ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags36m11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104181.1| Zea mays PCO060230 mRNA sequence 214 6e-53
2gb|BT017181.1| Zea mays clone EL01N0369E04.c mRNA sequence 208 4e-51
3dbj|AK104965.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 4e-48
4dbj|AK073729.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 4e-48
5gb|BT016303.1| Zea mays clone Contig136 mRNA sequence 182 2e-43
6gb|AY103581.1| Zea mays PCO136340 mRNA sequence 182 2e-43
7gb|DQ160040.1| Taraxacum officinale TO38-23 (To38-23) mRNA, part... 145 5e-32
8ref|NM_115116.3| Arabidopsis thaliana ubiquitin conjugating enzy... 137 1e-29
9gb|AY072492.1| Arabidopsis thaliana unknown protein mRNA, comple... 137 1e-29
10gb|AY042846.1| Arabidopsis thaliana Unknown protein mRNA, comple... 137 1e-29
11emb|BX825709.1|CNS0A69P Arabidopsis thaliana Full-length cDNA Co... 137 1e-29
12dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 131 7e-28
13dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic D... 131 7e-28
14dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic D... 131 7e-28
15ref|NM_129165.2| Arabidopsis thaliana ubiquitin conjugating enzy... 129 3e-27
16gb|AY093382.1| Arabidopsis thaliana putative ubiquitin-conjugati... 129 3e-27
17gb|AY062760.1| Arabidopsis thaliana putative ubiquitin-conjugati... 129 3e-27
18gb|AY089084.1| Arabidopsis thaliana clone 29951 mRNA, complete s... 129 3e-27
19gb|AY085609.1| Arabidopsis thaliana clone 16125 mRNA, complete s... 129 3e-27
20gb|AC150979.15| Medicago truncatula clone mth2-115a17, complete ... 125 4e-26
21gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete se... 125 4e-26
22gb|DQ235194.1| Solanum tuberosum clone 168B03 ubiquitin-conjugat... 123 2e-25
23ref|XM_469523.1| Oryza sativa (japonica cultivar-group), mRNA 123 2e-25
24gb|DQ191643.1| Solanum tuberosum ubiquitin-conjugating enzyme fa... 123 2e-25
25dbj|AK120951.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 2e-25
26dbj|AK068060.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 3e-24
27gb|AY107839.1| Zea mays PCO143146 mRNA sequence 119 3e-24
28dbj|AP004536.1| Lotus japonicus genomic DNA, chromosome 4, clone... 119 3e-24
29gb|DQ160024.1| Taraxacum officinale TO25-123 (To25-123) mRNA, pa... 117 1e-23
30ref|NM_180353.1| Arabidopsis thaliana ubiquitin conjugating enzy... 115 4e-23
31gb|AY587772.1| Tamarix androssowii ubiquitin-conjugating enzyme ... 115 4e-23
32gb|DQ097727.1| Arachis hypogaea ubiquitin-conjugating enzyme 2 m... 115 4e-23
33emb|AL353912.1|ATF3C22 Arabidopsis thaliana DNA chromosome 3, BA... 111 7e-22
34emb|AL050300.2|ATF22O6 Arabidopsis thaliana DNA chromosome 3, BA... 111 7e-22
35ref|NM_179928.1| Arabidopsis thaliana ubiquitin conjugating enzy... 107 1e-20
36gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 103 2e-19
37gb|AC007017.4| Arabidopsis thaliana chromosome 2 clone F11F19 ma... 103 2e-19
38dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 103 2e-19
39gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033... 103 2e-19
40ref|NM_102175.2| Arabidopsis thaliana ubiquitin conjugating enzy... 101 6e-19
41gb|AY093340.1| Arabidopsis thaliana similar to DNA binding prote... 101 6e-19
42gb|AY059896.1| Arabidopsis thaliana similar to DNA binding prote... 101 6e-19
43gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana... 100 2e-18
44gb|AF051209.1|AF051209 Picea mariana CROC-1-like protein (Sb13) ... 100 2e-18
45gb|BT013203.1| Lycopersicon esculentum clone 134376R, mRNA sequence 96 4e-17
46dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 92 6e-16
47gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 92 6e-16
48emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa... 92 6e-16
49ref|NM_105734.2| Arabidopsis thaliana ubiquitin conjugating enzy... 78 9e-12
50gb|BT004943.1| Arabidopsis thaliana clone U20398 putative E2, ub... 78 9e-12
51gb|BT004011.1| Arabidopsis thaliana clone RAFL14-86-C24 (R20398)... 78 9e-12
52gb|AY088344.1| Arabidopsis thaliana clone 5821 mRNA, complete se... 78 9e-12
53gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A... 70 2e-09
54ref|XM_474414.1| Oryza sativa (japonica cultivar-group), predic... 46 0.032
55dbj|AK066799.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.032
56gb|DQ267678.1| Tricholoma vaccinum isolate GK6514 ubiquitin-conj... 46 0.032
57dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.13
58emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 44 0.13
59emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4,... 44 0.13
60gb|AC037197.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.0
61ref|XM_422845.1| PREDICTED: Gallus gallus similar to KIAA0669 ge... 40 2.0
62gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 40 2.0
63gb|AC104322.4| Oryza sativa chromosome 10 BAC OSJNBb0005F01 geno... 40 2.0
64dbj|AB224400.1| Aspergillus oryzae cDNA, contig sequence: AoEST1245 40 2.0
65dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 40 2.0
66gb|AY062935.1| Chlamydomonas reinhardtii ubiquitin-conjugating e... 40 2.0
67dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
68gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 2.0
69emb|AL772211.7| Mouse DNA sequence from clone RP23-473B24 on chr... 40 2.0
70ref|NM_121805.2| Arabidopsis thaliana DNA binding / transcriptio... 38 7.9
71gb|CP000114.1| Streptococcus agalactiae A909, complete genome 38 7.9
72gb|AC147876.1| Homo sapiens BAC clone RP11-718M20 from 4, comple... 38 7.9
73gb|AE014216.1| Streptococcus agalactiae 2603V/R section 26 of 10... 38 7.9
74gb|AC151992.3| Mus musculus BAC clone RP23-212H13 from chromosom... 38 7.9
75emb|AL766846.1|SAG766846 Streptococcus agalactiae NEM316 complet... 38 7.9
76emb|BX914223.9| Zebrafish DNA sequence from clone DKEY-98M24 in ... 38 7.9
77gb|AC023705.4| Drosophila melanogaster X BAC RP98-7L6 (Roswell P... 38 7.9
78gb|AC009987.17| Homo sapiens chromosome 10 clone RP11-391M7, com... 38 7.9
79gb|AC026393.11| Homo sapiens chromosome 10 clone RP11-308N23, co... 38 7.9
80gb|AY265063.1| HIV-1 isolate 98CM1583 from Cameroon nef protein ... 38 7.9
81gb|AC156447.2| Volvox carteri clone JGIAOBO-33C7, complete sequence 38 7.9
82gb|AC066613.7|AC066613 Homo sapiens chromosome 15 clone RP11-707... 38 7.9
83gb|AY803437.1| HIV-1 isolate 03-9270NM from Uganda nef protein (... 38 7.9
84dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
85gb|AC020891.8|AC020891 Homo sapiens chromosome 15 clone RP11-108... 38 7.9
86dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
87dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
88dbj|AB015473.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 38 7.9
89emb|CR387997.18| Zebrafish DNA sequence from clone DKEY-13E3 in ... 38 7.9
90gb|AE003449.2| Drosophila melanogaster chromosome X, section 33 ... 38 7.9 
>gb|AY104181.1| Zea mays PCO060230 mRNA sequence
          Length = 1061

 Score =  214 bits (108), Expect = 6e-53
 Identities = 149/163 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
           |||| ||||| || |||||||||||||| ||||| || || |||||||||||||||||||
Sbjct: 333 agctcgagcgtggagagaagggcattggtgatgggacagtgagctatggaatggatgatg 392

                                                                       
Query: 61  ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtcc 120
           |||||||||| |||||||||||||||||||| ||||| ||||| |||||||||||||| |
Sbjct: 393 ctgatgacatctacatgcggtcatggactggtaccatcattggccctcacaatactgtac 452

                                                      
Query: 121 atgagggtcgcatctaccagctgnagctgttttgtgacaagga 163
           ||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 453 atgagggtcgcatctaccagctgaagttgttttgtgacaagga 495
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>gb|BT017181.1| Zea mays clone EL01N0369E04.c mRNA sequence
          Length = 822

 Score =  208 bits (105), Expect = 4e-51
 Identities = 146/160 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
           |||| ||||| || |||||||||||||| ||||| || || |||||||||||||||||||
Sbjct: 214 agctcgagcgtggagagaagggcattggtgatgggacagtgagctatggaatggatgatg 273

                                                                       
Query: 61  ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtcc 120
           |||||||||| |||||||||||||||||||| ||||| ||||| |||||||||||||| |
Sbjct: 274 ctgatgacatctacatgcggtcatggactggtaccatcattggccctcacaatactgtac 333

                                                   
Query: 121 atgagggtcgcatctaccagctgnagctgttttgtgacaa 160
           ||||||||||||||||||||||| || |||||||||||||
Sbjct: 334 atgagggtcgcatctaccagctgaagttgttttgtgacaa 373
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>dbj|AK104965.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-C07, full
           insert sequence
          Length = 833

 Score =  198 bits (100), Expect = 4e-48
 Identities = 147/163 (90%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
           ||||||| || || || |||||||||||||||||||| || |||||||||||||||||||
Sbjct: 126 agcttgaacgtggtgaaaagggcattggagatggaaccgtgagctatggaatggatgatg 185

                                                                       
Query: 61  ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtcc 120
           | |||||||| ||||||||||| |||||||||||||| |||||||| || |||| |||||
Sbjct: 186 cagatgacatctacatgcggtcttggactggcaccatcattggtccacataatagtgtcc 245

                                                      
Query: 121 atgagggtcgcatctaccagctgnagctgttttgtgacaagga 163
           |||| |||||||||||||||||| ||||||| |||||||||||
Sbjct: 246 atgaaggtcgcatctaccagctgaagctgttctgtgacaagga 288
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>dbj|AK073729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033054B21, full
           insert sequence
          Length = 853

 Score =  198 bits (100), Expect = 4e-48
 Identities = 147/163 (90%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
           ||||||| || || || |||||||||||||||||||| || |||||||||||||||||||
Sbjct: 177 agcttgaacgtggtgaaaagggcattggagatggaaccgtgagctatggaatggatgatg 236

                                                                       
Query: 61  ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtcc 120
           | |||||||| ||||||||||| |||||||||||||| |||||||| || |||| |||||
Sbjct: 237 cagatgacatctacatgcggtcttggactggcaccatcattggtccacataatagtgtcc 296

                                                      
Query: 121 atgagggtcgcatctaccagctgnagctgttttgtgacaagga 163
           |||| |||||||||||||||||| ||||||| |||||||||||
Sbjct: 297 atgaaggtcgcatctaccagctgaagctgttctgtgacaagga 339
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>gb|BT016303.1| Zea mays clone Contig136 mRNA sequence
          Length = 790

 Score =  182 bits (92), Expect = 2e-43
 Identities = 145/163 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
           ||||||| || || |||||||||||||||||||| || || ||||||||||||||||| |
Sbjct: 141 agcttgaacgtggagagaagggcattggagatgggacagtgagctatggaatggatgacg 200

                                                                       
Query: 61  ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtcc 120
           | |||||||| |||||||| |||||||||||||| |||||||| ||||| ||||| ||||
Sbjct: 201 cagatgacatctacatgcgatcatggactggcactattattggccctcataataccgtcc 260

                                                      
Query: 121 atgagggtcgcatctaccagctgnagctgttttgtgacaagga 163
           ||||||||||||||||||||||| || |||| || ||||||||
Sbjct: 261 atgagggtcgcatctaccagctgaagttgttctgcgacaagga 303
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>gb|AY103581.1| Zea mays PCO136340 mRNA sequence
          Length = 1242

 Score =  182 bits (92), Expect = 2e-43
 Identities = 145/163 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
           ||||||| || || |||||||||||||||||||| || || ||||||||||||||||| |
Sbjct: 227 agcttgaacgtggagagaagggcattggagatgggacagtgagctatggaatggatgacg 286

                                                                       
Query: 61  ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtcc 120
           | |||||||| |||||||| |||||||||||||| |||||||| ||||| ||||| ||||
Sbjct: 287 cagatgacatctacatgcgatcatggactggcactattattggccctcataataccgtcc 346

                                                      
Query: 121 atgagggtcgcatctaccagctgnagctgttttgtgacaagga 163
           ||||||||||||||||||||||| || |||| || ||||||||
Sbjct: 347 atgagggtcgcatctaccagctgaagttgttctgcgacaagga 389
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>gb|DQ160040.1| Taraxacum officinale TO38-23 (To38-23) mRNA, partial cds
          Length = 475

 Score =  145 bits (73), Expect = 5e-32
 Identities = 138/160 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
           |||||||||| || || ||||| || |||||||| ||||| |||||||||||||||||||
Sbjct: 40  agcttgagcgtggagaaaagggtatcggagatggcactgtgagctatggaatggatgatg 99

                                                                       
Query: 61  ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtcc 120
            |||||| || || ||||| |||||||| |||||||| || || ||||||||| |||| |
Sbjct: 100 gtgatgatatctatatgcgatcatggacaggcaccatcatcggccctcacaattctgtgc 159

                                                   
Query: 121 atgagggtcgcatctaccagctgnagctgttttgtgacaa 160
           |||||||||||||||||||  || |||| |||||||||||
Sbjct: 160 atgagggtcgcatctaccaattgaagctattttgtgacaa 199
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>ref|NM_115116.3| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT3G52560 transcript variant
           AT3G52560.1 mRNA, complete cds
          Length = 864

 Score =  137 bits (69), Expect = 1e-29
 Identities = 137/160 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
           ||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||||
Sbjct: 188 agcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgatg 247

                                                                       
Query: 61  ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtcc 120
             |||||||| || ||||| || |||||||||||||| || ||||||||||| ||||| |
Sbjct: 248 gagatgacatctatatgcgttcttggactggcaccatcatcggtcctcacaacactgttc 307

                                                   
Query: 121 atgagggtcgcatctaccagctgnagctgttttgtgacaa 160
           |||| ||| | ||||| ||| || |||| |||||||||||
Sbjct: 308 atgaaggtagaatctatcagttgaagctcttttgtgacaa 347
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>gb|AY072492.1| Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 587

 Score =  137 bits (69), Expect = 1e-29
 Identities = 137/160 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
           ||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||||
Sbjct: 62  agcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgatg 121

                                                                       
Query: 61  ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtcc 120
             |||||||| || ||||| || |||||||||||||| || ||||||||||| ||||| |
Sbjct: 122 gagatgacatctatatgcgttcttggactggcaccatcatcggtcctcacaacactgttc 181

                                                   
Query: 121 atgagggtcgcatctaccagctgnagctgttttgtgacaa 160
           |||| ||| | ||||| ||| || |||| |||||||||||
Sbjct: 182 atgaaggtagaatctatcagttgaagctcttttgtgacaa 221
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>gb|AY042846.1| Arabidopsis thaliana Unknown protein mRNA, complete cds
          Length = 810

 Score =  137 bits (69), Expect = 1e-29
 Identities = 137/160 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
           ||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||||
Sbjct: 137 agcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgatg 196

                                                                       
Query: 61  ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtcc 120
             |||||||| || ||||| || |||||||||||||| || ||||||||||| ||||| |
Sbjct: 197 gagatgacatctatatgcgttcttggactggcaccatcatcggtcctcacaacactgttc 256

                                                   
Query: 121 atgagggtcgcatctaccagctgnagctgttttgtgacaa 160
           |||| ||| | ||||| ||| || |||| |||||||||||
Sbjct: 257 atgaaggtagaatctatcagttgaagctcttttgtgacaa 296
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>emb|BX825709.1|CNS0A69P Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL58ZC12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 838

 Score =  137 bits (69), Expect = 1e-29
 Identities = 137/160 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
           ||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||||
Sbjct: 163 agcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgatg 222

                                                                       
Query: 61  ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtcc 120
             |||||||| || ||||| || |||||||||||||| || ||||||||||| ||||| |
Sbjct: 223 gagatgacatctatatgcgttcttggactggcaccatcatcggtcctcacaacactgttc 282

                                                   
Query: 121 atgagggtcgcatctaccagctgnagctgttttgtgacaa 160
           |||| ||| | ||||| ||| || |||| |||||||||||
Sbjct: 283 atgaaggtagaatctatcagttgaagctcttttgtgacaa 322
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  131 bits (66), Expect = 7e-28
 Identities = 96/106 (90%)
 Strand = Plus / Minus

                                                                           
Query: 1       agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
               ||||||| || || || |||||||||||||||||||| || |||||||||||||||||||
Sbjct: 7152180 agcttgaacgtggtgaaaagggcattggagatggaaccgtgagctatggaatggatgatg 7152121

                                                             
Query: 61      ctgatgacatatacatgcggtcatggactggcaccattattggtcc 106
               | |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 7152120 cagatgacatctacatgcggtcttggactggcaccatcattggtcc 7152075



 Score = 73.8 bits (37), Expect = 1e-10
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                               
Query: 116     tgtccatgagggtcgcatctaccagctgnagctgttttgtgacaagga 163
               ||||||||| |||||||||||||||||| ||||||| |||||||||||
Sbjct: 7151655 tgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaagga 7151608
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>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OJ1381_H04
          Length = 130961

 Score =  131 bits (66), Expect = 7e-28
 Identities = 96/106 (90%)
 Strand = Plus / Minus

                                                                        
Query: 1    agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
            ||||||| || || || |||||||||||||||||||| || |||||||||||||||||||
Sbjct: 4285 agcttgaacgtggtgaaaagggcattggagatggaaccgtgagctatggaatggatgatg 4226

                                                          
Query: 61   ctgatgacatatacatgcggtcatggactggcaccattattggtcc 106
            | |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 4225 cagatgacatctacatgcggtcttggactggcaccatcattggtcc 4180



 Score = 73.8 bits (37), Expect = 1e-10
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                            
Query: 116  tgtccatgagggtcgcatctaccagctgnagctgttttgtgacaagga 163
            ||||||||| |||||||||||||||||| ||||||| |||||||||||
Sbjct: 3760 tgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaagga 3713
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>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0592C05
          Length = 150478

 Score =  131 bits (66), Expect = 7e-28
 Identities = 96/106 (90%)
 Strand = Plus / Minus

                                                                          
Query: 1      agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
              ||||||| || || || |||||||||||||||||||| || |||||||||||||||||||
Sbjct: 104259 agcttgaacgtggtgaaaagggcattggagatggaaccgtgagctatggaatggatgatg 104200

                                                            
Query: 61     ctgatgacatatacatgcggtcatggactggcaccattattggtcc 106
              | |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 104199 cagatgacatctacatgcggtcttggactggcaccatcattggtcc 104154



 Score = 73.8 bits (37), Expect = 1e-10
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                              
Query: 116    tgtccatgagggtcgcatctaccagctgnagctgttttgtgacaagga 163
              ||||||||| |||||||||||||||||| ||||||| |||||||||||
Sbjct: 103734 tgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaagga 103687
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>ref|NM_129165.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT2G36060 transcript variant
           AT2G36060.1 mRNA, complete cds
          Length = 837

 Score =  129 bits (65), Expect = 3e-27
 Identities = 136/160 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
           ||||||| || || ||||| || ||||||||||||||||| |||||||||||||||||||
Sbjct: 243 agcttgaacgtggagagaaaggtattggagatggaactgtgagctatggaatggatgatg 302

                                                                       
Query: 61  ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtcc 120
             |||||||| || ||||| || ||||||||||| || || ||||||||||| ||||| |
Sbjct: 303 gagatgacatttatatgcgctcttggactggcactatcatcggtcctcacaacactgtac 362

                                                   
Query: 121 atgagggtcgcatctaccagctgnagctgttttgtgacaa 160
           |||||||||| || || ||| || |||| || ||||||||
Sbjct: 363 atgagggtcggatttatcagttgaagctcttctgtgacaa 402
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>gb|AY093382.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme
           (At2g36060) mRNA, complete cds
          Length = 531

 Score =  129 bits (65), Expect = 3e-27
 Identities = 136/160 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
           ||||||| || || ||||| || ||||||||||||||||| |||||||||||||||||||
Sbjct: 59  agcttgaacgtggagagaaaggtattggagatggaactgtgagctatggaatggatgatg 118

                                                                       
Query: 61  ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtcc 120
             |||||||| || ||||| || ||||||||||| || || ||||||||||| ||||| |
Sbjct: 119 gagatgacatttatatgcgctcttggactggcactatcatcggtcctcacaacactgtac 178

                                                   
Query: 121 atgagggtcgcatctaccagctgnagctgttttgtgacaa 160
           |||||||||| || || ||| || |||| || ||||||||
Sbjct: 179 atgagggtcggatttatcagttgaagctcttctgtgacaa 218
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>gb|AY062760.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme
           (At2g36060; F11F19.3) mRNA, complete cds
          Length = 769

 Score =  129 bits (65), Expect = 3e-27
 Identities = 136/160 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
           ||||||| || || ||||| || ||||||||||||||||| |||||||||||||||||||
Sbjct: 177 agcttgaacgtggagagaaaggtattggagatggaactgtgagctatggaatggatgatg 236

                                                                       
Query: 61  ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtcc 120
             |||||||| || ||||| || ||||||||||| || || ||||||||||| ||||| |
Sbjct: 237 gagatgacatttatatgcgctcttggactggcactatcatcggtcctcacaacactgtac 296

                                                   
Query: 121 atgagggtcgcatctaccagctgnagctgttttgtgacaa 160
           |||||||||| || || ||| || |||| || ||||||||
Sbjct: 297 atgagggtcggatttatcagttgaagctcttctgtgacaa 336
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>gb|AY089084.1| Arabidopsis thaliana clone 29951 mRNA, complete sequence
          Length = 798

 Score =  129 bits (65), Expect = 3e-27
 Identities = 136/160 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
           ||||||| || || ||||| || ||||||||||||||||| |||||||||||||||||||
Sbjct: 219 agcttgaacgtggagagaaaggtattggagatggaactgtgagctatggaatggatgatg 278

                                                                       
Query: 61  ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtcc 120
             |||||||| || ||||| || ||||||||||| || || ||||||||||| ||||| |
Sbjct: 279 gagatgacatttatatgcgctcttggactggcactatcatcggtcctcacaacactgtac 338

                                                   
Query: 121 atgagggtcgcatctaccagctgnagctgttttgtgacaa 160
           |||||||||| || || ||| || |||| || ||||||||
Sbjct: 339 atgagggtcggatttatcagttgaagctcttctgtgacaa 378
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>gb|AY085609.1| Arabidopsis thaliana clone 16125 mRNA, complete sequence
          Length = 832

 Score =  129 bits (65), Expect = 3e-27
 Identities = 136/160 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
           ||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||||
Sbjct: 189 agcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgatg 248

                                                                       
Query: 61  ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtcc 120
             |||||||| || ||||| || ||||||||||| || || ||||||||||| ||||| |
Sbjct: 249 gagatgacatctatatgcgttcttggactggcactatcatcggtcctcacaacactgttc 308

                                                   
Query: 121 atgagggtcgcatctaccagctgnagctgttttgtgacaa 160
           |||| ||| | ||||| ||| || |||| |||||||||||
Sbjct: 309 atgaaggtagaatctatcagttgaagctcttttgtgacaa 348
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>gb|AC150979.15| Medicago truncatula clone mth2-115a17, complete sequence
          Length = 152779

 Score =  125 bits (63), Expect = 4e-26
 Identities = 93/103 (90%)
 Strand = Plus / Minus

                                                                          
Query: 1      agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
              |||||||||| || |||||||| ||||||||||||||||| ||||||||||||||||| |
Sbjct: 105547 agcttgagcgaggtgagaagggaattggagatggaactgttagctatggaatggatgacg 105488

                                                         
Query: 61     ctgatgacatatacatgcggtcatggactggcaccattattgg 103
              ||||||| |||| ||||| |||||||||||| || ||||||||
Sbjct: 105487 ctgatgatatattcatgcagtcatggactgggactattattgg 105445
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>gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete sequence
          Length = 120870

 Score =  125 bits (63), Expect = 4e-26
 Identities = 93/103 (90%)
 Strand = Plus / Minus

                                                                        
Query: 1    agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
            |||||||||| || |||||||| ||||||||||||||||| ||||||||||||||||| |
Sbjct: 2879 agcttgagcgaggtgagaagggaattggagatggaactgttagctatggaatggatgacg 2820

                                                       
Query: 61   ctgatgacatatacatgcggtcatggactggcaccattattgg 103
            ||||||| |||| ||||| |||||||||||| || ||||||||
Sbjct: 2819 ctgatgatatattcatgcagtcatggactgggactattattgg 2777
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>gb|DQ235194.1| Solanum tuberosum clone 168B03 ubiquitin-conjugating enzyme family
           protein-like mRNA, complete cds
          Length = 682

 Score =  123 bits (62), Expect = 2e-25
 Identities = 136/161 (84%)
 Strand = Plus / Plus

                                                                       
Query: 3   cttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatgct 62
           ||||| || ||||||||||| ||||||||||| || || |||||||| ||||||||||  
Sbjct: 166 cttgaacgtggggagaagggtattggagatgggacagtgagctatggtatggatgatgga 225

                                                                       
Query: 63  gatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtccat 122
           ||||| || || ||||| || |||||||||||||||||||||||||||||| |||| |||
Sbjct: 226 gatgatatttatatgcgttcttggactggcaccattattggtcctcacaattctgtgcat 285

                                                    
Query: 123 gagggtcgcatctaccagctgnagctgttttgtgacaagga 163
           || || ||||| || ||| || |||| || || ||||||||
Sbjct: 286 gaaggccgcatttatcagttgaagctattctgcgacaagga 326
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>ref|XM_469523.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 486

 Score =  123 bits (62), Expect = 2e-25
 Identities = 133/157 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
           |||||||||| || |||||||||||||| ||||| || || |||||||||||||||||||
Sbjct: 62  agcttgagcgaggtgagaagggcattggtgatgggacagtgagctatggaatggatgatg 121

                                                                       
Query: 61  ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtcc 120
           ||||||||||||| ||||| || ||||| || || || ||||| ||||  |||||||| |
Sbjct: 122 ctgatgacatatatatgcgttcctggacaggaactatcattggccctcctaatactgttc 181

                                                
Query: 121 atgagggtcgcatctaccagctgnagctgttttgtga 157
           ||||||| || ||||| ||| || || |||| |||||
Sbjct: 182 atgagggacgaatctatcagttgaagttgttctgtga 218
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>gb|DQ191643.1| Solanum tuberosum ubiquitin-conjugating enzyme family protein-like
           protein mRNA, complete cds
          Length = 764

 Score =  123 bits (62), Expect = 2e-25
 Identities = 136/161 (84%)
 Strand = Plus / Plus

                                                                       
Query: 3   cttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatgct 62
           ||||| || ||||||||||| ||||||||||| || || |||||||| ||||||||||  
Sbjct: 158 cttgaacgtggggagaagggtattggagatgggacagtgagctatggtatggatgatgga 217

                                                                       
Query: 63  gatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtccat 122
           ||||| || || ||||| || |||||||||||||||||||||||||||||| |||| |||
Sbjct: 218 gatgatatttatatgcgttcttggactggcaccattattggtcctcacaattctgtgcat 277

                                                    
Query: 123 gagggtcgcatctaccagctgnagctgttttgtgacaagga 163
           || || ||||| || ||| || |||| || || ||||||||
Sbjct: 278 gaaggccgcatttatcagttgaagctattctgcgacaagga 318
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>dbj|AK120951.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038L10, full
           insert sequence
          Length = 790

 Score =  123 bits (62), Expect = 2e-25
 Identities = 133/157 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
           |||||||||| || |||||||||||||| ||||| || || |||||||||||||||||||
Sbjct: 155 agcttgagcgaggtgagaagggcattggtgatgggacagtgagctatggaatggatgatg 214

                                                                       
Query: 61  ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtcc 120
           ||||||||||||| ||||| || ||||| || || || ||||| ||||  |||||||| |
Sbjct: 215 ctgatgacatatatatgcgttcctggacaggaactatcattggccctcctaatactgttc 274

                                                
Query: 121 atgagggtcgcatctaccagctgnagctgttttgtga 157
           ||||||| || ||||| ||| || || |||| |||||
Sbjct: 275 atgagggacgaatctatcagttgaagttgttctgtga 311
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>dbj|AK068060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130B07, full
           insert sequence
          Length = 924

 Score =  119 bits (60), Expect = 3e-24
 Identities = 137/163 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
           |||||||| | |||||||||||||| || |||||| | || |||||||||||||||||||
Sbjct: 263 agcttgagagaggggagaagggcatcggtgatggatcagtaagctatggaatggatgatg 322

                                                                       
Query: 61  ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtcc 120
           | || || || |||||||| || ||||| ||||| ||||||||||| || || |||||||
Sbjct: 323 cagacgatatctacatgcgctcttggacaggcacaattattggtccccataacactgtcc 382

                                                      
Query: 121 atgagggtcgcatctaccagctgnagctgttttgtgacaagga 163
           ||||||| || || ||||| ||| |||| || || ||||||||
Sbjct: 383 atgagggccggatataccaactgaagcttttctgcgacaagga 425
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>gb|AY107839.1| Zea mays PCO143146 mRNA sequence
          Length = 1245

 Score =  119 bits (60), Expect = 3e-24
 Identities = 122/143 (85%)
 Strand = Plus / Plus

                                                                       
Query: 15  gagaagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatac 74
           |||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||  
Sbjct: 298 gagaagggcattggtgatggaactgtgagctatgggatggacgatgctgatgacatattt 357

                                                                       
Query: 75  atgcggtcatggactggcaccattattggtcctcacaatactgtccatgagggtcgcatc 134
           |||||||| ||||| || || || |||||||||| ||| ||||| || ||||| || |||
Sbjct: 358 atgcggtcctggacaggaactatcattggtcctcccaacactgttcacgagggacgaatc 417

                                  
Query: 135 taccagctgnagctgttttgtga 157
           || ||| |  |||||||||||||
Sbjct: 418 tatcagttaaagctgttttgtga 440
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>dbj|AP004536.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT15N19, TM0097b,
             complete sequence
          Length = 78574

 Score =  119 bits (60), Expect = 3e-24
 Identities = 90/100 (90%)
 Strand = Plus / Minus

                                                                         
Query: 1     agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
             |||||||||| || |||||||| ||||||||||||||||| |||||||||||||| || |
Sbjct: 75151 agcttgagcgaggtgagaagggaattggagatggaactgtaagctatggaatggacgacg 75092

                                                     
Query: 61    ctgatgacatatacatgcggtcatggactggcaccattat 100
             ||||||| |||||||||| |||||||||||| || |||||
Sbjct: 75091 ctgatgatatatacatgcagtcatggactggaacaattat 75052
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>gb|DQ160024.1| Taraxacum officinale TO25-123 (To25-123) mRNA, partial cds
          Length = 203

 Score =  117 bits (59), Expect = 1e-23
 Identities = 115/134 (85%)
 Strand = Plus / Plus

                                                                       
Query: 27  ggagatggaactgtcagctatggaatggatgatgctgatgacatatacatgcggtcatgg 86
           |||||||| || || || ||||||||||||||||  || ||||| |||||||| ||||||
Sbjct: 23  ggagatggcacagtgagttatggaatggatgatggcgacgacatttacatgcgttcatgg 82

                                                                       
Query: 87  actggcaccattattggtcctcacaatactgtccatgagggtcgcatctaccagctgnag 146
           ||||||||||| ||||||||||||||  |||| || || |||||||| || || ||| ||
Sbjct: 83  actggcaccatcattggtcctcacaactctgtacacgaaggtcgcatttatcaactgaag 142

                         
Query: 147 ctgttttgtgacaa 160
           ||||||||||||||
Sbjct: 143 ctgttttgtgacaa 156
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>ref|NM_180353.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT3G52560 transcript variant
           AT3G52560.2 mRNA, complete cds
          Length = 864

 Score =  115 bits (58), Expect = 4e-23
 Identities = 137/163 (84%), Gaps = 3/163 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
           ||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||||
Sbjct: 188 agcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgatg 247

                                                                       
Query: 61  ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaa---tactg 117
             |||||||| || ||||| || |||||||||||||| || |||||||||||    ||||
Sbjct: 248 gagatgacatctatatgcgttcttggactggcaccatcatcggtcctcacaacgtaactg 307

                                                      
Query: 118 tccatgagggtcgcatctaccagctgnagctgttttgtgacaa 160
           | ||||| ||| | ||||| ||| || |||| |||||||||||
Sbjct: 308 ttcatgaaggtagaatctatcagttgaagctcttttgtgacaa 350
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>gb|AY587772.1| Tamarix androssowii ubiquitin-conjugating enzyme family protein
           mRNA, complete cds
          Length = 607

 Score =  115 bits (58), Expect = 4e-23
 Identities = 117/137 (85%)
 Strand = Plus / Plus

                                                                       
Query: 24  attggagatggaactgtcagctatggaatggatgatgctgatgacatatacatgcggtca 83
           ||||||||||||| |||||| ||||| ||||||||||  ||||| ||||| ||||| || 
Sbjct: 186 attggagatggaagtgtcagttatggtatggatgatggagatgatatatatatgcgttct 245

                                                                       
Query: 84  tggactggcaccattattggtcctcacaatactgtccatgagggtcgcatctaccagctg 143
           ||||| ||||| || |||||||||||||||||||| |||||||| ||||| || || |||
Sbjct: 246 tggacaggcacaataattggtcctcacaatactgtacatgagggccgcatttatcaactg 305

                            
Query: 144 nagctgttttgtgacaa 160
            |||| || ||||||||
Sbjct: 306 aagctcttctgtgacaa 322
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>gb|DQ097727.1| Arachis hypogaea ubiquitin-conjugating enzyme 2 mRNA, complete cds
          Length = 818

 Score =  115 bits (58), Expect = 4e-23
 Identities = 94/106 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
           |||||||| | || |||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 163 agcttgagagaggtgagaagggaattggagatggaactgtaagctatggaatggatgatg 222

                                                         
Query: 61  ctgatgacatatacatgcggtcatggactggcaccattattggtcc 106
           ||||||| || |||||||  ||||||||||| || ||||| |||||
Sbjct: 223 ctgatgatatctacatgcaatcatggactgggacaattataggtcc 268
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>emb|AL353912.1|ATF3C22 Arabidopsis thaliana DNA chromosome 3, BAC clone F3C22
          Length = 100028

 Score =  111 bits (56), Expect = 7e-22
 Identities = 98/112 (87%)
 Strand = Plus / Minus

                                                                         
Query: 1     agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
             ||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||||
Sbjct: 15861 agcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgatg 15802

                                                                 
Query: 61    ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaa 112
               |||||||| || ||||| || |||||||||||||| || |||||||||||
Sbjct: 15801 gagatgacatctatatgcgttcttggactggcaccatcatcggtcctcacaa 15750
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>emb|AL050300.2|ATF22O6 Arabidopsis thaliana DNA chromosome 3, BAC clone F22O6
          Length = 93443

 Score =  111 bits (56), Expect = 7e-22
 Identities = 98/112 (87%)
 Strand = Plus / Minus

                                                                         
Query: 1     agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
             ||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||||
Sbjct: 77578 agcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgatg 77519

                                                                 
Query: 61    ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaa 112
               |||||||| || ||||| || |||||||||||||| || |||||||||||
Sbjct: 77518 gagatgacatctatatgcgttcttggactggcaccatcatcggtcctcacaa 77467
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>ref|NM_179928.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT2G36060 transcript variant
           AT2G36060.2 mRNA, complete cds
          Length = 840

 Score =  107 bits (54), Expect = 1e-20
 Identities = 136/163 (83%), Gaps = 3/163 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
           ||||||| || || ||||| || ||||||||||||||||| |||||||||||||||||||
Sbjct: 243 agcttgaacgtggagagaaaggtattggagatggaactgtgagctatggaatggatgatg 302

                                                                       
Query: 61  ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaa---tactg 117
             |||||||| || ||||| || ||||||||||| || || |||||||||||    ||||
Sbjct: 303 gagatgacatttatatgcgctcttggactggcactatcatcggtcctcacaacgtaactg 362

                                                      
Query: 118 tccatgagggtcgcatctaccagctgnagctgttttgtgacaa 160
           | ||||||||||| || || ||| || |||| || ||||||||
Sbjct: 363 tacatgagggtcggatttatcagttgaagctcttctgtgacaa 405
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  103 bits (52), Expect = 2e-19
 Identities = 79/88 (89%)
 Strand = Plus / Plus

                                                                            
Query: 1        agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
                |||||||||| || |||||||||||||| ||||| || || |||||||||||||||||||
Sbjct: 28490535 agcttgagcgaggtgagaagggcattggtgatgggacagtgagctatggaatggatgatg 28490594

                                            
Query: 61       ctgatgacatatacatgcggtcatggac 88
                ||||||||||||| ||||| || |||||
Sbjct: 28490595 ctgatgacatatatatgcgttcctggac 28490622
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>gb|AC007017.4| Arabidopsis thaliana chromosome 2 clone F11F19 map g6825, complete
             sequence
          Length = 120938

 Score =  103 bits (52), Expect = 2e-19
 Identities = 97/112 (86%)
 Strand = Plus / Plus

                                                                         
Query: 1     agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
             ||||||| || || ||||| || ||||||||||||||||| |||||||||||||||||||
Sbjct: 13438 agcttgaacgtggagagaaaggtattggagatggaactgtgagctatggaatggatgatg 13497

                                                                 
Query: 61    ctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaa 112
               |||||||| || ||||| || ||||||||||| || || |||||||||||
Sbjct: 13498 gagatgacatttatatgcgctcttggactggcactatcatcggtcctcacaa 13549
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  103 bits (52), Expect = 2e-19
 Identities = 79/88 (89%)
 Strand = Plus / Plus

                                                                            
Query: 1        agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
                |||||||||| || |||||||||||||| ||||| || || |||||||||||||||||||
Sbjct: 28581859 agcttgagcgaggtgagaagggcattggtgatgggacagtgagctatggaatggatgatg 28581918

                                            
Query: 61       ctgatgacatatacatgcggtcatggac 88
                ||||||||||||| ||||| || |||||
Sbjct: 28581919 ctgatgacatatatatgcgttcctggac 28581946
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>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete
             sequence
          Length = 143681

 Score =  103 bits (52), Expect = 2e-19
 Identities = 79/88 (89%)
 Strand = Plus / Plus

                                                                         
Query: 1     agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
             |||||||||| || |||||||||||||| ||||| || || |||||||||||||||||||
Sbjct: 84665 agcttgagcgaggtgagaagggcattggtgatgggacagtgagctatggaatggatgatg 84724

                                         
Query: 61    ctgatgacatatacatgcggtcatggac 88
             ||||||||||||| ||||| || |||||
Sbjct: 84725 ctgatgacatatatatgcgttcctggac 84752
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>ref|NM_102175.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT1G23260 mRNA, complete cds
          Length = 772

 Score =  101 bits (51), Expect = 6e-19
 Identities = 90/103 (87%)
 Strand = Plus / Plus

                                                                       
Query: 15  gagaagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatac 74
           ||||| || ||||||||||| ||||| |||||||||||||||||||||||||| || || 
Sbjct: 184 gagaaaggtattggagatggtactgttagctatggaatggatgatgctgatgatatttat 243

                                                      
Query: 75  atgcggtcatggactggcaccattattggtcctcacaatactg 117
           ||||  || ||||||||||||||| |||||||||  |||||||
Sbjct: 244 atgcaatcttggactggcaccattcttggtcctcctaatactg 286
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>gb|AY093340.1| Arabidopsis thaliana similar to DNA binding protein (At1g23260)
           mRNA, complete cds
          Length = 618

 Score =  101 bits (51), Expect = 6e-19
 Identities = 90/103 (87%)
 Strand = Plus / Plus

                                                                       
Query: 15  gagaagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatac 74
           ||||| || ||||||||||| ||||| |||||||||||||||||||||||||| || || 
Sbjct: 70  gagaaaggtattggagatggtactgttagctatggaatggatgatgctgatgatatttat 129

                                                      
Query: 75  atgcggtcatggactggcaccattattggtcctcacaatactg 117
           ||||  || ||||||||||||||| |||||||||  |||||||
Sbjct: 130 atgcaatcttggactggcaccattcttggtcctcctaatactg 172
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>gb|AY059896.1| Arabidopsis thaliana similar to DNA binding protein (At1g23260;
           F26F24.10) mRNA, complete cds
          Length = 771

 Score =  101 bits (51), Expect = 6e-19
 Identities = 90/103 (87%)
 Strand = Plus / Plus

                                                                       
Query: 15  gagaagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatac 74
           ||||| || ||||||||||| ||||| |||||||||||||||||||||||||| || || 
Sbjct: 184 gagaaaggtattggagatggtactgttagctatggaatggatgatgctgatgatatttat 243

                                                      
Query: 75  atgcggtcatggactggcaccattattggtcctcacaatactg 117
           ||||  || ||||||||||||||| |||||||||  |||||||
Sbjct: 244 atgcaatcttggactggcaccattcttggtcctcctaatactg 286
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>gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana BAC F26F24 from chromosome I,
             complete sequence
          Length = 99053

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 83/94 (88%)
 Strand = Plus / Minus

                                                                         
Query: 15    gagaagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatac 74
             ||||| || ||||||||||| ||||| |||||||||||||||||||||||||| || || 
Sbjct: 34639 gagaaaggtattggagatggtactgttagctatggaatggatgatgctgatgatatttat 34580

                                               
Query: 75    atgcggtcatggactggcaccattattggtcctc 108
             ||||  || ||||||||||||||| |||||||||
Sbjct: 34579 atgcaatcttggactggcaccattcttggtcctc 34546
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>gb|AF051209.1|AF051209 Picea mariana CROC-1-like protein (Sb13) mRNA, partial cds
          Length = 700

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 89/102 (87%)
 Strand = Plus / Plus

                                                                       
Query: 12  ggggagaagggcattggagatggaactgtcagctatggaatggatgatgctgatgacata 71
           |||||||| || || || ||||||| ||||||||| |||||||| |||   ||||| |||
Sbjct: 57  ggggagaaaggaataggcgatggaagtgtcagctacggaatggacgatagcgatgatata 116

                                                     
Query: 72  tacatgcggtcatggactggcaccattattggtcctcacaat 113
           |||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 117 tacatgcggtcatggactggtaccatcattggtcctcacaat 158
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>gb|BT013203.1| Lycopersicon esculentum clone 134376R, mRNA sequence
          Length = 843

 Score = 95.6 bits (48), Expect = 4e-17
 Identities = 107/127 (84%)
 Strand = Plus / Plus

                                                                       
Query: 30  gatggaactgtcagctatggaatggatgatgctgatgacatatacatgcggtcatggact 89
           |||||||||||||||||||| ||||||||||| |||||| | ||||||| ||||||||| 
Sbjct: 226 gatggaactgtcagctatgggatggatgatgcagatgacgtgtacatgcagtcatggaca 285

                                                                       
Query: 90  ggcaccattattggtcctcacaatactgtccatgagggtcgcatctaccagctgnagctg 149
           || || || ||||| ||||  |||||||| || || || |||||||| |||||| | || 
Sbjct: 286 ggaactatcattggccctcctaatactgtacacgaagggcgcatctatcagctgaaacta 345

                  
Query: 150 ttttgtg 156
           |||||||
Sbjct: 346 ttttgtg 352
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 91.7 bits (46), Expect = 6e-16
 Identities = 91/106 (85%)
 Strand = Plus / Minus

                                                                            
Query: 1        agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
                |||||||| | |||||||||||||| || |||||| | || |||||||||||||||||||
Sbjct: 25593345 agcttgagagaggggagaagggcatcggtgatggatcagtaagctatggaatggatgatg 25593286

                                                              
Query: 61       ctgatgacatatacatgcggtcatggactggcaccattattggtcc 106
                | || || || |||||||| || ||||| ||||| |||||||||||
Sbjct: 25593285 cagacgatatctacatgcgctcttggacaggcacaattattggtcc 25593240



 Score = 38.2 bits (19), Expect = 7.9
 Identities = 42/50 (84%)
 Strand = Plus / Minus

                                                                  
Query: 114      actgtccatgagggtcgcatctaccagctgnagctgttttgtgacaagga 163
                |||||||||||||| || || ||||| ||| |||| || || ||||||||
Sbjct: 25593109 actgtccatgagggccggatataccaactgaagcttttctgcgacaagga 25593060
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 91.7 bits (46), Expect = 6e-16
 Identities = 91/106 (85%)
 Strand = Plus / Minus

                                                                            
Query: 1        agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
                |||||||| | |||||||||||||| || |||||| | || |||||||||||||||||||
Sbjct: 25521521 agcttgagagaggggagaagggcatcggtgatggatcagtaagctatggaatggatgatg 25521462

                                                              
Query: 61       ctgatgacatatacatgcggtcatggactggcaccattattggtcc 106
                | || || || |||||||| || ||||| ||||| |||||||||||
Sbjct: 25521461 cagacgatatctacatgcgctcttggacaggcacaattattggtcc 25521416



 Score = 38.2 bits (19), Expect = 7.9
 Identities = 42/50 (84%)
 Strand = Plus / Minus

                                                                  
Query: 114      actgtccatgagggtcgcatctaccagctgnagctgttttgtgacaagga 163
                |||||||||||||| || || ||||| ||| |||| || || ||||||||
Sbjct: 25521285 actgtccatgagggccggatataccaactgaagcttttctgcgacaagga 25521236
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>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 127003

 Score = 91.7 bits (46), Expect = 6e-16
 Identities = 91/106 (85%)
 Strand = Plus / Plus

                                                                         
Query: 1     agcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatg 60
             |||||||| | |||||||||||||| || |||||| | || |||||||||||||||||||
Sbjct: 80373 agcttgagagaggggagaagggcatcggtgatggatcagtaagctatggaatggatgatg 80432

                                                           
Query: 61    ctgatgacatatacatgcggtcatggactggcaccattattggtcc 106
             | || || || |||||||| || ||||| ||||| |||||||||||
Sbjct: 80433 cagacgatatctacatgcgctcttggacaggcacaattattggtcc 80478



 Score = 38.2 bits (19), Expect = 7.9
 Identities = 42/50 (84%)
 Strand = Plus / Plus

                                                               
Query: 114   actgtccatgagggtcgcatctaccagctgnagctgttttgtgacaagga 163
             |||||||||||||| || || ||||| ||| |||| || || ||||||||
Sbjct: 80609 actgtccatgagggccggatataccaactgaagcttttctgcgacaagga 80658
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>ref|NM_105734.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT1G70660 mRNA, complete cds
          Length = 838

 Score = 77.8 bits (39), Expect = 9e-12
 Identities = 87/103 (84%)
 Strand = Plus / Plus

                                                                       
Query: 15  gagaagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatac 74
           ||||| || ||||||||||| || || || ||||||||||||||||||||||| || |  
Sbjct: 230 gagaaaggaattggagatgggacagtgagttatggaatggatgatgctgatgatattttg 289

                                                      
Query: 75  atgcggtcatggactggcaccattattggtcctcacaatactg 117
           ||||  || |||||||| |||||| |||||||||| |||||||
Sbjct: 290 atgcaatcttggactggtaccattcttggtcctcataatactg 332
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>gb|BT004943.1| Arabidopsis thaliana clone U20398 putative E2,
           ubiquitin-conjugating enzyme (At1g70660) mRNA, complete
           cds
          Length = 511

 Score = 77.8 bits (39), Expect = 9e-12
 Identities = 87/103 (84%)
 Strand = Plus / Plus

                                                                       
Query: 15  gagaagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatac 74
           ||||| || ||||||||||| || || || ||||||||||||||||||||||| || |  
Sbjct: 70  gagaaaggaattggagatgggacagtgagttatggaatggatgatgctgatgatattttg 129

                                                      
Query: 75  atgcggtcatggactggcaccattattggtcctcacaatactg 117
           ||||  || |||||||| |||||| |||||||||| |||||||
Sbjct: 130 atgcaatcttggactggtaccattcttggtcctcataatactg 172
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>gb|BT004011.1| Arabidopsis thaliana clone RAFL14-86-C24 (R20398) putative E2,
           ubiquitin-conjugating enzyme (At1g70660) mRNA, complete
           cds
          Length = 827

 Score = 77.8 bits (39), Expect = 9e-12
 Identities = 87/103 (84%)
 Strand = Plus / Plus

                                                                       
Query: 15  gagaagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatac 74
           ||||| || ||||||||||| || || || ||||||||||||||||||||||| || |  
Sbjct: 215 gagaaaggaattggagatgggacagtgagttatggaatggatgatgctgatgatattttg 274

                                                      
Query: 75  atgcggtcatggactggcaccattattggtcctcacaatactg 117
           ||||  || |||||||| |||||| |||||||||| |||||||
Sbjct: 275 atgcaatcttggactggtaccattcttggtcctcataatactg 317
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>gb|AY088344.1| Arabidopsis thaliana clone 5821 mRNA, complete sequence
          Length = 815

 Score = 77.8 bits (39), Expect = 9e-12
 Identities = 87/103 (84%)
 Strand = Plus / Plus

                                                                       
Query: 15  gagaagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatac 74
           ||||| || ||||||||||| || || || ||||||||||||||||||||||| || |  
Sbjct: 207 gagaaaggaattggagatgggacagtgagttatggaatggatgatgctgatgatattttg 266

                                                      
Query: 75  atgcggtcatggactggcaccattattggtcctcacaatactg 117
           ||||  || |||||||| |||||| |||||||||| |||||||
Sbjct: 267 atgcaatcttggactggtaccattcttggtcctcataatactg 309
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>gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A18 genomic sequence, complete
             sequence
          Length = 108582

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                         
Query: 15    gagaagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatac 74
             ||||| || ||||||||||| || || || ||||||||||||||||||||||| || |  
Sbjct: 63589 gagaaaggaattggagatgggacagtgagttatggaatggatgatgctgatgatattttg 63530

                                                
Query: 75    atgcggtcatggactggcaccattattggtcctca 109
             ||||  || |||||||| |||||| ||||||||||
Sbjct: 63529 atgcaatcttggactggtaccattcttggtcctca 63495
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>ref|XM_474414.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 447

 Score = 46.1 bits (23), Expect = 0.032
 Identities = 73/90 (81%)
 Strand = Plus / Plus

                                                                       
Query: 74  catgcggtcatggactggcaccattattggtcctcacaatactgtccatgagggtcgcat 133
           |||||| || ||||| ||||| || ||||| || | |||  |||| || ||||| |||||
Sbjct: 141 catgcgctcctggaccggcacaatcattggaccactcaactctgtgcacgaggggcgcat 200

                                         
Query: 134 ctaccagctgnagctgttttgtgacaagga 163
           |||||||||| |||| || || ||||||||
Sbjct: 201 ctaccagctgaagctcttctgcgacaagga 230
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>dbj|AK066799.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013077E20, full
           insert sequence
          Length = 813

 Score = 46.1 bits (23), Expect = 0.032
 Identities = 73/90 (81%)
 Strand = Plus / Plus

                                                                       
Query: 74  catgcggtcatggactggcaccattattggtcctcacaatactgtccatgagggtcgcat 133
           |||||| || ||||| ||||| || ||||| || | |||  |||| || ||||| |||||
Sbjct: 154 catgcgctcctggaccggcacaatcattggaccactcaactctgtgcacgaggggcgcat 213

                                         
Query: 134 ctaccagctgnagctgttttgtgacaagga 163
           |||||||||| |||| || || ||||||||
Sbjct: 214 ctaccagctgaagctcttctgcgacaagga 243
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>gb|DQ267678.1| Tricholoma vaccinum isolate GK6514 ubiquitin-conjugating enzyme
          variant MMS2-like mRNA, partial sequence
          Length = 229

 Score = 46.1 bits (23), Expect = 0.032
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                         
Query: 25 ttggagatggaactgtcagctatggaatgga 55
          |||| ||||| ||||||||||||||||||||
Sbjct: 46 ttggtgatgggactgtcagctatggaatgga 16
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 123      gagggtcgcatctaccagctgnagctgttttgtgacaagga 163
                ||||| ||||||||||||||| |||| || || ||||||||
Sbjct: 35011325 gaggggcgcatctaccagctgaagctcttctgcgacaagga 35011365
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>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete
             sequence
          Length = 94152

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 123   gagggtcgcatctaccagctgnagctgttttgtgacaagga 163
             ||||| ||||||||||||||| |||| || || ||||||||
Sbjct: 43073 gaggggcgcatctaccagctgaagctcttctgcgacaagga 43113
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>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09,
             complete sequence
          Length = 145391

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 123   gagggtcgcatctaccagctgnagctgttttgtgacaagga 163
             ||||| ||||||||||||||| |||| || || ||||||||
Sbjct: 70375 gaggggcgcatctaccagctgaagctcttctgcgacaagga 70415
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>gb|AC037197.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0065H03, complete sequence
          Length = 141017

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    tgatgctgatgacatataca 75
             ||||||||||||||||||||
Sbjct: 84734 tgatgctgatgacatataca 84715
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>ref|XM_422845.1| PREDICTED: Gallus gallus similar to KIAA0669 gene product
           (LOC425043), mRNA
          Length = 2642

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 33  ggaactgtcagctatggaat 52
           ||||||||||||||||||||
Sbjct: 741 ggaactgtcagctatggaat 722
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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
              Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     tgatgctgatgacatataca 75
              ||||||||||||||||||||
Sbjct: 480560 tgatgctgatgacatataca 480541
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>gb|AC104322.4| Oryza sativa chromosome 10 BAC OSJNBb0005F01 genomic sequence, complete
              sequence
          Length = 151428

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     tgatgctgatgacatataca 75
              ||||||||||||||||||||
Sbjct: 101326 tgatgctgatgacatataca 101307
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>dbj|AB224400.1| Aspergillus oryzae cDNA, contig sequence: AoEST1245
          Length = 1232

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 114  actgtccatgagggtcgcat 133
            ||||||||||||||||||||
Sbjct: 1057 actgtccatgagggtcgcat 1076
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 114     actgtccatgagggtcgcat 133
               ||||||||||||||||||||
Sbjct: 2405018 actgtccatgagggtcgcat 2404999
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>gb|AY062935.1| Chlamydomonas reinhardtii ubiquitin-conjugating enzyme E2 isoform
           (UBCX) mRNA, complete cds
          Length = 1007

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 9   cgcggggagaagggcattggagatggaactgt 40
           ||||| ||||||||| |||| |||||||||||
Sbjct: 119 cgcggcgagaagggctttggtgatggaactgt 150
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 56      tgatgctgatgacatataca 75
               ||||||||||||||||||||
Sbjct: 6165921 tgatgctgatgacatataca 6165902



 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     tgatgctgatgacatataca 75
              ||||||||||||||||||||
Sbjct: 480560 tgatgctgatgacatataca 480541
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 56      tgatgctgatgacatataca 75
               ||||||||||||||||||||
Sbjct: 6167507 tgatgctgatgacatataca 6167488



 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     tgatgctgatgacatataca 75
              ||||||||||||||||||||
Sbjct: 480557 tgatgctgatgacatataca 480538
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>emb|AL772211.7| Mouse DNA sequence from clone RP23-473B24 on chromosome 4, complete
              sequence
          Length = 189040

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     gggcattggagatggaactg 39
              ||||||||||||||||||||
Sbjct: 184855 gggcattggagatggaactg 184874
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>ref|NM_121805.2| Arabidopsis thaliana DNA binding / transcription factor AT5G18000
           mRNA, complete cds
          Length = 1681

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 145 agctgttttgtgacaagga 163
           |||||||||||||||||||
Sbjct: 659 agctgttttgtgacaagga 641
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>gb|CP000114.1| Streptococcus agalactiae A909, complete genome
          Length = 2127839

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 29     agatggaactgtcagctat 47
              |||||||||||||||||||
Sbjct: 617746 agatggaactgtcagctat 617764
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>gb|AC147876.1| Homo sapiens BAC clone RP11-718M20 from 4, complete sequence
          Length = 119938

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 81   tcatggactggcaccatta 99
            |||||||||||||||||||
Sbjct: 2130 tcatggactggcaccatta 2148
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>gb|AE014216.1| Streptococcus agalactiae 2603V/R section 26 of 100 of the complete
            genome
          Length = 20092

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 29   agatggaactgtcagctat 47
            |||||||||||||||||||
Sbjct: 9541 agatggaactgtcagctat 9559
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>gb|AC151992.3| Mus musculus BAC clone RP23-212H13 from chromosome 8, complete sequence
          Length = 182428

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 88     ctggcaccattattggtcc 106
              |||||||||||||||||||
Sbjct: 112748 ctggcaccattattggtcc 112730
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>emb|AL766846.1|SAG766846 Streptococcus agalactiae NEM316 complete genome, segment 4
          Length = 224050

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 29    agatggaactgtcagctat 47
             |||||||||||||||||||
Sbjct: 41734 agatggaactgtcagctat 41752
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>emb|BX914223.9| Zebrafish DNA sequence from clone DKEY-98M24 in linkage group 14,
              complete sequence
          Length = 252048

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 92     caccattattggtcctcac 110
              |||||||||||||||||||
Sbjct: 172934 caccattattggtcctcac 172952
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>gb|AC023705.4| Drosophila melanogaster X BAC RP98-7L6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 184796

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    gagatggaactgtcagcta 46
             |||||||||||||||||||
Sbjct: 87753 gagatggaactgtcagcta 87735
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>gb|AC009987.17| Homo sapiens chromosome 10 clone RP11-391M7, complete sequence
          Length = 196808

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 42     agctatggaatggatgatgctga 64
              ||||||||||||| |||||||||
Sbjct: 186723 agctatggaatgggtgatgctga 186701
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>gb|AC026393.11| Homo sapiens chromosome 10 clone RP11-308N23, complete sequence
          Length = 84208

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 84    tggactggcaccattattggtcc 106
             |||||||| ||||||||||||||
Sbjct: 54374 tggactggtaccattattggtcc 54352
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>gb|AY265063.1| HIV-1 isolate 98CM1583 from Cameroon nef protein (nef) gene,
           complete cds
          Length = 627

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 46  atggaatggatgatgctga 64
           |||||||||||||||||||
Sbjct: 518 atggaatggatgatgctga 536
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>gb|AC156447.2| Volvox carteri clone JGIAOBO-33C7, complete sequence
          Length = 34892

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 50   aatggatgatgctgatgacatatacat 76
            |||| |||||| |||||||||||||||
Sbjct: 3447 aatgcatgatgatgatgacatatacat 3421
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>gb|AC066613.7|AC066613 Homo sapiens chromosome 15 clone RP11-707P17 map 15q21.2, complete
             sequence
          Length = 169077

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 18    aagggcattggagatggaa 36
             |||||||||||||||||||
Sbjct: 24933 aagggcattggagatggaa 24951
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>gb|AY803437.1| HIV-1 isolate 03-9270NM from Uganda nef protein (nef) gene,
           complete cds
          Length = 616

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 46  atggaatggatgatgctga 64
           |||||||||||||||||||
Sbjct: 506 atggaatggatgatgctga 524
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 91       gcaccattattggtcctca 109
                |||||||||||||||||||
Sbjct: 13885635 gcaccattattggtcctca 13885617
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>gb|AC020891.8|AC020891 Homo sapiens chromosome 15 clone RP11-108K3 map 15q21, complete sequence
          Length = 144714

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 18     aagggcattggagatggaa 36
              |||||||||||||||||||
Sbjct: 123687 aagggcattggagatggaa 123705
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>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1051E10
          Length = 207782

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 91    gcaccattattggtcctca 109
             |||||||||||||||||||
Sbjct: 45937 gcaccattattggtcctca 45919
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>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0440D10
          Length = 144340

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 91     gcaccattattggtcctca 109
              |||||||||||||||||||
Sbjct: 123038 gcaccattattggtcctca 123020
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>dbj|AB015473.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCM23
          Length = 36495

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 145   agctgttttgtgacaagga 163
             |||||||||||||||||||
Sbjct: 20591 agctgttttgtgacaagga 20609
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>emb|CR387997.18| Zebrafish DNA sequence from clone DKEY-13E3 in linkage group 4,
            complete sequence
          Length = 158108

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 92   caccattattggtcctcac 110
            |||||||||||||||||||
Sbjct: 7421 caccattattggtcctcac 7403
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>gb|AE003449.2| Drosophila melanogaster chromosome X, section 33 of 74 of the complete
              sequence
          Length = 307201

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 28     gagatggaactgtcagcta 46
              |||||||||||||||||||
Sbjct: 135283 gagatggaactgtcagcta 135301


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,191,187
Number of Sequences: 3902068
Number of extensions: 1191187
Number of successful extensions: 80645
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80189
Number of HSP's gapped (non-prelim): 454
length of query: 163
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 141
effective length of database: 17,147,199,772
effective search space: 2417755167852
effective search space used: 2417755167852
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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