ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags36f22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YPC1_CAEEL (Q11178) Hypothetical protein C05D10.1 33 0.65
2CECR2_HUMAN (Q9BXF3) Cat eye syndrome critical region protein 2 32 1.4
3CNOT3_HUMAN (O75175) CCR4-NOT transcription complex subunit 3 (C... 32 1.9
4DCP1B_PONPY (Q5R413) mRNA decapping enzyme 1B (EC 3.-.-.-) 32 1.9
5SC24A_ARATH (Q9SFU0) Protein transport protein Sec24-like At3g07100 31 2.5
6NFAC1_HUMAN (O95644) Nuclear factor of activated T-cells, cytopl... 31 2.5
7PCX3_MOUSE (Q8VI59) Pecanex-like protein 3 31 2.5
8HEM3_AERPE (Q9Y9J0) Probable porphobilinogen deaminase (EC 2.5.1... 31 3.2
9CD19_MOUSE (P25918) B-lymphocyte antigen CD19 precursor (B-lymph... 31 3.2
10RCOR2_RAT (Q5FWT8) REST corepressor 2 31 3.2
11POLS_RUBVM (P08563) Structural polyprotein [Contains: Nucleocaps... 27 4.0
12SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1 27 4.1
13AB1IP_HUMAN (Q7Z5R6) Amyloid beta A4 precursor protein-binding f... 26 4.2
14NKX61_MOUSE (Q99MA9) Homeobox protein Nkx-6.1 27 4.4
15WASF3_HUMAN (Q9UPY6) Wiskott-Aldrich syndrome protein family mem... 30 5.5
16ACHA2_MOUSE (Q91X60) Neuronal acetylcholine receptor protein, al... 30 5.5
17EVL_MOUSE (P70429) Ena/VASP-like protein (Ena/vasodilator stimul... 30 5.5
18RCOR2_MOUSE (Q8C796) REST corepressor 2 (M-CoREST) 30 5.5
19NKX61_RAT (O35762) Homeobox protein Nkx-6.1 27 5.7
20TFE3_HUMAN (P19532) Transcription factor E3 30 7.2
21RCOR3_HUMAN (Q9P2K3) REST corepressor 3 30 7.2
22RX_DROME (Q9W2Q1) Retinal homeobox protein Rx (DRx1) (DRx) 30 7.2
23G3B2_MOUSE (P97379) Ras-GTPase-activating protein-binding protei... 30 7.2
24KLDC4_HUMAN (Q8TBB5) Kelch domain-containing protein 4 30 7.2
25HIRP3_HUMAN (Q9BW71) HIRA-interacting protein 3 29 9.4
26HUTU_VIBPA (Q87Q76) Urocanate hydratase (EC 4.2.1.49) (Urocanase... 29 9.4
27GFC1_HUMAN (P63117) HERV-F(c)1_Xq21.33 provirus ancestral Gag po... 29 9.4
28RCOR3_MOUSE (Q6PGA0) REST corepressor 3 29 9.4
29SEM5B_MOUSE (Q60519) Semaphorin-5B precursor (Semaphorin G) (Sem... 29 9.4
30MYPC3_HUMAN (Q14896) Myosin-binding protein C, cardiac-type (Car... 29 9.4

>YPC1_CAEEL (Q11178) Hypothetical protein C05D10.1|
          Length = 529

 Score = 33.1 bits (74), Expect = 0.65
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
 Frame = +1

Query: 40  GRPPPAALRFKQESRTNPILP--PIDTIPPRIGSSAHLAANQDPHPP 174
           G PPP A  ++++  +NP++P  P+ +IP  I +S  ++AN     P
Sbjct: 196 GFPPPVASYYQRKESSNPLVPPTPLSSIPNLITNSNAVSANTSTASP 242



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>CECR2_HUMAN (Q9BXF3) Cat eye syndrome critical region protein 2|
          Length = 1484

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +1

Query: 4    APRXAAANPTYAGRPPPAALRFKQESRTNPILPPIDTIPPRIGSSAHLAANQDPHP 171
            AP+ A  NP   GR P  +   + E+     LP ++  PP +G+S  +   Q PHP
Sbjct: 949  APKPALGNP---GRAPENSEAQEPENDQAEPLPGLEEKPPGVGTSEGVYLTQLPHP 1001



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>CNOT3_HUMAN (O75175) CCR4-NOT transcription complex subunit 3 (CCR4-associated|
           factor 3)
          Length = 753

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 29/110 (26%), Positives = 41/110 (37%), Gaps = 9/110 (8%)
 Frame = +1

Query: 7   PRXAAANPTYAGRPPPAALRFKQESRTN----PILPPIDTIPPRIGSSAHLAANQDPH-- 168
           P+  A  PTY   PPPAA         N    P  PP    P    + +H +    P+  
Sbjct: 314 PQSPAVPPTYPSGPPPAASALSTTPGNNGVPAPAAPPSALGPKASPAPSHNSGTPAPYAQ 373

Query: 169 ---PPSRLGFATIGKQLRKVMGTVGAWRRAHDEAVVDLDESPNAAAGGGS 309
              PP+  G +T   +   V  + G               S N++AGGG+
Sbjct: 374 AVAPPAPSGPSTTQPRPPSVQPSGGG---GGGSGGGGSSSSSNSSAGGGA 420



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>DCP1B_PONPY (Q5R413) mRNA decapping enzyme 1B (EC 3.-.-.-)|
          Length = 609

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 10/112 (8%)
 Frame = +2

Query: 296 PAEAASTGLRPPRAHG------PR---PLTSKR*ATRGVREPR*SVVWLLWIWRRMLIRN 448
           P +A   G  PP+AHG      PR   P++  +  + GV  P           + +L + 
Sbjct: 400 PPQAYFNGSLPPQAHGREQSTLPRQTLPISGNQTGSSGVISP-----------QELLKKL 448

Query: 449 VLVMPEQQLAISSVGTNAGRFHLLYAFLRTGKK-DSAISETAPCESVHQVPM 601
            +V  EQQL  S+    A +F +L     TGK  +S I++T+  E   Q P+
Sbjct: 449 QIVQQEQQLHASNRPALAAKFPVLSQSSGTGKPLESWINKTSSTE--QQTPL 498



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>SC24A_ARATH (Q9SFU0) Protein transport protein Sec24-like At3g07100|
          Length = 1038

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
 Frame = +1

Query: 7   PRXAAANPTYAGRPPPAALRFK---QESRTNPILPPIDTIPPRIGSSA---HLAANQDPH 168
           P    + P++ G P    L+     Q S+  P  PP+ + PP  G  A   ++AA Q+ H
Sbjct: 198 PGVGGSQPSFPGYPSKQVLQAPTPFQTSQGPPGPPPVSSYPPHTGGFAQRPNMAAQQNLH 257

Query: 169 P 171
           P
Sbjct: 258 P 258



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>NFAC1_HUMAN (O95644) Nuclear factor of activated T-cells, cytoplasmic 1 (NFAT|
            transcription complex cytosolic component) (NF-ATc1)
            (NF-ATc)
          Length = 943

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 27/95 (28%), Positives = 38/95 (40%)
 Frame = +1

Query: 7    PRXAAANPTYAGRPPPAALRFKQESRTNPILPPIDTIPPRIGSSAHLAANQDPHPPSRLG 186
            PR  A +P   G+PPPA L  +  +      PP  + PP +  S   ++   P PP+   
Sbjct: 804  PRPVATHPGSPGQPPPALLPQQVSA------PPSSSCPPGLEHSLCPSSPSPPLPPATQE 857

Query: 187  FATIGKQLRKVMGTVGAWRRAHDEAVVDLDESPNA 291
               +           G  R  H  + V  DESP A
Sbjct: 858  PTCLQPCSPACPPATG--RPQHLPSTVRRDESPTA 890



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>PCX3_MOUSE (Q8VI59) Pecanex-like protein 3|
          Length = 1620

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
 Frame = +2

Query: 227  RLALGGEHTMKP----SWTWMNLPTPPPAEAAST-GLRPPRAHGPRPLTSK 364
            R +L G    +P     W    LP PPPA  A T G RP R  GP  L S+
Sbjct: 1472 RPSLSGSGDGRPPPLLQWPPPRLPGPPPASPAPTEGPRPSRPSGPALLNSE 1522



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>HEM3_AERPE (Q9Y9J0) Probable porphobilinogen deaminase (EC 2.5.1.61) (PBG)|
           (Hydroxymethylbilane synthase) (HMBS)
           (Pre-uroporphyrinogen synthase)
          Length = 305

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 26/76 (34%), Positives = 36/76 (47%)
 Frame = -2

Query: 319 ARAGCLXXXXRWEIHPSPRRLHRVLASKRQPYPSPFEAAYQSLQTLIG*ADVDLGLQRGE 140
           ARAGC      +   P  R + RV A+   P  S   A +   +  I  A   +G+  GE
Sbjct: 234 ARAGCRTPVAAYA-EPLGRSMVRVTAAALSPDGS--RAYWARAEGRIEEAR-RIGVSLGE 289

Query: 139 QMSRCVEGWYLWAEGS 92
           ++SR VEGW+    GS
Sbjct: 290 ELSRVVEGWHKTGGGS 305



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>CD19_MOUSE (P25918) B-lymphocyte antigen CD19 precursor (B-lymphocyte surface|
           antigen B4) (Leu-12) (Differentiation antigen CD19)
          Length = 547

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 230 LALGGEHTMKPSWTWMNLPTPPPAEAASTG 319
           L+LGGEH ++  W W +L   P A A   G
Sbjct: 226 LSLGGEHPVREMWVWGSLLLLPQATALDEG 255



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>RCOR2_RAT (Q5FWT8) REST corepressor 2|
          Length = 523

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 21/61 (34%), Positives = 27/61 (44%)
 Frame = +1

Query: 28  PTYAGRPPPAALRFKQESRTNPILPPIDTIPPRIGSSAHLAANQDPHPPSRLGFATIGKQ 207
           PT   +PPP       + R  P  PP   I P + +S H +A   P PP  L    +G Q
Sbjct: 461 PTLLRQPPPLQQGRFLQPRLAPNQPPPPLIRPALAASRH-SARPGPQPPPTL----VGAQ 515

Query: 208 L 210
           L
Sbjct: 516 L 516



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>POLS_RUBVM (P08563) Structural polyprotein [Contains: Nucleocapsid protein C;|
           Membrane glycoprotein E2; Membrane glycoprotein E1]
          Length = 992

 Score = 26.6 bits (57), Expect(2) = 4.0
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = +1

Query: 19  AANPTYAGRP-PPAALRFKQESRTNPILPPIDTIPPRIGSSAHLAANQDPHPP 174
           AA  + + RP PP   R +      P + P    PPR G+      ++ P PP
Sbjct: 28  AAGASQSRRPRPPRHARLQHLPEMTPAVTPEGPAPPRTGAWQRKDWSRAPPPP 80



 Score = 22.3 bits (46), Expect(2) = 4.0
 Identities = 14/46 (30%), Positives = 17/46 (36%)
 Frame = +2

Query: 257 KPSWTWMNLPTPPPAEAASTGLRPPRAHGPRPLTSKR*ATRGVREP 394
           KPS      P PP  +    G  P    GP     +    RG+R P
Sbjct: 94  KPSRAPPQQPQPPRMQTGRGGSAPRPELGPPTNPFQAAVARGLRPP 139



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>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 26.9 bits (58), Expect(2) = 4.1
 Identities = 20/59 (33%), Positives = 25/59 (42%)
 Frame = +1

Query: 4   APRXAAANPTYAGRPPPAALRFKQESRTNPILPPIDTIPPRIGSSAHLAANQDPHPPSR 180
           +PR    +P+    PPPA        R +P  PP    PPR   S  L   + P PP R
Sbjct: 536 SPRRRRRSPS----PPPA------RRRRSPSPPP----PPRRRRSPSLPRRRSPSPPPR 580



 Score = 21.9 bits (45), Expect(2) = 4.1
 Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = +2

Query: 284 PTPPPAEAASTGLRPP-RAHGPRPLTSKR 367
           P+PPP    ++   PP R   P P + +R
Sbjct: 599 PSPPPKRRTASPPPPPKRRASPSPQSKRR 627



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>AB1IP_HUMAN (Q7Z5R6) Amyloid beta A4 precursor protein-binding family B member|
           1-interacting protein (APBB1-interacting protein 1)
           (Rap1-GTP-interacting adapter molecule) (RIAM)
           (Proline-rich EVH1 ligand 1) (PREL-1) (Proline-rich
           protein 73) (Retinoic ac
          Length = 666

 Score = 25.8 bits (55), Expect(2) = 4.2
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +1

Query: 46  PPPAALRFKQESRTNP--ILPPIDTIPPRIGSSAHLAANQDPHPP 174
           PPP  L   +     P  + PP D +PP   S A +A ++ P PP
Sbjct: 558 PPPPPLDDPELPPPPPDFMEPPPDFVPPPPPSYAGIAGSELPPPP 602



 Score = 23.1 bits (48), Expect(2) = 4.2
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +2

Query: 281 LPTPPPAEAASTGLRPPRAHGPRPLTSKR 367
           LP PPP   A      P +  P P  +KR
Sbjct: 598 LPPPPPPPPAPAPAPVPDSARPPPAVAKR 626



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>NKX61_MOUSE (Q99MA9) Homeobox protein Nkx-6.1|
          Length = 365

 Score = 26.6 bits (57), Expect(2) = 4.4
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +1

Query: 46  PPPAALRFKQESRTN---PILPPIDTIPPRIGSSAHLAANQDPHPP 174
           PP AAL    E +T       PP+ T PP   SS+  +++  P PP
Sbjct: 20  PPLAALHSMAEMKTPLYPAAYPPLPTGPP--SSSSSSSSSSSPSPP 63



 Score = 22.3 bits (46), Expect(2) = 4.4
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 284 PTPPPAEAASTGLRPPRAHGPRPLTS 361
           P+PP       GL+PP A G   L S
Sbjct: 60  PSPPLGSHNPGGLKPPAAGGLSSLGS 85



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>WASF3_HUMAN (Q9UPY6) Wiskott-Aldrich syndrome protein family member 3|
           (WASP-family protein member 3) (WAVE-3 protein)
           (Verprolin homology domain-containing protein 3)
          Length = 502

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +1

Query: 46  PPPAALRFKQESRTNPILPPIDTIPPRIGSSAHLAANQDPHPPS 177
           PPP  +   Q +  +P+  P+    P   SS H A    PHPPS
Sbjct: 347 PPPPVIPSAQTAFVSPLQMPMQPPFPASASSTHAA---PPHPPS 387



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>ACHA2_MOUSE (Q91X60) Neuronal acetylcholine receptor protein, alpha-2 subunit|
           precursor
          Length = 512

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +2

Query: 221 WVRLALGGEHTMKPSWTWMNLPTPPPAEAASTGLR 325
           WVR+AL G     P W  MN P PP     S GL+
Sbjct: 342 WVRVALLGR---VPRWLMMNRPLPPMELHGSPGLK 373



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>EVL_MOUSE (P70429) Ena/VASP-like protein (Ena/vasodilator stimulated|
           phosphoprotein-like)
          Length = 414

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 26/102 (25%), Positives = 35/102 (34%)
 Frame = +1

Query: 1   GAPRXAAANPTYAGRPPPAALRFKQESRTNPILPPIDTIPPRIGSSAHLAANQDPHPPSR 180
           G P  AA+       PPP          T    PP    PP + +      N D    S 
Sbjct: 165 GHPSSAASTTLSCSGPPPPPPPPVPPPPTGSTPPP----PPPLPAGGAQGTNHDESSASG 220

Query: 181 LGFATIGKQLRKVMGTVGAWRRAHDEAVVDLDESPNAAAGGG 306
           L  A  G +LR+V     A   +        D +  ++ GGG
Sbjct: 221 LAAALAGAKLRRVQRPEDASGGSSPSGTSKSDANRASSGGGG 262



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>RCOR2_MOUSE (Q8C796) REST corepressor 2 (M-CoREST)|
          Length = 523

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +1

Query: 28  PTYAGRPPPAALRFKQESRTNPILPPIDTIPPRIGSSAHLAANQDPHPPSRL 183
           PT   +PPP       + R  P  PP   I P + +S H +A   P PP  L
Sbjct: 461 PTLLRQPPPLQQGRFLQPRLAPNQPPPPLIRPALAASRH-SARPGPQPPPTL 511



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>NKX61_RAT (O35762) Homeobox protein Nkx-6.1|
          Length = 365

 Score = 26.6 bits (57), Expect(2) = 5.7
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +1

Query: 46  PPPAALRFKQESRTN---PILPPIDTIPPRIGSSAHLAANQDPHPP 174
           PP AAL    E +T       PP+ T PP   SS+  +++  P PP
Sbjct: 20  PPLAALHSMAEMKTPLYPAAYPPLPTGPP--SSSSSSSSSSSPSPP 63



 Score = 21.9 bits (45), Expect(2) = 5.7
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 284 PTPPPAEAASTGLRPPRAHGPRPLTS 361
           P+PP       GL+PP A G   L S
Sbjct: 60  PSPPLGAHNPGGLKPPAAGGLSSLGS 85



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>TFE3_HUMAN (P19532) Transcription factor E3|
          Length = 743

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
 Frame = +1

Query: 4   APRXAAANPTYAG------RPPPAALRFKQESRTNPILPPIDTIPPRIGSSAHLAANQDP 165
           +P  AA++P  +       RP  AA     +   +   P   T PPR G    +     P
Sbjct: 542 SPLRAASDPLLSSVSLLSPRPAAAAAASAWKRSPDQASPLPWTFPPRKGGPVRMRPRLFP 601

Query: 166 HPPSRL 183
           HPP RL
Sbjct: 602 HPPMRL 607



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>RCOR3_HUMAN (Q9P2K3) REST corepressor 3|
          Length = 495

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
 Frame = +1

Query: 22  ANPTYAGRPPPAA--LRFKQESRT-----NPILPPIDTIPPRIGSSAHLAANQDPHPPSR 180
           A P    +PPP     RF Q   T      P++ P +++PPR+     L+      PPS 
Sbjct: 424 AAPALHRQPPPLQQQARFIQPRPTLNQPPPPLIRPANSMPPRLNPRPVLSTVGGQQPPSL 483

Query: 181 LGFAT 195
           +G  T
Sbjct: 484 IGIQT 488



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>RX_DROME (Q9W2Q1) Retinal homeobox protein Rx (DRx1) (DRx)|
          Length = 873

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = +1

Query: 10  RXAAANPTYAGRPPPAALRFKQESRTNPILPPIDTIPPRIGSSA 141
           + A ++PT AG PPP    F  ES+T P+ P       R  SSA
Sbjct: 318 KYAKSSPTGAGPPPPPGAYF-MESQTAPVAPSQINYDERSMSSA 360



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>G3B2_MOUSE (P97379) Ras-GTPase-activating protein-binding protein 2 (GAP|
           SH3-domain-binding protein 2) (G3BP-2)
          Length = 482

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +2

Query: 287 TPPPAEAASTGLRPPRAHGPRPLTSK 364
           TPPPAE AS    PP+A     +TSK
Sbjct: 227 TPPPAEPASLPQEPPKAFSWASVTSK 252



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>KLDC4_HUMAN (Q8TBB5) Kelch domain-containing protein 4|
          Length = 520

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +2

Query: 248 HTMKPSWTWMNLPTPPPAEAASTGLRPPRAHG 343
           +T K +WT +++P+PPP   A   +  P+  G
Sbjct: 101 NTRKDTWTKVDIPSPPPRRCAHQAVVVPQGGG 132



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>HIRP3_HUMAN (Q9BW71) HIRA-interacting protein 3|
          Length = 556

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = +1

Query: 376 EGSSRAKIKRRVAVVDLEADADQECSGDARTTISHLIGGNKRRKVPPVICLSPDREE-RF 552
           E   +  +KR V    L+   D+  S + +  ++      K+ K PP  C  P+R+  RF
Sbjct: 43  EPEEKQALKRLVEEEPLKMQVDEAASREDKLDLT------KKGKRPPTPCSDPERKRFRF 96

Query: 553 SNQRNSTVRVSTP 591
           +++  S    S+P
Sbjct: 97  NSESESGSEASSP 109



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>HUTU_VIBPA (Q87Q76) Urocanate hydratase (EC 4.2.1.49) (Urocanase)|
           (Imidazolonepropionate hydrolase)
          Length = 565

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -3

Query: 297 GGGVGRFIQVHDGFIVCSPPSANRTHHLSKLLTN 196
           GGGVG     H G ++C   S + +  ++++L N
Sbjct: 493 GGGVGMGFSQHSGMVICCDGSDDASQRIARVLHN 526



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>GFC1_HUMAN (P63117) HERV-F(c)1_Xq21.33 provirus ancestral Gag polyprotein (Gag|
           polyprotein) [Contains: Matrix protein; Capsid protein]
          Length = 469

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
 Frame = +1

Query: 7   PRXAAANPTYAGR--PPPAALRFKQESRTNPILPPIDTIPPRIGSSAHLAANQD 162
           P  AA  P Y G   P P A        ++P  PP   +PP    SAH  +  D
Sbjct: 132 PLPAALPPPYPGSSGPTPTAPPLPPTPPSSPANPPASALPPPSPVSAHTRSKTD 185



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>RCOR3_MOUSE (Q6PGA0) REST corepressor 3|
          Length = 451

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
 Frame = +1

Query: 22  ANPTYAGRPPPAA--LRFKQESRT-----NPILPPIDTIPPRIGSSAHLAANQDPHPPSR 180
           A P    +PPP     RF Q   T      P++ P +++PPR+     L       PPS 
Sbjct: 380 AAPALHRQPPPLQQQARFIQPRPTLNQPPPPLIRPANSMPPRLNPRPVLTTVGGQQPPSL 439

Query: 181 LGFAT 195
           +G  T
Sbjct: 440 IGIQT 444



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>SEM5B_MOUSE (Q60519) Semaphorin-5B precursor (Semaphorin G) (Sema G)|
          Length = 1093

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 26/93 (27%), Positives = 32/93 (34%), Gaps = 3/93 (3%)
 Frame = -2

Query: 349  AWPVCPRWSEARAGCLXXXXRWEIHPSPRRLHRVLASKRQPYPSPFEAAYQSLQTLIG*A 170
            AW     WS+  A C                ++   S   P PSP E             
Sbjct: 854  AWSCWTAWSQCSASCGGGH------------YQRTRSCTSPAPSPGE------------- 888

Query: 169  DVDLGLQRGEQM---SRCVEGWYLWAEGSGWSV 80
            D+ LGL   E +     C EGW LW+E   W V
Sbjct: 889  DICLGLHTEEALCSTQACPEGWSLWSE---WGV 918



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>MYPC3_HUMAN (Q14896) Myosin-binding protein C, cardiac-type (Cardiac MyBP-C)|
           (C-protein, cardiac muscle isoform)
          Length = 1274

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -1

Query: 305 PPPAAALGDSSKSTTASSCARLQAPT 228
           P PAA LG+S+ S   SS A L  PT
Sbjct: 121 PAPAAELGESAPSPKGSSSAALNGPT 146


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.131    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,085,192
Number of Sequences: 219361
Number of extensions: 1870205
Number of successful extensions: 5511
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5481
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5424720305
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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