| Clone Name | bags36k04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY106093.1| Zea mays PCO112665 mRNA sequence Length = 1087 Score = 515 bits (260), Expect = e-143 Identities = 555/651 (85%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 12 ggaaggactcgcagnacgtacgtgcagnatgaagcgcaaggcctgcgccgaggtcggcat 71 |||||||||||||| ||||||||| | |||||||||||||| ||||||||||||||||| Sbjct: 156 ggaaggactcgcag-acgtacgtgaa-catgaagcgcaaggcgtgcgccgaggtcggcat 213 Query: 72 ccgctccttcgacgtcgacctccccgaggacatctccgaggccgcgctcgtcgccgaggt 131 | ||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 214 ctgctccatcgacgtcgacctcccggaggacatctccgagaccgcgctcgtcgccgaggt 273 Query: 132 ccaccgcctcaacgccgaccccgccgtccacggtattcttgttcagcttccattgcccaa 191 || ||||||||||| ||||||||||| ||||| || ||||| ||||||||| | || || Sbjct: 274 tcatcgcctcaacgctgaccccgccgtgcacgggatccttgtccagcttccacttcctaa 333 Query: 192 gcatatcaacgaagaaattatattaaaccagatctccattgagaaagatgtcgatggttt 251 ||||||||||||||| | ||| | | | |||| ||||| ||||||||||| ||||| || Sbjct: 334 gcatatcaacgaagagaagatactgagcgagatttccatcgagaaagatgtggatggctt 393 Query: 252 tcatcctttgaacattggcaagctcgcaatgaaaggcagaaatccactgttcctaccttg 311 |||||| | |||||||||||||| ||||||||||||||| | ||||||||| |||| || Sbjct: 394 ccatcctctcaacattggcaagcttgcaatgaaaggcagagagccactgttcgtaccatg 453 Query: 312 taccccaaagggttgcatggagctcctgtcacgcagtggagtcactgtaaaaggaaagca 371 ||| |||||||| |||||||||||| ||||| | || ||||||||||| ||||| |||| Sbjct: 454 tacgccaaaggggtgcatggagctcttgtcaaggagcggagtcactgttaaaggtaagcg 513 Query: 372 cgcagttgtggttgggcgtagcaacatcgtgggtttaccagtatcccttctccttctgaa 431 |||||||||||||| || ||||||||||| || |||| |||||||| ||||||||||| Sbjct: 514 ggcagttgtggttggtcgcagcaacatcgtcgggctacctgtatccctgctccttctgaa 573 Query: 432 agcagacgctaccgtgtcgatcgtgcattcacggacgccaaatcccgaaacgattgtctg 491 ||||| || ||||| || | ||||| || ||||| || |||| |||| ||||| | Sbjct: 574 ggcagatgcgaccgtatctgttgtgcactcgcggacccctgatcctgaaagcattgtacg 633 Query: 492 tcaagcagacattgtcattgcagcagcaggccaggccatgatgatcaagggagactggat 551 |||| ||||| ||||| || ||||| || ||||| ||||||||||| || |||||||| Sbjct: 634 cgaagctgacatagtcatcgcggcagctgggcaggctatgatgatcaaaggtgactggat 693 Query: 552 caaaccaggcgcggcagtcatcgatgtcggtacaaactccatcgacgaccctaccaggaa 611 ||| ||||| || || |||||||||||||| || ||||||||||| ||||||||| |||| Sbjct: 694 caagccaggtgctgcggtcatcgatgtcgggacgaactccatcgatgaccctacccggaa 753 Query: 612 gtccgggtacaggctcgttggcgatgtggatttcgcggaggcaagcaaggt 662 |||||||||| ||||||| ||||||||||||||||| | ||| |||||||| Sbjct: 754 gtccgggtaccggctcgtcggcgatgtggatttcgcagcggcgagcaaggt 804
>dbj|AK103505.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131D02, full insert sequence Length = 1118 Score = 505 bits (255), Expect = e-140 Identities = 554/651 (85%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 12 ggaaggactcgcagnacgtacgtgcagnatgaagcgcaaggcctgcgccgaggtcggcat 71 |||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 241 ggaaggactcgcag-acgtacgtgcag-atgaagcgcaaggcgtgcgccgaggtcggcat 298 Query: 72 ccgctccttcgacgtcgacctccccgaggacatctccgaggccgcgctcgtcgccgaggt 131 ||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 299 ccgctccgtcgacgtcgacctcgccgaggacatctccgaggcggcgctcgtcgccgaggt 358 Query: 132 ccaccgcctcaacgccgaccccgccgtccacggtattcttgttcagcttccattgcccaa 191 ||||||||||||||||||||| |||||||| || || ||||| |||||||||||||| || Sbjct: 359 ccaccgcctcaacgccgacccagccgtccatggcatacttgtccagcttccattgccaaa 418 Query: 192 gcatatcaacgaagaaattatattaaaccagatctccattgagaaagatgtcgatggttt 251 |||||| || || |||| ||||| ||| ||||| | | ||||||||||| ||||| || Sbjct: 419 gcatattaatgaggaaaagatattgaacgagatcagcttagagaaagatgttgatgggtt 478 Query: 252 tcatcctttgaacattggcaagctcgcaatgaaaggcagaaatccactgttcctaccttg 311 |||||| |||| ||||||||||| ||||||||||||||| | |||||||||||||| || Sbjct: 479 ccatcctctgaatattggcaagcttgcaatgaaaggcagagacccactgttcctaccatg 538 Query: 312 taccccaaagggttgcatggagctcctgtcacgcagtggagtcactgtaaaaggaaagca 371 || || ||||| |||||||||||||| |||| || ||||| || | || || |||| Sbjct: 539 cacgccgaagggatgcatggagctcctaacacggagcggagttaccatcaatgggaagcg 598 Query: 372 cgcagttgtggttgggcgtagcaacatcgtgggtttaccagtatcccttctccttctgaa 431 || || |||||||| || |||||||| || || |||| |||||||| || |||||||| Sbjct: 599 agcggtcgtggttggccgcagcaacattgtcgggctacctgtatccctgcttcttctgaa 658 Query: 432 agcagacgctaccgtgtcgatcgtgcattcacggacgccaaatcccgaaacgattgtctg 491 || || || ||||| || || || || || ||||| ||||| || |||| |||||| | Sbjct: 659 ggcggatgcgaccgtatccattgttcactcccggaccccaaaccctgaaagtattgtccg 718 Query: 492 tcaagcagacattgtcattgcagcagcaggccaggccatgatgatcaagggagactggat 551 | |||||||||||||||||||||| || |||||||| ||||||||||| ||||||||||| Sbjct: 719 tgaagcagacattgtcattgcagcggctggccaggctatgatgatcaaaggagactggat 778 Query: 552 caaaccaggcgcggcagtcatcgatgtcggtacaaactccatcgacgaccctaccaggaa 611 |||||||||||| || |||||||| || || || ||||||||| ||||| |||||||| Sbjct: 779 caaaccaggcgctgctgtcatcgacgttgggacgaactccatcagtgacccaaccaggaa 838 Query: 612 gtccgggtacaggctcgttggcgatgtggatttcgcggaggcaagcaaggt 662 || |||||||| ||||| ||||||||||||||||| |||| |||||||| Sbjct: 839 atcggggtacagactcgtcggcgatgtggatttcgcagaggtgagcaaggt 889
>ref|XM_493923.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 876 Score = 446 bits (225), Expect = e-122 Identities = 547/651 (84%), Gaps = 5/651 (0%) Strand = Plus / Plus Query: 12 ggaaggactcgcagnacgtacgtgcagnatgaagcgcaaggcctgcgccgaggtcggcat 71 |||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 128 ggaaggactcgcag-acgtacgtgcag-atgaagcgcaaggcgtgcgccgaggtcggcat 185 Query: 72 ccgctccttcgacgtcgacctccccgaggacatctccgaggccgcgctcgtcgccgaggt 131 ||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 186 ccgctccgtcgacgtcgacctcgccgaggacatctccgaggcggcgctcgtcgccgaggt 245 Query: 132 ccaccgcctcaacgccgaccccgccgtccacggtattcttgttcagcttccattgcccaa 191 ||||||||||||||||||||| |||||||| || || ||||| |||||||||||||| || Sbjct: 246 ccaccgcctcaacgccgacccagccgtccatggcatacttgtccagcttccattgccaaa 305 Query: 192 gcatatcaacgaagaaattatattaaaccagatctccattgagaaagatgtcgatggttt 251 |||||| || || |||| ||||| ||| ||||| | | ||||||||||| ||||| || Sbjct: 306 gcatattaatgaggaaaagatattgaacgagatcagcttagagaaagatgttgatgggtt 365 Query: 252 tcatcctttgaacattggcaagctcgcaatgaaaggcagaaatccactgttcctaccttg 311 |||||| |||| ||||||||||| ||||||||||||||| | |||||||||||||| || Sbjct: 366 ccatcctctgaatattggcaagcttgcaatgaaaggcagagacccactgttcctaccatg 425 Query: 312 taccccaaagggttgcatggagctcctgtcacgcagtggagtcactgtaaaaggaaagca 371 || || ||||| |||||||||||||| |||| || ||||| || | || || |||| Sbjct: 426 cacgccgaagggatgcatggagctcctaacacggagcggagttaccatcaatgggaagcg 485 Query: 372 cgcagttgtggttgggcgtagcaacatcgtgggtttaccagtatcccttctccttctgaa 431 || || |||||||| || |||||||| || || |||| |||||||| || |||||||| Sbjct: 486 agcggtcgtggttggccgcagcaacattgtcgggctacctgtatccctgcttcttctgaa 545 Query: 432 agcagacgctaccgtgtcgatcgtgcattcacggacgccaaatcccgaaacgattgtctg 491 || || || ||||| || || || || || ||||| ||||| || |||| |||||| | Sbjct: 546 ggcggatgcgaccgtatccattgttcactcccggaccccaaaccctgaaagtattgtccg 605 Query: 492 tcaagcagacattgtcattgcagcagcaggccaggccatgatgatcaagggagactggat 551 | |||||||||||||||||||||| || |||||||| |||||| | | ||||||| Sbjct: 606 tgaagcagacattgtcattgcagcggctggccaggctatgatggtaca---ttactggat 662 Query: 552 caaaccaggcgcggcagtcatcgatgtcggtacaaactccatcgacgaccctaccaggaa 611 |||||||||||| || |||||||| || || || ||||||||| ||||| |||||||| Sbjct: 663 caaaccaggcgctgctgtcatcgacgttgggacgaactccatcagtgacccaaccaggaa 722 Query: 612 gtccgggtacaggctcgttggcgatgtggatttcgcggaggcaagcaaggt 662 || |||||||| ||||| ||||||||||||||||| |||| |||||||| Sbjct: 723 atcggggtacagactcgtcggcgatgtggatttcgcagaggtgagcaaggt 773
>gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0001A07, complete sequence Length = 164898 Score = 230 bits (116), Expect = 5e-57 Identities = 148/156 (94%), Gaps = 2/156 (1%) Strand = Plus / Plus Query: 12 ggaaggactcgcagnacgtacgtgcagnatgaagcgcaaggcctgcgccgaggtcggcat 71 |||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 60318 ggaaggactcgcag-acgtacgtgcag-atgaagcgcaaggcgtgcgccgaggtcggcat 60375 Query: 72 ccgctccttcgacgtcgacctccccgaggacatctccgaggccgcgctcgtcgccgaggt 131 ||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 60376 ccgctccgtcgacgtcgacctcgccgaggacatctccgaggcggcgctcgtcgccgaggt 60435 Query: 132 ccaccgcctcaacgccgaccccgccgtccacggtat 167 ||||||||||||||||||||| |||||||| ||||| Sbjct: 60436 ccaccgcctcaacgccgacccagccgtccatggtat 60471 Score = 113 bits (57), Expect = 8e-22 Identities = 111/129 (86%) Strand = Plus / Plus Query: 534 gatcaagggagactggatcaaaccaggcgcggcagtcatcgatgtcggtacaaactccat 593 |||||| ||||||||||||||||||||||| || |||||||| || || || |||||||| Sbjct: 61940 gatcaaaggagactggatcaaaccaggcgctgctgtcatcgacgttgggacgaactccat 61999 Query: 594 cgacgaccctaccaggaagtccgggtacaggctcgttggcgatgtggatttcgcggaggc 653 | ||||| |||||||| || |||||||| ||||| ||||||||||||||||| |||| Sbjct: 62000 cagtgacccaaccaggaaatcggggtacagactcgtcggcgatgtggatttcgcagaggt 62059 Query: 654 aagcaaggt 662 |||||||| Sbjct: 62060 gagcaaggt 62068 Score = 111 bits (56), Expect = 3e-21 Identities = 119/140 (85%) Strand = Plus / Plus Query: 169 cttgttcagcttccattgcccaagcatatcaacgaagaaattatattaaaccagatctcc 228 ||||| |||||||||||||| |||||||| || || |||| ||||| ||| ||||| | Sbjct: 61407 cttgtccagcttccattgccaaagcatattaatgaggaaaagatattgaacgagatcagc 61466 Query: 229 attgagaaagatgtcgatggttttcatcctttgaacattggcaagctcgcaatgaaaggc 288 | ||||||||||| ||||| || |||||| |||| ||||||||||| |||||||||||| Sbjct: 61467 ttagagaaagatgttgatgggttccatcctctgaatattggcaagcttgcaatgaaaggc 61526 Query: 289 agaaatccactgttcctacc 308 ||| | |||||||||||||| Sbjct: 61527 agagacccactgttcctacc 61546 Score = 79.8 bits (40), Expect = 1e-11 Identities = 127/156 (81%) Strand = Plus / Plus Query: 379 gtggttgggcgtagcaacatcgtgggtttaccagtatcccttctccttctgaaagcagac 438 |||||||| || |||||||| || || |||| |||||||| || |||||||| || || Sbjct: 61703 gtggttggccgcagcaacattgtcgggctacctgtatccctgcttcttctgaaggcggat 61762 Query: 439 gctaccgtgtcgatcgtgcattcacggacgccaaatcccgaaacgattgtctgtcaagca 498 || ||||| || || || || || ||||| ||||| || |||| |||||| || ||||| Sbjct: 61763 gcgaccgtatccattgttcactcccggaccccaaaccctgaaagtattgtccgtgaagca 61822 Query: 499 gacattgtcattgcagcagcaggccaggccatgatg 534 ||||||||||||||||| || |||||||| |||||| Sbjct: 61823 gacattgtcattgcagcggctggccaggctatgatg 61858
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 230 bits (116), Expect = 5e-57 Identities = 148/156 (94%), Gaps = 2/156 (1%) Strand = Plus / Minus Query: 12 ggaaggactcgcagnacgtacgtgcagnatgaagcgcaaggcctgcgccgaggtcggcat 71 |||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 1197 ggaaggactcgcag-acgtacgtgcag-atgaagcgcaaggcgtgcgccgaggtcggcat 1140 Query: 72 ccgctccttcgacgtcgacctccccgaggacatctccgaggccgcgctcgtcgccgaggt 131 ||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 1139 ccgctccgtcgacgtcgacctcgccgaggacatctccgaggcggcgctcgtcgccgaggt 1080 Query: 132 ccaccgcctcaacgccgaccccgccgtccacggtat 167 ||||||||||||||||||||| |||||||| ||||| Sbjct: 1079 ccaccgcctcaacgccgacccagccgtccatggtat 1044 Score = 69.9 bits (35), Expect = 1e-08 Identities = 89/107 (83%) Strand = Plus / Minus Query: 169 cttgttcagcttccattgcccaagcatatcaacgaagaaattatattaaaccagatctcc 228 ||||| |||||||||||||| |||||||| || || |||| ||||| ||| ||||| | Sbjct: 108 cttgtccagcttccattgccaaagcatattaatgaggaaaagatattgaacgagatcagc 49 Query: 229 attgagaaagatgtcgatggttttcatcctttgaacattggcaagct 275 | ||||||||||| ||||| || |||||| |||| ||||||||||| Sbjct: 48 ttagagaaagatgttgatgggttccatcctctgaatattggcaagct 2
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 230 bits (116), Expect = 5e-57 Identities = 148/156 (94%), Gaps = 2/156 (1%) Strand = Plus / Plus Query: 12 ggaaggactcgcagnacgtacgtgcagnatgaagcgcaaggcctgcgccgaggtcggcat 71 |||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 2865707 ggaaggactcgcag-acgtacgtgcag-atgaagcgcaaggcgtgcgccgaggtcggcat 2865764 Query: 72 ccgctccttcgacgtcgacctccccgaggacatctccgaggccgcgctcgtcgccgaggt 131 ||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 2865765 ccgctccgtcgacgtcgacctcgccgaggacatctccgaggcggcgctcgtcgccgaggt 2865824 Query: 132 ccaccgcctcaacgccgaccccgccgtccacggtat 167 ||||||||||||||||||||| |||||||| ||||| Sbjct: 2865825 ccaccgcctcaacgccgacccagccgtccatggtat 2865860 Score = 113 bits (57), Expect = 8e-22 Identities = 111/129 (86%) Strand = Plus / Plus Query: 534 gatcaagggagactggatcaaaccaggcgcggcagtcatcgatgtcggtacaaactccat 593 |||||| ||||||||||||||||||||||| || |||||||| || || || |||||||| Sbjct: 2867329 gatcaaaggagactggatcaaaccaggcgctgctgtcatcgacgttgggacgaactccat 2867388 Query: 594 cgacgaccctaccaggaagtccgggtacaggctcgttggcgatgtggatttcgcggaggc 653 | ||||| |||||||| || |||||||| ||||| ||||||||||||||||| |||| Sbjct: 2867389 cagtgacccaaccaggaaatcggggtacagactcgtcggcgatgtggatttcgcagaggt 2867448 Query: 654 aagcaaggt 662 |||||||| Sbjct: 2867449 gagcaaggt 2867457 Score = 111 bits (56), Expect = 3e-21 Identities = 119/140 (85%) Strand = Plus / Plus Query: 169 cttgttcagcttccattgcccaagcatatcaacgaagaaattatattaaaccagatctcc 228 ||||| |||||||||||||| |||||||| || || |||| ||||| ||| ||||| | Sbjct: 2866796 cttgtccagcttccattgccaaagcatattaatgaggaaaagatattgaacgagatcagc 2866855 Query: 229 attgagaaagatgtcgatggttttcatcctttgaacattggcaagctcgcaatgaaaggc 288 | ||||||||||| ||||| || |||||| |||| ||||||||||| |||||||||||| Sbjct: 2866856 ttagagaaagatgttgatgggttccatcctctgaatattggcaagcttgcaatgaaaggc 2866915 Query: 289 agaaatccactgttcctacc 308 ||| | |||||||||||||| Sbjct: 2866916 agagacccactgttcctacc 2866935 Score = 79.8 bits (40), Expect = 1e-11 Identities = 127/156 (81%) Strand = Plus / Plus Query: 379 gtggttgggcgtagcaacatcgtgggtttaccagtatcccttctccttctgaaagcagac 438 |||||||| || |||||||| || || |||| |||||||| || |||||||| || || Sbjct: 2867092 gtggttggccgcagcaacattgtcgggctacctgtatccctgcttcttctgaaggcggat 2867151 Query: 439 gctaccgtgtcgatcgtgcattcacggacgccaaatcccgaaacgattgtctgtcaagca 498 || ||||| || || || || || ||||| ||||| || |||| |||||| || ||||| Sbjct: 2867152 gcgaccgtatccattgttcactcccggaccccaaaccctgaaagtattgtccgtgaagca 2867211 Query: 499 gacattgtcattgcagcagcaggccaggccatgatg 534 ||||||||||||||||| || |||||||| |||||| Sbjct: 2867212 gacattgtcattgcagcggctggccaggctatgatg 2867247
>dbj|AK104502.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F01, full insert sequence Length = 1209 Score = 113 bits (57), Expect = 8e-22 Identities = 111/129 (86%) Strand = Plus / Plus Query: 534 gatcaagggagactggatcaaaccaggcgcggcagtcatcgatgtcggtacaaactccat 593 |||||| ||||||||||||||||||||||| || |||||||| || || || |||||||| Sbjct: 852 gatcaaaggagactggatcaaaccaggcgctgctgtcatcgacgttgggacgaactccat 911 Query: 594 cgacgaccctaccaggaagtccgggtacaggctcgttggcgatgtggatttcgcggaggc 653 | ||||| |||||||| || |||||||| ||||| ||||||||||||||||| |||| Sbjct: 912 cagtgacccaaccaggaaatcggggtacagactcgtcggcgatgtggatttcgcagaggt 971 Query: 654 aagcaaggt 662 |||||||| Sbjct: 972 gagcaaggt 980 Score = 111 bits (56), Expect = 3e-21 Identities = 119/140 (85%) Strand = Plus / Plus Query: 169 cttgttcagcttccattgcccaagcatatcaacgaagaaattatattaaaccagatctcc 228 ||||| |||||||||||||| |||||||| || || |||| ||||| ||| ||||| | Sbjct: 319 cttgtccagcttccattgccaaagcatattaatgaggaaaagatattgaacgagatcagc 378 Query: 229 attgagaaagatgtcgatggttttcatcctttgaacattggcaagctcgcaatgaaaggc 288 | ||||||||||| ||||| || |||||| |||| ||||||||||| |||||||||||| Sbjct: 379 ttagagaaagatgttgatgggttccatcctctgaatattggcaagcttgcaatgaaaggc 438 Query: 289 agaaatccactgttcctacc 308 ||| | |||||||||||||| Sbjct: 439 agagacccactgttcctacc 458 Score = 79.8 bits (40), Expect = 1e-11 Identities = 127/156 (81%) Strand = Plus / Plus Query: 379 gtggttgggcgtagcaacatcgtgggtttaccagtatcccttctccttctgaaagcagac 438 |||||||| || |||||||| || || |||| |||||||| || |||||||| || || Sbjct: 615 gtggttggccgcagcaacattgtcgggctacctgtatccctgcttcttctgaaggcggat 674 Query: 439 gctaccgtgtcgatcgtgcattcacggacgccaaatcccgaaacgattgtctgtcaagca 498 || ||||| || || || || || ||||| ||||| || |||| |||||| || ||||| Sbjct: 675 gcgaccgtatccattgttcactcccggaccccaaaccctgaaagtattgtccgtgaagca 734 Query: 499 gacattgtcattgcagcagcaggccaggccatgatg 534 ||||||||||||||||| || |||||||| |||||| Sbjct: 735 gacattgtcattgcagcggctggccaggctatgatg 770
>dbj|AK060882.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A12, full insert sequence Length = 1209 Score = 113 bits (57), Expect = 8e-22 Identities = 111/129 (86%) Strand = Plus / Plus Query: 534 gatcaagggagactggatcaaaccaggcgcggcagtcatcgatgtcggtacaaactccat 593 |||||| ||||||||||||||||||||||| || |||||||| || || || |||||||| Sbjct: 852 gatcaaaggagactggatcaaaccaggcgctgctgtcatcgacgttgggacgaactccat 911 Query: 594 cgacgaccctaccaggaagtccgggtacaggctcgttggcgatgtggatttcgcggaggc 653 | ||||| |||||||| || |||||||| ||||| ||||||||||||||||| |||| Sbjct: 912 cagtgacccaaccaggaaatcggggtacagactcgtcggcgatgtggatttcgcagaggt 971 Query: 654 aagcaaggt 662 |||||||| Sbjct: 972 gagcaaggt 980 Score = 111 bits (56), Expect = 3e-21 Identities = 119/140 (85%) Strand = Plus / Plus Query: 169 cttgttcagcttccattgcccaagcatatcaacgaagaaattatattaaaccagatctcc 228 ||||| |||||||||||||| |||||||| || || |||| ||||| ||| ||||| | Sbjct: 319 cttgtccagcttccattgccaaagcatattaatgaggaaaagatattgaacgagatcagc 378 Query: 229 attgagaaagatgtcgatggttttcatcctttgaacattggcaagctcgcaatgaaaggc 288 | ||||||||||| ||||| || |||||| |||| ||||||||||| |||||||||||| Sbjct: 379 ttagagaaagatgttgatgggttccatcctctgaatattggcaagcttgcaatgaaaggc 438 Query: 289 agaaatccactgttcctacc 308 ||| | |||||||||||||| Sbjct: 439 agagacccactgttcctacc 458 Score = 79.8 bits (40), Expect = 1e-11 Identities = 127/156 (81%) Strand = Plus / Plus Query: 379 gtggttgggcgtagcaacatcgtgggtttaccagtatcccttctccttctgaaagcagac 438 |||||||| || |||||||| || || |||| |||||||| || |||||||| || || Sbjct: 615 gtggttggccgcagcaacattgtcgggctacctgtatccctgcttcttctgaaggcggat 674 Query: 439 gctaccgtgtcgatcgtgcattcacggacgccaaatcccgaaacgattgtctgtcaagca 498 || ||||| || || || || || ||||| ||||| || |||| |||||| || ||||| Sbjct: 675 gcgaccgtatccattgttcactcccggaccccaaaccctgaaagtattgtccgtgaagca 734 Query: 499 gacattgtcattgcagcagcaggccaggccatgatg 534 ||||||||||||||||| || |||||||| |||||| Sbjct: 735 gacattgtcattgcagcggctggccaggctatgatg 770
>ref|NM_112065.2| Arabidopsis thaliana catalytic AT3G12290 mRNA, complete cds Length = 1182 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 228 cattgagaaagatgtcgatggttttcatcctttgaacattggcaagctcgcaatgaaagg 287 |||||| |||||||||||||| || ||||||||||| ||||| ||||| || |||||||| Sbjct: 452 cattgataaagatgtcgatggcttccatcctttgaatattggtaagctagccatgaaagg 511 Query: 288 cagaaatccactgttcctaccttgtaccccaaaggg 323 |||| | || || ||||| ||||| ||||||||||| Sbjct: 512 cagagaacccctcttccttccttgcaccccaaaggg 547
>emb|BX824723.1|CNS0A5N1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH68ZA04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 995 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 228 cattgagaaagatgtcgatggttttcatcctttgaacattggcaagctcgcaatgaaagg 287 |||||| |||||||||||||| || ||||||||||| ||||| ||||| || |||||||| Sbjct: 395 cattgataaagatgtcgatggcttccatcctttgaatattggtaagctagccatgaaagg 454 Query: 288 cagaaatccactgttcctaccttgtaccccaaaggg 323 |||| | || || ||||| ||||| ||||||||||| Sbjct: 455 cagagaacccctcttccttccttgcaccccaaaggg 490
>emb|BX824645.1|CNS0A5KE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZH12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 984 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 228 cattgagaaagatgtcgatggttttcatcctttgaacattggcaagctcgcaatgaaagg 287 |||||| |||||||||||||| || ||||||||||| ||||| ||||| || |||||||| Sbjct: 364 cattgataaagatgtcgatggcttccatcctttgaatattggtaagctagccatgaaagg 423 Query: 288 cagaaatccactgttcctaccttgtaccccaaaggg 323 |||| | || || ||||| ||||| ||||||||||| Sbjct: 424 cagagaacccctcttccttccttgcaccccaaaggg 459
>gb|BT004612.1| Arabidopsis thaliana At3g12290 gene, complete cds Length = 900 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 228 cattgagaaagatgtcgatggttttcatcctttgaacattggcaagctcgcaatgaaagg 287 |||||| |||||||||||||| || ||||||||||| ||||| ||||| || |||||||| Sbjct: 363 cattgataaagatgtcgatggcttccatcctttgaatattggtaagctagccatgaaagg 422 Query: 288 cagaaatccactgttcctaccttgtaccccaaaggg 323 |||| | || || ||||| ||||| ||||||||||| Sbjct: 423 cagagaacccctcttccttccttgcaccccaaaggg 458
>gb|AY085538.1| Arabidopsis thaliana clone 156450 mRNA, complete sequence Length = 1182 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 228 cattgagaaagatgtcgatggttttcatcctttgaacattggcaagctcgcaatgaaagg 287 |||||| |||||||||||||| || ||||||||||| ||||| ||||| || |||||||| Sbjct: 452 cattgataaagatgtcgatggcttccatcctttgaatattggtaagctagccatgaaagg 511 Query: 288 cagaaatccactgttcctaccttgtaccccaaaggg 323 |||| | || || ||||| ||||| ||||||||||| Sbjct: 512 cagagaacccctcttccttccttgcaccccaaaggg 547
>gb|AC069472.1|AC069472 Arabidopsis thaliana chromosome 3 BAC F28J15 genomic sequence, complete sequence Length = 52211 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 228 cattgagaaagatgtcgatggttttcatcctttgaacattggcaagctcgcaatgaaagg 287 |||||| |||||||||||||| || ||||||||||| ||||| ||||| || |||||||| Sbjct: 45255 cattgataaagatgtcgatggcttccatcctttgaatattggtaagctagccatgaaagg 45314 Query: 288 cagaaatccactgttcctaccttgtaccccaaagg 322 |||| | || || ||||| ||||| |||||||||| Sbjct: 45315 cagagaacccctcttccttccttgcaccccaaagg 45349
>dbj|AP002047.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MQC3 Length = 86536 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 228 cattgagaaagatgtcgatggttttcatcctttgaacattggcaagctcgcaatgaaagg 287 |||||| |||||||||||||| || ||||||||||| ||||| ||||| || |||||||| Sbjct: 34245 cattgataaagatgtcgatggcttccatcctttgaatattggtaagctagccatgaaagg 34304 Query: 288 cagaaatccactgttcctaccttgtaccccaaagg 322 |||| | || || ||||| ||||| |||||||||| Sbjct: 34305 cagagaacccctcttccttccttgcaccccaaagg 34339
>gb|AF439726.1|AF439726 Zea mays methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cylcohydrolase isoform 3 mRNA, partial cds Length = 480 Score = 79.8 bits (40), Expect = 1e-11 Identities = 88/104 (84%) Strand = Plus / Plus Query: 232 gagaaagatgtcgatggttttcatcctttgaacattggcaagctcgcaatgaaaggcaga 291 ||||| ||||| || || ||||||||| |||| ||||||||||| ||||||||||||||| Sbjct: 1 gagaaggatgtggacgggtttcatcctctgaatattggcaagcttgcaatgaaaggcaga 60 Query: 292 aatccactgttcctaccttgtaccccaaagggttgcatggagct 335 | || |||||||| ||||| || || ||||| ||||| ||||| Sbjct: 61 caacccctgttcctcccttgcacgcccaagggatgcatcgagct 104 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 373 gcagttgtggttgggcgtagcaacatcgtgggtttaccagtatcccttctccttctgaa 431 |||||||||||||| || || ||||| || || |||||||| || || ||||||||||| Sbjct: 142 gcagttgtggttggtcgaagtaacattgttggattaccagtgtctctgctccttctgaa 200
>emb|AJ011589.1|PSA011589 Pisum sativum mRNA for bifunctional 5,10-methylene- tetrahydrofolate dehydrogenase and 5,10-methenyltetrahydrofolate cyclohydrolase protein Length = 1219 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 494 aagcagacattgtcattgcagcagcaggccaggccatgatgatcaagggagactggatca 553 ||||||| ||||| |||||||||||||| ||||| | ||||||||||||| |||||| | Sbjct: 675 aagcagatattgttattgcagcagcaggacaggcaaagatgatcaagggaagctggataa 734 Query: 554 aaccaggcgcggcagtcatcgatgtcggtacaaa 587 ||||||| || ||||| || ||||| || ||||| Sbjct: 735 aaccaggagctgcagtgatagatgttggcacaaa 768 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 238 gatgtcgatggttttcatcctttgaacattggcaagctcgcaatgaaagg 287 ||||| ||||| || ||||| ||||||||||||||||| ||||||||||| Sbjct: 419 gatgtagatggcttccatcccttgaacattggcaagcttgcaatgaaagg 468
>gb|AF030516.1|AF030516 Pisum sativum 5,10-methylenetetrahydrofolate dehydrogenase-5,10-methenyltetrahydrofolate cyclohydrolase mRNA, complete cds Length = 1219 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 494 aagcagacattgtcattgcagcagcaggccaggccatgatgatcaagggagactggatca 553 ||||||| ||||| |||||||||||||| ||||| | ||||||||||||| |||||| | Sbjct: 675 aagcagatattgttattgcagcagcaggacaggcaaagatgatcaagggaagctggataa 734 Query: 554 aaccaggcgcggcagtcatcgatgtcggtacaaa 587 ||||||| || ||||| || ||||| || ||||| Sbjct: 735 aaccaggagctgcagtgatagatgttggcacaaa 768 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 238 gatgtcgatggttttcatcctttgaacattggcaagctcgcaatgaaagg 287 ||||| ||||| || ||||| ||||||||||||||||| ||||||||||| Sbjct: 419 gatgtagatggcttccatcccttgaacattggcaagcttgcaatgaaagg 468
>gb|AF439724.1|AF439724 Zea mays methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cylcohydrolase isoform 1 mRNA, partial cds Length = 480 Score = 71.9 bits (36), Expect = 3e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 232 gagaaagatgtcgatggttttcatcctttgaacattggcaagctcgcaatgaaaggcaga 291 ||||| ||||| || || ||||||||| |||| ||||||||||| ||||||||||||||| Sbjct: 1 gagaaggatgtggacggctttcatcctctgaatattggcaagcttgcaatgaaaggcaga 60 Query: 292 aatccactgttcctaccttgtaccccaaagggttgcatggagct 335 | || ||||||| ||||| || || ||||| ||||| ||||| Sbjct: 61 caacccttgttcctcccttgcacgcccaagggatgcattgagct 104 Score = 56.0 bits (28), Expect = 2e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 494 aagcagacattgtcattgcagcagcaggccaggccatgatgatcaagggagactggatca 553 ||||||||||| | ||||| || ||||| ||||| ||||||||||| || |||||||| Sbjct: 263 aagcagacattattattgctgccgcaggacaggctatgatgatcaaaggcagctggatca 322 Query: 554 aaccaggcgcggcagt 569 |||| ||||| ||||| Sbjct: 323 aacctggcgctgcagt 338
>emb|BX825469.1|CNS0A51S Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL39ZA11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1004 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 228 cattgagaaagatgtcgatggttttcatcctttgaacattggcaagctcgcaatgaaagg 287 |||||| |||||||||||||| || ||||||||||| ||||| ||||| || |||||||| Sbjct: 394 cattgataaagatgtcgatggcttccatcctttgaatattggtaagctagccatgaaagg 453 Query: 288 caga 291 |||| Sbjct: 454 caga 457
>gb|AY486855.1| Hevea brasiliensis clone mHbCIRa36 microsatellite sequence Length = 603 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 376 gttgtggttgggcgtagcaacatcgtgggtttaccagtatcccttctccttctgaaagca 435 ||||| ||||| ||||||||||| || || |||||||| || || || |||||||||||| Sbjct: 269 gttgttgttggccgtagcaacatagttggattaccagtgtcactgctgcttctgaaagca 328 Query: 436 ga 437 || Sbjct: 329 ga 330
>dbj|AB236821.1| Trifolium pratense RNA for putative tetrahydrofolate synthase, complete cds, clone: C2147 Length = 1526 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 229 attgagaaagatgtcgatggttttcatcctttgaacattgg 269 |||||||| ||||| |||||||||||||| ||||| ||||| Sbjct: 622 attgagaaggatgtagatggttttcatccattgaatattgg 662
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 107 ccgaggccgcgctcgtcgccgaggtccaccgcc 139 |||||||||||| | |||||||||||||||||| Sbjct: 1464429 ccgaggccgcgcgcctcgccgaggtccaccgcc 1464397 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 112 gccgcgctcgtcgccgaggtccaccgcctc 141 |||||||||| | ||||||||||||||||| Sbjct: 4146683 gccgcgctcgaccccgaggtccaccgcctc 4146712
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 235 aaagatgtcgatggttttcatcct 258 |||||||||||||||||||||||| Sbjct: 2039701 aaagatgtcgatggttttcatcct 2039724
>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome Length = 1895994 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 235 aaagatgtcgatggttttcatcct 258 |||||||||||||||||||||||| Sbjct: 363901 aaagatgtcgatggttttcatcct 363924
>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome Length = 1892819 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 235 aaagatgtcgatggttttcatcct 258 |||||||||||||||||||||||| Sbjct: 900593 aaagatgtcgatggttttcatcct 900616
>gb|AY871996.1| Synthetic construct hypothetical protein (FTT0892) gene, complete cds Length = 954 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 235 aaagatgtcgatggttttcatcct 258 |||||||||||||||||||||||| Sbjct: 424 aaagatgtcgatggttttcatcct 447
>gb|BT014115.1| Lycopersicon esculentum clone 133219F, mRNA sequence Length = 1588 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 158 tccacggtattcttgttcagcttccattgcc 188 |||||||||||||||| |||||||| ||||| Sbjct: 501 tccacggtattcttgtgcagcttcctttgcc 531
>dbj|AP006402.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34J23, TM0284, complete sequence Length = 92675 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 229 attgagaaagatgtcgatggttttcatcctttgaa 263 |||||||| ||||| |||||||||||||| ||||| Sbjct: 19022 attgagaaggatgtagatggttttcatccattgaa 18988
>dbj|AP006092.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT21D16, TM0157b, complete sequence Length = 28160 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 229 attgagaaagatgtcgatggttttcatcctttgaa 263 |||||||| ||||| |||||||||||||| ||||| Sbjct: 15711 attgagaaggatgtagatggttttcatccattgaa 15745
>ref|XM_547891.2| PREDICTED: Canis familiaris similar to papilin (LOC490769), mRNA Length = 3756 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 511 gcagcagcaggccaggccatga 532 |||||||||||||||||||||| Sbjct: 2648 gcagcagcaggccaggccatga 2669
>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome Length = 1485148 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 235 aaagatgtcgatggttttcatccttt 260 |||||| ||||||||||||||||||| Sbjct: 756860 aaagatatcgatggttttcatccttt 756835
>gb|AC123899.15| Medicago truncatula clone mth2-33n6, complete sequence Length = 127126 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 232 gagaaagatgtcgatggttttcatcctttgaacattgg 269 ||||| ||||| |||||||||||||| ||||| ||||| Sbjct: 123382 gagaaggatgtagatggttttcatccattgaatattgg 123419
>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome Length = 1522076 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 235 aaagatgtcgatggttttcatccttt 260 |||||||| ||||||||||||||||| Sbjct: 1077269 aaagatgttgatggttttcatccttt 1077294
>gb|AC148817.3| Medicago truncatula chromosome 7 BAC clone mth2-22c10, complete sequence Length = 123020 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 232 gagaaagatgtcgatggttttcatcctttgaacattgg 269 ||||| ||||| |||||||||||||| ||||| ||||| Sbjct: 15579 gagaaggatgtagatggttttcatccattgaatattgg 15616
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 94 cccgaggacatctccgaggccgcgct 119 |||||||||||| ||||||||||||| Sbjct: 4163626 cccgaggacatcaccgaggccgcgct 4163651 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 gcctgcgccgaggtcggcatccgct 76 ||||||||||||||||||| ||||| Sbjct: 625262 gcctgcgccgaggtcggcacccgct 625238 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 aggcctgcgccgaggtcggc 69 |||||||||||||||||||| Sbjct: 3871132 aggcctgcgccgaggtcggc 3871113
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 gctcgtcgccgaggtccaccgc 138 |||||||||||||||||||||| Sbjct: 12458433 gctcgtcgccgaggtccaccgc 12458412
>dbj|AP004750.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0421H01 Length = 142638 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 gctcgtcgccgaggtccaccgc 138 |||||||||||||||||||||| Sbjct: 32167 gctcgtcgccgaggtccaccgc 32146
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Minus Query: 161 acggtattcttgttcagcttccattgcccaagca 194 |||||||||| |||||||||||| |||| ||||| Sbjct: 1971821 acggtattctggttcagcttccactgccgaagca 1971788
>ref|XM_368230.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG01014.4) partial mRNA Length = 3189 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 158 tccacggtattcttgttcagcttccattgcccaagca 194 |||||||| | ||||||||||| |||||||| ||||| Sbjct: 644 tccacggtgtccttgttcagctaccattgccaaagca 680
>gb|AE006230.1| Pasteurella multocida subsp. multocida str. Pm70 section 197 of 204 of the complete genome Length = 10325 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aaagatgtcgatggttttcatcctt 259 |||||||| |||||||||||||||| Sbjct: 3559 aaagatgtagatggttttcatcctt 3583
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aaagatgtcgatggttttcatcctt 259 |||||||| |||||||||||||||| Sbjct: 2184677 aaagatgtagatggttttcatcctt 2184701
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aaagatgtcgatggttttcatcctt 259 |||||||||||||| |||||||||| Sbjct: 2978700 aaagatgtcgatggatttcatcctt 2978724
>ref|XM_506064.1| Yarrowia lipolytica CLIB122, YALI0F30745g predicted mRNA Length = 3021 Score = 42.1 bits (21), Expect = 2.3 Identities = 42/49 (85%) Strand = Plus / Plus Query: 155 ccgtccacggtattcttgttcagcttccattgcccaagcatatcaacga 203 |||| |||||||||||||| ||||| || | |||||||| |||||||| Sbjct: 470 ccgttcacggtattcttgtccagctgcctcttcccaagcacatcaacga 518
>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16 Length = 348971 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 gcctgcgccgaggtcggcatccgct 76 ||||| ||||||||||||||||||| Sbjct: 186384 gcctgggccgaggtcggcatccgct 186408
>gb|AE013218.1| Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome Length = 641454 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aaagatgtcgatggttttcatcctt 259 |||||||| |||||||||||||||| Sbjct: 537181 aaagatgtagatggttttcatcctt 537205
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 523 caggccatgatgatcaaggga 543 ||||||||||||||||||||| Sbjct: 454311 caggccatgatgatcaaggga 454291
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 151 cccgccgtccacggtattcttgttcagct 179 |||||||| |||||||||||||| ||||| Sbjct: 590116 cccgccgtgcacggtattcttgtccagct 590088
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 42.1 bits (21), Expect = 2.3 Identities = 42/49 (85%) Strand = Plus / Minus Query: 155 ccgtccacggtattcttgttcagcttccattgcccaagcatatcaacga 203 |||| |||||||||||||| ||||| || | |||||||| |||||||| Sbjct: 3838817 ccgttcacggtattcttgtccagctgcctcttcccaagcacatcaacga 3838769
>gb|AC103368.7| Mus musculus chromosome 18, clone RP24-131L2, complete sequence Length = 160855 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 atgaaaggcagaaatccact 299 |||||||||||||||||||| Sbjct: 44555 atgaaaggcagaaatccact 44536
>ref|XM_633076.1| Dictyostelium discoideum hypothetical protein (DDB0186614), partial mRNA Length = 1665 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 agaaattatattaaaccaga 223 |||||||||||||||||||| Sbjct: 106 agaaattatattaaaccaga 125
>ref|XM_483820.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2982 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cgaggccgcgctcgtcgccg 127 |||||||||||||||||||| Sbjct: 842 cgaggccgcgctcgtcgccg 861
>ref|XM_483819.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4195 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cgaggccgcgctcgtcgccg 127 |||||||||||||||||||| Sbjct: 2060 cgaggccgcgctcgtcgccg 2079
>ref|XM_483818.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3129 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cgaggccgcgctcgtcgccg 127 |||||||||||||||||||| Sbjct: 2002 cgaggccgcgctcgtcgccg 2021
>gb|BC082827.1| Xenopus laevis kinesine, mRNA (cDNA clone MGC:80002 IMAGE:5049026), complete cds Length = 3613 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 582 tacaaactccatcgacgacc 601 |||||||||||||||||||| Sbjct: 1788 tacaaactccatcgacgacc 1807
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 gcctcaacgccgaccccgccgtcc 160 ||||| |||||||||||||||||| Sbjct: 2652775 gcctcgacgccgaccccgccgtcc 2652798
>gb|BC042218.1| Xenopus laevis similar to kinesin-like 1, mRNA (cDNA clone MGC:52588 IMAGE:5570491), complete cds Length = 3684 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 582 tacaaactccatcgacgacc 601 |||||||||||||||||||| Sbjct: 1845 tacaaactccatcgacgacc 1864
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 ggccgcgctcgtcgccgagg 130 |||||||||||||||||||| Sbjct: 1153578 ggccgcgctcgtcgccgagg 1153559
>emb|X79863.1|XSDNAFR Xanthobacter sp. DNA fragment Length = 6975 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ccccgaggacatctccgaggccgc 116 ||||||||||||| |||||||||| Sbjct: 5346 ccccgaggacatcgccgaggccgc 5369
>emb|X71864.1|XLKLP X.laevis mRNA for kinesin-like protein Length = 3420 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 582 tacaaactccatcgacgacc 601 |||||||||||||||||||| Sbjct: 1825 tacaaactccatcgacgacc 1844
>emb|X54002.1|XLKINESIN X.laevis mRNA for kinesine Length = 3651 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 582 tacaaactccatcgacgacc 601 |||||||||||||||||||| Sbjct: 1861 tacaaactccatcgacgacc 1880
>gb|U13043.2|PFU13043 Propionibacterium freudenreichii subsp. shermanii cobalt transport protein CbiM (cbiM), cobalt transport protein CbiN (cbiN), cobalt transport protein CbiQ (cbiQ), membrane associated cobalt transport protein CbiO (cbiO), and uroporphyrinogen III methyltransferase (cobA) genes, complete cds Length = 4782 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 aggcctgcgccgaggtcggcatcc 73 ||||||||||||||| |||||||| Sbjct: 3820 aggcctgcgccgaggccggcatcc 3843
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 9.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 531 gatgatcaagggagactggatcaaaccaggcgcggcagtcatcgatgt 578 |||||||||||| |||||||| || || ||||| | ||||||||||| Sbjct: 4778883 gatgatcaagggcgactggattaagccgggcgccacggtcatcgatgt 4778836
>gb|AE009934.1|AE009934 Pyrobaculum aerophilum strain IM2 section 189 of 201 of the complete genome Length = 10514 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 cgacgtcgacctccccgagg 100 |||||||||||||||||||| Sbjct: 1081 cgacgtcgacctccccgagg 1062
>gb|AC009383.8| Drosophila melanogaster 3L BAC RP98-31C3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179283 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 495 agcagacattgtcattgcagcagc 518 ||||| |||||||||||||||||| Sbjct: 78388 agcagtcattgtcattgcagcagc 78365
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 acaggctcgttggcgatgtg 639 |||||||||||||||||||| Sbjct: 3051963 acaggctcgttggcgatgtg 3051982 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 acaggctcgttggcgatgtg 639 |||||||||||||||||||| Sbjct: 346834 acaggctcgttggcgatgtg 346853
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cgaggccgcgctcgtcgccg 127 |||||||||||||||||||| Sbjct: 28260542 cgaggccgcgctcgtcgccg 28260561
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 66 cggcatccgctccttcgacgtcgacctc 93 |||||||||| || |||||||||||||| Sbjct: 5829301 cggcatccgcaccgtcgacgtcgacctc 5829328 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 cgccgaccccgccgtccacg 163 |||||||||||||||||||| Sbjct: 5341053 cgccgaccccgccgtccacg 5341072
>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0705A05 Length = 143765 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cgaggccgcgctcgtcgccg 127 |||||||||||||||||||| Sbjct: 52357 cgaggccgcgctcgtcgccg 52376
>dbj|AK121506.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022P13, full insert sequence Length = 4194 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cgaggccgcgctcgtcgccg 127 |||||||||||||||||||| Sbjct: 2059 cgaggccgcgctcgtcgccg 2078
>dbj|AK119880.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-G08, full insert sequence Length = 3129 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cgaggccgcgctcgtcgccg 127 |||||||||||||||||||| Sbjct: 2002 cgaggccgcgctcgtcgccg 2021
>dbj|AK111869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045G11, full insert sequence Length = 2583 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 cgaggccgcgctcgtcgccg 127 |||||||||||||||||||| Sbjct: 2120 cgaggccgcgctcgtcgccg 2101
>dbj|AK111817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013139P17, full insert sequence Length = 2982 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cgaggccgcgctcgtcgccg 127 |||||||||||||||||||| Sbjct: 842 cgaggccgcgctcgtcgccg 861
>gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71 of 83 of the complete sequence Length = 299903 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 495 agcagacattgtcattgcagcagc 518 ||||| |||||||||||||||||| Sbjct: 121405 agcagtcattgtcattgcagcagc 121382
>emb|AJ535058.1|OSA535058 Oryza sativa (japonica cultivar-group) mdr14 gene for MDR-like ABC transporter, exons 1-4 Length = 5239 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cgaggccgcgctcgtcgccg 127 |||||||||||||||||||| Sbjct: 3226 cgaggccgcgctcgtcgccg 3245
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 cgaggccgcgctcgtcgccgaggt 131 |||||||| ||||||||||||||| Sbjct: 1747849 cgaggccgtgctcgtcgccgaggt 1747826
>emb|BX005130.10| Mouse DNA sequence from clone RP23-475L14 on chromosome 2, complete sequence Length = 127298 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 cagcagcaggccaggccatg 531 |||||||||||||||||||| Sbjct: 69491 cagcagcaggccaggccatg 69510
>gb|U17169.1|SAU17169 Streptomyces avermitilis E1-alpha branched-chain alpha keto acid dehydrogenase (bkdA) gene, complete cds, E1-beta branched-chain alpha keto acid dehydrogenase (bkdB) gene, complete cds, and E2 branched-chain alpha keto acid dehydrogenase (bkdC) gene, partial cds Length = 2544 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 cgccgaccccgccgtccacg 163 |||||||||||||||||||| Sbjct: 1509 cgccgaccccgccgtccacg 1528 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,830,154 Number of Sequences: 3902068 Number of extensions: 4830154 Number of successful extensions: 93481 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92236 Number of HSP's gapped (non-prelim): 1238 length of query: 662 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 639 effective length of database: 17,143,297,704 effective search space: 10954567232856 effective search space used: 10954567232856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)