ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags36h10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483854.1| Oryza sativa (japonica cultivar-group), mRNA 311 2e-81
2dbj|AK065186.1| Oryza sativa (japonica cultivar-group) cDNA clon... 311 2e-81
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
4dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
5gb|AY103941.1| Zea mays PCO095480 mRNA sequence 139 1e-29
6gb|AC168062.3| Mus musculus BAC clone RP23-191D8 from chromosome... 42 2.2
7gb|AC154627.2| Mus musculus BAC clone RP23-312J2 from chromosome... 42 2.2
8gb|AC133498.2| Mus musculus BAC clone RP24-241K8 from chromosome... 42 2.2
9gb|AC092982.3| Homo sapiens 3q BAC RP11-758I14 (Roswell Park Can... 42 2.2
10gb|AC103749.2| Homo sapiens chromosome 15, clone RP11-4F5, compl... 42 2.2
11gb|AC093914.3| Homo sapiens BAC clone RP11-779N9 from 4, complet... 42 2.2
12gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome 42 2.2
13gb|AC135626.4| Homo sapiens chromosome 15, clone RP11-354B3, com... 42 2.2
14gb|AC153118.4| Monodelphis domestica clone VMRC6-501L16, complet... 42 2.2
15gb|AC148214.3| Monodelphis domestica clone VMRC6-307F8, complete... 42 2.2
16gb|AC006499.13|AC006499 Homo sapiens chromosome 4 clone C0494H11... 42 2.2
17gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold 42 2.2
18emb|AL391155.3|CNS06C81 Human chromosome 14 DNA sequence BAC R-5... 42 2.2
19gb|AC122352.4| Mus musculus BAC clone RP23-389C11 from chromosom... 40 8.9
20ref|XM_533169.2| PREDICTED: Canis familiaris similar to macropha... 40 8.9
21emb|AL589703.6| Human DNA sequence from clone RP11-127L21 on chr... 40 8.9
22emb|AL365214.16| Human DNA sequence from clone RP11-506B6 on chr... 40 8.9
23emb|AL157775.15| Human DNA sequence from clone RP11-525O21 on ch... 40 8.9
24emb|BX640406.9| Zebrafish DNA sequence from clone DKEY-187A3 in ... 40 8.9
25emb|CR387987.6| Zebrafish DNA sequence from clone CH211-35M4 in ... 40 8.9
26emb|BX571943.8| Zebrafish DNA sequence from clone DKEY-159C24 in... 40 8.9
27emb|BX470097.9| Zebrafish DNA sequence from clone DKEYP-114E10 i... 40 8.9
28gb|AF418272.1|AF418272 Homo sapiens coagulation factor XIII, A1 ... 40 8.9
29emb|BX004804.10| Zebrafish DNA sequence from clone CH211-39M5 in... 40 8.9
30gb|AC154430.3| Mus musculus BAC clone RP24-208K8 from chromosome... 40 8.9
31gb|AC138024.2| Homo sapiens chromosome 1 clone RP5-1099E6, compl... 40 8.9
32gb|AC119429.3| Homo sapiens chromosome 1 clone RP4-723P6, comple... 40 8.9
33gb|AC006434.5|AC006434 Genomic sequence for Arabidopsis thaliana... 40 8.9
34dbj|BS000201.1| Pan troglodytes chromosome 22 clone:PTB-047A24, ... 40 8.9
35gb|AC004982.1|AC004982 Homo sapiens PAC clone RP5-1159O4 from 7p... 40 8.9 
>ref|XM_483854.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1538

 Score =  311 bits (157), Expect = 2e-81
 Identities = 301/349 (86%)
 Strand = Plus / Plus

                                                                        
Query: 4    gcaaattaaacatcccattgaagagtggaaacagtcttactttgctcctcaagaaggaag 63
            ||||||| | ||| || ||| |||||||| | ||||||||||||||  | |  |||||||
Sbjct: 754  gcaaattgatcattcccttggagagtggagaaagtcttactttgcttattacaaaggaag 813

                                                                        
Query: 64   tagacgttgaatttgcatccagcttgatctcccttcacaaaaccatcaaaagcggtattc 123
             |||| | ||||||||||||||||||||||||||||  ||||| || ||||| |||||||
Sbjct: 814  cagacatggaatttgcatccagcttgatctcccttcgtaaaactataaaaaggggtattc 873

                                                                        
Query: 124  aggttcacgaagatttctcaggaggcatcgtgagccctgcagagttattagtatgccact 183
            ||||||| |||||||||||||||||  || ||||||||||||||||||||||||||||||
Sbjct: 874  aggttcatgaagatttctcaggaggtgtcatgagccctgcagagttattagtatgccact 933

                                                                        
Query: 184  tcacgggcattaaggctctggaagatgaatatggttccacagaaattgtcaagcagggag 243
            |||  |||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| 
Sbjct: 934  tcaaaggcattaaggctttggaagaagaatatggttccacagaaattgttaagcagggaa 993

                                                                        
Query: 244  ctgaagtagttcaaacagctctcaccaaagcatttaatcaactgcagggagcatataacg 303
            |||| ||||| |  |||||| |||||||||||||| ||  ||| |  ||||||||||| |
Sbjct: 994  ctgatgtagtccggacagctgtcaccaaagcatttgatttactacgtggagcatataatg 1053

                                                             
Query: 304  ggaaacttgttgggctggtaatatccactaaggaggcttcaacatcctt 352
            | ||| |||||||| | ||||||||||| |||||||||||| |||||||
Sbjct: 1054 gaaaaattgttgggttagtaatatccacaaaggaggcttcaccatcctt 1102



 Score =  111 bits (56), Expect = 3e-21
 Identities = 113/132 (85%)
 Strand = Plus / Plus

                                                                        
Query: 450  cttgttagattgagtcttgcatggattacagggatcatccttcttgtctcaaccctcatt 509
            |||||||||  |||| | |||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 1188 cttgttagaaagagtttggcatggattacagggatcattcttcttgtctctactctcatt 1247

                                                                        
Query: 510  gggatttgcctgctcatgaacatgccgcttaccaaggacacgctcctatattcaaatgtc 569
            ||| ||||| |||| ||||| ||||| ||||||| |||||| ||||| ||||| ||||| 
Sbjct: 1248 ggggtttgcttgcttatgaatatgccacttaccagggacaccctcctgtattcgaatgtg 1307

                        
Query: 570  aaaattgattag 581
            || || ||||||
Sbjct: 1308 aagatcgattag 1319
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>dbj|AK065186.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D24, full
            insert sequence
          Length = 1538

 Score =  311 bits (157), Expect = 2e-81
 Identities = 301/349 (86%)
 Strand = Plus / Plus

                                                                        
Query: 4    gcaaattaaacatcccattgaagagtggaaacagtcttactttgctcctcaagaaggaag 63
            ||||||| | ||| || ||| |||||||| | ||||||||||||||  | |  |||||||
Sbjct: 754  gcaaattgatcattcccttggagagtggagaaagtcttactttgcttattacaaaggaag 813

                                                                        
Query: 64   tagacgttgaatttgcatccagcttgatctcccttcacaaaaccatcaaaagcggtattc 123
             |||| | ||||||||||||||||||||||||||||  ||||| || ||||| |||||||
Sbjct: 814  cagacatggaatttgcatccagcttgatctcccttcgtaaaactataaaaaggggtattc 873

                                                                        
Query: 124  aggttcacgaagatttctcaggaggcatcgtgagccctgcagagttattagtatgccact 183
            ||||||| |||||||||||||||||  || ||||||||||||||||||||||||||||||
Sbjct: 874  aggttcatgaagatttctcaggaggtgtcatgagccctgcagagttattagtatgccact 933

                                                                        
Query: 184  tcacgggcattaaggctctggaagatgaatatggttccacagaaattgtcaagcagggag 243
            |||  |||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| 
Sbjct: 934  tcaaaggcattaaggctttggaagaagaatatggttccacagaaattgttaagcagggaa 993

                                                                        
Query: 244  ctgaagtagttcaaacagctctcaccaaagcatttaatcaactgcagggagcatataacg 303
            |||| ||||| |  |||||| |||||||||||||| ||  ||| |  ||||||||||| |
Sbjct: 994  ctgatgtagtccggacagctgtcaccaaagcatttgatttactacgtggagcatataatg 1053

                                                             
Query: 304  ggaaacttgttgggctggtaatatccactaaggaggcttcaacatcctt 352
            | ||| |||||||| | ||||||||||| |||||||||||| |||||||
Sbjct: 1054 gaaaaattgttgggttagtaatatccacaaaggaggcttcaccatcctt 1102



 Score =  111 bits (56), Expect = 3e-21
 Identities = 113/132 (85%)
 Strand = Plus / Plus

                                                                        
Query: 450  cttgttagattgagtcttgcatggattacagggatcatccttcttgtctcaaccctcatt 509
            |||||||||  |||| | |||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 1188 cttgttagaaagagtttggcatggattacagggatcattcttcttgtctctactctcatt 1247

                                                                        
Query: 510  gggatttgcctgctcatgaacatgccgcttaccaaggacacgctcctatattcaaatgtc 569
            ||| ||||| |||| ||||| ||||| ||||||| |||||| ||||| ||||| ||||| 
Sbjct: 1248 ggggtttgcttgcttatgaatatgccacttaccagggacaccctcctgtattcgaatgtg 1307

                        
Query: 570  aaaattgattag 581
            || || ||||||
Sbjct: 1308 aagatcgattag 1319
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  168 bits (85), Expect = 1e-38
 Identities = 127/141 (90%)
 Strand = Plus / Plus

                                                                            
Query: 58       aggaagtagacgttgaatttgcatccagcttgatctcccttcacaaaaccatcaaaagcg 117
                |||||| |||| | ||||||||||||||||||||||||||||  ||||| || ||||| |
Sbjct: 28390387 aggaagcagacatggaatttgcatccagcttgatctcccttcgtaaaactataaaaaggg 28390446

                                                                            
Query: 118      gtattcaggttcacgaagatttctcaggaggcatcgtgagccctgcagagttattagtat 177
                ||||||||||||| |||||||||||||||||  || ||||||||||||||||||||||||
Sbjct: 28390447 gtattcaggttcatgaagatttctcaggaggtgtcatgagccctgcagagttattagtat 28390506

                                     
Query: 178      gccacttcacgggcattaagg 198
                |||||||||  ||||||||||
Sbjct: 28390507 gccacttcaaaggcattaagg 28390527



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 74/83 (89%)
 Strand = Plus / Plus

                                                                            
Query: 196      aggctctggaagatgaatatggttccacagaaattgtcaagcagggagctgaagtagttc 255
                ||||| ||||||| ||||||||||||||||||||||| ||||||||| |||| ||||| |
Sbjct: 28390707 aggctttggaagaagaatatggttccacagaaattgttaagcagggaactgatgtagtcc 28390766

                                       
Query: 256      aaacagctctcaccaaagcattt 278
                  |||||| ||||||||||||||
Sbjct: 28390767 ggacagctgtcaccaaagcattt 28390789



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                            
Query: 450      cttgttagattgagtcttgcatggattacagggatcatccttcttgtctcaaccctcatt 509
                |||||||||  |||| | |||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 28391334 cttgttagaaagagtttggcatggattacagggatcattcttcttgtctctactctcatt 28391393

                   
Query: 510      ggg 512
                |||
Sbjct: 28391394 ggg 28391396



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 310      ttgttgggctggtaatatccactaaggaggcttcaacatcctt 352
                |||||||| | ||||||||||| |||||||||||| |||||||
Sbjct: 28391206 ttgttgggttagtaatatccacaaaggaggcttcaccatcctt 28391248
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>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0044E16
          Length = 153296

 Score =  168 bits (85), Expect = 1e-38
 Identities = 127/141 (90%)
 Strand = Plus / Plus

                                                                          
Query: 58     aggaagtagacgttgaatttgcatccagcttgatctcccttcacaaaaccatcaaaagcg 117
              |||||| |||| | ||||||||||||||||||||||||||||  ||||| || ||||| |
Sbjct: 119193 aggaagcagacatggaatttgcatccagcttgatctcccttcgtaaaactataaaaaggg 119252

                                                                          
Query: 118    gtattcaggttcacgaagatttctcaggaggcatcgtgagccctgcagagttattagtat 177
              ||||||||||||| |||||||||||||||||  || ||||||||||||||||||||||||
Sbjct: 119253 gtattcaggttcatgaagatttctcaggaggtgtcatgagccctgcagagttattagtat 119312

                                   
Query: 178    gccacttcacgggcattaagg 198
              |||||||||  ||||||||||
Sbjct: 119313 gccacttcaaaggcattaagg 119333



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 74/83 (89%)
 Strand = Plus / Plus

                                                                          
Query: 196    aggctctggaagatgaatatggttccacagaaattgtcaagcagggagctgaagtagttc 255
              ||||| ||||||| ||||||||||||||||||||||| ||||||||| |||| ||||| |
Sbjct: 119513 aggctttggaagaagaatatggttccacagaaattgttaagcagggaactgatgtagtcc 119572

                                     
Query: 256    aaacagctctcaccaaagcattt 278
                |||||| ||||||||||||||
Sbjct: 119573 ggacagctgtcaccaaagcattt 119595



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                          
Query: 450    cttgttagattgagtcttgcatggattacagggatcatccttcttgtctcaaccctcatt 509
              |||||||||  |||| | |||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 120140 cttgttagaaagagtttggcatggattacagggatcattcttcttgtctctactctcatt 120199

                 
Query: 510    ggg 512
              |||
Sbjct: 120200 ggg 120202



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                         
Query: 310    ttgttgggctggtaatatccactaaggaggcttcaacatcctt 352
              |||||||| | ||||||||||| |||||||||||| |||||||
Sbjct: 120012 ttgttgggttagtaatatccacaaaggaggcttcaccatcctt 120054
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>gb|AY103941.1| Zea mays PCO095480 mRNA sequence
          Length = 1596

 Score =  139 bits (70), Expect = 1e-29
 Identities = 234/288 (81%), Gaps = 3/288 (1%)
 Strand = Plus / Plus

                                                                        
Query: 123  caggttcacgaagatttctcaggaggcatcgtgagccctgcagagttattagtatgccac 182
            |||||||| |||||||||||||| |   |||||| ||||||||||||||||| ||| |||
Sbjct: 780  caggttcatgaagatttctcaggtg---tcgtgaaccctgcagagttattagaatgtcac 836

                                                                        
Query: 183  ttcacgggcattaaggctctggaagatgaatatggttccacagaaattgtcaagcaggga 242
            ||||| ||  | |||||||||||  |||||||||||||    |||||||| |||||||||
Sbjct: 837  ttcacagggttgaaggctctggagaatgaatatggttctggtgaaattgttaagcaggga 896

                                                                        
Query: 243  gctgaagtagttcaaacagctctcaccaaagcatttaatcaactgcagggagcatataac 302
             | ||| ||||||| | |||| |||||||| ||||  |    || || | |||||| || 
Sbjct: 897  acagaaatagttcagagagctgtcaccaaatcattccagtccctacatgaagcatacaaa 956

                                                                        
Query: 303  gggaaacttgttgggctggtaatatccactaaggaggcttcaacatccttggcatccatc 362
            |||||| |||||||||||||||||||||| || |||||| || ||||||| | |||||| 
Sbjct: 957  gggaaaattgttgggctggtaatatccacaaatgaggctccatcatccttaggatccata 1016

                                                            
Query: 363  actgatggaccgtcttcactgcatatctcaagactgcttgcagaagca 410
            | ||| | ||| ||||||||||| || ||||||| ||| | |||||||
Sbjct: 1017 attgacgcaccatcttcactgcacatttcaagacggctagaagaagca 1064



 Score =  115 bits (58), Expect = 2e-22
 Identities = 103/118 (87%)
 Strand = Plus / Plus

                                                                        
Query: 468  gcatggattacagggatcatccttcttgtctcaaccctcattgggatttgcctgctcatg 527
            ||||||||||||||||||||||| ||||| ||||| ||||| ||| ||||| |||| |||
Sbjct: 1113 gcatggattacagggatcatcctgcttgtttcaactctcataggggtttgcttgcttatg 1172

                                                                      
Query: 528  aacatgccgcttaccaaggacacgctcctatattcaaatgtcaaaattgattagtttg 585
            |||||||| ||||||| |||||| ||||| || || |||||||| || ||||||||||
Sbjct: 1173 aacatgccacttaccagggacaccctcctgtactcgaatgtcaagatcgattagtttg 1230



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 29  tggaaacagtcttactttgc 48
           ||||||||||||||||||||
Sbjct: 686 tggaaacagtcttactttgc 705
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>gb|AC168062.3| Mus musculus BAC clone RP23-191D8 from chromosome 14, complete sequence
          Length = 174822

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 208    atgaatatggttccacagaaa 228
              |||||||||||||||||||||
Sbjct: 104795 atgaatatggttccacagaaa 104815



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 208   atgaatatggttccacagaaa 228
             |||||||||||||||||||||
Sbjct: 17523 atgaatatggttccacagaaa 17503
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>gb|AC154627.2| Mus musculus BAC clone RP23-312J2 from chromosome 14, complete sequence
          Length = 225640

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 208    atgaatatggttccacagaaa 228
              |||||||||||||||||||||
Sbjct: 212429 atgaatatggttccacagaaa 212409
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>gb|AC133498.2| Mus musculus BAC clone RP24-241K8 from chromosome 13, complete sequence
          Length = 159112

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 583   ttgtgctgcatatgaattttc 603
             |||||||||||||||||||||
Sbjct: 13749 ttgtgctgcatatgaattttc 13729
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>gb|AC092982.3| Homo sapiens 3q BAC RP11-758I14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 189219

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 564   aatgtcaaaattgattagttt 584
             |||||||||||||||||||||
Sbjct: 41479 aatgtcaaaattgattagttt 41459
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>gb|AC103749.2| Homo sapiens chromosome 15, clone RP11-4F5, complete sequence
          Length = 190678

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 200    tctggaagatgaatatggttccaca 224
              ||||||||||||| |||||||||||
Sbjct: 163615 tctggaagatgaagatggttccaca 163591
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>gb|AC093914.3| Homo sapiens BAC clone RP11-779N9 from 4, complete sequence
          Length = 170536

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 582    tttgtgctgcatatgaatttt 602
              |||||||||||||||||||||
Sbjct: 108920 tttgtgctgcatatgaatttt 108900
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>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome
          Length = 2679306

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 461     gagtcttgcatggattacagg 481
               |||||||||||||||||||||
Sbjct: 2576553 gagtcttgcatggattacagg 2576573
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>gb|AC135626.4| Homo sapiens chromosome 15, clone RP11-354B3, complete sequence
          Length = 180684

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 200   tctggaagatgaatatggttccaca 224
             ||||||||||||| |||||||||||
Sbjct: 19502 tctggaagatgaagatggttccaca 19478
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>gb|AC153118.4| Monodelphis domestica clone VMRC6-501L16, complete sequence
          Length = 61064

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 551   gctcctatattcaaatgtcaa 571
             |||||||||||||||||||||
Sbjct: 36532 gctcctatattcaaatgtcaa 36552
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>gb|AC148214.3| Monodelphis domestica clone VMRC6-307F8, complete sequence
          Length = 163118

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 551  gctcctatattcaaatgtcaa 571
            |||||||||||||||||||||
Sbjct: 1989 gctcctatattcaaatgtcaa 2009
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>gb|AC006499.13|AC006499 Homo sapiens chromosome 4 clone C0494H11, complete sequence
          Length = 195384

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 396   ctgcttgcagaagcatctaaa 416
             |||||||||||||||||||||
Sbjct: 10151 ctgcttgcagaagcatctaaa 10131
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>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold
          Length = 1833844

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 551    gctcctatattcaaatgtcaa 571
              |||||||||||||||||||||
Sbjct: 244832 gctcctatattcaaatgtcaa 244852
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>emb|AL391155.3|CNS06C81 Human chromosome 14 DNA sequence BAC R-559M6 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 160550

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 318   ctggtaatatccactaaggaggctt 342
             ||||||||| |||||||||||||||
Sbjct: 35920 ctggtaataaccactaaggaggctt 35944
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>gb|AC122352.4| Mus musculus BAC clone RP23-389C11 from chromosome 16, complete sequence
          Length = 196519

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 350    cttggcatccatcactgatg 369
              ||||||||||||||||||||
Sbjct: 155531 cttggcatccatcactgatg 155550
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>ref|XM_533169.2| PREDICTED: Canis familiaris similar to macrophage expressed gene 1
            (LOC475960), mRNA
          Length = 3145

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 350  cttggcatccatcactgatg 369
            ||||||||||||||||||||
Sbjct: 1762 cttggcatccatcactgatg 1743
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>emb|AL589703.6| Human DNA sequence from clone RP11-127L21 on chromosome 9 Contains a
             novel gene and a pseudogene similar to part of tubulin
             beta chain, complete sequence
          Length = 48697

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    ccttcacaaaaccatcaaaa 114
             ||||||||||||||||||||
Sbjct: 36866 ccttcacaaaaccatcaaaa 36885
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>emb|AL365214.16| Human DNA sequence from clone RP11-506B6 on chromosome 6 Contains a
             fem-1 homolog a (C. elegans) (FEM1A) pseudogene, a keratin
             18 (KRT18) pseudogene, a laminin receptor 1 (67kD,
             ribosomal protein SA) (LAMR1)(RPSA) pseudogene, a
             hepatocellular carcinoma-related putative tumor suppressor
             (LPTS) pseudogene and the 3' end of a novel gene, complete
             sequence
          Length = 210107

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 581   gtttgtgctgcatatgaatt 600
             ||||||||||||||||||||
Sbjct: 99735 gtttgtgctgcatatgaatt 99716
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>emb|AL157775.15| Human DNA sequence from clone RP11-525O21 on chromosome 6 Contains the 3'
              end of the F13A1 gene for coagulation factor XIII, A1
              polypeptide, complete sequence
          Length = 163960

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 77     tgcatccagcttgatctcccttca 100
              ||||||||||||| ||||||||||
Sbjct: 116123 tgcatccagcttgctctcccttca 116100
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>emb|BX640406.9| Zebrafish DNA sequence from clone DKEY-187A3 in linkage group 13,
              complete sequence
          Length = 149208

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 555    ctatattcaaatgtcaaaat 574
              ||||||||||||||||||||
Sbjct: 105833 ctatattcaaatgtcaaaat 105852
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>emb|CR387987.6| Zebrafish DNA sequence from clone CH211-35M4 in linkage group 3,
             complete sequence
          Length = 60218

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   ttcaaacagctctcaccaaa 272
             ||||||||||||||||||||
Sbjct: 11526 ttcaaacagctctcaccaaa 11545
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>emb|BX571943.8| Zebrafish DNA sequence from clone DKEY-159C24 in linkage group 13,
              complete sequence
          Length = 193538

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 555    ctatattcaaatgtcaaaat 574
              ||||||||||||||||||||
Sbjct: 143960 ctatattcaaatgtcaaaat 143941
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>emb|BX470097.9| Zebrafish DNA sequence from clone DKEYP-114E10 in linkage group 5,
             complete sequence
          Length = 96967

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    tcccttcacaaaaccatcaa 112
             ||||||||||||||||||||
Sbjct: 69469 tcccttcacaaaaccatcaa 69488
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>gb|AF418272.1|AF418272 Homo sapiens coagulation factor XIII, A1 polypeptide (F13A1) gene,
              complete cds
          Length = 178952

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 77     tgcatccagcttgatctcccttca 100
              ||||||||||||| ||||||||||
Sbjct: 164660 tgcatccagcttgctctcccttca 164683
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>emb|BX004804.10| Zebrafish DNA sequence from clone CH211-39M5 in linkage group 5,
             complete sequence
          Length = 170010

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    tcccttcacaaaaccatcaa 112
             ||||||||||||||||||||
Sbjct: 63734 tcccttcacaaaaccatcaa 63753
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>gb|AC154430.3| Mus musculus BAC clone RP24-208K8 from chromosome 16, complete
            sequence
          Length = 178222

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 350  cttggcatccatcactgatg 369
            ||||||||||||||||||||
Sbjct: 2251 cttggcatccatcactgatg 2270
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>gb|AC138024.2| Homo sapiens chromosome 1 clone RP5-1099E6, complete sequence
          Length = 163815

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     tagcaaattaaacatcccat 21
             ||||||||||||||||||||
Sbjct: 23206 tagcaaattaaacatcccat 23187
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>gb|AC119429.3| Homo sapiens chromosome 1 clone RP4-723P6, complete sequence
          Length = 115940

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     tagcaaattaaacatcccat 21
             ||||||||||||||||||||
Sbjct: 38674 tagcaaattaaacatcccat 38655
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>gb|AC006434.5|AC006434 Genomic sequence for Arabidopsis thaliana BAC F10A5, complete sequence
          Length = 129547

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 484   tcatccttcttgtctcaacc 503
             ||||||||||||||||||||
Sbjct: 15806 tcatccttcttgtctcaacc 15825
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>dbj|BS000201.1| Pan troglodytes chromosome 22 clone:PTB-047A24, map 22, complete
             sequences
          Length = 165662

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 618   aagttttcaacagtcatgct 637
             ||||||||||||||||||||
Sbjct: 36648 aagttttcaacagtcatgct 36629
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>gb|AC004982.1|AC004982 Homo sapiens PAC clone RP5-1159O4 from 7p21-p22, complete sequence
          Length = 130027

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 484   tcatccttcttgtctcaacc 503
             ||||||||||||||||||||
Sbjct: 79657 tcatccttcttgtctcaacc 79676


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,990,352
Number of Sequences: 3902068
Number of extensions: 5990352
Number of successful extensions: 107115
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106989
Number of HSP's gapped (non-prelim): 121
length of query: 650
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 627
effective length of database: 17,143,297,704
effective search space: 10748847660408
effective search space used: 10748847660408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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