Sbjct: 26864 ggggctcgtcgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaacgtcct 26923 Query: 210 tggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgc 261 ||||||||| ||||||| ||| |||||||| ||||||| ||||||||||| Sbjct: 26924 cggcatcaacatcaacgtccccgtcgacctcgtcctcctcctcaactactgc 26975 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 194 tcaaggccaacatccttggcatcaacctcaac 225 |||||||||||||||| |||||||| |||||| Sbjct: 24204 tcaaggccaacatcctcggcatcaatctcaac 24235
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 224 bits (113), Expect = 2e-55 Identities = 215/249 (86%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaac 102 |||||||||||| ||||||||||||| |||||||| |||||||| || |||||||| ||| Sbjct: 132711 tgcccgatcgacacgctgaagctgggggtgtgcgcgaacgtgctgaatgggctgataaac 132770 Query: 103 ctgcagctgggcacgccgccgaagaagccgtgctgcacgctgatccaggggctcgccgac 162 |||||||||| ||||||||| | ||||||| |||| || |||||||| ||||||||| Sbjct: 132771 gtgcagctggggacgccgccgcggcagccgtgttgcagcctcatccagggcctcgccgac 132830 Query: 163 ctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggcatcaacctc 222 || ||||| || |||||||| ||||| || ||| |||||||||||||||||||||||| Sbjct: 132831 cttgaggccgccgtgtgcctctgcaccgccctccgcgccaacatccttggcatcaacctc 132890 Query: 223 aacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtccccgccggc 282 ||| | |||||| ||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 132891 aacctccccatcaacctcagcctcctcgtcaactactgcggccgctccgtcccctccggc 132950 Query: 283 ttccagtgc 291 ||||||||| Sbjct: 132951 ttccagtgc 132959 Score = 97.6 bits (49), Expect = 3e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 90 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123692 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 123740 Score = 89.7 bits (45), Expect = 8e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 90 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 120988 gtgcccgatcgacgcgctgaagctgagcgtgtgcgccaacgtgctcaac 121036 Score = 79.8 bits (40), Expect = 8e-12 Identities = 94/112 (83%) Strand = Plus / Plus Query: 150 ggggctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatcct 209 |||||||| |||||| || || || || ||||| ||||| || ||||||||||| |||| Sbjct: 123797 ggggctcgtcgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaacgtcct 123856 Query: 210 tggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgc 261 ||||||||| ||||||| ||| |||||||| ||||||| ||||||||||| Sbjct: 123857 cggcatcaacatcaacgtccccgtcgacctcgtcctcctcctcaactactgc 123908 Score = 48.1 bits (24), Expect = 0.028 Identities = 57/68 (83%) Strand = Plus / Plus Query: 194 tcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtca 253 |||||||||||||||| |||||||| |||||| | ||| |||| ||| ||||| ||| Sbjct: 121137 tcaaggccaacatcctcggcatcaatctcaacatccccgtcgatctctctctccttctca 121196 Query: 254 actactgc 261 |||||||| Sbjct: 121197 actactgc 121204
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 224 bits (113), Expect = 2e-55 Identities = 215/249 (86%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaac 102 |||||||||||| ||||||||||||| |||||||| |||||||| || |||||||| ||| Sbjct: 198711 tgcccgatcgacacgctgaagctgggggtgtgcgcgaacgtgctgaatgggctgataaac 198770 Query: 103 ctgcagctgggcacgccgccgaagaagccgtgctgcacgctgatccaggggctcgccgac 162 |||||||||| ||||||||| | ||||||| |||| || |||||||| ||||||||| Sbjct: 198771 gtgcagctggggacgccgccgcggcagccgtgttgcagcctcatccagggcctcgccgac 198830 Query: 163 ctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggcatcaacctc 222 || ||||| || |||||||| ||||| || ||| |||||||||||||||||||||||| Sbjct: 198831 cttgaggccgccgtgtgcctctgcaccgccctccgcgccaacatccttggcatcaacctc 198890 Query: 223 aacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtccccgccggc 282 ||| | |||||| ||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 198891 aacctccccatcaacctcagcctcctcgtcaactactgcggccgctccgtcccctccggc 198950 Query: 283 ttccagtgc 291 ||||||||| Sbjct: 198951 ttccagtgc 198959 Score = 97.6 bits (49), Expect = 3e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 90 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189692 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 189740 Score = 89.7 bits (45), Expect = 8e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 90 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 186988 gtgcccgatcgacgcgctgaagctgagcgtgtgcgccaacgtgctcaac 187036 Score = 79.8 bits (40), Expect = 8e-12 Identities = 94/112 (83%) Strand = Plus / Plus Query: 150 ggggctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatcct 209 |||||||| |||||| || || || || ||||| ||||| || ||||||||||| |||| Sbjct: 189797 ggggctcgtcgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaacgtcct 189856 Query: 210 tggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgc 261 ||||||||| ||||||| ||| |||||||| ||||||| ||||||||||| Sbjct: 189857 cggcatcaacatcaacgtccccgtcgacctcgtcctcctcctcaactactgc 189908 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||||||||||| | ||||||||||||||||| Sbjct: 33204717 cgacgcgctgaagctgcgtgtgtgcgccaacgtgct 33204682 Score = 48.1 bits (24), Expect = 0.028 Identities = 57/68 (83%) Strand = Plus / Plus Query: 194 tcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtca 253 |||||||||||||||| |||||||| |||||| | ||| |||| ||| ||||| ||| Sbjct: 187137 tcaaggccaacatcctcggcatcaatctcaacatccccgtcgatctctctctccttctca 187196 Query: 254 actactgc 261 |||||||| Sbjct: 187197 actactgc 187204 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 224 acgtgcccatcgacctcagcctcctcgtc 252 |||||||||||| ||||| |||||||||| Sbjct: 31397217 acgtgcccatcggcctcaacctcctcgtc 31397245 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ggcagcggtggcggtggcgg 23 |||||||||||||||||||| Sbjct: 23484151 ggcagcggtggcggtggcgg 23484170
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 224 bits (113), Expect = 2e-55 Identities = 215/249 (86%) Strand = Plus / Minus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaac 102 |||||||||||| ||||||||||||| |||||||| |||||||| || |||||||| ||| Sbjct: 63945 tgcccgatcgacacgctgaagctgggggtgtgcgcgaacgtgctgaatgggctgataaac 63886 Query: 103 ctgcagctgggcacgccgccgaagaagccgtgctgcacgctgatccaggggctcgccgac 162 |||||||||| ||||||||| | ||||||| |||| || |||||||| ||||||||| Sbjct: 63885 gtgcagctggggacgccgccgcggcagccgtgttgcagcctcatccagggcctcgccgac 63826 Query: 163 ctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggcatcaacctc 222 || ||||| || |||||||| ||||| || ||| |||||||||||||||||||||||| Sbjct: 63825 cttgaggccgccgtgtgcctctgcaccgccctccgcgccaacatccttggcatcaacctc 63766 Query: 223 aacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtccccgccggc 282 ||| | |||||| ||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 63765 aacctccccatcaacctcagcctcctcgtcaactactgcggccgctccgtcccctccggc 63706 Query: 283 ttccagtgc 291 ||||||||| Sbjct: 63705 ttccagtgc 63697 Score = 97.6 bits (49), Expect = 3e-17 Identities = 49/49 (100%) Strand = Plus / Minus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 90 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72962 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 72914 Score = 89.7 bits (45), Expect = 8e-15 Identities = 48/49 (97%) Strand = Plus / Minus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 90 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 75666 gtgcccgatcgacgcgctgaagctgagcgtgtgcgccaacgtgctcaac 75618 Score = 79.8 bits (40), Expect = 8e-12 Identities = 94/112 (83%) Strand = Plus / Minus Query: 150 ggggctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatcct 209 |||||||| |||||| || || || || ||||| ||||| || ||||||||||| |||| Sbjct: 72857 ggggctcgtcgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaacgtcct 72798 Query: 210 tggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgc 261 ||||||||| ||||||| ||| |||||||| ||||||| ||||||||||| Sbjct: 72797 cggcatcaacatcaacgtccccgtcgacctcgtcctcctcctcaactactgc 72746 Score = 48.1 bits (24), Expect = 0.028 Identities = 57/68 (83%) Strand = Plus / Minus Query: 194 tcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtca 253 |||||||||||||||| |||||||| |||||| | ||| |||| ||| ||||| ||| Sbjct: 75517 tcaaggccaacatcctcggcatcaatctcaacatccccgtcgatctctctctccttctca 75458 Query: 254 actactgc 261 |||||||| Sbjct: 75457 actactgc 75450
>ref|XM_467170.1| Oryza sativa (japonica cultivar-group), mRNA Length = 833 Score = 167 bits (84), Expect = 4e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| |||| Sbjct: 335 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcctctgca 394 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 |||| ||| || ||||||||| || |||||||||||| | |||||||||||||||||| Sbjct: 395 cggccatcaggggcaacatcctcggaatcaacctcaacctccccatcgacctcagcctca 454 Query: 248 tcgtcaactactgcggcaagaacgtccccgccggcttccagtgc 291 || |||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 455 tcctcaactactgcggcaagaccgtccccaccggcttcaagtgc 498 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||||||||||||||||||||||||||||||| Sbjct: 261 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 296
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 167 bits (84), Expect = 4e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| |||| Sbjct: 26823815 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcctctgca 26823874 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 |||| ||| || ||||||||| || |||||||||||| | |||||||||||||||||| Sbjct: 26823875 cggccatcaggggcaacatcctcggaatcaacctcaacctccccatcgacctcagcctca 26823934 Query: 248 tcgtcaactactgcggcaagaacgtccccgccggcttccagtgc 291 || |||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 26823935 tcctcaactactgcggcaagaccgtccccaccggcttcaagtgc 26823978 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 154 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggc 213 ||||||||||| ||||| || || || || ||||| || ||||||||||| | || ||| Sbjct: 26833456 ctcgccgaccttgaggccgccgtctgtctctgcaccgccatcaaggccaacgtgctcggc 26833515 Query: 214 atcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtc 273 |||| |||| || | ||| || | |||||||||||||||||||||||||||||||||||| Sbjct: 26833516 atcaccctcgacatccccgtcaagctcagcctcctcgtcaactactgcggcaagaacgtc 26833575 Query: 274 cc 275 || Sbjct: 26833576 cc 26833577 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||||||||||||||||||||||||||||||| Sbjct: 26823741 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 26823776
>dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1001_D02 Length = 129081 Score = 167 bits (84), Expect = 4e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| |||| Sbjct: 2358 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcctctgca 2417 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 |||| ||| || ||||||||| || |||||||||||| | |||||||||||||||||| Sbjct: 2418 cggccatcaggggcaacatcctcggaatcaacctcaacctccccatcgacctcagcctca 2477 Query: 248 tcgtcaactactgcggcaagaacgtccccgccggcttccagtgc 291 || |||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 2478 tcctcaactactgcggcaagaccgtccccaccggcttcaagtgc 2521 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 154 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggc 213 ||||||||||| ||||| || || || || ||||| || ||||||||||| | || ||| Sbjct: 11999 ctcgccgaccttgaggccgccgtctgtctctgcaccgccatcaaggccaacgtgctcggc 12058 Query: 214 atcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtc 273 |||| |||| || | ||| || | |||||||||||||||||||||||||||||||||||| Sbjct: 12059 atcaccctcgacatccccgtcaagctcagcctcctcgtcaactactgcggcaagaacgtc 12118 Query: 274 cc 275 || Sbjct: 12119 cc 12120 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||||||||||||||||||||||||||||||| Sbjct: 2284 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 2319
>dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516F12 Length = 146364 Score = 167 bits (84), Expect = 4e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| |||| Sbjct: 89868 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcctctgca 89927 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 |||| ||| || ||||||||| || |||||||||||| | |||||||||||||||||| Sbjct: 89928 cggccatcaggggcaacatcctcggaatcaacctcaacctccccatcgacctcagcctca 89987 Query: 248 tcgtcaactactgcggcaagaacgtccccgccggcttccagtgc 291 || |||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 89988 tcctcaactactgcggcaagaccgtccccaccggcttcaagtgc 90031 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 154 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggc 213 ||||||||||| ||||| || || || || ||||| || ||||||||||| | || ||| Sbjct: 99509 ctcgccgaccttgaggccgccgtctgtctctgcaccgccatcaaggccaacgtgctcggc 99568 Query: 214 atcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtc 273 |||| |||| || | ||| || | |||||||||||||||||||||||||||||||||||| Sbjct: 99569 atcaccctcgacatccccgtcaagctcagcctcctcgtcaactactgcggcaagaacgtc 99628 Query: 274 cc 275 || Sbjct: 99629 cc 99630 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||||||||||||||||||||||||||||||| Sbjct: 89794 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 89829
>dbj|AK109149.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-F07, full insert sequence Length = 833 Score = 167 bits (84), Expect = 4e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| |||| Sbjct: 335 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcctctgca 394 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 |||| ||| || ||||||||| || |||||||||||| | |||||||||||||||||| Sbjct: 395 cggccatcaggggcaacatcctcggaatcaacctcaacctccccatcgacctcagcctca 454 Query: 248 tcgtcaactactgcggcaagaacgtccccgccggcttccagtgc 291 || |||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 455 tcctcaactactgcggcaagaccgtccccaccggcttcaagtgc 498 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||||||||||||||||||||||||||||||| Sbjct: 261 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 296
>gb|L27208.1|RICRCC3 Oryza sativa root-specific RCc3 mRNA, complete cds Length = 715 Score = 167 bits (84), Expect = 4e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| |||| Sbjct: 260 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcctctgca 319 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 |||| ||| || ||||||||| || |||||||||||| | |||||||||||||||||| Sbjct: 320 cggccatcaggggcaacatcctcggaatcaacctcaacctccccatcgacctcagcctca 379 Query: 248 tcgtcaactactgcggcaagaacgtccccgccggcttccagtgc 291 || |||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 380 tcctcaactactgcggcaagaccgtccccaccggcttcaagtgc 423 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||||||||||||||||||||||||||||||| Sbjct: 186 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 221
>ref|XM_473449.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 396 Score = 143 bits (72), Expect = 6e-31 Identities = 141/164 (85%) Strand = Plus / Plus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| |||| Sbjct: 227 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcctctgca 286 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 |||| |||||| |||||| || ||||||||||| ||| | ||| |||||||||||||| Sbjct: 287 cggccatcaagggcaacattctcggcatcaaccttaacctccccgtcgacctcagcctca 346 Query: 248 tcgtcaactactgcggcaagaacgtccccgccggcttccagtgc 291 || ||||||||||||||||| ||| ||| |||||||| ||||| Sbjct: 347 tcctcaactactgcggcaagcgcgtgcccaccggcttcaagtgc 390 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||||||||||||||||||||||||||||||| Sbjct: 153 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 188
>emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010H02, complete sequence Length = 173522 Score = 143 bits (72), Expect = 6e-31 Identities = 141/164 (85%) Strand = Plus / Plus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| |||| Sbjct: 147474 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcctctgca 147533 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 |||| |||||| |||||| || ||||||||||| ||| | ||| |||||||||||||| Sbjct: 147534 cggccatcaagggcaacattctcggcatcaaccttaacctccccgtcgacctcagcctca 147593 Query: 248 tcgtcaactactgcggcaagaacgtccccgccggcttccagtgc 291 || ||||||||||||||||| ||| ||| |||||||| ||||| Sbjct: 147594 tcctcaactactgcggcaagcgcgtgcccaccggcttcaagtgc 147637 Score = 131 bits (66), Expect = 2e-27 Identities = 135/158 (85%) Strand = Plus / Plus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 ||||||||||| ||||| | ||||||||| |||||| ||||||||||| ||||| |||| Sbjct: 144274 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtatgcctctgca 144333 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 |||| ||| | ||||||||| ||||||||||||||| | ||| |||||||||||||| Sbjct: 144334 cggccatcagaggcaacatcctcggcatcaacctcaacctccccgtcgacctcagcctca 144393 Query: 248 tcgtcaactactgcggcaagaacgtccccgccggcttc 285 || ||||||||||||||||| ||| ||| |||||||| Sbjct: 144394 tcctcaactactgcggcaagcgcgtgcccaccggcttc 144431 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||||||||||||||||||||||||||||||| Sbjct: 147400 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 147435 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||||||||||||||||||||||||||||||| Sbjct: 144200 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 144235 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Plus Query: 154 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaac 204 ||||||||||| ||||| || || ||||| |||||||| ||||||||||| Sbjct: 157632 ctcgccgacctcgaggccgccgtctgcctctgcacggccatcaaggccaac 157682 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 ggaggcagcggtggcggtggcgg 23 ||||||||||||||||||||||| Sbjct: 128630 ggaggcagcggtggcggtggcgg 128608 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 241 agcctcctcgtcaactactgcggcaagaacgtcccc 276 |||||||| ||||||||||| |||||| ||||||| Sbjct: 157719 agcctccttgtcaactactgtggcaagtgcgtcccc 157754
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 143 bits (72), Expect = 6e-31 Identities = 141/164 (85%) Strand = Plus / Plus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| |||| Sbjct: 27716848 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcctctgca 27716907 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 |||| |||||| |||||| || ||||||||||| ||| | ||| |||||||||||||| Sbjct: 27716908 cggccatcaagggcaacattctcggcatcaaccttaacctccccgtcgacctcagcctca 27716967 Query: 248 tcgtcaactactgcggcaagaacgtccccgccggcttccagtgc 291 || ||||||||||||||||| ||| ||| |||||||| ||||| Sbjct: 27716968 tcctcaactactgcggcaagcgcgtgcccaccggcttcaagtgc 27717011 Score = 131 bits (66), Expect = 2e-27 Identities = 135/158 (85%) Strand = Plus / Plus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 ||||||||||| ||||| | ||||||||| |||||| ||||||||||| ||||| |||| Sbjct: 27713648 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtatgcctctgca 27713707 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 |||| ||| | ||||||||| ||||||||||||||| | ||| |||||||||||||| Sbjct: 27713708 cggccatcagaggcaacatcctcggcatcaacctcaacctccccgtcgacctcagcctca 27713767 Query: 248 tcgtcaactactgcggcaagaacgtccccgccggcttc 285 || ||||||||||||||||| ||| ||| |||||||| Sbjct: 27713768 tcctcaactactgcggcaagcgcgtgcccaccggcttc 27713805 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||||||||||||||||||||||||||||||| Sbjct: 27716774 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 27716809 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||||||||||||||||||||||||||||||| Sbjct: 27713574 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 27713609 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 247 ctcgtcaactactgcggcaagaacgtccccgccggcttccagtgccc 293 ||||||||| | ||||||||| |||||||| || ||||||||||||| Sbjct: 31096062 ctcgtcaacgagtgcggcaagcacgtcccctccagcttccagtgccc 31096108 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 76 |||||| ||||||||||| ||||| |||||||||| Sbjct: 32827379 gtgccccatcgacgcgctcaagctcggcgtgtgcg 32827345 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 247 ctcgtcaactactgcggcaagaacgtccccgccggcttccagtgccc 293 |||||||| ||||||||||| |||| ||| ||| |||||||||||| Sbjct: 31085643 ctcgtcaatgactgcggcaagtacgtgccctccgacttccagtgccc 31085689 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Plus Query: 154 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaac 204 ||||||||||| ||||| || || ||||| |||||||| ||||||||||| Sbjct: 27727006 ctcgccgacctcgaggccgccgtctgcctctgcacggccatcaaggccaac 27727056 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 ggaggcagcggtggcggtggcgg 23 ||||||||||||||||||||||| Sbjct: 27698004 ggaggcagcggtggcggtggcgg 27697982 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 241 agcctcctcgtcaactactgcggcaagaacgtcccc 276 |||||||| ||||||||||| |||||| ||||||| Sbjct: 27727093 agcctccttgtcaactactgtggcaagtgcgtcccc 27727128 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 gtacgtacgtacgcgcatgc 379 |||||||||||||||||||| Sbjct: 23327002 gtacgtacgtacgcgcatgc 23327021
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 139 bits (70), Expect = 1e-29 Identities = 112/126 (88%) Strand = Plus / Minus Query: 160 gacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggcatcaac 219 |||||||||||||||||||||||||||||||| ||||||||||| | || ||||||||| Sbjct: 66959 gacctggaggcggcggtgtgcctgtgcacggccatcaaggccaacgtgctgggcatcaac 66900 Query: 220 ctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtccccgcc 279 |||||| | |||||| ||||||||||| || |||||| |||||||||| ||||||| || Sbjct: 66899 ctcaacctccccatccacctcagcctcatcctcaacttctgcggcaagggcgtccccacc 66840 Query: 280 ggcttc 285 |||||| Sbjct: 66839 ggcttc 66834 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 67074 gtgcccgacggacgcgctgaagctgggggtgtgcgcgaacgtgct 67030
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 139 bits (70), Expect = 1e-29 Identities = 112/126 (88%) Strand = Plus / Plus Query: 160 gacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggcatcaac 219 |||||||||||||||||||||||||||||||| ||||||||||| | || ||||||||| Sbjct: 21267400 gacctggaggcggcggtgtgcctgtgcacggccatcaaggccaacgtgctgggcatcaac 21267459 Query: 220 ctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtccccgcc 279 |||||| | |||||| ||||||||||| || |||||| |||||||||| ||||||| || Sbjct: 21267460 ctcaacctccccatccacctcagcctcatcctcaacttctgcggcaagggcgtccccacc 21267519 Query: 280 ggcttc 285 |||||| Sbjct: 21267520 ggcttc 21267525 Score = 83.8 bits (42), Expect = 5e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgg 92 |||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 21139421 tgcccgatcgacgcgctgaagctgcgggtgtgcgccaacgtgctcaacgg 21139372 Score = 81.8 bits (41), Expect = 2e-12 Identities = 116/141 (82%) Strand = Plus / Minus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 21178308 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 21178249 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 | || ||||||||||| | || |||||||| |||||| | |||||||||||||||||| Sbjct: 21178248 ccgccatcaaggccaacgtgctgggcatcaagctcaacctccccatcgacctcagcctca 21178189 Query: 248 tcgtcaactactgcggcaaga 268 || ||||| |||||||||||| Sbjct: 21178188 tcctcaacaactgcggcaaga 21178168 Score = 81.8 bits (41), Expect = 2e-12 Identities = 116/141 (82%) Strand = Plus / Minus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 21171594 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 21171535 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 | || ||||||||||| | || ||| ||||||||||| | |||||||||||||||||| Sbjct: 21171534 ccgccatcaaggccaacgtgctcggcctcaacctcaacatccccatcgacctcagcctca 21171475 Query: 248 tcgtcaactactgcggcaaga 268 || ||||| |||||||||||| Sbjct: 21171474 tcctcaacaactgcggcaaga 21171454 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatc 99 |||||||||||||| ||||||||| | |||||||||||| ||||||||||||||||| Sbjct: 10072477 tgcccgatcgacgccctgaagctgagggtgtgcgccaacctgctcaacgggctgatc 10072421 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 95 |||||||||||||| ||||||||| | |||||| ||||||||||||||||||| Sbjct: 21155945 tgcccgatcgacgccctgaagctgagggtgtgcaccaacgtgctcaacgggct 21155893 Score = 65.9 bits (33), Expect = 1e-07 Identities = 114/141 (80%) Strand = Plus / Minus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 21175040 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 21174981 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 | || ||||||||||| | || |||||||| ||| || | ||| |||||||||||||| Sbjct: 21174980 ccgccgtcaaggccaacgtgctcggcatcaagctcgacctccccgtcgacctcagcctca 21174921 Query: 248 tcgtcaactactgcggcaaga 268 || ||||| |||||||||||| Sbjct: 21174920 tcctcaacaactgcggcaaga 21174900 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 95 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 21151830 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 21151778 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 95 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 21148537 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 21148485 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 95 |||||||||||||| |||||||| | ||||| |||||||||||||||||||| Sbjct: 21143791 tgcccgatcgacgccttgaagctgagggtgtgtgccaacgtgctcaacgggct 21143739 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctc 87 ||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 21171680 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgctc 21171635 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 213 catcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaac 270 ||||||||||||| ||||| ||||||||||| || || ||||| | |||||||||||| Sbjct: 10072307 catcaacctcaacctgcccgtcgacctcagcatcatcctcaacaagtgcggcaagaac 10072250 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctg 96 |||||||| ||||| |||||||| | |||||||||||||||||||| |||||| Sbjct: 10063521 tgcccgatggacgctttgaagctgagagtgtgcgccaacgtgctcaaggggctg 10063468 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 21267285 gtgcccgacggacgcgctgaagctgggggtgtgcgcgaacgtgct 21267329 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 21178394 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgct 21178350 Score = 58.0 bits (29), Expect = 3e-05 Identities = 94/115 (81%), Gaps = 3/115 (2%) Strand = Plus / Minus Query: 157 gccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttgg---c 213 |||||||| || || || || ||||| ||||| || ||||||||||| | ||||| | Sbjct: 21143680 gccgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaacgttcttgggatc 21143621 Query: 214 atcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaaga 268 |||||||||||| | ||| |||| ||||||||| || ||||| |||||||||||| Sbjct: 21143620 atcaacctcaacatccccgtcgatctcagcctcatcctcaacaactgcggcaaga 21143566 Score = 56.0 bits (28), Expect = 1e-04 Identities = 100/124 (80%) Strand = Plus / Minus Query: 132 gtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgcacggc 191 ||||||| ||||| | |||||| |||||||||| || || || || ||||| ||||| || Sbjct: 21148451 gtgctgctcgctgctgcaggggatcgccgacctcgacgccgccgtctgcctctgcaccgc 21148392 Query: 192 gctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgt 251 |||||||||| | || ||||||||||||||| | ||| |||| || |||||| || | Sbjct: 21148391 cgtcaaggccaatgtgctgggcatcaacctcaacctccccgtcgatctgagcctcatcct 21148332 Query: 252 caac 255 |||| Sbjct: 21148331 caac 21148328 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 ||||||||| |||| ||||||||| | ||||||||||||||||| Sbjct: 10055832 tgcccgatcaacgccctgaagctgagagtgtgcgccaacgtgct 10055789 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 132 gtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgcacggc 191 ||||||| ||||| | |||||| |||||||||| || || || || ||||| ||||| || Sbjct: 21151744 gtgctgctcgctgctgcaggggatcgccgacctcgacgccgccgtctgcctctgcaccgc 21151685 Query: 192 gctcaaggccaacatccttggcatcaacct 221 ||||||||||| | || ||||||||||| Sbjct: 21151684 cgtcaaggccaacgtgctgggcatcaacct 21151655 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 59 tgaagctgggcgtgtgcgccaacgtgctcaacgggctg 96 |||||||| | ||||||||||||||||| ||||||||| Sbjct: 10048288 tgaagctgagagtgtgcgccaacgtgctaaacgggctg 10048251 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 ||||||| ||||||| |||||||| | ||||||||||||||||| Sbjct: 21175126 gtgcccgcgcgacgcgttgaagctgcgggtgtgcgccaacgtgct 21175082 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 ||||||| |||||||||||||||||| | ||||||| ||||||| Sbjct: 21136809 gtgcccgttcgacgcgctgaagctggcggcgtgcgccgacgtgct 21136765 Score = 44.1 bits (22), Expect = 0.43 Identities = 94/118 (79%) Strand = Plus / Minus Query: 151 gggctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatcctt 210 |||||||||||||| || || || || ||||| ||||| || ||||||||||| | || Sbjct: 21155840 gggctcgccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaacgtgctc 21155781 Query: 211 ggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaaga 268 ||||| || |||||| | || |||| || |||||| || ||||| | |||||||||| Sbjct: 21155780 ggcatgaaactcaacctcgccgtcgatctaagcctcatcctcaacaagtgcggcaaga 21155723 Score = 42.1 bits (21), Expect = 1.7 Identities = 60/73 (82%) Strand = Plus / Minus Query: 196 aaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaac 255 ||||||||| | || ||| ||||||||||||| ||| |||| |||| ||| || ||||| Sbjct: 21139271 aaggccaacgtgctcggcgtcaacctcaacgtccccgtcgagctcaagctcatcctcaac 21139212 Query: 256 tactgcggcaaga 268 | |||||||||| Sbjct: 21139211 aagtgcggcaaga 21139199 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 154 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgct 194 ||||||||| |||| || || |||||||| ||||||||||| Sbjct: 21136661 ctcgccgacgtggacgccgccgtgtgcctctgcacggcgct 21136621
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 139 bits (70), Expect = 1e-29 Identities = 112/126 (88%) Strand = Plus / Plus Query: 160 gacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggcatcaac 219 |||||||||||||||||||||||||||||||| ||||||||||| | || ||||||||| Sbjct: 21278664 gacctggaggcggcggtgtgcctgtgcacggccatcaaggccaacgtgctgggcatcaac 21278723 Query: 220 ctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtccccgcc 279 |||||| | |||||| ||||||||||| || |||||| |||||||||| ||||||| || Sbjct: 21278724 ctcaacctccccatccacctcagcctcatcctcaacttctgcggcaagggcgtccccacc 21278783 Query: 280 ggcttc 285 |||||| Sbjct: 21278784 ggcttc 21278789 Score = 83.8 bits (42), Expect = 5e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgg 92 |||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 21150685 tgcccgatcgacgcgctgaagctgcgggtgtgcgccaacgtgctcaacgg 21150636 Score = 81.8 bits (41), Expect = 2e-12 Identities = 116/141 (82%) Strand = Plus / Minus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 21189572 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 21189513 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 | || ||||||||||| | || |||||||| |||||| | |||||||||||||||||| Sbjct: 21189512 ccgccatcaaggccaacgtgctgggcatcaagctcaacctccccatcgacctcagcctca 21189453 Query: 248 tcgtcaactactgcggcaaga 268 || ||||| |||||||||||| Sbjct: 21189452 tcctcaacaactgcggcaaga 21189432 Score = 81.8 bits (41), Expect = 2e-12 Identities = 116/141 (82%) Strand = Plus / Minus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 21182858 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 21182799 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 | || ||||||||||| | || ||| ||||||||||| | |||||||||||||||||| Sbjct: 21182798 ccgccatcaaggccaacgtgctcggcctcaacctcaacatccccatcgacctcagcctca 21182739 Query: 248 tcgtcaactactgcggcaaga 268 || ||||| |||||||||||| Sbjct: 21182738 tcctcaacaactgcggcaaga 21182718 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatc 99 |||||||||||||| ||||||||| | |||||||||||| ||||||||||||||||| Sbjct: 10078516 tgcccgatcgacgccctgaagctgagggtgtgcgccaacctgctcaacgggctgatc 10078460 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 95 |||||||||||||| ||||||||| | |||||| ||||||||||||||||||| Sbjct: 21167209 tgcccgatcgacgccctgaagctgagggtgtgcaccaacgtgctcaacgggct 21167157 Score = 65.9 bits (33), Expect = 1e-07 Identities = 114/141 (80%) Strand = Plus / Minus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 21186304 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 21186245 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 | || ||||||||||| | || |||||||| ||| || | ||| |||||||||||||| Sbjct: 21186244 ccgccgtcaaggccaacgtgctcggcatcaagctcgacctccccgtcgacctcagcctca 21186185 Query: 248 tcgtcaactactgcggcaaga 268 || ||||| |||||||||||| Sbjct: 21186184 tcctcaacaactgcggcaaga 21186164 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 95 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 21163094 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 21163042 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 95 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 21159801 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 21159749 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 95 |||||||||||||| |||||||| | ||||| |||||||||||||||||||| Sbjct: 21155055 tgcccgatcgacgccttgaagctgagggtgtgtgccaacgtgctcaacgggct 21155003 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctc 87 ||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 21182944 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgctc 21182899 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 213 catcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaac 270 ||||||||||||| ||||| ||||||||||| || || ||||| | |||||||||||| Sbjct: 10078346 catcaacctcaacctgcccgtcgacctcagcatcatcctcaacaagtgcggcaagaac 10078289 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctg 96 |||||||| ||||| |||||||| | |||||||||||||||||||| |||||| Sbjct: 10069560 tgcccgatggacgctttgaagctgagagtgtgcgccaacgtgctcaaggggctg 10069507 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 21278549 gtgcccgacggacgcgctgaagctgggggtgtgcgcgaacgtgct 21278593 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 21189658 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgct 21189614 Score = 58.0 bits (29), Expect = 3e-05 Identities = 94/115 (81%), Gaps = 3/115 (2%) Strand = Plus / Minus Query: 157 gccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttgg---c 213 |||||||| || || || || ||||| ||||| || ||||||||||| | ||||| | Sbjct: 21154944 gccgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaacgttcttgggatc 21154885 Query: 214 atcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaaga 268 |||||||||||| | ||| |||| ||||||||| || ||||| |||||||||||| Sbjct: 21154884 atcaacctcaacatccccgtcgatctcagcctcatcctcaacaactgcggcaaga 21154830 Score = 56.0 bits (28), Expect = 1e-04 Identities = 100/124 (80%) Strand = Plus / Minus Query: 132 gtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgcacggc 191 ||||||| ||||| | |||||| |||||||||| || || || || ||||| ||||| || Sbjct: 21159715 gtgctgctcgctgctgcaggggatcgccgacctcgacgccgccgtctgcctctgcaccgc 21159656 Query: 192 gctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgt 251 |||||||||| | || ||||||||||||||| | ||| |||| || |||||| || | Sbjct: 21159655 cgtcaaggccaatgtgctgggcatcaacctcaacctccccgtcgatctgagcctcatcct 21159596 Query: 252 caac 255 |||| Sbjct: 21159595 caac 21159592 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 ||||||||| |||| ||||||||| | ||||||||||||||||| Sbjct: 10061871 tgcccgatcaacgccctgaagctgagagtgtgcgccaacgtgct 10061828 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 132 gtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgcacggc 191 ||||||| ||||| | |||||| |||||||||| || || || || ||||| ||||| || Sbjct: 21163008 gtgctgctcgctgctgcaggggatcgccgacctcgacgccgccgtctgcctctgcaccgc 21162949 Query: 192 gctcaaggccaacatccttggcatcaacct 221 ||||||||||| | || ||||||||||| Sbjct: 21162948 cgtcaaggccaacgtgctgggcatcaacct 21162919 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 59 tgaagctgggcgtgtgcgccaacgtgctcaacgggctg 96 |||||||| | ||||||||||||||||| ||||||||| Sbjct: 10054327 tgaagctgagagtgtgcgccaacgtgctaaacgggctg 10054290 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 ||||||| ||||||| |||||||| | ||||||||||||||||| Sbjct: 21186390 gtgcccgcgcgacgcgttgaagctgcgggtgtgcgccaacgtgct 21186346 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 ||||||| |||||||||||||||||| | ||||||| ||||||| Sbjct: 21148073 gtgcccgttcgacgcgctgaagctggcggcgtgcgccgacgtgct 21148029 Score = 44.1 bits (22), Expect = 0.43 Identities = 94/118 (79%) Strand = Plus / Minus Query: 151 gggctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatcctt 210 |||||||||||||| || || || || ||||| ||||| || ||||||||||| | || Sbjct: 21167104 gggctcgccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaacgtgctc 21167045 Query: 211 ggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaaga 268 ||||| || |||||| | || |||| || |||||| || ||||| | |||||||||| Sbjct: 21167044 ggcatgaaactcaacctcgccgtcgatctaagcctcatcctcaacaagtgcggcaaga 21166987 Score = 42.1 bits (21), Expect = 1.7 Identities = 60/73 (82%) Strand = Plus / Minus Query: 196 aaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaac 255 ||||||||| | || ||| ||||||||||||| ||| |||| |||| ||| || ||||| Sbjct: 21150535 aaggccaacgtgctcggcgtcaacctcaacgtccccgtcgagctcaagctcatcctcaac 21150476 Query: 256 tactgcggcaaga 268 | |||||||||| Sbjct: 21150475 aagtgcggcaaga 21150463 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 154 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgct 194 ||||||||| |||| || || |||||||| ||||||||||| Sbjct: 21147925 ctcgccgacgtggacgccgccgtgtgcctctgcacggcgct 21147885
>ref|XM_473448.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 393 Score = 131 bits (66), Expect = 2e-27 Identities = 135/158 (85%) Strand = Plus / Plus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 ||||||||||| ||||| | ||||||||| |||||| ||||||||||| ||||| |||| Sbjct: 227 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtatgcctctgca 286 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 |||| ||| | ||||||||| ||||||||||||||| | ||| |||||||||||||| Sbjct: 287 cggccatcagaggcaacatcctcggcatcaacctcaacctccccgtcgacctcagcctca 346 Query: 248 tcgtcaactactgcggcaagaacgtccccgccggcttc 285 || ||||||||||||||||| ||| ||| |||||||| Sbjct: 347 tcctcaactactgcggcaagcgcgtgcccaccggcttc 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||||||||||||||||||||||||||||||| Sbjct: 153 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 188
>gb|AY466109.1| Oryza sativa (japonica cultivar-group) lipid transfer protein-like protein (LTP2) mRNA, complete cds Length = 758 Score = 131 bits (66), Expect = 2e-27 Identities = 135/158 (85%) Strand = Plus / Plus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 ||||||||||| ||||| | ||||||||| |||||| ||||||||||| ||||| |||| Sbjct: 302 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtatgcctctgca 361 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 |||| ||| | ||||||||| ||||||||||||||| | ||| |||||||||||||| Sbjct: 362 cggccatcagaggcaacatcctcggcatcaacctcaacctccccgtcgacctcagcctca 421 Query: 248 tcgtcaactactgcggcaagaacgtccccgccggcttc 285 || ||||||||||||||||| ||| ||| |||||||| Sbjct: 422 tcctcaactactgcggcaagcgcgtgcccaccggcttc 459 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||||||||||||||||||||||||||||||| Sbjct: 228 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 263
>gb|AY108363.1| Zea mays PCO069442 mRNA sequence Length = 837 Score = 125 bits (63), Expect = 1e-25 Identities = 123/143 (86%) Strand = Plus / Plus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 ||||||||||| ||||| | | ||||||| |||||||||||| || || ||||| |||| Sbjct: 300 agccgtgctgctcgctgctggacgggctcgtcgacctggaggccgccgtctgcctctgca 359 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 | || |||||||||||||||| ||||||||||| ||| | |||||||||||||||||| Sbjct: 360 ccgccgtcaaggccaacatcctcggcatcaaccttaacctccccatcgacctcagcctca 419 Query: 248 tcgtcaactactgcggcaagaac 270 || ||||| |||||||||||||| Sbjct: 420 tcctcaacaactgcggcaagaac 442 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 53 acgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||||||||||||||||||||||||||||| Sbjct: 228 acgcgctgaagctgggcgtgtgcgccaacgtgct 261
>gb|AY108411.1| Zea mays PCO134698 mRNA sequence Length = 667 Score = 105 bits (53), Expect = 1e-19 Identities = 107/125 (85%) Strand = Plus / Plus Query: 151 gggctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatcctt 210 |||||||||||||| ||||| || || ||||| ||||| ||||||||||||||| | || Sbjct: 366 gggctcgccgacctagaggccgccgtctgcctctgcaccgcgctcaaggccaacgtgctc 425 Query: 211 ggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaac 270 |||||||||||| |||| ||| || | |||| ||| ||| |||||||||||||||||| | Sbjct: 426 ggcatcaacctcgacgtccccgtcaagctcaccctgctcctcaactactgcggcaagagc 485 Query: 271 gtccc 275 ||||| Sbjct: 486 gtccc 490 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 53 acgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||||| ||||||||||||||||||||||| Sbjct: 271 acgcgctgaaactgggcgtgtgcgccaacgtgct 304
>dbj|AK063037.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-D01, full insert sequence Length = 498 Score = 97.6 bits (49), Expect = 3e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 90 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 164 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 192 gctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgt 251 ||||||||||||| |||| ||||||||| ||||||| ||| |||||||| ||||||| | Sbjct: 173 gctcaaggccaacgtcctcggcatcaacatcaacgtccccgtcgacctcgtcctcctcct 232 Query: 252 caactactgc 261 |||||||||| Sbjct: 233 caactactgc 242
>dbj|AK062654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-E10, full insert sequence Length = 736 Score = 97.6 bits (49), Expect = 3e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 90 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 312 Score = 79.8 bits (40), Expect = 8e-12 Identities = 94/112 (83%) Strand = Plus / Plus Query: 150 ggggctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatcct 209 |||||||| |||||| || || || || ||||| ||||| || ||||||||||| |||| Sbjct: 369 ggggctcgtcgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaacgtcct 428 Query: 210 tggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgc 261 ||||||||| ||||||| ||| |||||||| ||||||| ||||||||||| Sbjct: 429 cggcatcaacatcaacgtccccgtcgacctcgtcctcctcctcaactactgc 480
>ref|XM_467171.1| Oryza sativa (japonica cultivar-group), mRNA Length = 757 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 154 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggc 213 ||||||||||| ||||| || || || || ||||| || ||||||||||| | || ||| Sbjct: 327 ctcgccgaccttgaggccgccgtctgtctctgcaccgccatcaaggccaacgtgctcggc 386 Query: 214 atcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtc 273 |||| |||| || | ||| || | |||||||||||||||||||||||||||||||||||| Sbjct: 387 atcaccctcgacatccccgtcaagctcagcctcctcgtcaactactgcggcaagaacgtc 446 Query: 274 cc 275 || Sbjct: 447 cc 448
>dbj|AK058218.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-F04, full insert sequence Length = 757 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 154 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggc 213 ||||||||||| ||||| || || || || ||||| || ||||||||||| | || ||| Sbjct: 327 ctcgccgaccttgaggccgccgtctgtctctgcaccgccatcaaggccaacgtgctcggc 386 Query: 214 atcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtc 273 |||| |||| || | ||| || | |||||||||||||||||||||||||||||||||||| Sbjct: 387 atcaccctcgacatccccgtcaagctcagcctcctcgtcaactactgcggcaagaacgtc 446 Query: 274 cc 275 || Sbjct: 447 cc 448
>gb|AY466108.1| Oryza sativa (japonica cultivar-group) lipid transfer protein-like protein (LTP1) mRNA, complete cds Length = 772 Score = 89.7 bits (45), Expect = 8e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 90 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 282 gtgcccgatcgacgcgctgaagctgagcgtgtgcgccaacgtgctcaac 330 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 194 tcaaggccaacatccttggcatcaacctcaac 225 |||||||||||||||| |||||||| |||||| Sbjct: 431 tcaaggccaacatcctcggcatcaatctcaac 462
>dbj|AK103618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133L09, full insert sequence Length = 780 Score = 89.7 bits (45), Expect = 8e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 90 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 303 gtgcccgatcgacgcgctgaagctgagcgtgtgcgccaacgtgctcaac 351 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 194 tcaaggccaacatccttggcatcaacctcaac 225 |||||||||||||||| |||||||| |||||| Sbjct: 452 tcaaggccaacatcctcggcatcaatctcaac 483
>ref|NM_197671.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.16), mRNA Length = 441 Score = 83.8 bits (42), Expect = 5e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgg 92 |||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 193 tgcccgatcgacgcgctgaagctgcgggtgtgcgccaacgtgctcaacgg 242 Score = 42.1 bits (21), Expect = 1.7 Identities = 60/73 (82%) Strand = Plus / Plus Query: 196 aaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaac 255 ||||||||| | || ||| ||||||||||||| ||| |||| |||| ||| || ||||| Sbjct: 343 aaggccaacgtgctcggcgtcaacctcaacgtccccgtcgagctcaagctcatcctcaac 402 Query: 256 tactgcggcaaga 268 | |||||||||| Sbjct: 403 aagtgcggcaaga 415
>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete sequence Length = 144798 Score = 83.8 bits (42), Expect = 5e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgg 92 |||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 66285 tgcccgatcgacgcgctgaagctgcgggtgtgcgccaacgtgctcaacgg 66334 Score = 81.8 bits (41), Expect = 2e-12 Identities = 116/141 (82%) Strand = Plus / Plus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 34112 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 34171 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 | || ||||||||||| | || ||| ||||||||||| | |||||||||||||||||| Sbjct: 34172 ccgccatcaaggccaacgtgctcggcctcaacctcaacatccccatcgacctcagcctca 34231 Query: 248 tcgtcaactactgcggcaaga 268 || ||||| |||||||||||| Sbjct: 34232 tcctcaacaactgcggcaaga 34252 Score = 81.8 bits (41), Expect = 2e-12 Identities = 116/141 (82%) Strand = Plus / Plus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 27398 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 27457 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 | || ||||||||||| | || |||||||| |||||| | |||||||||||||||||| Sbjct: 27458 ccgccatcaaggccaacgtgctgggcatcaagctcaacctccccatcgacctcagcctca 27517 Query: 248 tcgtcaactactgcggcaaga 268 || ||||| |||||||||||| Sbjct: 27518 tcctcaacaactgcggcaaga 27538 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 95 |||||||||||||| ||||||||| | |||||| ||||||||||||||||||| Sbjct: 49761 tgcccgatcgacgccctgaagctgagggtgtgcaccaacgtgctcaacgggct 49813 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 95 |||||||||||||| |||||||| | ||||| |||||||||||||||||||| Sbjct: 61915 tgcccgatcgacgccttgaagctgagggtgtgtgccaacgtgctcaacgggct 61967 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 95 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 57169 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 57221 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 95 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 53876 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 53928 Score = 65.9 bits (33), Expect = 1e-07 Identities = 114/141 (80%) Strand = Plus / Plus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 30666 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 30725 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 | || ||||||||||| | || |||||||| ||| || | ||| |||||||||||||| Sbjct: 30726 ccgccgtcaaggccaacgtgctcggcatcaagctcgacctccccgtcgacctcagcctca 30785 Query: 248 tcgtcaactactgcggcaaga 268 || ||||| |||||||||||| Sbjct: 30786 tcctcaacaactgcggcaaga 30806 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctc 87 ||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 34026 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgctc 34071 Score = 58.0 bits (29), Expect = 3e-05 Identities = 94/115 (81%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 157 gccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttgg---c 213 |||||||| || || || || ||||| ||||| || ||||||||||| | ||||| | Sbjct: 62026 gccgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaacgttcttgggatc 62085 Query: 214 atcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaaga 268 |||||||||||| | ||| |||| ||||||||| || ||||| |||||||||||| Sbjct: 62086 atcaacctcaacatccccgtcgatctcagcctcatcctcaacaactgcggcaaga 62140 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 27312 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgct 27356 Score = 56.0 bits (28), Expect = 1e-04 Identities = 100/124 (80%) Strand = Plus / Plus Query: 132 gtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgcacggc 191 ||||||| ||||| | |||||| |||||||||| || || || || ||||| ||||| || Sbjct: 57255 gtgctgctcgctgctgcaggggatcgccgacctcgacgccgccgtctgcctctgcaccgc 57314 Query: 192 gctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgt 251 |||||||||| | || ||||||||||||||| | ||| |||| || |||||| || | Sbjct: 57315 cgtcaaggccaatgtgctgggcatcaacctcaacctccccgtcgatctgagcctcatcct 57374 Query: 252 caac 255 |||| Sbjct: 57375 caac 57378 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 132 gtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgcacggc 191 ||||||| ||||| | |||||| |||||||||| || || || || ||||| ||||| || Sbjct: 53962 gtgctgctcgctgctgcaggggatcgccgacctcgacgccgccgtctgcctctgcaccgc 54021 Query: 192 gctcaaggccaacatccttggcatcaacct 221 ||||||||||| | || ||||||||||| Sbjct: 54022 cgtcaaggccaacgtgctgggcatcaacct 54051 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 ||||||| |||||||||||||||||| | ||||||| ||||||| Sbjct: 68897 gtgcccgttcgacgcgctgaagctggcggcgtgcgccgacgtgct 68941 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 ||||||| ||||||| |||||||| | ||||||||||||||||| Sbjct: 30580 gtgcccgcgcgacgcgttgaagctgcgggtgtgcgccaacgtgct 30624 Score = 44.1 bits (22), Expect = 0.43 Identities = 94/118 (79%) Strand = Plus / Plus Query: 151 gggctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatcctt 210 |||||||||||||| || || || || ||||| ||||| || ||||||||||| | || Sbjct: 49866 gggctcgccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaacgtgctc 49925 Query: 211 ggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaaga 268 ||||| || |||||| | || |||| || |||||| || ||||| | |||||||||| Sbjct: 49926 ggcatgaaactcaacctcgccgtcgatctaagcctcatcctcaacaagtgcggcaaga 49983 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 154 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgct 194 ||||||||| |||| || || |||||||| ||||||||||| Sbjct: 69045 ctcgccgacgtggacgccgccgtgtgcctctgcacggcgct 69085 Score = 42.1 bits (21), Expect = 1.7 Identities = 60/73 (82%) Strand = Plus / Plus Query: 196 aaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaac 255 ||||||||| | || ||| ||||||||||||| ||| |||| |||| ||| || ||||| Sbjct: 66435 aaggccaacgtgctcggcgtcaacctcaacgtccccgtcgagctcaagctcatcctcaac 66494 Query: 256 tactgcggcaaga 268 | |||||||||| Sbjct: 66495 aagtgcggcaaga 66507
>gb|L27210.1|RICRCG2 Oryza sativa root-specific protein (RCg2) gene, complete cds Length = 2252 Score = 83.8 bits (42), Expect = 5e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgg 92 |||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 1849 tgcccgatcgacgcgctgaagctgcgggtgtgcgccaacgtgctcaacgg 1898 Score = 42.1 bits (21), Expect = 1.7 Identities = 60/73 (82%) Strand = Plus / Plus Query: 196 aaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaac 255 ||||||||| | || ||| ||||||||||||| ||| |||| |||| ||| || ||||| Sbjct: 1999 aaggccaacgtgctcggcgtcaacctcaacgtccccgtcgagctcaagctcatcctcaac 2058 Query: 256 tactgcggcaaga 268 | |||||||||| Sbjct: 2059 aagtgcggcaaga 2071
>gb|L27209.1|RICRCC2 Oryza sativa root-specific RCc2 mRNA, complete cds Length = 654 Score = 83.8 bits (42), Expect = 5e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgg 92 |||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 237 tgcccgatcgacgcgctgaagctgcgggtgtgcgccaacgtgctcaacgg 286 Score = 42.1 bits (21), Expect = 1.7 Identities = 60/73 (82%) Strand = Plus / Plus Query: 196 aaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaac 255 ||||||||| | || ||| ||||||||||||| ||| |||| |||| ||| || ||||| Sbjct: 387 aaggccaacgtgctcggcgtcaacctcaacgtccccgtcgagctcaagctcatcctcaac 446 Query: 256 tactgcggcaaga 268 | |||||||||| Sbjct: 447 aagtgcggcaaga 459
>ref|NM_197681.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.6), mRNA Length = 399 Score = 81.8 bits (41), Expect = 2e-12 Identities = 116/141 (82%) Strand = Plus / Plus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 227 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 286 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 | || ||||||||||| | || |||||||| |||||| | |||||||||||||||||| Sbjct: 287 ccgccatcaaggccaacgtgctgggcatcaagctcaacctccccatcgacctcagcctca 346 Query: 248 tcgtcaactactgcggcaaga 268 || ||||| |||||||||||| Sbjct: 347 tcctcaacaactgcggcaaga 367 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 141 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgct 185
>ref|NM_197679.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.8), mRNA Length = 402 Score = 81.8 bits (41), Expect = 2e-12 Identities = 116/141 (82%) Strand = Plus / Plus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 233 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 292 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 | || ||||||||||| | || ||| ||||||||||| | |||||||||||||||||| Sbjct: 293 ccgccatcaaggccaacgtgctcggcctcaacctcaacatccccatcgacctcagcctca 352 Query: 248 tcgtcaactactgcggcaaga 268 || ||||| |||||||||||| Sbjct: 353 tcctcaacaactgcggcaaga 373 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctc 87 ||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 147 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgctc 192
>ref|NM_195931.1| Oryza sativa (japonica cultivar-group) putative lipid tranfer protein (OSJNAb0078C13.15), mRNA Length = 381 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatc 99 |||||||||||||| ||||||||| | |||||||||||| ||||||||||||||||| Sbjct: 130 tgcccgatcgacgccctgaagctgagggtgtgcgccaacctgctcaacgggctgatc 186 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 213 catcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaac 270 ||||||||||||| ||||| ||||||||||| || || ||||| | |||||||||||| Sbjct: 300 catcaacctcaacctgcccgtcgacctcagcatcatcctcaacaagtgcggcaagaac 357
>gb|AC123594.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0078C13, complete sequence Length = 146538 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatc 99 |||||||||||||| ||||||||| | |||||||||||| ||||||||||||||||| Sbjct: 89236 tgcccgatcgacgccctgaagctgagggtgtgcgccaacctgctcaacgggctgatc 89180 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 213 catcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaac 270 ||||||||||||| ||||| ||||||||||| || || ||||| | |||||||||||| Sbjct: 89066 catcaacctcaacctgcccgtcgacctcagcatcatcctcaacaagtgcggcaagaac 89009 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctg 96 |||||||| ||||| |||||||| | |||||||||||||||||||| |||||| Sbjct: 80280 tgcccgatggacgctttgaagctgagagtgtgcgccaacgtgctcaaggggctg 80227 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 ||||||||| |||| ||||||||| | ||||||||||||||||| Sbjct: 72591 tgcccgatcaacgccctgaagctgagagtgtgcgccaacgtgct 72548 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 59 tgaagctgggcgtgtgcgccaacgtgctcaacgggctg 96 |||||||| | ||||||||||||||||| ||||||||| Sbjct: 65047 tgaagctgagagtgtgcgccaacgtgctaaacgggctg 65010
>dbj|AK062848.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-H12, full insert sequence Length = 662 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatc 99 |||||||||||||| ||||||||| | |||||||||||| ||||||||||||||||| Sbjct: 192 tgcccgatcgacgccctgaagctgagggtgtgcgccaacctgctcaacgggctgatc 248 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 213 catcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaac 270 ||||||||||||| ||||| ||||||||||| || || ||||| | |||||||||||| Sbjct: 362 catcaacctcaacctgcccgtcgacctcagcatcatcctcaacaagtgcggcaagaac 419
>dbj|AK062381.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-B09, full insert sequence Length = 702 Score = 81.8 bits (41), Expect = 2e-12 Identities = 116/141 (82%) Strand = Plus / Plus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 296 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 355 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 | || ||||||||||| | || |||||||| |||||| | |||||||||||||||||| Sbjct: 356 ccgccatcaaggccaacgtgctgggcatcaagctcaacctccccatcgacctcagcctca 415 Query: 248 tcgtcaactactgcggcaaga 268 || ||||| |||||||||||| Sbjct: 416 tcctcaacaactgcggcaaga 436 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 210 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgct 254
>dbj|AK063684.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-E11, full insert sequence Length = 800 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 211 ggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaac 270 ||||||||||||||| | |||||| ||||||||||| || |||||| |||||||||| | Sbjct: 394 ggcatcaacctcaacctccccatccacctcagcctcatcctcaacttctgcggcaagggc 453 Query: 271 gtccccgccggcttc 285 |||||| |||||||| Sbjct: 454 gtccccaccggcttc 468 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 348 gtgcccgacggacgcgctgaagctgggggtgtgcgcgaacgtgct 392
>dbj|AK062911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-G07, full insert sequence Length = 757 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 194 tcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtca 253 ||||||||||| | || ||| ||||||||||| | |||||||||||||||||| || ||| Sbjct: 386 tcaaggccaacgtgctcggcctcaacctcaacatccccatcgacctcagcctcatcctca 445 Query: 254 actactgcggcaaga 268 || |||||||||||| Sbjct: 446 acaactgcggcaaga 460 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctc 87 ||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 234 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgctc 279
>ref|NM_197676.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.11), mRNA Length = 411 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 95 |||||||||||||| ||||||||| | |||||| ||||||||||||||||||| Sbjct: 163 tgcccgatcgacgccctgaagctgagggtgtgcaccaacgtgctcaacgggct 215 Score = 44.1 bits (22), Expect = 0.43 Identities = 94/118 (79%) Strand = Plus / Plus Query: 151 gggctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatcctt 210 |||||||||||||| || || || || ||||| ||||| || ||||||||||| | || Sbjct: 268 gggctcgccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaacgtgctc 327 Query: 211 ggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaaga 268 ||||| || |||||| | || |||| || |||||| || ||||| | |||||||||| Sbjct: 328 ggcatgaaactcaacctcgccgtcgatctaagcctcatcctcaacaagtgcggcaaga 385
>gb|AY105972.1| Zea mays PCO122221 mRNA sequence Length = 768 Score = 71.9 bits (36), Expect = 2e-09 Identities = 123/152 (80%) Strand = Plus / Plus Query: 130 ccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgcacg 189 ||||||||| ||||| | |||| |||| |||||| ||||| || |||||||| ||||| Sbjct: 307 ccgtgctgcccgctgctgaagggactcgtcgacctcgaggccgccgtgtgcctctgcacc 366 Query: 190 gcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctc 249 || |||||| | |||| || ||||| |||||| ||||| |||||||||||||| || Sbjct: 367 gccatcaagggagaggtcctcggaatcaagctcaacctgcccgtcgacctcagcctcatc 426 Query: 250 gtcaactactgcggcaagaacgtccccgccgg 281 ||||| |||||||||||| ||| ||| |||| Sbjct: 427 ctcaaccactgcggcaagaccgtgcccaccgg 458 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaa 80 ||||||||| |||||||||||||||||||| Sbjct: 231 cgacgcgctcaagctgggcgtgtgcgccaa 260
>ref|NM_197680.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.7), mRNA Length = 375 Score = 65.9 bits (33), Expect = 1e-07 Identities = 114/141 (80%) Strand = Plus / Plus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 203 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 262 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 | || ||||||||||| | || |||||||| ||| || | ||| |||||||||||||| Sbjct: 263 ccgccgtcaaggccaacgtgctcggcatcaagctcgacctccccgtcgacctcagcctca 322 Query: 248 tcgtcaactactgcggcaaga 268 || ||||| |||||||||||| Sbjct: 323 tcctcaacaactgcggcaaga 343 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 ||||||| ||||||| |||||||| | ||||||||||||||||| Sbjct: 117 gtgcccgcgcgacgcgttgaagctgcgggtgtgcgccaacgtgct 161
>ref|NM_197675.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.12), mRNA Length = 396 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 95 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 148 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 200 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 132 gtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgcacggc 191 ||||||| ||||| | |||||| |||||||||| || || || || ||||| ||||| || Sbjct: 234 gtgctgctcgctgctgcaggggatcgccgacctcgacgccgccgtctgcctctgcaccgc 293 Query: 192 gctcaaggccaacatccttggcatcaacct 221 ||||||||||| | || ||||||||||| Sbjct: 294 cgtcaaggccaacgtgctgggcatcaacct 323
>ref|NM_197674.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.13), mRNA Length = 396 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 95 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 148 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 200 Score = 56.0 bits (28), Expect = 1e-04 Identities = 100/124 (80%) Strand = Plus / Plus Query: 132 gtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgcacggc 191 ||||||| ||||| | |||||| |||||||||| || || || || ||||| ||||| || Sbjct: 234 gtgctgctcgctgctgcaggggatcgccgacctcgacgccgccgtctgcctctgcaccgc 293 Query: 192 gctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgt 251 |||||||||| | || ||||||||||||||| | ||| |||| || |||||| || | Sbjct: 294 cgtcaaggccaatgtgctgggcatcaacctcaacctccccgtcgatctgagcctcatcct 353 Query: 252 caac 255 |||| Sbjct: 354 caac 357
>ref|NM_197672.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.15), mRNA Length = 429 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 95 |||||||||||||| |||||||| | ||||| |||||||||||||||||||| Sbjct: 178 tgcccgatcgacgccttgaagctgagggtgtgtgccaacgtgctcaacgggct 230 Score = 58.0 bits (29), Expect = 3e-05 Identities = 94/115 (81%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 157 gccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttgg---c 213 |||||||| || || || || ||||| ||||| || ||||||||||| | ||||| | Sbjct: 289 gccgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaacgttcttgggatc 348 Query: 214 atcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaaga 268 |||||||||||| | ||| |||| ||||||||| || ||||| |||||||||||| Sbjct: 349 atcaacctcaacatccccgtcgatctcagcctcatcctcaacaactgcggcaaga 403
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 87 |||||||||||||||| |||||||||||||||||||| Sbjct: 24131130 cgacgcgctgaagctgcgcgtgtgcgccaacgtgctc 24131166 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 ctcctcgtcaactactgcggc 264 ||||||||||||||||||||| Sbjct: 16863511 ctcctcgtcaactactgcggc 16863531
>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0028A08 Length = 150818 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 87 |||||||||||||||| |||||||||||||||||||| Sbjct: 84616 cgacgcgctgaagctgcgcgtgtgcgccaacgtgctc 84652
>dbj|AK102086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082M21, full insert sequence Length = 769 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 95 |||||||||||||| |||||||| | ||||| |||||||||||||||||||| Sbjct: 257 tgcccgatcgacgccttgaagctgagggtgtgtgccaacgtgctcaacgggct 309 Score = 58.0 bits (29), Expect = 3e-05 Identities = 94/115 (81%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 157 gccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttgg---c 213 |||||||| || || || || ||||| ||||| || ||||||||||| | ||||| | Sbjct: 368 gccgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaacgttcttgggatc 427 Query: 214 atcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaaga 268 |||||||||||| | ||| |||| ||||||||| || ||||| |||||||||||| Sbjct: 428 atcaacctcaacatccccgtcgatctcagcctcatcctcaacaactgcggcaaga 482
>dbj|AK063090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-A12, full insert sequence Length = 627 Score = 65.9 bits (33), Expect = 1e-07 Identities = 114/141 (80%) Strand = Plus / Plus Query: 128 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 187 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 288 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 347 Query: 188 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 247 | || ||||||||||| | || |||||||| ||| || | ||| |||||||||||||| Sbjct: 348 ccgccgtcaaggccaacgtgctcggcatcaagctcgacctccccgtcgacctcagcctca 407 Query: 248 tcgtcaactactgcggcaaga 268 || ||||| |||||||||||| Sbjct: 408 tcctcaacaactgcggcaaga 428 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 ||||||| ||||||| |||||||| | ||||||||||||||||| Sbjct: 202 gtgcccgcgcgacgcgttgaagctgcgggtgtgcgccaacgtgct 246
>ref|NM_195930.1| Oryza sativa (japonica cultivar-group) putative lipid tranfer protein (OSJNAb0078C13.14), mRNA Length = 393 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctg 96 |||||||| ||||| |||||||| | |||||||||||||||||||| |||||| Sbjct: 145 tgcccgatggacgctttgaagctgagagtgtgcgccaacgtgctcaaggggctg 198
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgctca 88 |||||||||||||||| | ||||||||||||||||||| Sbjct: 9364 cgacgcgctgaagctgcgtgtgtgcgccaacgtgctca 9327
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgctca 88 |||||||||||||||| | ||||||||||||||||||| Sbjct: 87252 cgacgcgctgaagctgcgtgtgtgcgccaacgtgctca 87289
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgctca 88 |||||||||||||||| | ||||||||||||||||||| Sbjct: 11807633 cgacgcgctgaagctgcgtgtgtgcgccaacgtgctca 11807596
>gb|AY104687.1| Zea mays PCO121733 mRNA sequence Length = 680 Score = 60.0 bits (30), Expect = 7e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 176 tgtgcctgtgcacggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcg 235 ||||||| ||||| || ||||||||||| |||| |||||| |||||||||||||| | Sbjct: 348 tgtgcctctgcaccgccatcaaggccaacgtcctcggcatccacctcaacgtgcccctta 407 Query: 236 acctcagcctcctcgtcaactactgcggca 265 ||||| |||| || ||||| ||||||||| Sbjct: 408 gcctcaacctcatcctcaacaactgcggca 437 Score = 48.1 bits (24), Expect = 0.028 Identities = 39/44 (88%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 ||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 224 tgcccgatcgacgcgctcaagctcaaggtgtgcgccaacgtgct 267
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgctca 88 |||||||||||||||| | ||||||||||||||||||| Sbjct: 11886044 cgacgcgctgaagctgcgtgtgtgcgccaacgtgctca 11886007
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 87 |||||||||||||||| | |||||||||||||||||| Sbjct: 30578544 cgacgcgctgaagctgcgtgtgtgcgccaacgtgctc 30578508 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 gcgctgaagctgggcgtgtg 74 |||||||||||||||||||| Sbjct: 4437647 gcgctgaagctgggcgtgtg 4437666
>dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0036G09 Length = 124118 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 87 |||||||||||||||| | |||||||||||||||||| Sbjct: 61148 cgacgcgctgaagctgcgtgtgtgcgccaacgtgctc 61112
>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1060H01 Length = 157987 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 87 |||||||||||||||| | |||||||||||||||||| Sbjct: 20821 cgacgcgctgaagctgcgtgtgtgcgccaacgtgctc 20785
>ref|NM_185028.1| Oryza sativa (japonica cultivar-group), mRNA Length = 459 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||||||||||| | ||||||||||||||||| Sbjct: 87 cgacgcgctgaagctgcgtgtgtgcgccaacgtgct 122
>emb|Z12103.1|ZMDELINM Z.mays mRNA that delineates a novel subset of cortical cells Length = 594 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 176 tgtgcctgtgcacggcgctcaaggccaacatccttggcatcaacctcaacgtgccc 231 ||||||| ||||| || ||||||||||| |||| |||||| |||||||||||||| Sbjct: 286 tgtgcctctgcaccgccatcaaggccaacgtcctcggcatccacctcaacgtgccc 341 Score = 40.1 bits (20), Expect = 6.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 ||||||||||||||||| ||||| ||||||||||| ||||| Sbjct: 162 tgcccgatcgacgcgctcaagctcaaggtgtgcgccaaagtgct 205
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete sequence Length = 144487 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||||||||||| | ||||||||||||||||| Sbjct: 130348 cgacgcgctgaagctgcgtgtgtgcgccaacgtgct 130383
>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete sequence Length = 139823 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 |||||||||||||||| | ||||||||||||||||| Sbjct: 9101 cgacgcgctgaagctgcgtgtgtgcgccaacgtgct 9136
>ref|NM_185320.1| Oryza sativa (japonica cultivar-group), mRNA Length = 903 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 194 tcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtca 253 |||| |||||| | || ||| |||||||| |||| ||| |||||||| ||||||| ||| Sbjct: 248 tcaacgccaaccttctcggcctcaacctcgacgtccccgtcgacctctccctcctcctca 307 Query: 254 actactgcggc 264 ||||||||||| Sbjct: 308 actactgcggc 318
>ref|XM_473863.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 465 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 247 ctcgtcaactactgcggcaagaacgtccccgccggcttccagtgccc 293 ||||||||| | ||||||||| |||||||| || ||||||||||||| Sbjct: 412 ctcgtcaacgagtgcggcaagcacgtcccctccagcttccagtgccc 458
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence Length = 160484 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 247 ctcgtcaactactgcggcaagaacgtccccgccggcttccagtgccc 293 ||||||||| | ||||||||| |||||||| || ||||||||||||| Sbjct: 78143 ctcgtcaacgagtgcggcaagcacgtcccctccagcttccagtgccc 78189 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 247 ctcgtcaactactgcggcaagaacgtccccgccggcttccagtgccc 293 |||||||| ||||||||||| |||| ||| ||| |||||||||||| Sbjct: 67724 ctcgtcaatgactgcggcaagtacgtgccctccgacttccagtgccc 67770
>gb|AF149815.1| Oryza sativa unknown gene Length = 1293 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 194 tcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtca 253 |||| |||||| | || ||| |||||||| |||| ||| |||||||| ||||||| ||| Sbjct: 90 tcaacgccaaccttctcggcctcaacctcgacgtccccgtcgacctctccctcctcctca 149 Query: 254 actactgcggc 264 ||||||||||| Sbjct: 150 actactgcggc 160
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 194 tcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtca 253 |||| |||||| | || ||| |||||||| |||| ||| |||||||| ||||||| ||| Sbjct: 343404 tcaacgccaaccttctcggcctcaacctcgacgtccccgtcgacctctccctcctcctca 343463 Query: 254 actactgcggc 264 ||||||||||| Sbjct: 343464 actactgcggc 343474 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 42 gtgcccgatcgacgcgctgaagctg 66 ||||||||||||||||||||||||| Sbjct: 3455297 gtgcccgatcgacgcgctgaagctg 3455273
>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644B06 Length = 194509 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 194 tcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtca 253 |||| |||||| | || ||| |||||||| |||| ||| |||||||| ||||||| ||| Sbjct: 53357 tcaacgccaaccttctcggcctcaacctcgacgtccccgtcgacctctccctcctcctca 53416 Query: 254 actactgcggc 264 ||||||||||| Sbjct: 53417 actactgcggc 53427
>dbj|AK062781.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-B03, full insert sequence Length = 713 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 247 ctcgtcaactactgcggcaagaacgtccccgccggcttccagtgccc 293 ||||||||| | ||||||||| |||||||| || ||||||||||||| Sbjct: 272 ctcgtcaacgagtgcggcaagcacgtcccctccagcttccagtgccc 318
>ref|NM_195926.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNAb0078C13.10), mRNA Length = 414 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 59 tgaagctgggcgtgtgcgccaacgtgctcaacgggctg 96 |||||||| | ||||||||||||||||| ||||||||| Sbjct: 182 tgaagctgagagtgtgcgccaacgtgctaaacgggctg 219
>gb|AF001634.1|AF001634 Zea mays physical impedance induced protein (IIG1) mRNA, complete cds Length = 677 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 176 tgtgcctgtgcacggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcg 235 ||||||| ||||| || ||||||||||| |||| |||||| ||||| |||||||| | Sbjct: 361 tgtgcctctgcaccgccatcaaggccaacgtcctcggcatccacctccacgtgcccctta 420 Query: 236 acctcagcctcctcgtcaactactgcggca 265 ||||| |||| || ||||| ||||||||| Sbjct: 421 gcctcaacctcatcctcaacaactgcggca 450 Score = 48.1 bits (24), Expect = 0.028 Identities = 39/44 (88%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 ||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 237 tgcccgatcgacgcgctcaagctcaaggtgtgcgccaacgtgct 280
>ref|XM_550375.1| Oryza sativa (japonica cultivar-group), mRNA Length = 992 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctg 66 ||||||||||||||||||||||||| Sbjct: 508 gtgcccgatcgacgcgctgaagctg 532
>ref|NM_197670.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.17), mRNA Length = 489 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 ||||||| |||||||||||||||||| | ||||||| ||||||| Sbjct: 189 gtgcccgttcgacgcgctgaagctggcggcgtgcgccgacgtgct 233 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 154 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgct 194 ||||||||| |||| || || |||||||| ||||||||||| Sbjct: 337 ctcgccgacgtggacgccgccgtgtgcctctgcacggcgct 377
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 87 ||||||||| |||||| ||||||||||||| |||||| Sbjct: 19948991 cgacgcgctaaagctgcgcgtgtgcgccaatgtgctc 19949027
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0033B09 Length = 143545 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 42 gtgcccgatcgacgcgctgaagctg 66 ||||||||||||||||||||||||| Sbjct: 72001 gtgcccgatcgacgcgctgaagctg 71977
>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone P0680A03 Length = 156054 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 42 gtgcccgatcgacgcgctgaagctg 66 ||||||||||||||||||||||||| Sbjct: 146851 gtgcccgatcgacgcgctgaagctg 146827
>dbj|AK107851.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-A09, full insert sequence Length = 764 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 ||||||| |||||||||||||||||| | ||||||| ||||||| Sbjct: 268 gtgcccgttcgacgcgctgaagctggcggcgtgcgccgacgtgct 312 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 154 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgct 194 ||||||||| |||| || || |||||||| ||||||||||| Sbjct: 416 ctcgccgacgtggacgccgccgtgtgcctctgcacggcgct 456
>dbj|AK103637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033134F12, full insert sequence Length = 1013 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctg 66 ||||||||||||||||||||||||| Sbjct: 508 gtgcccgatcgacgcgctgaagctg 532
>dbj|AK101305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033M04, full insert sequence Length = 992 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctg 66 ||||||||||||||||||||||||| Sbjct: 508 gtgcccgatcgacgcgctgaagctg 532
>dbj|AK059170.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E12, full insert sequence Length = 1384 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctg 66 ||||||||||||||||||||||||| Sbjct: 925 gtgcccgatcgacgcgctgaagctg 949
>gb|AY105236.1| Zea mays PCO121732 mRNA sequence Length = 763 Score = 50.1 bits (25), Expect = 0.007 Identities = 76/93 (81%) Strand = Plus / Plus Query: 176 tgtgcctgtgcacggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcg 235 ||||||| ||||| || ||||||||||| |||| |||||| ||||||| ||||| | Sbjct: 354 tgtgcctctgcaccgccatcaaggccaacgtcctcggcatccacctcaatatgcccctta 413 Query: 236 acctcagcctcctcgtcaactactgcggcaaga 268 ||||| |||| || ||||| |||||||||||| Sbjct: 414 gcctcaacctcatcctcaacaactgcggcaaga 446 Score = 40.1 bits (20), Expect = 6.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 86 ||||||||||||||||| || || ||||||||||||||||| Sbjct: 230 tgcccgatcgacgcgctcaaactcaaggtgtgcgccaacgtgct 273
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 87 ||||||||| |||||| ||||||||||||| |||||| Sbjct: 19875205 cgacgcgctaaagctgcgcgtgtgcgccaatgtgctc 19875241
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165433 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 51 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 87 ||||||||| |||||| ||||||||||||| |||||| Sbjct: 78269 cgacgcgctaaagctgcgcgtgtgcgccaatgtgctc 78233
>gb|BT017960.1| Zea mays clone EL01N0523B04.c mRNA sequence Length = 1282 Score = 48.1 bits (24), Expect = 0.028 Identities = 54/64 (84%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaa 101 ||||||||||||| ||||||||||| || ||||| ||||||| | |||||||||| | Sbjct: 636 gtgcccgatcgacacgctgaagctgaacgcgtgcgtggacgtgctgagcgggctgatcca 695 Query: 102 cctg 105 |||| Sbjct: 696 cctg 699
>emb|X60432.1|ZMPRP Z.mays PRP gene Length = 1402 Score = 48.1 bits (24), Expect = 0.028 Identities = 54/64 (84%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaa 101 ||||||||||||| ||||||||||| || ||||| ||||||| | |||||||||| | Sbjct: 762 gtgcccgatcgacacgctgaagctgaacgcgtgcgtggacgtgctgagcgggctgatcca 821 Query: 102 cctg 105 |||| Sbjct: 822 cctg 825
>gb|AY105001.1| Zea mays PCO123892 mRNA sequence Length = 1144 Score = 48.1 bits (24), Expect = 0.028 Identities = 54/64 (84%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaa 101 ||||||||||||| ||||||||||| || ||||| ||||||| | |||||||||| | Sbjct: 423 gtgcccgatcgacacgctgaagctgaacgcgtgcgtggacgtgctgagcgggctgatcca 482 Query: 102 cctg 105 |||| Sbjct: 483 cctg 486
>dbj|AP004494.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09I17, TM0026, complete sequence Length = 103129 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Minus Query: 206 tccttggcatcaacctcaacgtgcccatcgac 237 |||||||||||||||||||| | ||||||||| Sbjct: 5891 tccttggcatcaacctcaacatccccatcgac 5860 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Minus Query: 206 tccttggcatcaacctcaacgtgcccatcgac 237 |||||||||||||||||||| | ||||||||| Sbjct: 5303 tccttggcatcaacctcaacatccccatcgac 5272
>ref|XM_474092.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 783 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 76 |||||| ||||||||||| ||||| |||||||||| Sbjct: 540 gtgccccatcgacgcgctcaagctcggcgtgtgcg 574
>ref|XM_473862.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 609 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 247 ctcgtcaactactgcggcaagaacgtccccgccggcttccagtgccc 293 |||||||| ||||||||||| |||| ||| ||| |||||||||||| Sbjct: 538 ctcgtcaatgactgcggcaagtacgtgccctccgacttccagtgccc 584
>ref|XM_473450.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 414 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Plus Query: 154 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaac 204 ||||||||||| ||||| || || ||||| |||||||| ||||||||||| Sbjct: 271 ctcgccgacctcgaggccgccgtctgcctctgcacggccatcaaggccaac 321 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 241 agcctcctcgtcaactactgcggcaagaacgtcccc 276 |||||||| ||||||||||| |||||| ||||||| Sbjct: 358 agcctccttgtcaactactgtggcaagtgcgtcccc 393
>ref|XM_809128.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053510201.50) partial mRNA Length = 10449 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 ggaggcagcggtggcggtggcgg 23 ||||||||||||||||||||||| Sbjct: 4952 ggaggcagcggtggcggtggcgg 4930
>emb|Z93108.1|MAZ93108 M.acuminata mRNA; clone pBAN UU70 Length = 785 Score = 46.1 bits (23), Expect = 0.11 Identities = 109/140 (77%) Strand = Plus / Plus Query: 154 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggc 213 |||| |||||| ||||| || |||||||| ||| | || ||| |||| | |||||||| Sbjct: 351 ctcgtcgacctcgaggccgccgtgtgcctttgcnctgctatcanggccnatgtccttggc 410 Query: 214 atcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtc 273 || | |||||| | |||||| | |||||| ||| ||||||||||||| |||| | Sbjct: 411 attcatctcaacctccccatcnncttcagccntctcctcaactactgcggtnagaaggct 470 Query: 274 cccgccggcttccagtgccc 293 ||| |||| ||||||||||| Sbjct: 471 cccaccggtttccagtgccc 490
>dbj|AK108560.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-A10, full insert sequence Length = 719 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 70 gtgtgcgccaacgtgctcaacgggctg 96 ||||||||||||||||| ||||||||| Sbjct: 274 gtgtgcgccaacgtgctaaacgggctg 300
>dbj|AK105903.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F11, full insert sequence Length = 1255 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 76 |||||| ||||||||||| ||||| |||||||||| Sbjct: 690 gtgccccatcgacgcgctcaagctcggcgtgtgcg 724
>dbj|AK105778.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-F10, full insert sequence Length = 1242 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 76 |||||| ||||||||||| ||||| |||||||||| Sbjct: 690 gtgccccatcgacgcgctcaagctcggcgtgtgcg 724
>dbj|AK104623.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-H11, full insert sequence Length = 1251 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 76 |||||| ||||||||||| ||||| |||||||||| Sbjct: 686 gtgccccatcgacgcgctcaagctcggcgtgtgcg 720
>dbj|AK071989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094H13, full insert sequence Length = 1272 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 76 |||||| ||||||||||| ||||| |||||||||| Sbjct: 694 gtgccccatcgacgcgctcaagctcggcgtgtgcg 728
>dbj|AK067441.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100E18, full insert sequence Length = 2106 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 ggaggcagcggtggcggtggcgg 23 ||||||||||||||||||||||| Sbjct: 384 ggaggcagcggtggcggtggcgg 406
>dbj|AK061322.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F03, full insert sequence Length = 1257 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 76 |||||| ||||||||||| ||||| |||||||||| Sbjct: 692 gtgccccatcgacgcgctcaagctcggcgtgtgcg 726
>emb|AL732331.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0413E07, complete sequence Length = 76546 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 76 |||||| ||||||||||| ||||| |||||||||| Sbjct: 22614 gtgccccatcgacgcgctcaagctcggcgtgtgcg 22580
>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05, complete sequence Length = 142556 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 42 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 76 |||||| ||||||||||| ||||| |||||||||| Sbjct: 89665 gtgccccatcgacgcgctcaagctcggcgtgtgcg 89631
>ref|NM_104930.3| Arabidopsis thaliana lipid binding AT1G62510 mRNA, complete cds Length = 821 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 184 tgcacggcgctcaaggccaacatccttggcatcaacct 221 ||||| ||||||||||| |||||||| || |||||||| Sbjct: 450 tgcactgcgctcaaggctaacatcctcggtatcaacct 487
>ref|XM_479401.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1506 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 159 cgacctggaggcggcggtgtgc 180 |||||||||||||||||||||| Sbjct: 111 cgacctggaggcggcggtgtgc 132
>gb|BT010488.1| Arabidopsis thaliana At1g62510 gene, complete cds Length = 450 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 184 tgcacggcgctcaaggccaacatccttggcatcaacct 221 ||||| ||||||||||| |||||||| || |||||||| Sbjct: 340 tgcactgcgctcaaggctaacatcctcggtatcaacct 377
>dbj|AK221906.1| Arabidopsis thaliana gene, similar to 14KD proline-rich protein DC2.15 precursor (sp|P14009); similar to ESTs emb|Z17709 and emb|Z47685, complete cds, clone: RAFL22-34-F07 Length = 800 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 184 tgcacggcgctcaaggccaacatccttggcatcaacct 221 ||||| ||||||||||| |||||||| || |||||||| Sbjct: 423 tgcactgcgctcaaggctaacatcctcggtatcaacct 460
>dbj|AK221810.1| Arabidopsis thaliana mRNA for similar to 14KD proline-rich protein DC2.15 precursor, complete cds, clone: RAFL21-88-G23 Length = 801 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 184 tgcacggcgctcaaggccaacatccttggcatcaacct 221 ||||| ||||||||||| |||||||| || |||||||| Sbjct: 423 tgcactgcgctcaaggctaacatcctcggtatcaacct 460
>gb|S68113.1| proline-rich SAC51 [Brassica napus=oilseed rape, pods, mRNA, 756 nt] Length = 756 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 184 tgcacggcgctcaaggccaacatccttggcatcaacct 221 ||||| ||||| ||||| ||||||||||| |||||||| Sbjct: 348 tgcaccgcgcttaaggctaacatccttgggatcaacct 385
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 159 cgacctggaggcggcggtgtgc 180 |||||||||||||||||||||| Sbjct: 27635189 cgacctggaggcggcggtgtgc 27635168 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 aggcagcggtggcggtggcgg 23 ||||||||||||||||||||| Sbjct: 11711335 aggcagcggtggcggtggcgg 11711315
>emb|BX817278.1|CNS0ACNX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL10ZC06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 584 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 184 tgcacggcgctcaaggccaacatccttggcatcaacct 221 ||||| ||||||||||| |||||||| || |||||||| Sbjct: 208 tgcactgcgctcaaggctaacatcctcggtatcaacct 245
>dbj|AK220631.1| Arabidopsis thaliana gene, similar to 14KD proline-rich protein DC2.15 precursor (sp|P14009); similar to ESTs emb|Z17709 and emb|Z47685, complete cds, clone: RAFL21-51-F08 Length = 805 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 184 tgcacggcgctcaaggccaacatccttggcatcaacct 221 ||||| ||||||||||| |||||||| || |||||||| Sbjct: 423 tgcactgcgctcaaggctaacatcctcggtatcaacct 460
>gb|AC005698.1|AC005698 Genomic sequence for Arabidopsis thaliana BAC T3P18 from Chromosome 1, complete sequence Length = 97054 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Minus Query: 184 tgcacggcgctcaaggccaacatccttggcatcaacct 221 ||||| ||||||||||| |||||||| || |||||||| Sbjct: 27730 tgcactgcgctcaaggctaacatcctcggtatcaacct 27693
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 159 cgacctggaggcggcggtgtgc 180 |||||||||||||||||||||| Sbjct: 92182 cgacctggaggcggcggtgtgc 92161
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 159 cgacctggaggcggcggtgtgc 180 |||||||||||||||||||||| Sbjct: 14291 cgacctggaggcggcggtgtgc 14270
>emb|X71618.1|BNPRPPDA B.napus proline-rich mRNA accumulating during pod development Length = 756 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 184 tgcacggcgctcaaggccaacatccttggcatcaacct 221 ||||| ||||| ||||| ||||||||||| |||||||| Sbjct: 348 tgcaccgcgcttaaggctaacatccttgggatcaacct 385
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 aggcagcggtggcggtggcgg 23 ||||||||||||||||||||| Sbjct: 3780959 aggcagcggtggcggtggcgg 3780979
>gb|AE010366.1| Methanopyrus kandleri AV19 section 65 of 157 of the complete genome Length = 11173 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 tgcccgatcgacgcgctgaag 63 ||||||||||||||||||||| Sbjct: 2279 tgcccgatcgacgcgctgaag 2299
>ref|XM_481980.1| Oryza sativa (japonica cultivar-group), mRNA Length = 654 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 ctcctcgtcaactactgcggc 264 ||||||||||||||||||||| Sbjct: 97 ctcctcgtcaactactgcggc 117
>ref|XM_483067.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1470 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 63 gctgggcgtgtgcgccaacgtgctc 87 |||| |||||||||||||||||||| Sbjct: 957 gctgcgcgtgtgcgccaacgtgctc 981
>ref|XM_469883.1| Oryza sativa (japonica cultivar-group), mRNA Length = 933 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 224 acgtgcccatcgacctcagcctcctcgtc 252 |||||||||||| ||||| |||||||||| Sbjct: 368 acgtgcccatcggcctcaacctcctcgtc 396
>ref|XM_477592.1| Oryza sativa (japonica cultivar-group), mRNA Length = 270 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 aggcagcggtggcggtggcgg 23 ||||||||||||||||||||| Sbjct: 6 aggcagcggtggcggtggcgg 26
>ref|XM_984882.1| PREDICTED: Mus musculus RIKEN cDNA 2900002G04 gene (2900002G04Rik), mRNA Length = 3854 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 ggcagcggtggcggtggcgga 24 ||||||||||||||||||||| Sbjct: 186 ggcagcggtggcggtggcgga 206
>ref|XM_136135.5| PREDICTED: Mus musculus RIKEN cDNA 2900002G04 gene, transcript variant 1 (2900002G04Rik), mRNA Length = 3854 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 ggcagcggtggcggtggcgga 24 ||||||||||||||||||||| Sbjct: 186 ggcagcggtggcggtggcgga 206
>ref|XM_816339.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053508163.70) partial mRNA Length = 10443 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 ggcagcggtggcggtggcgga 24 ||||||||||||||||||||| Sbjct: 4946 ggcagcggtggcggtggcgga 4926
>emb|AL663114.4| Mouse DNA sequence from clone RP23-269C21 on chromosome 11 Contins the 3' end of the Abca13 gene for ATP-binding cassette sub-family A (ABC1) member 13, complete sequence Length = 96411 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 tgcctgcatgcatgatctaca 397 ||||||||||||||||||||| Sbjct: 58720 tgcctgcatgcatgatctaca 58740
>gb|AC090713.6| Oryza sativa chromosome 3 BAC OSJNBa0002J24 genomic sequence, complete sequence Length = 146022 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 224 acgtgcccatcgacctcagcctcctcgtc 252 |||||||||||| ||||| |||||||||| Sbjct: 113942 acgtgcccatcggcctcaacctcctcgtc 113970
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 ggcggatcaggcgggctcgcg 39 ||||||||||||||||||||| Sbjct: 441672 ggcggatcaggcgggctcgcg 441652
>gb|AE004719.1| Pseudomonas aeruginosa PAO1, section 280 of 529 of the complete genome Length = 10145 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 tcgccgacctggaggcggcgg 175 ||||||||||||||||||||| Sbjct: 2006 tcgccgacctggaggcggcgg 1986
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 ggcacgccgccgaagaagccg 132 ||||||||||||||||||||| Sbjct: 4086842 ggcacgccgccgaagaagccg 4086862
>dbj|AP006344.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0680C01 Length = 145580 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 aggcagcggtggcggtggcgg 23 ||||||||||||||||||||| Sbjct: 69494 aggcagcggtggcggtggcgg 69474
>gb|AC158193.2| Selaginella moellendorffii clone JGIASXY-5P19, complete sequence Length = 29585 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 8 gcggtggcggtggcggatcaggcgg 32 ||||||||||||||||||| ||||| Sbjct: 16501 gcggtggcggtggcggatccggcgg 16477
>dbj|AP005817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_F01 Length = 119248 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 ctcctcgtcaactactgcggc 264 ||||||||||||||||||||| Sbjct: 76876 ctcctcgtcaactactgcggc 76896
>dbj|AP003913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1484_G09 Length = 124695 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 ctcctcgtcaactactgcggc 264 ||||||||||||||||||||| Sbjct: 10522 ctcctcgtcaactactgcggc 10542
>emb|AL672284.15| Mouse DNA sequence from clone RP23-39I7 on chromosome X, complete sequence Length = 227918 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 ggcagcggtggcggtggcgga 24 ||||||||||||||||||||| Sbjct: 11660 ggcagcggtggcggtggcgga 11680
>ref|NM_006690.3| Homo sapiens matrix metallopeptidase 24 (membrane-inserted) (MMP24), mRNA Length = 4344 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ggcagcggtggcggtggcgg 23 |||||||||||||||||||| Sbjct: 189 ggcagcggtggcggtggcgg 208
>gb|AF216218.1| Rattus norvegicus orphanin FQ receptor gene (OFQR), complete cds, alternatively spliced Length = 8372 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 caaggccaacatccttggca 214 |||||||||||||||||||| Sbjct: 6034 caaggccaacatccttggca 6015
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ggtggcggtggcggatcagg 29 |||||||||||||||||||| Sbjct: 1766490 ggtggcggtggcggatcagg 1766509
>gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1008_D08, complete sequence Length = 94286 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 gcagcggtggcggtggcgga 24 |||||||||||||||||||| Sbjct: 11731 gcagcggtggcggtggcgga 11750
>ref|NM_018951.3| Homo sapiens homeobox A10 (HOXA10), transcript variant 1, mRNA Length = 2648 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ggcagcggtggcggtggcgg 23 |||||||||||||||||||| Sbjct: 313 ggcagcggtggcggtggcgg 332
>ref|NM_031569.1| Rattus norvegicus opioid receptor-like 1 (Oprl1), mRNA Length = 2706 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 caaggccaacatccttggca 214 |||||||||||||||||||| Sbjct: 1172 caaggccaacatccttggca 1153
>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0016G07, complete sequence Length = 123167 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 gcagcggtggcggtggcgga 24 |||||||||||||||||||| Sbjct: 78632 gcagcggtggcggtggcgga 78651
>gb|AC092780.6| Oryza sativa chromosome 3 BAC OSJNBb0079B16 genomic sequence, complete sequence Length = 144383 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ggcagcggtggcggtggcgg 23 |||||||||||||||||||| Sbjct: 91134 ggcagcggtggcggtggcgg 91115
>gb|AC146102.2| Pan troglodytes BAC clone RP43-21L13 from 7, complete sequence Length = 191971 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ggcagcggtggcggtggcgg 23 |||||||||||||||||||| Sbjct: 177861 ggcagcggtggcggtggcgg 177842
>ref|XM_808574.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053508283.10) partial mRNA Length = 10365 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ggcagcggtggcggtggcgg 23 |||||||||||||||||||| Sbjct: 4871 ggcagcggtggcggtggcgg 4852
>ref|XM_813798.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053510197.110) partial mRNA Length = 10452 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ggcagcggtggcggtggcgg 23 |||||||||||||||||||| Sbjct: 4946 ggcagcggtggcggtggcgg 4927
>ref|XM_805413.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053508149.10) partial mRNA Length = 7009 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ggcagcggtggcggtggcgg 23 |||||||||||||||||||| Sbjct: 1590 ggcagcggtggcggtggcgg 1571
>gb|AY445095.1| Homo sapiens nitric oxide synthase 1 (neuronal) (NOS1) gene, complete cds Length = 152210 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 tcaaggccaacatccttggc 213 |||||||||||||||||||| Sbjct: 66615 tcaaggccaacatccttggc 66634
>gb|BC047614.1| Homo sapiens matrix metallopeptidase 24 (membrane-inserted), mRNA (cDNA clone IMAGE:5768916), partial cds Length = 4312 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ggcagcggtggcggtggcgg 23 |||||||||||||||||||| Sbjct: 129 ggcagcggtggcggtggcgg 148
>gb|AY152731.1| Rattus norvegicus opioid receptor-like 1 receptor mRNA, complete cds Length = 1104 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 caaggccaacatccttggca 214 |||||||||||||||||||| Sbjct: 1066 caaggccaacatccttggca 1047
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 acctgcagctgggcacgccg 120 |||||||||||||||||||| Sbjct: 4912700 acctgcagctgggcacgccg 4912681
>ref|XM_503036.1| Yarrowia lipolytica CLIB122, YALI0D19536g predicted mRNA Length = 3606 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 gtgcacggcgctcaaggcca 202 |||||||||||||||||||| Sbjct: 348 gtgcacggcgctcaaggcca 367
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gcacgccgccgaagaagccg 132 |||||||||||||||||||| Sbjct: 2355359 gcacgccgccgaagaagccg 2355340
>emb|AL162718.15| Human DNA sequence from clone RP11-274H24 on chromosome 6, complete sequence Length = 178872 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 gccaacatccttggcatcaa 218 |||||||||||||||||||| Sbjct: 152157 gccaacatccttggcatcaa 152138
>emb|AL161727.15| Human DNA sequence from clone RP11-232A1 on chromosome 9 Contains a ribosomal protein S20 (RPS20) pseudogene and a novel pseudogene, complete sequence Length = 160109 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 tgcctgtgcacggcgctcaaggcc 201 |||||||||||||| ||||||||| Sbjct: 141448 tgcctgtgcacggccctcaaggcc 141471
>emb|AL121753.30|HSDJ614O4 Human DNA sequence from clone RP4-614O4 on chromosome 20q11.1-12 Contains the C20orf127 locus for a metallothionein protein pseudogene, the MMP24 gene for matrix metalloproteinase 24 (membrane-inserted), a novel gene, the ITGB4BP gene for integrin beta 4 binding protein, the C20orf120 gene for chromosome 20 open reading frame 120, the C20orf128 gene for chromosome 20 open reading frame 128, the 3' end of the C20orf44 gene for chromosome 20 open reading frame 44 and three CpG islands, complete sequence Length = 150481 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ggcagcggtggcggtggcgg 23 |||||||||||||||||||| Sbjct: 36399 ggcagcggtggcggtggcgg 36418
>emb|X58430.1|HSHOX18 Homo sapiens Hox1.8 gene for homeobox protein Length = 3510 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ggcagcggtggcggtggcgg 23 |||||||||||||||||||| Sbjct: 783 ggcagcggtggcggtggcgg 802
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 ctcgccgacctggaggcggcggtg 177 |||||||||||| ||||||||||| Sbjct: 2831885 ctcgccgacctgaaggcggcggtg 2831908
>emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016O02, complete sequence Length = 167988 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 gtacgtacgtacgcgcatgc 379 |||||||||||||||||||| Sbjct: 44499 gtacgtacgtacgcgcatgc 44518
>emb|AJ243430.1|FRU243430 Fugu rubripes PTPRc gene for CD45, exons 1-30 Length = 12293 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 ccatcgtcgtccactgcagg 344 |||||||||||||||||||| Sbjct: 8617 ccatcgtcgtccactgcagg 8636
>emb|AL646096.8| Mouse DNA sequence from clone RP23-176J13 on chromosome 11 Contains the 5' end of the Scpep1 gene for serine carboxypeptidase 1, two transcription elongation factor B (SIII) polypeptide 2 (Tceb2) pseudogenes, four novel genes (incl. A930013B10Rik), the Coil gene for coilin, the Trim25 gene for tripartite motif protein 25 and the Dgke gene for diacylglycerol kinase epsilon, complete sequence Length = 171512 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 ggcagcggtggcggtggcggatca 27 ||||||||||||||||||| |||| Sbjct: 6417 ggcagcggtggcggtggcgaatca 6394
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 cgatcgacgcgctgaagctgggcg 70 |||||| ||||||||||||||||| Sbjct: 562027 cgatcgccgcgctgaagctgggcg 562004
>gb|AE005912.1| Caulobacter crescentus CB15 section 238 of 359 of the complete genome Length = 10452 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 131 cgtgctgcacgctgatccaggggctcgccgac 162 ||||| ||||||||||||||| ||||| |||| Sbjct: 8282 cgtgcggcacgctgatccaggcgctcgtcgac 8313
>gb|DQ427901.1| Sorghum propinquum locus pHER1A01 genomic sequence Length = 389 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gccgaagaagccgtgctgca 139 |||||||||||||||||||| Sbjct: 165 gccgaagaagccgtgctgca 184
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gctgatccaggggctcgccg 160 |||||||||||||||||||| Sbjct: 2550034 gctgatccaggggctcgccg 2550053
>gb|AY027524.1| Frankia sp. CpI1 plasmid pFQ12, complete plasmid sequence Length = 22437 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 cgccgacctggaggcggcgg 175 |||||||||||||||||||| Sbjct: 2545 cgccgacctggaggcggcgg 2564
>gb|AC004080.2| Homo sapiens PAC clone RP1-170O19 from 7p15-p21, complete sequence Length = 129355 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ggcagcggtggcggtggcgg 23 |||||||||||||||||||| Sbjct: 47394 ggcagcggtggcggtggcgg 47375
>gb|AC161061.2| Pan troglodytes BAC clone CH251-489A6 from chromosome 7, complete sequence Length = 177652 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ggcagcggtggcggtggcgg 23 |||||||||||||||||||| Sbjct: 109915 ggcagcggtggcggtggcgg 109896
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 120 gccgaagaagccgtgctgcacgctgatc 147 |||||||||||||||| ||||||||||| Sbjct: 265990 gccgaagaagccgtgc-gcacgctgatc 265964
>emb|BX677668.10| Zebrafish DNA sequence from clone CH211-141E20 in linkage group 1, complete sequence Length = 182809 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 acaacaagacaagacccaca 323 |||||||||||||||||||| Sbjct: 164517 acaacaagacaagacccaca 164536
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 atactacgtacgtacgtacg 372 |||||||||||||||||||| Sbjct: 3160441 atactacgtacgtacgtacg 3160460
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 gcagcggtggcggtggcgga 24 |||||||||||||||||||| Sbjct: 6707470 gcagcggtggcggtggcgga 6707489
>gb|AC017095.7| Homo sapiens BAC clone RP11-516C4 from 2, complete sequence Length = 183679 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 acatccttggcatcaacctc 222 |||||||||||||||||||| Sbjct: 104977 acatccttggcatcaacctc 104958
>dbj|AP002484.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0489A01 Length = 137174 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 gcgctgaagctgggcgtgtg 74 |||||||||||||||||||| Sbjct: 97729 gcgctgaagctgggcgtgtg 97748
>gb|AE004949.1| Pseudomonas aeruginosa PAO1, section 510 of 529 of the complete genome Length = 11176 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 cacggcgctcaaggccaaca 205 |||||||||||||||||||| Sbjct: 7805 cacggcgctcaaggccaaca 7786
>gb|AE004903.1| Pseudomonas aeruginosa PAO1, section 464 of 529 of the complete genome Length = 12460 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 cgtgctgcacgctgatccag 150 |||||||||||||||||||| Sbjct: 1487 cgtgctgcacgctgatccag 1506
>gb|AC068799.14| Homo sapiens 12 BAC RP11-331O1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170249 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 tcaaggccaacatccttggc 213 |||||||||||||||||||| Sbjct: 86000 tcaaggccaacatccttggc 86019
>ref|XM_226362.3| PREDICTED: Rattus norvegicus ubiquitin specific protease 38 (predicted) (Usp38_predicted), mRNA Length = 3561 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gaggcagcggtggcggtggc 21 |||||||||||||||||||| Sbjct: 191 gaggcagcggtggcggtggc 210
>gb|AC099405.3| Papio anubis clone RP41-161K2, complete sequence Length = 142943 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 ggaggcagcggtggcggtggcgga 24 |||||| ||||||||||||||||| Sbjct: 69751 ggaggcggcggtggcggtggcgga 69728
>gb|AF115267.1| Rattus norvegicus KOR-3A splice variant mRNA, complete cds Length = 1283 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 caaggccaacatccttggca 214 |||||||||||||||||||| Sbjct: 1128 caaggccaacatccttggca 1109
>gb|AC152832.3| Ornithorhynchus anatinus BAC clone OABb-104A1 from chromosome unknown, complete sequence Length = 161382 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 catgatctacaatccatcca 406 |||||||||||||||||||| Sbjct: 30070 catgatctacaatccatcca 30051
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 cgtgctcaacgggctgatca 100 |||||||||||||||||||| Sbjct: 613048 cgtgctcaacgggctgatca 613067
>dbj|AP005892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0011D16 Length = 177329 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 atactacgtacgtacgtacg 372 |||||||||||||||||||| Sbjct: 36754 atactacgtacgtacgtacg 36773
>dbj|AP005727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0038I09 Length = 153520 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 atactacgtacgtacgtacg 372 |||||||||||||||||||| Sbjct: 70104 atactacgtacgtacgtacg 70123
>emb|AJ332393.1|HSA332393 Homo sapiens genomic sequence surrounding NotI site, clone NL4-BN3RS Length = 339 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ggaggcagcggtggcggtgg 20 |||||||||||||||||||| Sbjct: 117 ggaggcagcggtggcggtgg 136
>gb|AF131284.1|AF131284 Homo sapiens membrane type 5 matrix metalloproteinase (MMP24) mRNA, complete cds Length = 2118 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ggcagcggtggcggtggcgg 23 |||||||||||||||||||| Sbjct: 186 ggcagcggtggcggtggcgg 205
>gb|AF106002.1|AF106002 Pseudomonas putida strain GM73 toluene tolerance protein Ttg2A (ttg2A), toluene tolerance protein Ttg2B (ttg2B), toluene tolerance protein Ttg2C (ttg2C), toluene tolerance protein Ttg2D (ttg2D), toluene tolerance protein Ttg2E (ttg2E), toluene tolerance protein Ttg2F (ttg2F), and UDP-N-acetylglucosamine enolpyruvyl transferase homolog (ttg2G) genes, complete cds Length = 5661 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 gtgctcaacgggctgatcaa 101 |||||||||||||||||||| Sbjct: 1954 gtgctcaacgggctgatcaa 1973
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 cgatcgacgcgctgaagctgggcg 70 |||||| ||||||||||||||||| Sbjct: 574146 cgatcgccgcgctgaagctgggcg 574123
>gb|BC013971.2| Homo sapiens homeobox A10, transcript variant 1, mRNA (cDNA clone MGC:12859 IMAGE:4107013), complete cds Length = 2618 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ggcagcggtggcggtggcgg 23 |||||||||||||||||||| Sbjct: 281 ggcagcggtggcggtggcgg 300
>gb|BC007600.1| Homo sapiens homeobox A10, mRNA (cDNA clone IMAGE:3347294), complete cds Length = 1586 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ggcagcggtggcggtggcgg 23 |||||||||||||||||||| Sbjct: 272 ggcagcggtggcggtggcgg 291
>dbj|D16438.1|RATRORC Rattus norvegicus ROR-C mRNA for opioid receptor, complete cds Length = 1817 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 caaggccaacatccttggca 214 |||||||||||||||||||| Sbjct: 1118 caaggccaacatccttggca 1099
>gb|AC134607.5| Mus musculus BAC clone RP23-65J2 from chromosome 9, complete sequence Length = 230480 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ggcagcggtggcggtggcgg 23 |||||||||||||||||||| Sbjct: 122910 ggcagcggtggcggtggcgg 122891
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cgacgcgctgaagctgggcg 70 |||||||||||||||||||| Sbjct: 2187376 cgacgcgctgaagctgggcg 2187357
>gb|L29419.1|RATOPRE Rattus norvegicus opioid receptor mRNA, complete cds Length = 1253 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 caaggccaacatccttggca 214 |||||||||||||||||||| Sbjct: 1201 caaggccaacatccttggca 1182
>gb|L28144.1|RATOPRECEP Rat opioid receptor family mRNA, complete cds Length = 1567 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 caaggccaacatccttggca 214 |||||||||||||||||||| Sbjct: 1238 caaggccaacatccttggca 1219
>gb|AF040714.1|AF040714 Homo sapiens homeobox protein A10 (HOXA10) gene, complete cds Length = 2691 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ggcagcggtggcggtggcgg 23 |||||||||||||||||||| Sbjct: 551 ggcagcggtggcggtggcgg 570
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 gtgcacggcgctcaaggcca 202 |||||||||||||||||||| Sbjct: 2471406 gtgcacggcgctcaaggcca 2471425
>gb|U07871.1|RNU07871 Rattus norvegicus Sprague Dawley G protein-coupled receptor mRNA, complete cds Length = 2354 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 caaggccaacatccttggca 214 |||||||||||||||||||| Sbjct: 1097 caaggccaacatccttggca 1078
>gb|L33916.1|RATXOR1A Rattus norvegicus alternatively spliced orphan opiate receptor (XOR1) mRNA, complete cds Length = 2706 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 caaggccaacatccttggca 214 |||||||||||||||||||| Sbjct: 1172 caaggccaacatccttggca 1153
>gb|AC152975.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0158O07, complete sequence Length = 40515 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ggaggcagcggtggcggtgg 20 |||||||||||||||||||| Sbjct: 39039 ggaggcagcggtggcggtgg 39058
>gb|U01913.1|RNU01913 Rattus norvegicus Sprague Dawley putative opioid receptor mRNA, complete cds Length = 1452 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 caaggccaacatccttggca 214 |||||||||||||||||||| Sbjct: 1247 caaggccaacatccttggca 1228
>dbj|D86074.1| Pinctada fucata mRNA for insoluble protein, complete cds Length = 3331 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ggcggtggcggatcaggcgg 32 |||||||||||||||||||| Sbjct: 2156 ggcggtggcggatcaggcgg 2175
>gb|U05239.1|RNU05239 Rattus norvegicus opioid-receptor-like orphan receptor mRNA, complete cds Length = 1304 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 caaggccaacatccttggca 214 |||||||||||||||||||| Sbjct: 1249 caaggccaacatccttggca 1230
>dbj|AB021227.1| Homo sapiens mRNA for membrane-type-5 matrix metalloproteinase, complete cds Length = 2623 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ggcagcggtggcggtggcgg 23 |||||||||||||||||||| Sbjct: 189 ggcagcggtggcggtggcgg 208 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,200,256 Number of Sequences: 3902068 Number of extensions: 4200256 Number of successful extensions: 87707 Number of sequences better than 10.0: 203 Number of HSP's better than 10.0 without gapping: 213 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 84146 Number of HSP's gapped (non-prelim): 3557 length of query: 501 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 479 effective length of database: 17,147,199,772 effective search space: 8213508690788 effective search space used: 8213508690788 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
