ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags37b19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT016874.1| Zea mays clone Contig707 mRNA sequence 74 4e-10
2gb|BT016861.1| Zea mays clone Contig694 mRNA sequence 74 4e-10
3dbj|AK103990.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 4e-10
4dbj|AK071500.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 4e-10
5dbj|AK059612.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 4e-10
6gb|AY103946.1| Zea mays PCO074099 mRNA sequence 74 4e-10
7gb|AC104280.2| Oryza sativa (japonica cultivar-group) chromosome... 66 1e-07
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
9gb|AY644469.1| Saccharum officinarum mitochondrial 2-oxoglutarat... 58 3e-05
10dbj|D45075.1|PNI2OMTC Panicum miliaceum mRNA for 2-oxoglutarate/... 52 0.002
11emb|AJ311779.1|NTA311779 Nicotiana tabacum partial mRNA for mito... 48 0.025
12dbj|D45074.1|PNI2OMTB Panicum miliaceum mRNA for 2-oxoglutarate/... 46 0.098
13dbj|D45073.1|PNI2OMTA Panicum miliaceum mRNA for 2-oxoglutarate/... 46 0.098
14emb|AJ311778.1|NTA311778 Nicotiana tabacum mRNA for mitochondria... 44 0.39
15gb|AC122283.3| Mus musculus BAC clone RP23-242G6 from chromosome... 42 1.5
16gb|AC139934.9| Mus musculus chromosome 12, clone RP23-39G14, com... 42 1.5
17gb|AC125451.7| Mus musculus chromosome 12, clone RP23-41O6, comp... 42 1.5
18gb|AC044849.12| Homo sapiens chromosome 8, clone RP11-489E7, com... 42 1.5
19emb|BX510646.5| Zebrafish DNA sequence from clone CH211-221B16 i... 42 1.5
20dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
21dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
22gb|AC091230.23| Homo sapiens chromosome 15, clone RP11-414J4, co... 42 1.5
23dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
24dbj|AK120633.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
25gb|AC132383.5| Mus musculus BAC clone RP23-434M19 from 10, compl... 42 1.5
26gb|AC127565.5| Mus musculus BAC clone RP24-292K9 from chromosome... 40 6.1
27gb|AC120406.27| Mus musculus chromosome 12, clone RP24-418L10, c... 40 6.1
28gb|AC145809.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
29gb|AC147358.2| Xenopus tropicalis clone CH216-71J8, complete seq... 40 6.1
30gb|AC093196.2| Drosophila melanogaster clone BACR22H06, complete... 40 6.1
31gb|AC147893.2| Xenopus tropicalis clone CH216-36J13, complete se... 40 6.1
32gb|BC074291.1| Xenopus laevis MGC84082 protein, mRNA (cDNA clone... 40 6.1
33gb|BC075192.1| Xenopus laevis cDNA clone IMAGE:7007980, partial cds 40 6.1
34ref|XM_867954.1| PREDICTED: Bos taurus similar to jumonji domain... 40 6.1
35ref|XM_881052.1| PREDICTED: Bos taurus similar to jumonji domain... 40 6.1
36ref|XM_881032.1| PREDICTED: Bos taurus similar to jumonji domain... 40 6.1
37gb|AC146278.3| Pan troglodytes BAC clone CH251-26J9 from X, comp... 40 6.1
38ref|XM_711207.1| Candida albicans SC5314 hypothetical protein (C... 40 6.1
39gb|AC104880.13| Mus musculus chromosome 12, clone RP23-141H24, c... 40 6.1
40emb|CT009521.5| M.truncatula DNA sequence from clone MTH2-81E13 ... 40 6.1
41ref|XM_531921.2| PREDICTED: Canis familiaris similar to jumonji ... 40 6.1
42gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 6.1
43emb|AL356464.15| Human DNA sequence from clone RP11-38O23 on chr... 40 6.1
44gb|AC083751.6| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.1
45emb|BX005169.18| Zebrafish DNA sequence from clone CH211-81D10 i... 40 6.1
46gb|AC010633.8| Homo sapiens chromosome 5 clone CTD-2317K6, compl... 40 6.1
47gb|AC008964.6|AC008964 Homo sapiens chromosome 5 clone CTD-2360A... 40 6.1
48dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
49dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
50ref|XM_393176.2| PREDICTED: Apis mellifera similar to GA19712-PA... 40 6.1
51gb|AE003626.4| Drosophila melanogaster chromosome 2L, section 35... 40 6.1
52gb|AC174452.2| Mus musculus BAC clone RP23-113E17 from chromosom... 40 6.1
53gb|AC132232.6| Mus musculus BAC clone RP24-489N16 from chromosom... 40 6.1
54gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
55gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
56emb|AL731744.6|CNS08C7T Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.1
57gb|AC005135.1|AC005135 Drosophila melanogaster DNA sequence (P1 ... 40 6.1
58emb|Z98304.1|HS54B20 Human DNA sequence from clone RP1-54B20 on ... 40 6.1 
>gb|BT016874.1| Zea mays clone Contig707 mRNA sequence
          Length = 1051

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                       
Query: 8   catgtcatgatgacgtggctcttcttgaatcaaatccagaagtaccagaagaagatcggc 67
           |||||||||||||| ||| | ||||||||||| ||||||||||   ||||||||||||||
Sbjct: 414 catgtcatgatgacctggatattcttgaatcagatccagaagtttgagaagaagatcggc 355

                
Query: 68  atata 72
           |||||
Sbjct: 354 atata 350
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>gb|BT016861.1| Zea mays clone Contig694 mRNA sequence
          Length = 1412

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                       
Query: 8   catgtcatgatgacgtggctcttcttgaatcaaatccagaagtaccagaagaagatcggc 67
           |||||||||||||| ||| | ||||||||||| ||||||||||   ||||||||||||||
Sbjct: 418 catgtcatgatgacctggatattcttgaatcagatccagaagtttgagaagaagatcggc 359

                
Query: 68  atata 72
           |||||
Sbjct: 358 atata 354
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>dbj|AK103990.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-B11, full
           insert sequence
          Length = 871

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                       
Query: 8   catgtcatgatgacgtggctcttcttgaatcaaatccagaagtaccagaagaagatcggc 67
           ||||| |||||||| ||| | |||||||||||||||||||||| | ||||| |||| || 
Sbjct: 510 catgtgatgatgacatggatattcttgaatcaaatccagaagttcgagaagcagattgga 569

                                
Query: 68  atataagatctccagttggag 88
           ||||||| ||| |||||||||
Sbjct: 570 atataaggtcttcagttggag 590
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>dbj|AK071500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093C11, full
            insert sequence
          Length = 1425

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                        
Query: 8    catgtcatgatgacgtggctcttcttgaatcaaatccagaagtaccagaagaagatcggc 67
            ||||| |||||||| ||| | |||||||||||||||||||||| | ||||| |||| || 
Sbjct: 1063 catgtgatgatgacatggatattcttgaatcaaatccagaagttcgagaagcagattgga 1122

                                 
Query: 68   atataagatctccagttggag 88
            ||||||| ||| |||||||||
Sbjct: 1123 atataaggtcttcagttggag 1143
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>dbj|AK059612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-F09, full
            insert sequence
          Length = 1359

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                        
Query: 8    catgtcatgatgacgtggctcttcttgaatcaaatccagaagtaccagaagaagatcggc 67
            ||||| |||||||| ||| | |||||||||||||||||||||| | ||||| |||| || 
Sbjct: 989  catgtgatgatgacatggatattcttgaatcaaatccagaagttcgagaagcagattgga 1048

                                 
Query: 68   atataagatctccagttggag 88
            ||||||| ||| |||||||||
Sbjct: 1049 atataaggtcttcagttggag 1069
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>gb|AY103946.1| Zea mays PCO074099 mRNA sequence
          Length = 1530

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                        
Query: 8    catgtcatgatgacgtggctcttcttgaatcaaatccagaagtaccagaagaagatcggc 67
            |||||||||||||| ||| | ||||||||||| ||||||||||   ||||||||||||||
Sbjct: 1025 catgtcatgatgacctggatattcttgaatcagatccagaagtttgagaagaagatcggc 1084

                 
Query: 68   atata 72
            |||||
Sbjct: 1085 atata 1089
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>gb|AC104280.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1430_B02,
             complete sequence
          Length = 75456

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Plus

                                                                         
Query: 16    gatgacgtggctcttcttgaatcaaatccagaagtaccagaagaagatcggcatataaga 75
             |||||| ||| | |||||||||||||||||||||| | ||||| |||| || ||||||| 
Sbjct: 53237 gatgacatggatattcttgaatcaaatccagaagttcgagaagcagattggaatataagg 53296

                          
Query: 76    tctccagttggag 88
             ||| |||||||||
Sbjct: 53297 tcttcagttggag 53309
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Plus

                                                                           
Query: 16      gatgacgtggctcttcttgaatcaaatccagaagtaccagaagaagatcggcatataaga 75
               |||||| ||| | |||||||||||||||||||||| | ||||| |||| || ||||||| 
Sbjct: 6615183 gatgacatggatattcttgaatcaaatccagaagttcgagaagcagattggaatataagg 6615242

                            
Query: 76      tctccagttggag 88
               ||| |||||||||
Sbjct: 6615243 tcttcagttggag 6615255
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>gb|AY644469.1| Saccharum officinarum mitochondrial 2-oxoglutarate/malate
            translocator mRNA, complete cds; nuclear gene for
            mitochondrial product
          Length = 1416

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                        
Query: 8    catgtcatgatgacgtggctcttcttgaatcaaatccagaagtaccagaagaagatcggc 67
            |||||||||||||| ||| | ||||||||||| |||||||||    |||||||||| |||
Sbjct: 1027 catgtcatgatgacctggatattcttgaatcagatccagaagattgagaagaagattggc 1086

                 
Query: 68   atata 72
            |||||
Sbjct: 1087 atata 1091
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>dbj|D45075.1|PNI2OMTC Panicum miliaceum mRNA for 2-oxoglutarate/malate translocator,
            complete cds
          Length = 2371

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                          
Query: 5    ccgcatgtcatgatgacgtggctcttcttgaatcaaatccagaagt 50
            |||||||||||| |||| ||| | ||||||||||| ||||||||||
Sbjct: 1996 ccgcatgtcatgttgacctggatattcttgaatcagatccagaagt 2041
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>emb|AJ311779.1|NTA311779 Nicotiana tabacum partial mRNA for mitochondrial
           dicarboxylate/tricarboxylate carrier (dtc4 gene)
          Length = 908

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 2   gccccgcatgtcatgatgacgtggctcttcttgaatcaaatccagaag 49
           ||||| |||||||||||||||||| | ||| | || ||||||||||||
Sbjct: 611 gcccctcatgtcatgatgacgtggatattccttaaccaaatccagaag 658
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>dbj|D45074.1|PNI2OMTB Panicum miliaceum mRNA for 2-oxoglutarate/malate translocator,
            complete cds
          Length = 1783

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 8    catgtcatgatgacgtggctcttcttgaatcaaatccagaagt 50
            ||||||||| |||| ||| | ||||||||||| ||||||||||
Sbjct: 1452 catgtcatgttgacttggatattcttgaatcagatccagaagt 1494
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>dbj|D45073.1|PNI2OMTA Panicum miliaceum mRNA for 2-oxoglutarate/malate translocator,
            complete cds
          Length = 1446

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 8    catgtcatgatgacgtggctcttcttgaatcaaatccagaagt 50
            ||||||||| |||| ||| | ||||||||||| ||||||||||
Sbjct: 979  catgtcatgttgacttggatattcttgaatcagatccagaagt 1021
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>emb|AJ311778.1|NTA311778 Nicotiana tabacum mRNA for mitochondrial
           dicarboxylate/tricarboxylate carrier (dtc3 gene)
          Length = 1144

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 8   catgtcatgatgacgtggctcttcttgaatcaaatccagaag 49
           |||||||||||||||||| | ||| | || ||||||||||||
Sbjct: 862 catgtcatgatgacgtggatattccttaaccaaatccagaag 903
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>gb|AC122283.3| Mus musculus BAC clone RP23-242G6 from chromosome 10, complete sequence
          Length = 184346

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 291    gggcacagccatgagacacta 311
              |||||||||||||||||||||
Sbjct: 171961 gggcacagccatgagacacta 171941
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>gb|AC139934.9| Mus musculus chromosome 12, clone RP23-39G14, complete sequence
          Length = 312488

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 221   ttacaataatcacataatcac 241
             |||||||||||||||||||||
Sbjct: 23848 ttacaataatcacataatcac 23828
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>gb|AC125451.7| Mus musculus chromosome 12, clone RP23-41O6, complete sequence
          Length = 236838

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 221    ttacaataatcacataatcac 241
              |||||||||||||||||||||
Sbjct: 121213 ttacaataatcacataatcac 121233
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>gb|AC044849.12| Homo sapiens chromosome 8, clone RP11-489E7, complete sequence
          Length = 149301

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 278   acttctgttggctgggcacag 298
             |||||||||||||||||||||
Sbjct: 93779 acttctgttggctgggcacag 93799
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>emb|BX510646.5| Zebrafish DNA sequence from clone CH211-221B16 in linkage group 9,
             complete sequence
          Length = 200321

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 223   acaataatcacataatcacat 243
             |||||||||||||||||||||
Sbjct: 80013 acaataatcacataatcacat 79993
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 235      taatcacattatttgttgtaa 255
                |||||||||||||||||||||
Sbjct: 41482699 taatcacattatttgttgtaa 41482719
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>dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0614D08
          Length = 147548

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 235   taatcacattatttgttgtaa 255
             |||||||||||||||||||||
Sbjct: 38992 taatcacattatttgttgtaa 39012
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>gb|AC091230.23| Homo sapiens chromosome 15, clone RP11-414J4, complete sequence
          Length = 206482

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 153    tttttggtagacagagtttta 173
              |||||||||||||||||||||
Sbjct: 161098 tttttggtagacagagtttta 161118
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>dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0660F12
          Length = 147203

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 235   taatcacattatttgttgtaa 255
             |||||||||||||||||||||
Sbjct: 50898 taatcacattatttgttgtaa 50918
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>dbj|AK120633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153I18, full
            insert sequence
          Length = 5246

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 235  taatcacattatttgttgtaa 255
            |||||||||||||||||||||
Sbjct: 2145 taatcacattatttgttgtaa 2125
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>gb|AC132383.5| Mus musculus BAC clone RP23-434M19 from 10, complete sequence
          Length = 212242

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 291   gggcacagccatgagacacta 311
             |||||||||||||||||||||
Sbjct: 12441 gggcacagccatgagacacta 12421
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>gb|AC127565.5| Mus musculus BAC clone RP24-292K9 from chromosome 7, complete sequence
          Length = 188650

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   ataatcacataatcacatta 245
             ||||||||||||||||||||
Sbjct: 26858 ataatcacataatcacatta 26877
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>gb|AC120406.27| Mus musculus chromosome 12, clone RP24-418L10, complete sequence
          Length = 198624

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   gttgtttttggtagacagag 168
             ||||||||||||||||||||
Sbjct: 67500 gttgtttttggtagacagag 67519
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>gb|AC145809.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0023E20, complete sequence
          Length = 130827

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   aatcacattatttgttgtaa 255
             ||||||||||||||||||||
Sbjct: 48350 aatcacattatttgttgtaa 48331
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>gb|AC147358.2| Xenopus tropicalis clone CH216-71J8, complete sequence
          Length = 170238

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 222    tacaataatcacataatcacatta 245
              |||||||||||||| |||||||||
Sbjct: 116419 tacaataatcacatcatcacatta 116396
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>gb|AC093196.2| Drosophila melanogaster clone BACR22H06, complete sequence
          Length = 173008

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 419   taaattggaaatgttgtact 438
             ||||||||||||||||||||
Sbjct: 90618 taaattggaaatgttgtact 90637
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>gb|AC147893.2| Xenopus tropicalis clone CH216-36J13, complete sequence
          Length = 159658

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 222    tacaataatcacataatcacatta 245
              |||||||||||||| |||||||||
Sbjct: 134568 tacaataatcacatcatcacatta 134591
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>gb|BC074291.1| Xenopus laevis MGC84082 protein, mRNA (cDNA clone MGC:84082
            IMAGE:6949291), complete cds
          Length = 2245

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 219  tgttacaataatcacataatcacattat 246
            ||||| ||||||||||| ||||||||||
Sbjct: 1688 tgttataataatcacattatcacattat 1661
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>gb|BC075192.1| Xenopus laevis cDNA clone IMAGE:7007980, partial cds
          Length = 863

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 39  aaatccagaagtaccagaag 58
           ||||||||||||||||||||
Sbjct: 409 aaatccagaagtaccagaag 390
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>ref|XM_867954.1| PREDICTED: Bos taurus similar to jumonji domain containing 1B,
            transcript variant 1 (LOC534005), mRNA
          Length = 6330

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 124  tttcagcagctttgcatctc 143
            ||||||||||||||||||||
Sbjct: 1637 tttcagcagctttgcatctc 1656
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>ref|XM_881052.1| PREDICTED: Bos taurus similar to jumonji domain containing 1B,
           transcript variant 3 (LOC534005), mRNA
          Length = 5013

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 124 tttcagcagctttgcatctc 143
           ||||||||||||||||||||
Sbjct: 369 tttcagcagctttgcatctc 388
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>ref|XM_881032.1| PREDICTED: Bos taurus similar to jumonji domain containing 1B,
           transcript variant 2 (LOC534005), mRNA
          Length = 4872

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 124 tttcagcagctttgcatctc 143
           ||||||||||||||||||||
Sbjct: 369 tttcagcagctttgcatctc 388
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>gb|AC146278.3| Pan troglodytes BAC clone CH251-26J9 from X, complete sequence
          Length = 199900

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 232   acataatcacattatttgttgtaa 255
             ||||||||||||| ||||||||||
Sbjct: 45297 acataatcacattttttgttgtaa 45274
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>ref|XM_711207.1| Candida albicans SC5314 hypothetical protein (CaO19_5231), mRNA
          Length = 1236

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 242 attatttgttgtaattgggg 261
           ||||||||||||||||||||
Sbjct: 189 attatttgttgtaattgggg 170
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>gb|AC104880.13| Mus musculus chromosome 12, clone RP23-141H24, complete sequence
          Length = 206848

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   gttgtttttggtagacagag 168
             ||||||||||||||||||||
Sbjct: 28094 gttgtttttggtagacagag 28075
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>emb|CT009521.5| M.truncatula DNA sequence from clone MTH2-81E13 on chromosome 3,
             complete sequence
          Length = 56728

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 221   ttacaataatcacataatcacattattt 248
             |||||||| || ||||||||||||||||
Sbjct: 25219 ttacaatactctcataatcacattattt 25246
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>ref|XM_531921.2| PREDICTED: Canis familiaris similar to jumonji domain containing 1B
            (LOC474695), mRNA
          Length = 6117

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 124  tttcagcagctttgcatctc 143
            ||||||||||||||||||||
Sbjct: 1713 tttcagcagctttgcatctc 1732
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 327     cttgtgccatctggtcttgt 346
               ||||||||||||||||||||
Sbjct: 1135040 cttgtgccatctggtcttgt 1135059
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>emb|AL356464.15| Human DNA sequence from clone RP11-38O23 on chromosome Xp11.23-11.4
             Contains the 3'end of the SSX6 gene for synovial sarcoma X
             breakpoint 6, a novel gene similar to lysozyme C
             (1,4-beta-N-acetylmuramidase), a zinc finger protein 21
             (ZNF21) pseudogene, an ornithine aminotransferase (gyrate
             atrophy) (OAT) pseudogene, a SSX2 pseudogene (psiSSX2), a
             S100 calcium binding protein A11 (calgizzarin)(S100A11)
             pseudogene, the 5'end of the SSX5 gene for synovial
             sarcoma X breakpoint 5 and one CpG island, complete
             sequence
          Length = 73851

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 232   acataatcacattatttgttgtaa 255
             ||||||||||||| ||||||||||
Sbjct: 26549 acataatcacattttttgttgtaa 26572
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>gb|AC083751.6| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0042K08, from chromosome 2, complete sequence
          Length = 164628

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    aatcacattatttgttgtaa 255
              ||||||||||||||||||||
Sbjct: 124483 aatcacattatttgttgtaa 124464
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>emb|BX005169.18| Zebrafish DNA sequence from clone CH211-81D10 in linkage group 14,
             complete sequence
          Length = 164868

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   aatcacataatcacattatt 247
             ||||||||||||||||||||
Sbjct: 12170 aatcacataatcacattatt 12151
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>gb|AC010633.8| Homo sapiens chromosome 5 clone CTD-2317K6, complete sequence
          Length = 195931

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 408    atagcctaaaataaattgga 427
              ||||||||||||||||||||
Sbjct: 157335 atagcctaaaataaattgga 157354
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>gb|AC008964.6|AC008964 Homo sapiens chromosome 5 clone CTD-2360A17, complete sequence
          Length = 143841

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 408   atagcctaaaataaattgga 427
             ||||||||||||||||||||
Sbjct: 70382 atagcctaaaataaattgga 70401
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 236     aatcacattatttgttgtaa 255
               ||||||||||||||||||||
Sbjct: 9307138 aatcacattatttgttgtaa 9307157
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 236     aatcacattatttgttgtaa 255
               ||||||||||||||||||||
Sbjct: 7314819 aatcacattatttgttgtaa 7314838
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>ref|XM_393176.2| PREDICTED: Apis mellifera similar to GA19712-PA (LOC409678), mRNA
          Length = 4497

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 44   cagaagtaccagaagaagat 63
            ||||||||||||||||||||
Sbjct: 2001 cagaagtaccagaagaagat 2020
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>gb|AE003626.4| Drosophila melanogaster chromosome 2L, section 35 of 83 of the complete
              sequence
          Length = 264919

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 419    taaattggaaatgttgtact 438
              ||||||||||||||||||||
Sbjct: 165707 taaattggaaatgttgtact 165726
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>gb|AC174452.2| Mus musculus BAC clone RP23-113E17 from chromosome 10, complete
             sequence
          Length = 229159

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   aaaataaattggaaatgttg 434
             ||||||||||||||||||||
Sbjct: 89041 aaaataaattggaaatgttg 89022
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>gb|AC132232.6| Mus musculus BAC clone RP24-489N16 from chromosome 10, complete sequence
          Length = 166451

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 415    aaaataaattggaaatgttg 434
              ||||||||||||||||||||
Sbjct: 135565 aaaataaattggaaatgttg 135546
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 236     aatcacattatttgttgtaa 255
               ||||||||||||||||||||
Sbjct: 7384905 aatcacattatttgttgtaa 7384924
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 236     aatcacattatttgttgtaa 255
               ||||||||||||||||||||
Sbjct: 9307023 aatcacattatttgttgtaa 9307042
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>emb|AL731744.6|CNS08C7T Oryza sativa chromosome 12, . BAC OSJNBa0026C14 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 190718

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    aatcacattatttgttgtaa 255
              ||||||||||||||||||||
Sbjct: 131917 aatcacattatttgttgtaa 131898
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>gb|AC005135.1|AC005135 Drosophila melanogaster DNA sequence (P1 DS07070 (D331)), complete
             sequence
          Length = 67297

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 419   taaattggaaatgttgtact 438
             ||||||||||||||||||||
Sbjct: 17253 taaattggaaatgttgtact 17272
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>emb|Z98304.1|HS54B20 Human DNA sequence from clone RP1-54B20 on chromosome Xp11.1-11.3
             Contains the 5' end of the SSX6 gene for synovial sarcoma
             X breakpoint 6, two novel genes similar to a C2H2 type
             zinc finger protein, a novel gene, a novel gene similar to
             lysozyme C (1,4-beta-N-acetylmuramidase), the ZNF81 gene
             for zinc finger protein 81 (HFZ20) and three CpG islands,
             complete sequence
          Length = 209618

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 232   acataatcacattatttgttgtaa 255
             ||||||||||||| ||||||||||
Sbjct: 12286 acataatcacattttttgttgtaa 12309


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,349,959
Number of Sequences: 3902068
Number of extensions: 4349959
Number of successful extensions: 84123
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83864
Number of HSP's gapped (non-prelim): 259
length of query: 450
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 428
effective length of database: 17,147,199,772
effective search space: 7339001502416
effective search space used: 7339001502416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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