ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags36j21 |
|---|---|
| Clone Library Name | barley_pub |
>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1| Length = 574 Score = 36.6 bits (83), Expect = 0.057 Identities = 41/143 (28%), Positives = 60/143 (41%), Gaps = 1/143 (0%) Frame = -2 Query: 467 PPVMASWAILFPLLSLAA-EIRAPLAMPPINAFFQSYCPRTLSTPYSMPTYTPATAPQYA 291 PP+ +S A+ P A R+ A+PP+ ++ P + TP S+P P + P A Sbjct: 377 PPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTP-PVPTPPSLPPSAPPSLPPSA 435 Query: 290 PSLHIFFSVCSSLRFETLPLWRQSKASSAATLQAPTAPILRKPSTVRLSSGLPRSMAMST 111 P +LP + AP AP L P + ++ LP M + Sbjct: 436 P--------------PSLP------------MGAPAAPPL--PPSAPIAPPLPAGMPAAP 467 Query: 110 LLDPAASPARGILPVPEPSRPVS 42 L PAA PA P P P+ PV+ Sbjct: 468 PLPPAA-PAPPPAPAPAPAAPVA 489
>WNK4_HUMAN (Q96J92) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1) (Protein| kinase with no lysine 4) (Protein kinase, lysine-deficient 4) Length = 1243 Score = 36.2 bits (82), Expect = 0.075 Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 12/134 (8%) Frame = -2 Query: 401 PLAMPPINAFFQSYCP---RTLSTPYSMPTYTPATAPQYAPSLHIFFSVC--SSLRFETL 237 P+ PP + + P + S P PT +P P + S C SSL + Sbjct: 830 PITSPPCHPSPSPFSPISSQVSSNPSPHPTSSPLPFSSSTPEFPVPLSQCPWSSLPTTSP 889 Query: 236 PLWRQSKASSAATLQAPTAPILRKPSTVRLSSGLPR-------SMAMSTLLDPAASPARG 78 P + S S TL +P P S+ ++ P S+A+ T+ SP+ G Sbjct: 890 PTF--SPTCSQVTLSSPFFPPCPSTSSFPSTTAAPLLSLASAFSLAVMTVAQSLLSPSPG 947 Query: 77 ILPVPEPSRPVSLP 36 +L P+ P LP Sbjct: 948 LLSQSPPAPPSPLP 961
>NCPR_PHAAU (P37116) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR)| (P450R) Length = 690 Score = 35.4 bits (80), Expect = 0.13 Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 11/106 (10%) Frame = -2 Query: 431 LLSLAAEIRAPLAMPPINAFFQSYCPRTLSTPYSMPTYTPATAPQY-----------APS 285 L+ + AE P A PP+ FF + PR YS+ + +P APQ P+ Sbjct: 440 LVEVMAEF--PSAKPPLGVFFAAIAPRLQPRYYSISS-SPRFAPQRVHVTCALVYGPTPT 496 Query: 284 LHIFFSVCSSLRFETLPLWRQSKASSAATLQAPTAPILRKPSTVRL 147 I VCS+ W ++ S + +API +PS +L Sbjct: 497 GRIHKGVCST--------WMKNAIPSEKSQDCSSAPIFIRPSNFKL 534
>ARLY_PROMM (Q7TV86) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 470 Score = 35.0 bits (79), Expect = 0.17 Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 2/113 (1%) Frame = -1 Query: 519 VARLGEVVDELDGGRDGASGDGVLGDLVPFVVARGRDQGAACDASNQRVFPVILSADPFH 340 +A LG V +L GR + D V DL ++ R D D +R +L+ H Sbjct: 101 IALLGPVGKKLHTGR--SRNDQVGTDLRLWLRRRLDD----LDCELERFQHALLTQAESH 154 Query: 339 --SILHAYIHSSNSTPICALLAHFLQCLLELALRDTPTLEAVEGVLGGHPAGA 187 +++ Y H + P+C LAH L +E+ RD L+ V G + P GA Sbjct: 155 RQTLIPGYTHLQRAQPLC--LAHHLLAYIEMIQRDRDRLKDVRGRVNISPLGA 205
>LDB3_HUMAN (O75112) LIM domain-binding protein 3 (Z-band alternatively spliced| PDZ-motif protein) (Protein cypher) Length = 727 Score = 35.0 bits (79), Expect = 0.17 Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 5/96 (5%) Frame = -2 Query: 434 PLLSLAAEIRAPLAMP-PINAFFQS----YCPRTLSTPYSMPTYTPATAPQYAPSLHIFF 270 P + A IR + P P + + S Y P T TP P YTP+ AP Y PS + Sbjct: 395 PRVVTTASIRPSVYQPVPASTYSPSPGANYSP-TPYTPSPAPAYTPSPAPAYTPSPVPTY 453 Query: 269 SVCSSLRFETLPLWRQSKASSAATLQAPTAPILRKP 162 + + + P + A S A P P R P Sbjct: 454 TPSPAPAYTPSPAPNYNPAPSVAYSGGPAEPASRPP 489
>LDB3_MOUSE (Q9JKS4) LIM domain-binding protein 3 (Z-band alternatively spliced| PDZ-motif protein) (Protein cypher) (Protein oracle) Length = 723 Score = 35.0 bits (79), Expect = 0.17 Identities = 38/139 (27%), Positives = 53/139 (38%), Gaps = 5/139 (3%) Frame = -2 Query: 434 PLLSLAAEIRAPLAMP-PINAFFQS----YCPRTLSTPYSMPTYTPATAPQYAPSLHIFF 270 P + A IR + P P +++ S Y P T TP P YTP+ AP Y PS + Sbjct: 391 PRVVTTASIRPSVYQPVPASSYSPSPGANYSP-TPYTPSPAPAYTPSPAPTYTPSPAPTY 449 Query: 269 SVCSSLRFETLPLWRQSKASSAATLQAPTAPILRKPSTVRLSSGLPRSMAMSTLLDPAAS 90 S + + P + SAA P+ R P S + ST + Sbjct: 450 SPSPAPAYTPSPAPNYTPTPSAAYSGGPSESASRPPWVTDDSFSQKFAPGKSTTTVSKQT 509 Query: 89 PARGILPVPEPSRPVSLPI 33 RG P P+ P P+ Sbjct: 510 LPRG-APAYNPTGPQVTPL 527
>NFAC2_HUMAN (Q13469) Nuclear factor of activated T-cells, cytoplasmic 2 (T cell| transcription factor NFAT1) (NFAT pre-existing subunit) (NF-ATp) Length = 925 Score = 34.3 bits (77), Expect = 0.29 Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 15/146 (10%) Frame = -2 Query: 434 PLLSLAAEIRAPLAMPPINAFFQSYCPRTLSTPYSMP----TYTPATAPQYAPSLHIFFS 267 PL +AA R L +P + + C S+ S T++P T+P +P+ Sbjct: 141 PLAGVAASPRFTLPVPGFEGYREPLCLSPASSGSSASFISDTFSPYTSPCVSPNNGGPDD 200 Query: 266 VCSSLRFETLPLW---RQSKASSAATLQAPTAPILR-----KPSTVRLSSGLPRSMAMS- 114 +C +F+ +P R S S T A + + R +P++ S G R + + Sbjct: 201 LCP--QFQNIPAHYSPRTSPIMSPRTSLAEDSCLGRHSPVPRPASRSSSPGAKRRHSCAE 258 Query: 113 --TLLDPAASPARGILPVPEPSRPVS 42 L P ASP R P P+PS V+ Sbjct: 259 ALVALPPGASPQRSRSPSPQPSSHVA 284
>FZD5_HUMAN (Q13467) Frizzled 5 precursor (Frizzled-5) (Fz-5) (hFz5) (FzE5)| Length = 585 Score = 33.1 bits (74), Expect = 0.64 Identities = 30/93 (32%), Positives = 37/93 (39%) Frame = -2 Query: 320 YTPATAPQYAPSLHIFFSVCSSLRFETLPLWRQSKASSAATLQAPTAPILRKPSTVRLSS 141 YTP P Y L SVC + PL RQ + + P+L + + V L Sbjct: 90 YTPICLPDYHKPLPPCRSVCERAKAGCSPLMRQYGFAWPERMSCDRLPVLGRDAEV-LCM 148 Query: 140 GLPRSMAMSTLLDPAASPARGILPVPEPSRPVS 42 RS A T P PA+ LP P P P S Sbjct: 149 DYNRSEA--TTAPPRPFPAKPTLPGP-PGAPAS 178
>PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)| Length = 5120 Score = 32.7 bits (73), Expect = 0.83 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 6/67 (8%) Frame = -2 Query: 218 KASSAATLQAPTAPILRKPSTVRLSSGLPR------SMAMSTLLDPAASPARGILPVPEP 57 K ++ T PT ++ K STV + S P S+ S+ LD A P+ P P P Sbjct: 2275 KEPASETPAVPTPRVVSKTSTVSMPSSAPALTSKVFSLFRSSSLDSPAQPSPPSPPPPPP 2334 Query: 56 SRPVSLP 36 P LP Sbjct: 2335 PPPPPLP 2341
>ATF2_RAT (Q00969) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) (cAMP response element-binding protein CRE-BP1) Length = 487 Score = 32.3 bits (72), Expect = 1.1 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Frame = -2 Query: 239 LPLWRQSKASSA----ATLQAPTAPILRKPSTVRLSSGLPRSMAMSTLLDPAASPARGIL 72 +PL + ++ +SA A+LQ P + S+V + +P S ST++ A S R I+ Sbjct: 133 IPLAQTAQPTSAIVRPASLQVPNVLLTSSDSSVIIQQAVP-SPTSSTVITQAPSSNRPIV 191 Query: 71 PVPEP 57 PVP P Sbjct: 192 PVPGP 196
>ARLY_SYNPX (Q7TTY1) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 471 Score = 32.3 bits (72), Expect = 1.1 Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 2/113 (1%) Frame = -1 Query: 519 VARLGEVVDELDGGRDGASGDGVLGDLVPFVVARGRDQGAACDASNQRVFPVILSADPFH 340 +A +G V +L GR S + +G + + R D+ D QR+ +L H Sbjct: 101 IALVGSVGKKLHTGR---SRNDQVGTDLRLWLRRRLDE---IDGDLQRLQRALLDQADRH 154 Query: 339 --SILHAYIHSSNSTPICALLAHFLQCLLELALRDTPTLEAVEGVLGGHPAGA 187 +++ Y H + P+C LAH L +E+ RD L V G + P GA Sbjct: 155 QSTMIPGYTHLQRAQPLC--LAHHLLAYIEMLQRDRQRLGDVRGRVNICPLGA 205
>RPB1_CAEBR (P35074) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1853 Score = 32.0 bits (71), Expect = 1.4 Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 7/124 (5%) Frame = -2 Query: 386 PINAFFQSYCPRTLSTPYSMPTYTPA------TAPQYAPSLHIFFSVCSSLRFETLPLWR 225 P + ++ Y P + S PTY+P T+PQY+P+ +S S + P + Sbjct: 1709 PTSPSYEGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPT-SPQYSPSSPTYTPSSPTYN 1767 Query: 224 QSKASSAATLQ-APTAPILRKPSTVRLSSGLPRSMAMSTLLDPAASPARGILPVPEPSRP 48 + + ++ Q +PT+P P++ + P+ S P+ + G PS P Sbjct: 1768 PTSPRAFSSPQYSPTSPTY-SPTSPSYTPSSPQYSPTSPTYTPSPADQPGTSNQYSPSSP 1826 Query: 47 VSLP 36 P Sbjct: 1827 TYSP 1830
>ATF2_MOUSE (P16951) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) (cAMP response element-binding protein CRE-BP1) (MXBP protein) Length = 487 Score = 32.0 bits (71), Expect = 1.4 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Frame = -2 Query: 239 LPLWRQSKASSA----ATLQAPTAPILRKPSTVRLSSGLPRSMAMSTLLDPAASPARGIL 72 +PL + ++ +SA A+LQ P + S+V + +P S ST++ A S R I+ Sbjct: 133 VPLAQTAQPTSAIVRPASLQVPNVLLTSSDSSVIIQQAVP-SPTSSTVITQAPSSNRPIV 191 Query: 71 PVPEP 57 PVP P Sbjct: 192 PVPGP 196
>ATF2_HUMAN (P15336) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) (cAMP response element-binding protein CRE-BP1) (HB16) Length = 487 Score = 32.0 bits (71), Expect = 1.4 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Frame = -2 Query: 239 LPLWRQSKASSA----ATLQAPTAPILRKPSTVRLSSGLPRSMAMSTLLDPAASPARGIL 72 +PL + ++ +SA A+LQ P + S+V + +P S ST++ A S R I+ Sbjct: 133 VPLAQTAQPTSAIVRPASLQVPNVLLTSSDSSVIIQQAVP-SPTSSTVITQAPSSNRPIV 191 Query: 71 PVPEP 57 PVP P Sbjct: 192 PVPGP 196
>MORC2_HUMAN (Q9Y6X9) MORC family CW-type zinc finger 2 (Zinc finger CW-type| coiled-coil domain protein 1) Length = 970 Score = 32.0 bits (71), Expect = 1.4 Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 2/113 (1%) Frame = -2 Query: 389 PPINAFFQSYCPRTLSTPYSMPTYTPATAPQYAPSLHIFFSVCSSLRFETLP-LWRQSKA 213 PP+ A ++ S P S+PT PA+ P+ AP V SS LP L + +A Sbjct: 554 PPLPAVIRN----APSRPPSLPTPRPASQPRKAP-------VISST--PKLPALAAREEA 600 Query: 212 SSAATLQAPTAPILRKPSTVRLSSGLPRSMAMSTLLDPAASP-ARGILPVPEP 57 S++ LQ P AP RKP+ + + R + L P+ P ++ VP P Sbjct: 601 STSRLLQPPEAP--RKPANTLVKTA-SRPAPLVQQLSPSLLPNSKSPREVPSP 650
>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3726 Score = 31.6 bits (70), Expect = 1.8 Identities = 25/95 (26%), Positives = 38/95 (40%) Frame = -2 Query: 332 SMPTYTPATAPQYAPSLHIFFSVCSSLRFETLPLWRQSKASSAATLQAPTAPILRKPSTV 153 S+P +TPA +P ++ L T+P + PT+ + KPS+ Sbjct: 3141 SLPGFTPANTALTSPKPNLM-----GLPSTTVP-----------SPGLPTSGLPNKPSSA 3184 Query: 152 RLSSGLPRSMAMSTLLDPAASPARGILPVPEPSRP 48 LSS P M+ P P + PV +P P Sbjct: 3185 SLSSPTPAQATMAMAPQPPPQPQQPQPPVQQPPPP 3219
>AP180_RAT (Q05140) Clathrin coat assembly protein AP180 (Clathrin| coat-associated protein AP180) (91 kDa synaptosomal-associated protein) Length = 915 Score = 31.6 bits (70), Expect = 1.8 Identities = 46/170 (27%), Positives = 66/170 (38%), Gaps = 11/170 (6%) Frame = -2 Query: 488 STAVAMAPPVMASWAILFPLLSLAAEIRAPLAMPPINAFFQSYCPRTLSTPYSMPTYT-- 315 +TA A PV A+ A + A P ++ F P S P PT + Sbjct: 454 ATAPATPAPVAAALDACSGNDPFAPSEGSAEAAPELDLFAMK--PPETSAPVVTPTASTA 511 Query: 314 ---PATAPQYAPSLHIFFSVCSSLRFETLPLWRQSKASSAATLQAPTAPILRKP---STV 153 PATAP AP+ + + ++ + A++A T AP A + S Sbjct: 512 PPVPATAPSPAPTA-VAATAATTTAAAAATTTATTSAAAATTAAAPPALDIFGDLFDSAP 570 Query: 152 RLSSGLPRSMAMSTLL---DPAASPARGILPVPEPSRPVSLPIXSX*HSA 12 +++ +A S L D +SP RG PVPE S L S H A Sbjct: 571 EVAAASKPDVAPSIDLFGTDAFSSPPRGASPVPESSLTADLLSGSGFHCA 620
>ARLY_HALMA (Q5UZ47) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 499 Score = 31.2 bits (69), Expect = 2.4 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -1 Query: 204 GHPAGADGADLEEAVDGAVEQRVAEVDGDVH 112 GH A DG D+ EA++ AV +RV G +H Sbjct: 83 GHDALPDGEDVHEAIESAVIERVGPDGGKMH 113
>CASB_PIG (P39037) Beta-casein precursor| Length = 232 Score = 31.2 bits (69), Expect = 2.4 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 6/61 (9%) Frame = -2 Query: 197 LQAPTAPILRKPSTVRLSSGLP---RSMAMSTLL---DPAASPARGILPVPEPSRPVSLP 36 L P A +L P V +P R M LL DP P +G PVP+P PV P Sbjct: 177 LSLPQAKVLPVPQQV-----VPFPQRDMPFQALLLYQDPLLGPLQGFYPVPQPVAPVYNP 231 Query: 35 I 33 + Sbjct: 232 V 232
>NFAC2_MOUSE (Q60591) Nuclear factor of activated T-cells, cytoplasmic 2 (T cell| transcription factor NFAT1) (NFAT pre-existing subunit) (NF-ATp) Length = 1064 Score = 31.2 bits (69), Expect = 2.4 Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 15/145 (10%) Frame = -2 Query: 431 LLSLAAEIRAPLAMPPINAFFQSYCPRTLSTPYSMP----TYTPATAPQYAPSLHIFFSV 264 L +AA R L +P + + C S+ S T++P T+P +P+ + Sbjct: 144 LAGVAASPRFTLPVPGYEGYREPLCLSPASSGSSASFISDTFSPYTSPCVSPNNAGPDDL 203 Query: 263 CSSLRFETLPLW---RQSKASSAATLQAPTAPILR-----KPSTVRLSSGLPRSMAMSTL 108 C +F+ +P R S S T A + + R +P++ S G R + + Sbjct: 204 CP--QFQNIPAHYSPRTSPIMSPRTSLAEDSCLGRHSPVPRPASRSSSPGAKRRHSCAEA 261 Query: 107 LD---PAASPARGILPVPEPSRPVS 42 L PAASP R P P+PS V+ Sbjct: 262 LVAPLPAASPQRSRSPSPQPSPHVA 286
>ATF2_CHICK (O93602) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) Length = 487 Score = 30.8 bits (68), Expect = 3.2 Identities = 18/49 (36%), Positives = 26/49 (53%) Frame = -2 Query: 203 ATLQAPTAPILRKPSTVRLSSGLPRSMAMSTLLDPAASPARGILPVPEP 57 A+LQ P + S+V + +P S ST++ A S R I+PVP P Sbjct: 149 ASLQVPNVLLTSSDSSVIIQQAIP-SPTSSTVITQAPSSNRPIVPVPGP 196
>IE18_PRVKA (P33479) Immediate-early protein IE180| Length = 1446 Score = 30.8 bits (68), Expect = 3.2 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Frame = -2 Query: 188 PTAPILRK--PSTVRLSSGLPRSMAMSTLLDPAASPARGILPVPEPSRP 48 P AP+ R P + + PR A S AASPA P PEP+RP Sbjct: 407 PGAPLARAGPPPSPPAPAAAPRPSASSASSSAAASPA----PAPEPARP 451
>RIMK_XANOR (Q5H3K7) Ribosomal protein S6 modification protein| Length = 295 Score = 30.4 bits (67), Expect = 4.1 Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 5/119 (4%) Frame = -1 Query: 501 VVDELDGGRDGAS-GDGVLGDLVPFVVARGRDQGAACD-ASNQRVFPVILSADPFHSILH 328 +V E G +GA V+GD V VA R Q A D SN + + AD Sbjct: 175 IVQEFIGEAEGADLRCFVVGDRV---VAAMRRQAAEGDFRSNLHLGGTAVVADATELERE 231 Query: 327 AYIHSSNSTPICALLAHFLQCL---LELALRDTPTLEAVEGVLGGHPAGADGADLEEAV 160 + S+ + + ++ L L + TP LE VEGV G AGA LE++V Sbjct: 232 VAVRSARALGLAVAGVDLIRSKRGPLVLEVNSTPGLEGVEGVCGVDVAGAIVQHLEQSV 290
>NCPR_CATRO (Q05001) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR)| (P450R) Length = 714 Score = 30.4 bits (67), Expect = 4.1 Identities = 35/131 (26%), Positives = 50/131 (38%), Gaps = 11/131 (8%) Frame = -2 Query: 431 LLSLAAEIRAPLAMPPINAFFQSYCPRTLSTPYSMPTYTPATAP-----------QYAPS 285 LL + AE P A PP+ FF + PR YS+ + +P AP + P Sbjct: 464 LLEVMAEF--PSAKPPLGVFFAAIAPRLQPRFYSISS-SPRMAPSRIHVTCALVYEKTPG 520 Query: 284 LHIFFSVCSSLRFETLPLWRQSKASSAATLQAPTAPILRKPSTVRLSSGLPRSMAMSTLL 105 I VCS+ +PL S API + S +L + P+ + Sbjct: 521 GRIHKGVCSTWMKNAIPLEESRDCS--------WAPIFVRQSNFKLPAD-PKVPVIMIGP 571 Query: 104 DPAASPARGIL 72 +P RG L Sbjct: 572 GTGLAPFRGFL 582
>EF1D1_ARATH (P48006) Elongation factor 1-delta 1 (EF-1-delta 1) (Elongation| factor 1B-beta 1) (eEF-1B beta 1) Length = 231 Score = 30.4 bits (67), Expect = 4.1 Identities = 14/35 (40%), Positives = 24/35 (68%) Frame = +1 Query: 250 RKLEQTLKKMCKEGAYWGAVAGVYVGMEYGVERVR 354 +KLE+ +K + EG +WGA V VG YG+++++ Sbjct: 159 KKLEEAVKSIQMEGLFWGASKLVPVG--YGIKKLQ 191
>DCP1A_MOUSE (Q91YD3) mRNA decapping enzyme 1A (EC 3.-.-.-) (Transcription| factor SMIF) (MAD homolog 4-interacting transcription coactivator 1) (Smad4-interacting transcriptional co-activator) Length = 602 Score = 30.4 bits (67), Expect = 4.1 Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 5/112 (4%) Frame = -2 Query: 425 SLAAEIRAPLAMPPINAFFQSYCPRTLSTPYSMPTYTPATAPQYAPSLHIFFS---VCSS 255 +++A + + P + + Q+ P S P +P+ P P+ S + S Sbjct: 466 AVSASLSNMVLAPTLQSMQQNQDPEVFSQPKVLPSAIPIAGSPLVPATTTAVSSVLLSPS 525 Query: 254 LRFETLPLWR--QSKASSAATLQAPTAPILRKPSTVRLSSGLPRSMAMSTLL 105 + +T+P + KASS + L TA RKPS + L +S TL+ Sbjct: 526 VFQQTVPRAADLERKASSPSPLTVGTAESQRKPSII-----LSKSQLQDTLI 572
>RPB1_SCHPO (P36594) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RNA polymerase II subunit 1) Length = 1752 Score = 30.4 bits (67), Expect = 4.1 Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 2/145 (1%) Frame = -2 Query: 464 PVMASWAILFPLLSLAAEIRAPLAMPPINAFFQSYCPRTLSTPYSMPTYTPATAPQYAPS 285 P S++ P S + +P + P +A SY P + S + P+Y+P T+P Y+P+ Sbjct: 1580 PTSPSYSPTSPSYSPTSPSYSPTS-PSYSATSPSYSPTSPSYSPTSPSYSP-TSPSYSPT 1637 Query: 284 LHIFFSVCSSLRFETLPLWRQSKASSAAT--LQAPTAPILRKPSTVRLSSGLPRSMAMST 111 +S S T P + + S + T +PT+P P++ S P S Sbjct: 1638 -SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSPSYSPTSP 1695 Query: 110 LLDPAASPARGILPVPEPSRPVSLP 36 P + P P+ P P Sbjct: 1696 SYSPTSPSYSPTSPSYSPTSPSYSP 1720
>FZD5_MOUSE (Q9EQD0) Frizzled 5 precursor (Frizzled-5) (Fz-5) (mFz5)| Length = 577 Score = 30.4 bits (67), Expect = 4.1 Identities = 26/87 (29%), Positives = 34/87 (39%) Frame = -2 Query: 320 YTPATAPQYAPSLHIFFSVCSSLRFETLPLWRQSKASSAATLQAPTAPILRKPSTVRLSS 141 YTP P Y L SVC + PL RQ + + P+L + V L Sbjct: 90 YTPICLPDYHKPLPPCRSVCERAKAGCSPLMRQYGFAWPERMSCDRLPVLGGDAEV-LCM 148 Query: 140 GLPRSMAMSTLLDPAASPARGILPVPE 60 RS T P + PA+ LP P+ Sbjct: 149 DYNRS---ETTASPKSFPAKPTLPGPQ 172
>CF150_HUMAN (Q8N884) Protein C6orf150| Length = 522 Score = 30.0 bits (66), Expect = 5.4 Identities = 22/63 (34%), Positives = 26/63 (41%) Frame = -2 Query: 221 SKASSAATLQAPTAPILRKPSTVRLSSGLPRSMAMSTLLDPAASPARGILPVPEPSRPVS 42 S A+SA + P R+P+ R S R ST P P VP P PVS Sbjct: 94 SDATSAPGAEGLEPPAAREPALSRAGSCRQRGARCSTKPRPPPGP----WDVPSPGLPVS 149 Query: 41 LPI 33 PI Sbjct: 150 API 152
>CARB_PSESM (Q87WP4) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1073 Score = 30.0 bits (66), Expect = 5.4 Identities = 30/117 (25%), Positives = 43/117 (36%) Frame = -1 Query: 378 RVFPVILSADPFHSILHAYIHSSNSTPICALLAHFLQCLLELALRDTPTLEAVEGVLGGH 199 R ++ D L + SN +P+ LL HFL C +E+ + Sbjct: 722 RAMEIVYQEDELKRYLREAVQVSNDSPV--LLDHFLNCAIEMDV---------------- 763 Query: 198 PAGADGADLEEAVDGAVEQRVAEVDGDVHLXXXXXXXXXRHPSGSGTFSAGLPPYLL 28 A DG D+ V GA+ Q + + VH SG + LPPY L Sbjct: 764 DAVCDGTDV---VIGAIMQHIEQ--AGVH---------------SGDSACSLPPYSL 800
>CARB_PSEPK (Q88DU6) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1073 Score = 30.0 bits (66), Expect = 5.4 Identities = 30/117 (25%), Positives = 43/117 (36%) Frame = -1 Query: 378 RVFPVILSADPFHSILHAYIHSSNSTPICALLAHFLQCLLELALRDTPTLEAVEGVLGGH 199 R ++ D L + SN +P+ LL HFL C +E+ + Sbjct: 722 RAMEIVYELDELKRYLREAVQVSNDSPV--LLDHFLNCAIEMDV---------------- 763 Query: 198 PAGADGADLEEAVDGAVEQRVAEVDGDVHLXXXXXXXXXRHPSGSGTFSAGLPPYLL 28 A DG D+ V GA+ Q + + VH SG + LPPY L Sbjct: 764 DAVCDGTDV---VIGAIMQHIEQ--AGVH---------------SGDSACSLPPYSL 800
>TBX3_MOUSE (P70324) T-box transcription factor TBX3 (T-box protein 3)| Length = 741 Score = 30.0 bits (66), Expect = 5.4 Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 5/141 (3%) Frame = -2 Query: 497 LMNSTAVAMAP-----PVMASWAILFPLLSLAAEIRAPLAMPPINAFFQSYCPRTLSTPY 333 ++ S +AM+P P ++ S AA + P +N S PR +PY Sbjct: 584 VLASQGLAMSPFGSLFPYPYTYMAAAAAASTAAASSSVHRHPFLN--LNSMRPRLRYSPY 641 Query: 332 SMPTYTPATAPQYAPSLHIFFSVCSSLRFETLPLWRQSKASSAATLQAPTAPILRKPSTV 153 S+P P + SSL LP S AS+A L A + P++V Sbjct: 642 SIPVPVPDS---------------SSLLATALP----SMASAAGPLDGKAAALAASPASV 682 Query: 152 RLSSGLPRSMAMSTLLDPAAS 90 + SG + STL + S Sbjct: 683 AVDSGSELNSRSSTLSSGSVS 703
>MCR_MOUSE (Q8VII8) Mineralocorticoid receptor (MR)| Length = 978 Score = 30.0 bits (66), Expect = 5.4 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 1/127 (0%) Frame = -2 Query: 434 PLLSLAAEIRAPLAMPPINAFFQSYCPRTLSTPYSMPTYTPATAPQYAPSLHIFFSVCSS 255 PL S + +++P++ PP S+C ++ +P S P P + +P+ ++ S CS Sbjct: 260 PLSSPLSSMKSPISSPP------SHC--SVKSPVSSPNNVPLRSSVSSPA-NLNNSRCS- 309 Query: 254 LRFETLPLWRQSKASSAATLQAPTAPILRKPSTVRLSSGLPRSMAMSTLLDPAASPARGI 75 + S ++ +TL +PTA STV S G P S A S A++ A I Sbjct: 310 -------VSSPSNTNNRSTLSSPTA------STVG-SIGSPISNAFSYTTSGASAGAGAI 355 Query: 74 LP-VPEP 57 VP P Sbjct: 356 QDMVPSP 362
>ARLY_THET2 (Q72GZ4) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 462 Score = 30.0 bits (66), Expect = 5.4 Identities = 19/55 (34%), Positives = 26/55 (47%) Frame = -1 Query: 351 DPFHSILHAYIHSSNSTPICALLAHFLQCLLELALRDTPTLEAVEGVLGGHPAGA 187 DP + +L Y H + P+ LLAH+ E+ RD LE + L P GA Sbjct: 149 DPLY-VLPGYTHLQRAQPV--LLAHWFLAYYEMLKRDAGRLEDAKERLNESPLGA 200
>BARD1_RAT (Q9QZH2) BRCA1-associated RING domain protein 1 (BARD-1)| Length = 768 Score = 30.0 bits (66), Expect = 5.4 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 15/59 (25%) Frame = -2 Query: 263 CSSLRFETLP----LWRQSKASSAATLQAPTAP-----------ILRKPSTVRLSSGLP 132 CSSL L L RQS AS + +P P ++ KPSTV+LSSG+P Sbjct: 352 CSSLPSGRLQVDVTLRRQSNASDDSLSLSPGTPPSLLNNSTHRQMMSKPSTVKLSSGIP 410
>YOPE_YEREN (P31492) Outer membrane virulence protein yopE| Length = 219 Score = 30.0 bits (66), Expect = 5.4 Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Frame = -2 Query: 362 YCPRTLSTPYSMPTYTPATAPQYAPSLHIFFSVCSSLRFETLPLWRQSKAS-SAATLQ 192 + R S P TPA P PS F L ETLP + Q +S A TLQ Sbjct: 73 FIQRMFSEGSHKPVVTPALTPAQMPSPTSFSDSIKQLAAETLPKYMQQLSSLDAETLQ 130
>KDSA_ERWCT (Q6D547) 2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55)| (Phospho-2-dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) (KDOPS) Length = 284 Score = 29.6 bits (65), Expect = 7.0 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Frame = -1 Query: 456 GVLGDLVPFVVARGRDQGAACD-ASNQRVFPVILSADPFHSILHAYIHSSNSTPICALLA 280 G +G++V + G DQ CD SN +++ F+ + HA SN +P+ + Sbjct: 146 GQMGNIVDKFIEGGNDQIILCDRGSNFGYDNLVVDMLGFNVMKHA----SNGSPVIFDVT 201 Query: 279 HFLQC 265 H LQC Sbjct: 202 HALQC 206
>MUC2_RAT (Q62635) Mucin-2 precursor (Intestinal mucin 2) (Fragment)| Length = 1513 Score = 29.6 bits (65), Expect = 7.0 Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 1/114 (0%) Frame = -2 Query: 365 SYCPRTLSTPYSMPTYTPATAPQYAPSLHIFFSVCSSLRFETLPLWRQSKASSAATLQAP 186 S P+ S+P ++PT +P T+ +P+ S S T + + + +T Sbjct: 1400 SSTPQPTSSPTTLPTTSPLTSSATSPTTSHITSTVSPTTSPTTSTTSPTTSPTTSTTSPT 1459 Query: 185 TAPILRKPS-TVRLSSGLPRSMAMSTLLDPAASPARGILPVPEPSRPVSLPIXS 27 T+ PS T +S P +T P+ P + P + PI S Sbjct: 1460 TSTTSPTPSPTTSTTSPTPSPTTSTTSPTPS--------PTTSTTSPTTSPITS 1505
>GP10_DICDI (Q06885) Glycoprotein gp100 precursor (P29F8)| Length = 544 Score = 29.6 bits (65), Expect = 7.0 Identities = 29/114 (25%), Positives = 41/114 (35%), Gaps = 4/114 (3%) Frame = -2 Query: 371 FQSYCPRTLSTPYSMPTYTPATAPQYA--PSLHIFFSVCSSLRFETLPLWRQSKASSAAT 198 F P TP S PT TP + P P++ T+P S S + Sbjct: 113 FSKQTPTPTPTPTSKPTSTPTSTPSQTIPPTVS-----------PTVPPQTTSPTSKPTS 161 Query: 197 LQAPTAPILRKPSTVRLSSGLPRSMAMSTLLDPAAS--PARGILPVPEPSRPVS 42 PT+ + S +P +T P S P + +P P P+RP S Sbjct: 162 TPTPTSTPTPTSTPTPTSQTIPPP---TTTPKPTKSSKPTKTPVPTPTPTRPSS 212
>LIVH_SALTY (P0A2J1) High-affinity branched-chain amino acid transport system| permease protein livH (LIV-I protein H) Length = 308 Score = 29.6 bits (65), Expect = 7.0 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = +1 Query: 166 FLKIGAVG-ACRVAAEDAFDCLQSGSVSKRKLEQTLKKMCKEGAYWGAVAGVYVGMEYGV 342 F++ +G ACR AED L+ S+ ++ + GA AVAGV +G YGV Sbjct: 174 FIRYSRMGRACRACAED----LKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGV 229
>LIVH_SALTI (P0A2J2) High-affinity branched-chain amino acid transport system| permease protein livH (LIV-I protein H) Length = 308 Score = 29.6 bits (65), Expect = 7.0 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = +1 Query: 166 FLKIGAVG-ACRVAAEDAFDCLQSGSVSKRKLEQTLKKMCKEGAYWGAVAGVYVGMEYGV 342 F++ +G ACR AED L+ S+ ++ + GA AVAGV +G YGV Sbjct: 174 FIRYSRMGRACRACAED----LKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGV 229
>LIVH_ECOLI (P0AEX7) High-affinity branched-chain amino acid transport system| permease protein livH (LIV-I protein H) Length = 308 Score = 29.6 bits (65), Expect = 7.0 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = +1 Query: 166 FLKIGAVG-ACRVAAEDAFDCLQSGSVSKRKLEQTLKKMCKEGAYWGAVAGVYVGMEYGV 342 F++ +G ACR AED L+ S+ ++ + GA AVAGV +G YGV Sbjct: 174 FIRYSRMGRACRACAED----LKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGV 229
>LIVH_ECO57 (P0AEX8) High-affinity branched-chain amino acid transport system| permease protein livH (LIV-I protein H) Length = 308 Score = 29.6 bits (65), Expect = 7.0 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = +1 Query: 166 FLKIGAVG-ACRVAAEDAFDCLQSGSVSKRKLEQTLKKMCKEGAYWGAVAGVYVGMEYGV 342 F++ +G ACR AED L+ S+ ++ + GA AVAGV +G YGV Sbjct: 174 FIRYSRMGRACRACAED----LKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGV 229
>CASZ1_HUMAN (Q86V15) Castor homolog 1 zinc finger protein (Castor-related| protein) Length = 1044 Score = 29.6 bits (65), Expect = 7.0 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Frame = -2 Query: 236 PLWRQSKAS-SAATLQAPTAPILRKPSTVRLSSGLPRSMAMSTLLDPAASPARGILPVPE 60 P +QS AS +AAT P KP ++S LP+ + S L A S + LP P Sbjct: 620 PTSQQSSASLAAATAATEAGPSATKPPNSKISGLLPQGLPGSIPLALALSNSG--LPTPT 677 Query: 59 PSRPV 45 P P+ Sbjct: 678 PYFPI 682
>TBX3_RAT (Q7TST9) T-box transcription factor TBX3 (T-box protein 3)| Length = 743 Score = 29.6 bits (65), Expect = 7.0 Identities = 26/89 (29%), Positives = 37/89 (41%) Frame = -2 Query: 356 PRTLSTPYSMPTYTPATAPQYAPSLHIFFSVCSSLRFETLPLWRQSKASSAATLQAPTAP 177 PR +PYS+P P + SSL LP S AS+A L +A Sbjct: 636 PRLRYSPYSIPVPVPDS---------------SSLLATALP----SMASAAGPLDGKSAV 676 Query: 176 ILRKPSTVRLSSGLPRSMAMSTLLDPAAS 90 + P++V + SG + STL + S Sbjct: 677 LAASPASVAVDSGSELNSRSSTLSSGSVS 705
>SOCS6_HUMAN (O14544) Suppressor of cytokine signaling 6 (SOCS-6) (Suppressor of| cytokine signaling 4) (SOCS-4) (Cytokine-inducible SH2 protein 4) (CIS-4) Length = 535 Score = 29.3 bits (64), Expect = 9.2 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = +1 Query: 181 AVGACRVAAEDAFDCLQS-GSVSKRKLEQTLKKMCKEGAYWGAV 309 A G RV +D +QS G + L + LKK+ K+G YWG + Sbjct: 351 APGVARV-----YDSVQSSGPMVVTSLTEELKKLAKQGWYWGPI 389
>CNKR1_HUMAN (Q969H4) Connector enhancer of kinase suppressor of ras 1| (Connector enhancer of KSR1) (hCNK1) (Connector enhancer of KSR-like) (CNK homolog protein 1) Length = 720 Score = 29.3 bits (64), Expect = 9.2 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 2/79 (2%) Frame = -2 Query: 356 PRTLSTPYSM-PTYTPATAPQYAPSLHIF-FSVCSSLRFETLPLWRQSKASSAATLQAPT 183 P+ L +P+ P+ + A APS +F F + S+ P W S + L P Sbjct: 295 PQVLDSPHQRSPSLSLAPLSPRAPSEDVFAFDLSSNPSPGPSPAWTDSASLGPEPLPIPP 354 Query: 182 APILRKPSTVRLSSGLPRS 126 P P+ V + GLP S Sbjct: 355 EPPAILPAGVAGTPGLPES 373
>YPX5_CAEEL (Q09277) Hypothetical protein F40H6.5| Length = 1216 Score = 29.3 bits (64), Expect = 9.2 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 4/104 (3%) Frame = -2 Query: 359 CPRTLSTPYSMPTYTPATAPQYAPSLHIFFSVCSSLRFETLPLWRQSKASSAATLQAPTA 180 C R+ +T T P+T + A + S + E +P SK +T Q PT+ Sbjct: 814 CARSHTT-----TVEPSTPLETASTSQSTPSATLTSTTENIP--STSKIPETSTTQRPTS 866 Query: 179 PILRKPSTVRLSS----GLPRSMAMSTLLDPAASPARGILPVPE 60 PIL +T SS + + +T L P +P P+P+ Sbjct: 867 PILTSGATSTSSSTESTTTSPTTSTTTTLPPTTTPYNLSAPIPK 910
>K0319_MOUSE (Q5SZV5) Protein KIAA0319 precursor| Length = 1081 Score = 29.3 bits (64), Expect = 9.2 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 8/76 (10%) Frame = -2 Query: 245 ETLPLWRQSKASSAATLQAPT-----APILRKPSTVRLSSGL---PRSMAMSTLLDPAAS 90 ETL L Q SS + P+ A + P+T +S PRS ST P ++ Sbjct: 262 ETLQLQEQPSNSSGKEVPMPSHNPSPASLESSPATTEKNSNFTVTPRSRKHSTPTFPTST 321 Query: 89 PARGILPVPEPSRPVS 42 G+ P P P P + Sbjct: 322 VLTGLTPPPWPLSPTA 337
>AP180_MOUSE (Q61548) Clathrin coat assembly protein AP180 (Clathrin| coat-associated protein AP180) (91 kDa synaptosomal-associated protein) (Phosphoprotein F1-20) Length = 901 Score = 29.3 bits (64), Expect = 9.2 Identities = 44/169 (26%), Positives = 63/169 (37%), Gaps = 19/169 (11%) Frame = -2 Query: 488 STAVAMAPPVMASWAILFPLLSLAAEIRAPLAMPPINAFFQSYCPRTLSTPYSMPTYT-- 315 +TA A PV A+ A + A P ++ F P S P PT + Sbjct: 454 ATAPATPAPVAAALDACSGNDPFAPSEGSAEAAPELDLFAMK--PPETSAPVVTPTASTA 511 Query: 314 ---PATAPQYAPSLHIFFSVCSSLRFETLPLWRQSKASSAATLQAPTAPILRKPSTVRLS 144 PATAP AP+ +V ++ T + A++ AT A A P + + Sbjct: 512 PPVPATAPSPAPT-----AVAATAATTTAA----AAATTTATTSAAAATTAAAPPALDIF 562 Query: 143 SGL----------PRSMAMSTL----LDPAASPARGILPVPEPSRPVSL 39 L P+ A ++ D +SP RG PVPE S L Sbjct: 563 GDLFDSAPEVAAAPKPDAAPSIDLFGTDAFSSPPRGASPVPESSLTADL 611
>SOCS6_MOUSE (Q9JLY0) Suppressor of cytokine signaling 6 (SOCS-6) (Suppressor of| cytokine signaling 4) (SOCS-4) (Cytokine-inducible SH2 protein 4) (CIS-4) Length = 533 Score = 29.3 bits (64), Expect = 9.2 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = +1 Query: 181 AVGACRVAAEDAFDCLQS-GSVSKRKLEQTLKKMCKEGAYWGAV 309 A G RV +D +QS G + L + LKK+ K+G YWG + Sbjct: 349 APGVARV-----YDSVQSSGPMVVTSLTEELKKLAKQGWYWGPI 387 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,480,554 Number of Sequences: 219361 Number of extensions: 1438485 Number of successful extensions: 6404 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 5982 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6342 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5310515667 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
