ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags36h07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_549869.1| Oryza sativa (japonica cultivar-group), mRNA 220 4e-54
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 220 4e-54
3dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic D... 220 4e-54
4dbj|AK121497.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 4e-54
5ref|XM_493857.1| Oryza sativa (japonica cultivar-group), predic... 145 2e-31
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
7gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome... 145 2e-31
8gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome... 145 2e-31
9ref|NM_102265.2| Arabidopsis thaliana unknown protein AT1G24190 ... 62 2e-06
10gb|AC002396.1| Arabidopsis thaliana chromosome I BAC F3I6 genomi... 62 2e-06
11gb|AC182706.2| Populus trichocarpa clone Pop1-79P19, complete se... 58 4e-05
12gb|AC146588.14| Medicago truncatula clone mth2-145c3, complete s... 56 1e-04
13dbj|AP004928.1| Lotus japonicus genomic DNA, chromosome 2, clone... 50 0.009
14gb|AC137832.40| Medicago truncatula clone mth2-22i17, complete s... 48 0.036
15emb|CT571260.1| Medicago truncatula chromosome 5 clone mth2-35p1... 46 0.14
16gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 44 0.55
17gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. F... 44 0.55
18gb|CP000040.1| Bacillus cereus E33L plasmid pE33L466, complete s... 42 2.2
19dbj|AP001302.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 2.2
20emb|AL928973.3| Mouse DNA sequence from clone RP23-259J7 on chro... 42 2.2
21ref|NM_103009.3| Arabidopsis thaliana HAF01; DNA binding AT1G327... 40 8.7
22gb|AC134908.5| Mus musculus BAC clone RP23-377L13 from chromosom... 40 8.7
23gb|AF510669.1| Arabidopsis thaliana HAF1 mRNA, complete cds 40 8.7
24gb|AC132429.2| Mus musculus BAC clone RP23-203O20 from chromosom... 40 8.7
25ref|XM_660228.1| Cryptosporidium hominis TU502 OSK4 (Chro.60086)... 40 8.7
26ref|XM_780233.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.7
27emb|BX538353.1| Cryptosporidium parvum chromosome 6, complete se... 40 8.7
28emb|AL929359.1|PFA929359 Plasmodium falciparum strain 3D7, chrom... 40 8.7
29emb|BX284633.6| Mouse DNA sequence from clone RP23-15F8 on chrom... 40 8.7
30gb|AC097658.2| Homo sapiens BAC clone RP11-364L4 from 4, complet... 40 8.7
31ref|XM_627844.1| Cryptosporidium parvum Iowa II transcription el... 40 8.7
32gb|DQ021880.1| Homo sapiens GRB2-associated binding protein 1 (G... 40 8.7
33gb|AC013731.10| Homo sapiens BAC clone RP11-546J1 from 2, comple... 40 8.7
34gb|AC017118.3|AC017118 Genomic sequence for Arabidopsis thaliana... 40 8.7
35gb|AC140918.1| Caenorhabditis briggsae cosmid CB020L07, complete... 40 8.7
36dbj|AK074381.1| Homo sapiens cDNA FLJ23801 fis, clone HEP22544 40 8.7
37dbj|AP006631.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 8.7
38emb|AL691500.7| Mouse DNA sequence from clone RP23-182H15 on chr... 40 8.7 
>ref|XM_549869.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4570

 Score =  220 bits (111), Expect = 4e-54
 Identities = 193/219 (88%), Gaps = 6/219 (2%)
 Strand = Plus / Plus

                                                                        
Query: 236  tgaggaaagcactcaaaggtctaccgaggacagtgaaaatgcttctgaggctggtgaaga 295
            |||||||||| | ||||||||||||||||||||||| ||||| || |||| |||||||||
Sbjct: 2799 tgaggaaagcgcacaaaggtctaccgaggacagtgagaatgcctccgagggtggtgaaga 2858

                                                                        
Query: 296  tgcatcgggaagtgaatctggtgatggcgagcagtgttctcgtgaagatcatgacgagga 355
            |||||| |||||||||||||||||||| ||| |||| ||||||||||||||||| |||||
Sbjct: 2859 tgcatcaggaagtgaatctggtgatggtgaggagtgctctcgtgaagatcatgatgagga 2918

                                                                        
Query: 356  a---gaagatatggatc---atgatcaggatgcgaaggcagaaagtgagggtgaggcaga 409
            |   |||||||||||||   ||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 2919 agaggaagatatggatcatgatgatcaggatgccaaggctgaaagtgagggtgaggcaga 2978

                                                   
Query: 410  ggggacaactgagaaccatgacgttgaaggaggaatatc 448
             || ||||||||||  ||||| || ||||| ||||||||
Sbjct: 2979 aggaacaactgagacacatgatgtggaagggggaatatc 3017



 Score =  119 bits (60), Expect = 1e-23
 Identities = 105/120 (87%)
 Strand = Plus / Plus

                                                                        
Query: 14   agggcgcctatttaatgaacctgctgcgtcccataatacttcgaaagttgaaagagaaga 73
            |||||||||||| |||||| || |||| ||||| |||||  | |||||||||||||||||
Sbjct: 2550 agggcgcctattcaatgaagcttctgcatcccacaataccccaaaagttgaaagagaaga 2609

                                                                        
Query: 74   aggtgaactatcgccgaatggagattttgaagaggacaactttgtgccttttgaagatgg 133
             |||||| |||| || ||||| ||||||||||||||||| |||| |||||||||||||||
Sbjct: 2610 gggtgaattatctcctaatggggattttgaagaggacaattttgcgccttttgaagatgg 2669



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 119/145 (82%), Gaps = 2/145 (1%)
 Strand = Plus / Plus

                                                                        
Query: 477  gaacgctttctgtactcggctaaaccgctggccaagcatgtaccctcatctttacatggt 536
            |||||||||||  |||| |  ||||| || ||||||||||||||| || |||||||||  
Sbjct: 3031 gaacgctttctacactccgtaaaaccacttgccaagcatgtacccacagctttacatgac 3090

                                                                        
Query: 537  cggga-gaacagatcatcacatatattttatgggaacgattcattttatatcttgttcag 595
            || || ||| || || || | ||||||||||||||| |||||||||||| |  |||||||
Sbjct: 3091 cgagatgaaaag-tcctcgcgtatattttatgggaatgattcattttatgtactgttcag 3149

                                     
Query: 596  gttgcatcagatgctgtatgaaaga 620
            | ||||||||||  |||| ||||||
Sbjct: 3150 gctgcatcagatcttgtacgaaaga 3174
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score =  220 bits (111), Expect = 4e-54
 Identities = 193/219 (88%), Gaps = 6/219 (2%)
 Strand = Plus / Minus

                                                                          
Query: 236    tgaggaaagcactcaaaggtctaccgaggacagtgaaaatgcttctgaggctggtgaaga 295
              |||||||||| | ||||||||||||||||||||||| ||||| || |||| |||||||||
Sbjct: 515355 tgaggaaagcgcacaaaggtctaccgaggacagtgagaatgcctccgagggtggtgaaga 515296

                                                                          
Query: 296    tgcatcgggaagtgaatctggtgatggcgagcagtgttctcgtgaagatcatgacgagga 355
              |||||| |||||||||||||||||||| ||| |||| ||||||||||||||||| |||||
Sbjct: 515295 tgcatcaggaagtgaatctggtgatggtgaggagtgctctcgtgaagatcatgatgagga 515236

                                                                          
Query: 356    a---gaagatatggatc---atgatcaggatgcgaaggcagaaagtgagggtgaggcaga 409
              |   |||||||||||||   ||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 515235 agaggaagatatggatcatgatgatcaggatgccaaggctgaaagtgagggtgaggcaga 515176

                                                     
Query: 410    ggggacaactgagaaccatgacgttgaaggaggaatatc 448
               || ||||||||||  ||||| || ||||| ||||||||
Sbjct: 515175 aggaacaactgagacacatgatgtggaagggggaatatc 515137



 Score =  119 bits (60), Expect = 1e-23
 Identities = 105/120 (87%)
 Strand = Plus / Minus

                                                                          
Query: 14     agggcgcctatttaatgaacctgctgcgtcccataatacttcgaaagttgaaagagaaga 73
              |||||||||||| |||||| || |||| ||||| |||||  | |||||||||||||||||
Sbjct: 515604 agggcgcctattcaatgaagcttctgcatcccacaataccccaaaagttgaaagagaaga 515545

                                                                          
Query: 74     aggtgaactatcgccgaatggagattttgaagaggacaactttgtgccttttgaagatgg 133
               |||||| |||| || ||||| ||||||||||||||||| |||| |||||||||||||||
Sbjct: 515544 gggtgaattatctcctaatggggattttgaagaggacaattttgcgccttttgaagatgg 515485



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 107/130 (82%), Gaps = 2/130 (1%)
 Strand = Plus / Minus

                                                                          
Query: 477    gaacgctttctgtactcggctaaaccgctggccaagcatgtaccctcatctttacatggt 536
              |||||||||||  |||| |  ||||| || ||||||||||||||| || |||||||||  
Sbjct: 515123 gaacgctttctacactccgtaaaaccacttgccaagcatgtacccacagctttacatgac 515064

                                                                          
Query: 537    cggga-gaacagatcatcacatatattttatgggaacgattcattttatatcttgttcag 595
              || || ||| || || || | ||||||||||||||| |||||||||||| |  |||||||
Sbjct: 515063 cgagatgaaaag-tcctcgcgtatattttatgggaatgattcattttatgtactgttcag 515005

                        
Query: 596    gttgcatcag 605
              | ||||||||
Sbjct: 515004 gctgcatcag 514995
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>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0482C06
          Length = 182779

 Score =  220 bits (111), Expect = 4e-54
 Identities = 193/219 (88%), Gaps = 6/219 (2%)
 Strand = Plus / Minus

                                                                          
Query: 236    tgaggaaagcactcaaaggtctaccgaggacagtgaaaatgcttctgaggctggtgaaga 295
              |||||||||| | ||||||||||||||||||||||| ||||| || |||| |||||||||
Sbjct: 155556 tgaggaaagcgcacaaaggtctaccgaggacagtgagaatgcctccgagggtggtgaaga 155497

                                                                          
Query: 296    tgcatcgggaagtgaatctggtgatggcgagcagtgttctcgtgaagatcatgacgagga 355
              |||||| |||||||||||||||||||| ||| |||| ||||||||||||||||| |||||
Sbjct: 155496 tgcatcaggaagtgaatctggtgatggtgaggagtgctctcgtgaagatcatgatgagga 155437

                                                                          
Query: 356    a---gaagatatggatc---atgatcaggatgcgaaggcagaaagtgagggtgaggcaga 409
              |   |||||||||||||   ||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 155436 agaggaagatatggatcatgatgatcaggatgccaaggctgaaagtgagggtgaggcaga 155377

                                                     
Query: 410    ggggacaactgagaaccatgacgttgaaggaggaatatc 448
               || ||||||||||  ||||| || ||||| ||||||||
Sbjct: 155376 aggaacaactgagacacatgatgtggaagggggaatatc 155338



 Score =  119 bits (60), Expect = 1e-23
 Identities = 105/120 (87%)
 Strand = Plus / Minus

                                                                          
Query: 14     agggcgcctatttaatgaacctgctgcgtcccataatacttcgaaagttgaaagagaaga 73
              |||||||||||| |||||| || |||| ||||| |||||  | |||||||||||||||||
Sbjct: 155805 agggcgcctattcaatgaagcttctgcatcccacaataccccaaaagttgaaagagaaga 155746

                                                                          
Query: 74     aggtgaactatcgccgaatggagattttgaagaggacaactttgtgccttttgaagatgg 133
               |||||| |||| || ||||| ||||||||||||||||| |||| |||||||||||||||
Sbjct: 155745 gggtgaattatctcctaatggggattttgaagaggacaattttgcgccttttgaagatgg 155686



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 107/130 (82%), Gaps = 2/130 (1%)
 Strand = Plus / Minus

                                                                          
Query: 477    gaacgctttctgtactcggctaaaccgctggccaagcatgtaccctcatctttacatggt 536
              |||||||||||  |||| |  ||||| || ||||||||||||||| || |||||||||  
Sbjct: 155324 gaacgctttctacactccgtaaaaccacttgccaagcatgtacccacagctttacatgac 155265

                                                                          
Query: 537    cggga-gaacagatcatcacatatattttatgggaacgattcattttatatcttgttcag 595
              || || ||| || || || | ||||||||||||||| |||||||||||| |  |||||||
Sbjct: 155264 cgagatgaaaag-tcctcgcgtatattttatgggaatgattcattttatgtactgttcag 155206

                        
Query: 596    gttgcatcag 605
              | ||||||||
Sbjct: 155205 gctgcatcag 155196
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>dbj|AK121497.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033007H10, full
            insert sequence
          Length = 4570

 Score =  220 bits (111), Expect = 4e-54
 Identities = 193/219 (88%), Gaps = 6/219 (2%)
 Strand = Plus / Plus

                                                                        
Query: 236  tgaggaaagcactcaaaggtctaccgaggacagtgaaaatgcttctgaggctggtgaaga 295
            |||||||||| | ||||||||||||||||||||||| ||||| || |||| |||||||||
Sbjct: 2799 tgaggaaagcgcacaaaggtctaccgaggacagtgagaatgcctccgagggtggtgaaga 2858

                                                                        
Query: 296  tgcatcgggaagtgaatctggtgatggcgagcagtgttctcgtgaagatcatgacgagga 355
            |||||| |||||||||||||||||||| ||| |||| ||||||||||||||||| |||||
Sbjct: 2859 tgcatcaggaagtgaatctggtgatggtgaggagtgctctcgtgaagatcatgatgagga 2918

                                                                        
Query: 356  a---gaagatatggatc---atgatcaggatgcgaaggcagaaagtgagggtgaggcaga 409
            |   |||||||||||||   ||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 2919 agaggaagatatggatcatgatgatcaggatgccaaggctgaaagtgagggtgaggcaga 2978

                                                   
Query: 410  ggggacaactgagaaccatgacgttgaaggaggaatatc 448
             || ||||||||||  ||||| || ||||| ||||||||
Sbjct: 2979 aggaacaactgagacacatgatgtggaagggggaatatc 3017



 Score =  119 bits (60), Expect = 1e-23
 Identities = 105/120 (87%)
 Strand = Plus / Plus

                                                                        
Query: 14   agggcgcctatttaatgaacctgctgcgtcccataatacttcgaaagttgaaagagaaga 73
            |||||||||||| |||||| || |||| ||||| |||||  | |||||||||||||||||
Sbjct: 2550 agggcgcctattcaatgaagcttctgcatcccacaataccccaaaagttgaaagagaaga 2609

                                                                        
Query: 74   aggtgaactatcgccgaatggagattttgaagaggacaactttgtgccttttgaagatgg 133
             |||||| |||| || ||||| ||||||||||||||||| |||| |||||||||||||||
Sbjct: 2610 gggtgaattatctcctaatggggattttgaagaggacaattttgcgccttttgaagatgg 2669



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 119/145 (82%), Gaps = 2/145 (1%)
 Strand = Plus / Plus

                                                                        
Query: 477  gaacgctttctgtactcggctaaaccgctggccaagcatgtaccctcatctttacatggt 536
            |||||||||||  |||| |  ||||| || ||||||||||||||| || |||||||||  
Sbjct: 3031 gaacgctttctacactccgtaaaaccacttgccaagcatgtacccacagctttacatgac 3090

                                                                        
Query: 537  cggga-gaacagatcatcacatatattttatgggaacgattcattttatatcttgttcag 595
            || || ||| || || || | ||||||||||||||| |||||||||||| |  |||||||
Sbjct: 3091 cgagatgaaaag-tcctcgcgtatattttatgggaatgattcattttatgtactgttcag 3149

                                     
Query: 596  gttgcatcagatgctgtatgaaaga 620
            | ||||||||||  |||| ||||||
Sbjct: 3150 gctgcatcagatcttgtacgaaaga 3174
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>ref|XM_493857.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3171

 Score =  145 bits (73), Expect = 2e-31
 Identities = 132/151 (87%), Gaps = 3/151 (1%)
 Strand = Plus / Plus

                                                                        
Query: 261  gaggacagtgaaaatgcttctgaggctggtgaagatgcatcgggaagtgaatctggtgat 320
            ||||||||||||||||| ||||| |||||||||||||| || || |||||||||||||||
Sbjct: 2209 gaggacagtgaaaatgcatctgaagctggtgaagatgcctctggtagtgaatctggtgat 2268

                                                                        
Query: 321  ggcgagcagtgttctcgtgaagatcatgacgaggaagaagatatggatc---atgatcag 377
            || ||  |||||||||| ||||||||||| || ||||| ||||||||||   ||||||  
Sbjct: 2269 ggtgaagagtgttctcgagaagatcatgaggatgaagatgatatggatcaggatgatcct 2328

                                           
Query: 378  gatgcgaaggcagaaagtgagggtgaggcag 408
            ||||| ||||| |||||||||||||||||||
Sbjct: 2329 gatgcaaaggctgaaagtgagggtgaggcag 2359



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                        
Query: 557  tatattttatgggaacgattcattttatatcttgttcaggttgcatcagatgctgtatga 616
            |||||||||||| || || || |||||| | ||||||||| | || ||||| || |||||
Sbjct: 2493 tatattttatggaaatgactcgttttatgttttgttcaggctacaccagatcctatatga 2552

                
Query: 617  aaga 620
            ||||
Sbjct: 2553 aaga 2556
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
             complete sequence
          Length = 29737217

 Score =  145 bits (73), Expect = 2e-31
 Identities = 132/151 (87%), Gaps = 3/151 (1%)
 Strand = Plus / Minus

                                                                         
Query: 261   gaggacagtgaaaatgcttctgaggctggtgaagatgcatcgggaagtgaatctggtgat 320
             ||||||||||||||||| ||||| |||||||||||||| || || |||||||||||||||
Sbjct: 10348 gaggacagtgaaaatgcatctgaagctggtgaagatgcctctggtagtgaatctggtgat 10289

                                                                         
Query: 321   ggcgagcagtgttctcgtgaagatcatgacgaggaagaagatatggatc---atgatcag 377
             || ||  |||||||||| ||||||||||| || ||||| ||||||||||   ||||||  
Sbjct: 10288 ggtgaagagtgttctcgagaagatcatgaggatgaagatgatatggatcaggatgatcct 10229

                                            
Query: 378   gatgcgaaggcagaaagtgagggtgaggcag 408
             ||||| ||||| |||||||||||||||||||
Sbjct: 10228 gatgcaaaggctgaaagtgagggtgaggcag 10198
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>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10,
             complete sequence
          Length = 156772

 Score =  145 bits (73), Expect = 2e-31
 Identities = 132/151 (87%), Gaps = 3/151 (1%)
 Strand = Plus / Minus

                                                                         
Query: 261   gaggacagtgaaaatgcttctgaggctggtgaagatgcatcgggaagtgaatctggtgat 320
             ||||||||||||||||| ||||| |||||||||||||| || || |||||||||||||||
Sbjct: 10348 gaggacagtgaaaatgcatctgaagctggtgaagatgcctctggtagtgaatctggtgat 10289

                                                                         
Query: 321   ggcgagcagtgttctcgtgaagatcatgacgaggaagaagatatggatc---atgatcag 377
             || ||  |||||||||| ||||||||||| || ||||| ||||||||||   ||||||  
Sbjct: 10288 ggtgaagagtgttctcgagaagatcatgaggatgaagatgatatggatcaggatgatcct 10229

                                            
Query: 378   gatgcgaaggcagaaagtgagggtgaggcag 408
             ||||| ||||| |||||||||||||||||||
Sbjct: 10228 gatgcaaaggctgaaagtgagggtgaggcag 10198
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>gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0098I11, complete sequence
          Length = 122970

 Score =  145 bits (73), Expect = 2e-31
 Identities = 132/151 (87%), Gaps = 3/151 (1%)
 Strand = Plus / Minus

                                                                         
Query: 261   gaggacagtgaaaatgcttctgaggctggtgaagatgcatcgggaagtgaatctggtgat 320
             ||||||||||||||||| ||||| |||||||||||||| || || |||||||||||||||
Sbjct: 19577 gaggacagtgaaaatgcatctgaagctggtgaagatgcctctggtagtgaatctggtgat 19518

                                                                         
Query: 321   ggcgagcagtgttctcgtgaagatcatgacgaggaagaagatatggatc---atgatcag 377
             || ||  |||||||||| ||||||||||| || ||||| ||||||||||   ||||||  
Sbjct: 19517 ggtgaagagtgttctcgagaagatcatgaggatgaagatgatatggatcaggatgatcct 19458

                                            
Query: 378   gatgcgaaggcagaaagtgagggtgaggcag 408
             ||||| ||||| |||||||||||||||||||
Sbjct: 19457 gatgcaaaggctgaaagtgagggtgaggcag 19427
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>ref|NM_102265.2| Arabidopsis thaliana unknown protein AT1G24190 mRNA, complete cds
          Length = 4362

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                           
Query: 57   aaagttgaaagagaagaaggtgaactatcgccgaatggagattttga 103
            |||||||||||||||||||||||||| || || |||||||| |||||
Sbjct: 2734 aaagttgaaagagaagaaggtgaactttctccaaatggagactttga 2780
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>gb|AC002396.1| Arabidopsis thaliana chromosome I BAC F3I6 genomic sequence, complete
             sequence
          Length = 122358

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                            
Query: 57    aaagttgaaagagaagaaggtgaactatcgccgaatggagattttga 103
             |||||||||||||||||||||||||| || || |||||||| |||||
Sbjct: 45064 aaagttgaaagagaagaaggtgaactttctccaaatggagactttga 45018
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>gb|AC182706.2| Populus trichocarpa clone Pop1-79P19, complete sequence
          Length = 102226

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 61    ttgaaagagaagaaggtgaactatcgccgaatggagattttgaagagga 109
             ||||||||||||| |||||| |||| || |||||||||||||| |||||
Sbjct: 50824 ttgaaagagaagagggtgaattatctccaaatggagattttgaggagga 50872
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>gb|AC146588.14| Medicago truncatula clone mth2-145c3, complete sequence
          Length = 116965

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 62    tgaaagagaagaaggtgaactatcgccgaatggagattttgaagaggacaactttg 117
             |||||||||||| |||||| | || || |||||||| ||||||||||| |||||||
Sbjct: 43663 tgaaagagaagagggtgaattgtctcctaatggagactttgaagaggataactttg 43608
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>dbj|AP004928.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01G01, TM0081b,
             complete sequence
          Length = 44292

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 261   gaggacagtgaaaatgcttctgaggctggtgaagatg 297
             |||||||||||||||| |||||| ||||| |||||||
Sbjct: 21796 gaggacagtgaaaatgtttctgaagctggggaagatg 21760
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>gb|AC137832.40| Medicago truncatula clone mth2-22i17, complete sequence
          Length = 127688

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                 
Query: 264   gacagtgaaaatgcttctgaggctggtgaagatgcatcgggaagtgaatctg 315
             ||||| ||||||| |||||| |||||||||||||  || |||||||| ||||
Sbjct: 90839 gacagcgaaaatgtttctgaagctggtgaagatgtgtcaggaagtgagtctg 90890
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>emb|CT571260.1| Medicago truncatula chromosome 5 clone mth2-35p14, COMPLETE SEQUENCE
          Length = 120436

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                             
Query: 63     gaaagagaagaaggtgaactatcgccgaatggagattttgaagagga 109
              ||||||||||| |||||  |||| || |||||||| |||||||||||
Sbjct: 105888 gaaagagaagagggtgagttatctccaaatggagactttgaagagga 105934
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>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 559     tattttatgggaacgattcatt 580
               ||||||||||||||||||||||
Sbjct: 4149243 tattttatgggaacgattcatt 4149264
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>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 559     tattttatgggaacgattcatt 580
               ||||||||||||||||||||||
Sbjct: 4091548 tattttatgggaacgattcatt 4091569
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>gb|CP000040.1| Bacillus cereus E33L plasmid pE33L466, complete sequence
          Length = 466370

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 60     gttgaaagagaagaaggtgaa 80
              |||||||||||||||||||||
Sbjct: 364290 gttgaaagagaagaaggtgaa 364310
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>dbj|AP001302.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K24A2
          Length = 30648

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 353  ggaagaagatatggatcatga 373
            |||||||||||||||||||||
Sbjct: 4962 ggaagaagatatggatcatga 4982
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>emb|AL928973.3| Mouse DNA sequence from clone RP23-259J7 on chromosome 2, complete
              sequence
          Length = 157458

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 509    caagcatgtaccctcatctttacat 533
              |||||||| ||||||||||||||||
Sbjct: 116875 caagcatgcaccctcatctttacat 116851
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>ref|NM_103009.3| Arabidopsis thaliana HAF01; DNA binding AT1G32750 (HAF01) mRNA,
           complete cds
          Length = 5898

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 338 tgaagatcatgacgaggaagaaga 361
           ||||||| ||||||||||||||||
Sbjct: 432 tgaagattatgacgaggaagaaga 455
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>gb|AC134908.5| Mus musculus BAC clone RP23-377L13 from chromosome 17, complete
             sequence
          Length = 189458

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 565   atgggaacgattcattttat 584
             ||||||||||||||||||||
Sbjct: 61453 atgggaacgattcattttat 61472
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>gb|AF510669.1| Arabidopsis thaliana HAF1 mRNA, complete cds
          Length = 5811

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 338 tgaagatcatgacgaggaagaaga 361
           ||||||| ||||||||||||||||
Sbjct: 432 tgaagattatgacgaggaagaaga 455
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>gb|AC132429.2| Mus musculus BAC clone RP23-203O20 from chromosome 1, complete sequence
          Length = 199083

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    aaagttgaaagagaagaagg 76
             ||||||||||||||||||||
Sbjct: 23949 aaagttgaaagagaagaagg 23968
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>ref|XM_660228.1| Cryptosporidium hominis TU502 OSK4 (Chro.60086) partial mRNA
          Length = 2208

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 338  tgaagatcatgacgaggaagaaga 361
            ||||||| ||||||||||||||||
Sbjct: 1668 tgaagatgatgacgaggaagaaga 1645
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>ref|XM_780233.1| PREDICTED: Strongylocentrotus purpuratus similar to nuclear cap
            binding protein subunit 1, 80kDa (predicted) (LOC580160),
            mRNA
          Length = 3802

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 604  agatgctgtatgaaagactg 623
            ||||||||||||||||||||
Sbjct: 1214 agatgctgtatgaaagactg 1233
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>emb|BX538353.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 4/4
          Length = 277703

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     ttgaaagagaagaaggtgaa 80
              ||||||||||||||||||||
Sbjct: 210971 ttgaaagagaagaaggtgaa 210952
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>emb|AL929359.1|PFA929359 Plasmodium falciparum strain 3D7, chromosome 9; segment 5/5
          Length = 281723

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 356    agaagatatggatcatgatc 375
              ||||||||||||||||||||
Sbjct: 212819 agaagatatggatcatgatc 212838
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>emb|BX284633.6| Mouse DNA sequence from clone RP23-15F8 on chromosome 11, complete
             sequence
          Length = 44217

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 575   ttcattttatatcttgttca 594
             ||||||||||||||||||||
Sbjct: 30227 ttcattttatatcttgttca 30208
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>gb|AC097658.2| Homo sapiens BAC clone RP11-364L4 from 4, complete sequence
          Length = 165247

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    tgctgaggcagctggcgaga 222
              ||||||||||||||||||||
Sbjct: 109509 tgctgaggcagctggcgaga 109528
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>ref|XM_627844.1| Cryptosporidium parvum Iowa II transcription elongation factor
            (cgd6_5250), partial mRNA
          Length = 6699

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 61   ttgaaagagaagaaggtgaa 80
            ||||||||||||||||||||
Sbjct: 1349 ttgaaagagaagaaggtgaa 1368
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>gb|DQ021880.1| Homo sapiens GRB2-associated binding protein 1 (GAB1) gene,
           complete cds
          Length = 135764

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 203 tgctgaggcagctggcgaga 222
           ||||||||||||||||||||
Sbjct: 563 tgctgaggcagctggcgaga 582
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>gb|AC013731.10| Homo sapiens BAC clone RP11-546J1 from 2, complete sequence
          Length = 151851

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 474   tcagaacgctttctgtactc 493
             ||||||||||||||||||||
Sbjct: 77275 tcagaacgctttctgtactc 77256
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>gb|AC017118.3|AC017118 Genomic sequence for Arabidopsis thaliana BAC F6N18 from chromosome I,
             complete sequence
          Length = 92219

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 338   tgaagatcatgacgaggaagaaga 361
             ||||||| ||||||||||||||||
Sbjct: 64558 tgaagattatgacgaggaagaaga 64535
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>gb|AC140918.1| Caenorhabditis briggsae cosmid CB020L07, complete sequence
          Length = 104788

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 48   aatacttcgaaagttgaaag 67
            ||||||||||||||||||||
Sbjct: 1100 aatacttcgaaagttgaaag 1081
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>dbj|AK074381.1| Homo sapiens cDNA FLJ23801 fis, clone HEP22544
          Length = 2581

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 tgctgaggcagctggcgaga 222
           ||||||||||||||||||||
Sbjct: 918 tgctgaggcagctggcgaga 899
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>dbj|AP006631.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT12F12, TM0028b,
             complete sequence
          Length = 34228

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   gacagtgaaaatgcttctga 283
             ||||||||||||||||||||
Sbjct: 26219 gacagtgaaaatgcttctga 26200
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>emb|AL691500.7| Mouse DNA sequence from clone RP23-182H15 on chromosome X, complete
             sequence
          Length = 196828

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    aaagagaagaaggtgaacta 83
             ||||||||||||||||||||
Sbjct: 47150 aaagagaagaaggtgaacta 47169


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,167,419
Number of Sequences: 3902068
Number of extensions: 6167419
Number of successful extensions: 115376
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115148
Number of HSP's gapped (non-prelim): 216
length of query: 635
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 612
effective length of database: 17,143,297,704
effective search space: 10491698194848
effective search space used: 10491698194848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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