ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags36i19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK121935.1| Oryza sativa (japonica cultivar-group) cDNA clon... 276 7e-71
2dbj|AK121679.1| Oryza sativa (japonica cultivar-group) cDNA clon... 276 7e-71
3dbj|AK102869.1| Oryza sativa (japonica cultivar-group) cDNA clon... 268 2e-68
4gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome... 135 2e-28
5dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
6dbj|AK066336.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
7dbj|AK101420.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
8gb|AC158901.5| Mus musculus chromosome 15, clone RP23-77K13, com... 46 0.12
9gb|AC137974.13| Mus musculus chromosome 15, clone RP23-17J3, com... 46 0.12
10dbj|AP006752.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
11ref|XM_803631.1| Trypanosoma cruzi strain CL Brener protein kina... 42 1.9
12emb|AL589738.6| Mouse DNA sequence from clone RP23-322J11 on chr... 42 1.9
13gb|AC022909.13| Homo sapiens chromosome 8, clone RP11-682G1, com... 42 1.9
14gb|AC104233.2| Homo sapiens chromosome 8, clone RP11-3G20, compl... 42 1.9
15gb|AC154136.13| Mus musculus BAC RP23-184A3 (Roswell Park Cance... 42 1.9
16dbj|AP005360.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 1.9
17gb|AC165118.3| Oryctolagus cuniculus, clone Oryctolagus cuniculu... 40 7.6
18gb|AC182655.2| Populus trichocarpa clone Pop1-121O5, complete se... 40 7.6
19gb|AC122844.4| Mus musculus BAC clone RP23-152A2 from 7, complet... 40 7.6
20gb|AC144399.2| Oryctolagus cuniculus clone LBNL1-125D4, complete... 40 7.6
21gb|BC047222.1| Homo sapiens transmembrane protease, serine 5 (sp... 40 7.6
22gb|BC028065.1| Homo sapiens transmembrane protease, serine 5 (sp... 40 7.6
23ref|NM_030770.1| Homo sapiens transmembrane protease, serine 5 (... 40 7.6
24emb|CT030740.8| Mouse DNA sequence from clone RP24-312D7 on chro... 40 7.6
25dbj|AP002436.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.6
26dbj|AP003402.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.6
27gb|AC091332.8| Mus musculus chromosome 17, clone RP23-12K1, comp... 40 7.6
28gb|AC167922.2| Mycosphaerella graminicola clone JGIBBWB-5J8, com... 40 7.6
29emb|AL627211.13| Mouse DNA sequence from clone RP23-104G20 on ch... 40 7.6
30dbj|AB028140.1| Homo sapiens mRNA for spinesin, complete cds 40 7.6 
>dbj|AK121935.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107A08, full
            insert sequence
          Length = 2096

 Score =  276 bits (139), Expect = 7e-71
 Identities = 334/399 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    agagccctatatagtaactcaccatcttctgcttgcacatgcttcggcagtgtccctgta 60
            |||||| || |||||| | || |||||||| ||||||||| | || ||||||||||| ||
Sbjct: 921  agagccatacatagtagcacatcatcttcttcttgcacattcctcagcagtgtccctcta 980

                                                                        
Query: 61   taaagagaagtaccaggacaagcaaggtggaaaaattggactcacattgctcggttcgtg 120
             | |||||||||||||| ||  ||||| ||| ||||||| |||||||||||||||| |||
Sbjct: 981  cagagagaagtaccaggccactcaaggaggacaaattgggctcacattgctcggttggtg 1040

                                                                        
Query: 121  gaacaagcccgcgacacaaacacctgaggatatagcagcagctgcaaggatgaatgactt 180
            | || |||||| ||| |||   ||||| ||| ||||||||||||||||||||||||| ||
Sbjct: 1041 gtacgagcccgggacgcaagatcctgaagatgtagcagcagctgcaaggatgaatgattt 1100

                                                                        
Query: 181  ccacattgggtggtatatgcatcctttggtgcatggagattatcccccagtgatgaggaa 240
            ||||||||| ||||| ||||||||||||||| | || || || || || || ||||||||
Sbjct: 1101 ccacattggatggtacatgcatcctttggtgtacggtgactaccctccggtaatgaggaa 1160

                                                                        
Query: 241  gaatgttgggtccaggctaccatctttcactgctgaagagctgaagagagtgcttgggtc 300
            |||||||||||||||||||||||||||||| ||||||||    |||||||| ||||  ||
Sbjct: 1161 gaatgttgggtccaggctaccatctttcacagctgaagaatcaaagagagtacttgaatc 1220

                                                                        
Query: 301  ttttgattttgtcggatttaaccactacgccgcctcatatgtgaaggctgatcttagcaa 360
             | |||||||||||||||||||||||| | ||||   | |||||  || || ||||||||
Sbjct: 1221 ctatgattttgtcggatttaaccactatgtcgccatttttgtgagagccgaccttagcaa 1280

                                                   
Query: 361  gctggatcagaagctgagagattacatgggtgatgcagc 399
             || |||||||  || |||||||||||||| ||||||||
Sbjct: 1281 acttgatcagagcctcagagattacatgggcgatgcagc 1319



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 491  tacaagaaccctgtggtcatgatccacgagaacggagc 528
            |||||||||||| | ||||||||||| ||||| |||||
Sbjct: 1441 tacaagaaccctattgtcatgatccatgagaatggagc 1478
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>dbj|AK121679.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069H08, full
            insert sequence
          Length = 2059

 Score =  276 bits (139), Expect = 7e-71
 Identities = 334/399 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    agagccctatatagtaactcaccatcttctgcttgcacatgcttcggcagtgtccctgta 60
            |||||| || |||||| | || |||||||| ||||||||| | || ||||||||||| ||
Sbjct: 878  agagccatacatagtagcacatcatcttcttcttgcacattcctcagcagtgtccctcta 937

                                                                        
Query: 61   taaagagaagtaccaggacaagcaaggtggaaaaattggactcacattgctcggttcgtg 120
             | |||||||||||||| ||  ||||| ||| ||||||| |||||||||||||||| |||
Sbjct: 938  cagagagaagtaccaggccactcaaggaggacaaattgggctcacattgctcggttggtg 997

                                                                        
Query: 121  gaacaagcccgcgacacaaacacctgaggatatagcagcagctgcaaggatgaatgactt 180
            | || |||||| ||| |||   ||||| ||| ||||||||||||||||||||||||| ||
Sbjct: 998  gtacgagcccgggacgcaagatcctgaagatgtagcagcagctgcaaggatgaatgattt 1057

                                                                        
Query: 181  ccacattgggtggtatatgcatcctttggtgcatggagattatcccccagtgatgaggaa 240
            ||||||||| ||||| ||||||||||||||| | || || || || || || ||||||||
Sbjct: 1058 ccacattggatggtacatgcatcctttggtgtacggtgactaccctccggtaatgaggaa 1117

                                                                        
Query: 241  gaatgttgggtccaggctaccatctttcactgctgaagagctgaagagagtgcttgggtc 300
            |||||||||||||||||||||||||||||| ||||||||    |||||||| ||||  ||
Sbjct: 1118 gaatgttgggtccaggctaccatctttcacagctgaagaatcaaagagagtacttgaatc 1177

                                                                        
Query: 301  ttttgattttgtcggatttaaccactacgccgcctcatatgtgaaggctgatcttagcaa 360
             | |||||||||||||||||||||||| | ||||   | |||||  || || ||||||||
Sbjct: 1178 ctatgattttgtcggatttaaccactatgtcgccatttttgtgagagccgaccttagcaa 1237

                                                   
Query: 361  gctggatcagaagctgagagattacatgggtgatgcagc 399
             || |||||||  || |||||||||||||| ||||||||
Sbjct: 1238 acttgatcagagcctcagagattacatgggcgatgcagc 1276



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 491  tacaagaaccctgtggtcatgatccacgagaacggagc 528
            |||||||||||| | ||||||||||| ||||| |||||
Sbjct: 1398 tacaagaaccctattgtcatgatccatgagaatggagc 1435
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>dbj|AK102869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111O12, full
            insert sequence
          Length = 1993

 Score =  268 bits (135), Expect = 2e-68
 Identities = 333/399 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    agagccctatatagtaactcaccatcttctgcttgcacatgcttcggcagtgtccctgta 60
            |||||| || |||||| | || |||||||| ||||||||| | || ||||||||||| ||
Sbjct: 812  agagccatacatagtagcacatcatcttcttcttgcacattcctcagcagtgtccctcta 871

                                                                        
Query: 61   taaagagaagtaccaggacaagcaaggtggaaaaattggactcacattgctcggttcgtg 120
             | |||||||||||||| ||  ||||| ||| ||||||| |||||||||||||||| |||
Sbjct: 872  cagagagaagtaccaggccactcaaggaggacaaattgggctcacattgctcggttggtg 931

                                                                        
Query: 121  gaacaagcccgcgacacaaacacctgaggatatagcagcagctgcaaggatgaatgactt 180
            | || |||||| ||| |||   ||||| ||| ||||||||||||||||||||||||| ||
Sbjct: 932  gtacgagcccgggacgcaagatcctgaagatgtagcagcagctgcaaggatgaatgattt 991

                                                                        
Query: 181  ccacattgggtggtatatgcatcctttggtgcatggagattatcccccagtgatgaggaa 240
            ||||||||| ||||| ||||||||||||||| | || || || || || || ||||||||
Sbjct: 992  ccacattggatggtacatgcatcctttggtgtacggtgactaccctccggtaatgaggaa 1051

                                                                        
Query: 241  gaatgttgggtccaggctaccatctttcactgctgaagagctgaagagagtgcttgggtc 300
            |||||||||||||||||||||||||||||| ||||||||    |||||||| ||||  ||
Sbjct: 1052 gaatgttgggtccaggctaccatctttcacagctgaagaatcaaagagagtacttgaatc 1111

                                                                        
Query: 301  ttttgattttgtcggatttaaccactacgccgcctcatatgtgaaggctgatcttagcaa 360
             | |||||||||||||||||||||||| | ||||   | |||||  || || ||||||||
Sbjct: 1112 ctatgattttgtcggatttaaccactatgtcgccatttttgtgagagccgaccttagcaa 1171

                                                   
Query: 361  gctggatcagaagctgagagattacatgggtgatgcagc 399
             || |||||||  || |||||||||||| | ||||||||
Sbjct: 1172 acttgatcagagcctcagagattacatgagcgatgcagc 1210



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 491  tacaagaaccctgtggtcatgatccacgagaacggagc 528
            |||||||||||| | ||||||||||| ||||| |||||
Sbjct: 1332 tacaagaaccctattgtcatgatccatgagaatggagc 1369
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>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0065A15, complete sequence
          Length = 168806

 Score =  135 bits (68), Expect = 2e-28
 Identities = 173/208 (83%)
 Strand = Plus / Minus

                                                                         
Query: 192   ggtatatgcatcctttggtgcatggagattatcccccagtgatgaggaagaatgttgggt 251
             |||| ||||||||||||||| | || || || || || || |||||||||||||||||||
Sbjct: 72474 ggtacatgcatcctttggtgtacggtgactaccctccggtaatgaggaagaatgttgggt 72415

                                                                         
Query: 252   ccaggctaccatctttcactgctgaagagctgaagagagtgcttgggtcttttgattttg 311
             ||||||||||||||||||| ||||||||    |||||||| ||||  || | ||||||||
Sbjct: 72414 ccaggctaccatctttcacagctgaagaatcaaagagagtacttgaatcctatgattttg 72355

                                                                         
Query: 312   tcggatttaaccactacgccgcctcatatgtgaaggctgatcttagcaagctggatcaga 371
             |||||||||||||||| | ||||   | |||||  || || |||||||| || |||||||
Sbjct: 72354 tcggatttaaccactatgtcgccatttttgtgagagccgaccttagcaaacttgatcaga 72295

                                         
Query: 372   agctgagagattacatgggtgatgcagc 399
               || |||||||||||||| ||||||||
Sbjct: 72294 gcctcagagattacatgggcgatgcagc 72267



 Score =  103 bits (52), Expect = 6e-19
 Identities = 97/112 (86%)
 Strand = Plus / Minus

                                                                         
Query: 83    caaggtggaaaaattggactcacattgctcggttcgtggaacaagcccgcgacacaaaca 142
             ||||| ||| ||||||| |||||||||||||||| |||| || |||||| ||| |||   
Sbjct: 72677 caaggaggacaaattgggctcacattgctcggttggtggtacgagcccgggacgcaagat 72618

                                                                 
Query: 143   cctgaggatatagcagcagctgcaaggatgaatgacttccacattgggtggt 194
             ||||| ||| ||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 72617 cctgaagatgtagcagcagctgcaaggatgaatgatttccacattggatggt 72566



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                         
Query: 1     agagccctatatagtaactcaccatcttctgcttgcacatgcttcggcagtgtccctgta 60
             |||||| || |||||| | || |||||||| ||||||||| | || ||||||||||| ||
Sbjct: 72845 agagccatacatagtagcacatcatcttcttcttgcacattcctcagcagtgtccctcta 72786

                              
Query: 61    taaagagaagtaccagg 77
              | ||||||||||||||
Sbjct: 72785 cagagagaagtaccagg 72769



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 198   tgcatcctttggtgcatggagattatcccccagtgatgagga 239
             |||||||||||||||| ||||| || || || ||||||||||
Sbjct: 99665 tgcatcctttggtgcacggagactaccctccggtgatgagga 99624



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 18    ctcaccatcttctgcttgcacatgcttcggcagtgtcc 55
             ||||||| || |||||||| ||||| ||||||||||||
Sbjct: 90796 ctcaccacctgctgcttgctcatgcctcggcagtgtcc 90759



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 491   tacaagaaccctgtggtcatgatccacgagaa 522
             |||||||||||| | ||||||||||| |||||
Sbjct: 71917 tacaagaaccctattgtcatgatccatgagaa 71886
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  135 bits (68), Expect = 2e-28
 Identities = 173/208 (83%)
 Strand = Plus / Minus

                                                                            
Query: 192      ggtatatgcatcctttggtgcatggagattatcccccagtgatgaggaagaatgttgggt 251
                |||| ||||||||||||||| | || || || || || || |||||||||||||||||||
Sbjct: 19589399 ggtacatgcatcctttggtgtacggtgactaccctccggtaatgaggaagaatgttgggt 19589340

                                                                            
Query: 252      ccaggctaccatctttcactgctgaagagctgaagagagtgcttgggtcttttgattttg 311
                ||||||||||||||||||| ||||||||    |||||||| ||||  || | ||||||||
Sbjct: 19589339 ccaggctaccatctttcacagctgaagaatcaaagagagtacttgaatcctatgattttg 19589280

                                                                            
Query: 312      tcggatttaaccactacgccgcctcatatgtgaaggctgatcttagcaagctggatcaga 371
                |||||||||||||||| | ||||   | |||||  || || |||||||| || |||||||
Sbjct: 19589279 tcggatttaaccactatgtcgccatttttgtgagagccgaccttagcaaacttgatcaga 19589220

                                            
Query: 372      agctgagagattacatgggtgatgcagc 399
                  || |||||||||||||| ||||||||
Sbjct: 19589219 gcctcagagattacatgggcgatgcagc 19589192



 Score =  103 bits (52), Expect = 6e-19
 Identities = 97/112 (86%)
 Strand = Plus / Minus

                                                                            
Query: 83       caaggtggaaaaattggactcacattgctcggttcgtggaacaagcccgcgacacaaaca 142
                ||||| ||| ||||||| |||||||||||||||| |||| || |||||| ||| |||   
Sbjct: 19589602 caaggaggacaaattgggctcacattgctcggttggtggtacgagcccgggacgcaagat 19589543

                                                                    
Query: 143      cctgaggatatagcagcagctgcaaggatgaatgacttccacattgggtggt 194
                ||||| ||| ||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 19589542 cctgaagatgtagcagcagctgcaaggatgaatgatttccacattggatggt 19589491



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                            
Query: 1        agagccctatatagtaactcaccatcttctgcttgcacatgcttcggcagtgtccctgta 60
                |||||| || |||||| | || |||||||| ||||||||| | || ||||||||||| ||
Sbjct: 19589770 agagccatacatagtagcacatcatcttcttcttgcacattcctcagcagtgtccctcta 19589711

                                 
Query: 61       taaagagaagtaccagg 77
                 | ||||||||||||||
Sbjct: 19589710 cagagagaagtaccagg 19589694



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 198      tgcatcctttggtgcatggagattatcccccagtgatgagga 239
                |||||||||||||||| ||||| || || || ||||||||||
Sbjct: 19616590 tgcatcctttggtgcacggagactaccctccggtgatgagga 19616549



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 18       ctcaccatcttctgcttgcacatgcttcggcagtgtcc 55
                ||||||| || |||||||| ||||| ||||||||||||
Sbjct: 19607721 ctcaccacctgctgcttgctcatgcctcggcagtgtcc 19607684



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 491      tacaagaaccctgtggtcatgatccacgagaa 522
                |||||||||||| | ||||||||||| |||||
Sbjct: 19588842 tacaagaaccctattgtcatgatccatgagaa 19588811
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>dbj|AK066336.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063O11, full
           insert sequence
          Length = 1919

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Plus

                                                                       
Query: 167 aggatgaatgacttccacattgggtggtatatgcatcctttggtgcatggagattatccc 226
           ||||||||||| ||||| ||||| |||| | |||||||||||||||| ||||| || || 
Sbjct: 871 aggatgaatgaattccatattggatggtttttgcatcctttggtgcacggagactaccct 930

                        
Query: 227 ccagtgatgagga 239
           || ||||||||||
Sbjct: 931 ccggtgatgagga 943
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>dbj|AK101420.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033038B10, full
           insert sequence
          Length = 2126

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 167 aggatgaatgacttccacattgggtggtatatgcatcctttggtgcatggaga 219
           ||||||||||| ||||| ||||| |||| |||| ||||| |||||||||||||
Sbjct: 874 aggatgaatgaattccatattggatggtttatgaatcctctggtgcatggaga 926



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 18  ctcaccatcttctgcttgcacatgcttcggcagtgtcc 55
           ||||||| || |||||||| ||||| ||||||||||||
Sbjct: 715 ctcaccacctgctgcttgctcatgcctcggcagtgtcc 752
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>gb|AC158901.5| Mus musculus chromosome 15, clone RP23-77K13, complete sequence
          Length = 192643

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 362   ctggatcagaagctgagagattacatg 388
             ||||| |||||||||||||||||||||
Sbjct: 43112 ctggaacagaagctgagagattacatg 43138
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>gb|AC137974.13| Mus musculus chromosome 15, clone RP23-17J3, complete sequence
          Length = 219617

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 362  ctggatcagaagctgagagattacatg 388
            ||||| |||||||||||||||||||||
Sbjct: 1687 ctggaacagaagctgagagattacatg 1713
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>dbj|AP006752.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1399_D07, complete sequence
          Length = 65000

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 198   tgcatcctttggtgcatggagattatcccccagtgatgagga 239
             |||||||||||||||| ||||| || || || ||||||||||
Sbjct: 26072 tgcatcctttggtgcacggagactaccctccggtgatgagga 26031



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 18    ctcaccatcttctgcttgcacatgcttcggcagtgtcc 55
             ||||||| || |||||||| ||||| ||||||||||||
Sbjct: 17203 ctcaccacctgctgcttgctcatgcctcggcagtgtcc 17166
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>ref|XM_803631.1| Trypanosoma cruzi strain CL Brener protein kinase
            (Tc00.1047053507683.40) partial mRNA
          Length = 3648

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 140  acacctgaggatatagcagcagctg 164
            |||||||||||||| ||||||||||
Sbjct: 3436 acacctgaggatatggcagcagctg 3460
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>emb|AL589738.6| Mouse DNA sequence from clone RP23-322J11 on chromosome 13 Contains the
              Foxq1 gene for forkhead box Q1 (Hfh1l), two novel genes and
              two CpG islands, complete sequence
          Length = 187709

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 423    tttttgacttaaagaaccagt 443
              |||||||||||||||||||||
Sbjct: 182157 tttttgacttaaagaaccagt 182137
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>gb|AC022909.13| Homo sapiens chromosome 8, clone RP11-682G1, complete sequence
          Length = 182241

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 279   agctgaagagagtgcttgggt 299
             |||||||||||||||||||||
Sbjct: 10870 agctgaagagagtgcttgggt 10850
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>gb|AC104233.2| Homo sapiens chromosome 8, clone RP11-3G20, complete sequence
          Length = 152440

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 279   agctgaagagagtgcttgggt 299
             |||||||||||||||||||||
Sbjct: 49389 agctgaagagagtgcttgggt 49409
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>gb|AC154136.13| Mus musculus  BAC RP23-184A3 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 220233

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 360    agctggatcagaagctgagag 380
              |||||||||||||||||||||
Sbjct: 179638 agctggatcagaagctgagag 179658
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>dbj|AP005360.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1529G8, complete
             sequence
          Length = 147788

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 279   agctgaagagagtgcttgggt 299
             |||||||||||||||||||||
Sbjct: 69176 agctgaagagagtgcttgggt 69196
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>gb|AC165118.3| Oryctolagus cuniculus, clone Oryctolagus cuniculus-16788057J9, complete
             sequence
          Length = 40531

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 359   aagctggatcagaagctgag 378
             ||||||||||||||||||||
Sbjct: 16510 aagctggatcagaagctgag 16529
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>gb|AC182655.2| Populus trichocarpa clone Pop1-121O5, complete sequence
          Length = 87839

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 469   gctggagcatctccaggtcaaata 492
             ||||||||||||||||| ||||||
Sbjct: 75311 gctggagcatctccaggccaaata 75334
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>gb|AC122844.4| Mus musculus BAC clone RP23-152A2 from 7, complete sequence
          Length = 194266

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 368   cagaagctgagagattacat 387
             ||||||||||||||||||||
Sbjct: 98608 cagaagctgagagattacat 98627
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>gb|AC144399.2| Oryctolagus cuniculus clone LBNL1-125D4, complete sequence
          Length = 191541

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 359    aagctggatcagaagctgag 378
              ||||||||||||||||||||
Sbjct: 170175 aagctggatcagaagctgag 170194
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>gb|BC047222.1| Homo sapiens transmembrane protease, serine 5 (spinesin), mRNA
           (cDNA clone IMAGE:5300744), containing frame-shift
           errors
          Length = 1826

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 530 gccagcgtggctgatccctc 549
           ||||||||||||||||||||
Sbjct: 274 gccagcgtggctgatccctc 255
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>gb|BC028065.1| Homo sapiens transmembrane protease, serine 5 (spinesin), mRNA
           (cDNA clone IMAGE:5199737), with apparent retained
           intron
          Length = 2055

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 530 gccagcgtggctgatccctc 549
           ||||||||||||||||||||
Sbjct: 311 gccagcgtggctgatccctc 292
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>ref|NM_030770.1| Homo sapiens transmembrane protease, serine 5 (spinesin) (TMPRSS5),
           mRNA
          Length = 2265

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 530 gccagcgtggctgatccctc 549
           ||||||||||||||||||||
Sbjct: 549 gccagcgtggctgatccctc 530
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>emb|CT030740.8| Mouse DNA sequence from clone RP24-312D7 on chromosome 17, complete
             sequence
          Length = 215154

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    ctgtataaagagaagtacca 75
             ||||||||||||||||||||
Sbjct: 40778 ctgtataaagagaagtacca 40797
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>dbj|AP002436.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-627G1, complete
              sequence
          Length = 173509

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 530    gccagcgtggctgatccctc 549
              ||||||||||||||||||||
Sbjct: 101940 gccagcgtggctgatccctc 101959
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>dbj|AP003402.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-661I21, complete
              sequence
          Length = 187946

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 530    gccagcgtggctgatccctc 549
              ||||||||||||||||||||
Sbjct: 179535 gccagcgtggctgatccctc 179554
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>gb|AC091332.8| Mus musculus chromosome 17, clone RP23-12K1, complete sequence
          Length = 216370

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     ctgtataaagagaagtacca 75
              ||||||||||||||||||||
Sbjct: 164580 ctgtataaagagaagtacca 164599
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>gb|AC167922.2| Mycosphaerella graminicola clone JGIBBWB-5J8, complete sequence
          Length = 40667

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 254   aggctaccatctttcactgc 273
             ||||||||||||||||||||
Sbjct: 37077 aggctaccatctttcactgc 37058
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>emb|AL627211.13| Mouse DNA sequence from clone RP23-104G20 on chromosome 4, complete
             sequence
          Length = 216944

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 350   gatcttagcaagctggatcagaag 373
             ||||||||||||||| ||||||||
Sbjct: 99441 gatcttagcaagctgtatcagaag 99418
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>dbj|AB028140.1| Homo sapiens mRNA for spinesin, complete cds
          Length = 2265

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 530 gccagcgtggctgatccctc 549
           ||||||||||||||||||||
Sbjct: 549 gccagcgtggctgatccctc 530


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,127,167
Number of Sequences: 3902068
Number of extensions: 5127167
Number of successful extensions: 101569
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101441
Number of HSP's gapped (non-prelim): 118
length of query: 558
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 535
effective length of database: 17,143,297,704
effective search space: 9171664271640
effective search space used: 9171664271640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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