>RK40_SPIOL (P27684) 50S ribosomal protein L40, chloroplast precursor (CL40)|
          Length = 142

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 23/57 (40%), Positives = 32/57 (56%)
 Frame = +1

Query: 157 SIEDMPLQSKQQMILEQRARMXXXXXXXXXXXXXXXXXXXXXXGSWPPSKMKKLKNV 327
           S++++PL+SK Q+ LEQ+ +M                      G+WPPSKMKKLKNV
Sbjct: 86  SVQNLPLESKLQLKLEQKIKMKMAKKIRLRRTGLCAKESLRKRGAWPPSKMKKLKNV 142

>RK18_PEA (P11891) 50S ribosomal protein L18, chloroplast precursor (CL18)|
          Length = 145

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = +1

Query: 157 SIEDMPLQSKQQMILEQRARMXXXXXXXXXXXXXXXXXXXXXXGSWPPSKMKKLKNV 327
           S++ +PL+SK +   E+  +M                      G+WPPSKMKKL+ V
Sbjct: 89  SVDKLPLESKLKEREERMLKMKLAKKIRLKRKRLVQKRRLRKKGNWPPSKMKKLEGV 145

>RPOC2_LACSA (Q56P11) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6) (PEP)|
            (Plastid-encoded RNA polymerase beta'' subunit) (RNA
            polymerase beta'' subunit)
          Length = 1381

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 413  FPLYNFSVLKHIIGHNAI 466
            FP+YNF +  H+I HN I
Sbjct: 985  FPIYNFDLFSHLITHNQI 1002


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,330,977
Number of Sequences: 219361
Number of extensions: 1210949
Number of successful extensions: 2829
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2827
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)