ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags36f22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_866040.1| PREDICTED: Bos taurus similar to CG7289-PA, transcript variant 3 (LOC506454), mRNA Length = 2602 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 37 gcaggccgcccgccgcccgccgcgc 61 ||||||||||||||||||||||||| Sbjct: 174 gcaggccgcccgccgcccgccgcgc 150
>ref|XM_582902.2| PREDICTED: Bos taurus similar to CG7289-PA, transcript variant 1 (LOC506454), mRNA Length = 2604 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 37 gcaggccgcccgccgcccgccgcgc 61 ||||||||||||||||||||||||| Sbjct: 174 gcaggccgcccgccgcccgccgcgc 150
>gb|BC012878.1| Mus musculus RIKEN cDNA 2510039O18 gene, mRNA (cDNA clone MGC:19317 IMAGE:4190292), complete cds Length = 2720 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 37 gcaggccgcccgccgcccgccgcgc 61 ||||||||||||||||||||||||| Sbjct: 245 gcaggccgcccgccgcccgccgcgc 221
>ref|NM_029841.1| Mus musculus RIKEN cDNA 2510039O18 gene (2510039O18Rik), mRNA Length = 2731 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 37 gcaggccgcccgccgcccgccgcgc 61 ||||||||||||||||||||||||| Sbjct: 272 gcaggccgcccgccgcccgccgcgc 248
>ref|NM_138346.1| Homo sapiens KIAA2013 (KIAA2013), mRNA Length = 2362 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 37 gcaggccgcccgccgcccgccgcgc 61 ||||||||||||||||||||||||| Sbjct: 336 gcaggccgcccgccgcccgccgcgc 312
>ref|XM_535403.2| PREDICTED: Canis familiaris similar to CG7289-PA (LOC478228), mRNA Length = 2564 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 37 gcaggccgcccgccgcccgccgcgc 61 ||||||||||||||||||||||||| Sbjct: 142 gcaggccgcccgccgcccgccgcgc 118
>gb|BC112864.1| Bos taurus similar to CG7289-PA, transcript variant 1, mRNA (cDNA clone MGC:137732 IMAGE:8168835), complete cds Length = 2239 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 37 gcaggccgcccgccgcccgccgcgc 61 ||||||||||||||||||||||||| Sbjct: 230 gcaggccgcccgccgcccgccgcgc 206
>emb|AL096840.25|HSJ1077B9 Human DNA sequence from clone RP5-1077B9 on chromosome 1p36.11-36.32 Contains the 5' end of a novel gene, the PLOD gene for procollagen-lysine, 2-oxoglutarate 5-dioxygenase (lysine hydroxylase, Ehlers-Danlos syndrome type VI), the MFN2 gene for mitofusin 2 and a novel gene, complete sequence Length = 126525 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 37 gcaggccgcccgccgcccgccgcgc 61 ||||||||||||||||||||||||| Sbjct: 4107 gcaggccgcccgccgcccgccgcgc 4131
>gb|BC035033.1| Homo sapiens KIAA2013, mRNA (cDNA clone MGC:33867 IMAGE:5264442), complete cds Length = 2362 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 37 gcaggccgcccgccgcccgccgcgc 61 ||||||||||||||||||||||||| Sbjct: 336 gcaggccgcccgccgcccgccgcgc 312
>dbj|AK153761.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630078E21 product:hypothetical protein, full insert sequence Length = 2270 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 37 gcaggccgcccgccgcccgccgcgc 61 ||||||||||||||||||||||||| Sbjct: 273 gcaggccgcccgccgcccgccgcgc 249
>dbj|AK011059.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510039O18 product:hypothetical protein, full insert sequence Length = 2731 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 37 gcaggccgcccgccgcccgccgcgc 61 ||||||||||||||||||||||||| Sbjct: 272 gcaggccgcccgccgcccgccgcgc 248
>dbj|AK173332.1| Mus musculus mRNA for mKIAA2013 protein Length = 3725 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 37 gcaggccgcccgccgcccgccgcgc 61 ||||||||||||||||||||||||| Sbjct: 127 gcaggccgcccgccgcccgccgcgc 103
>dbj|AK194052.1| Mus musculus cDNA, clone:Y1G0114C18, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000057149, based on BLAT search Length = 101 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 37 gcaggccgcccgccgcccgccgcgc 61 ||||||||||||||||||||||||| Sbjct: 82 gcaggccgcccgccgcccgccgcgc 58
>dbj|AB095933.1| Homo sapiens mRNA for KIAA2013 protein Length = 2538 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 37 gcaggccgcccgccgcccgccgcgc 61 ||||||||||||||||||||||||| Sbjct: 333 gcaggccgcccgccgcccgccgcgc 309
>emb|AL607066.23| Mouse DNA sequence from clone RP23-406N5 on chromosome 4, complete sequence Length = 194837 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 37 gcaggccgcccgccgcccgccgcgc 61 ||||||||||||||||||||||||| Sbjct: 150830 gcaggccgcccgccgcccgccgcgc 150806
>ref|XM_849032.1| PREDICTED: Canis familiaris similar to TC10-like Rho GTPase (LOC612985), mRNA Length = 1088 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 41 gccgcccgccgcccgccgcgctcc 64 |||||||||||||||||||||||| Sbjct: 341 gccgcccgccgcccgccgcgctcc 364
>ref|XM_483431.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1350 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 516 tgttatatgcctttctccggacagggaagaa 546 |||||||||||||||||| || ||||||||| Sbjct: 1062 tgttatatgcctttctccagatagggaagaa 1092
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 212 gaaaggtgatgggtacggttggc 234 ||||||||||||||||||||||| Sbjct: 3597627 gaaaggtgatgggtacggttggc 3597649
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 516 tgttatatgcctttctccggacagggaagaa 546 |||||||||||||||||| || ||||||||| Sbjct: 26183191 tgttatatgcctttctccagatagggaagaa 26183161 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcgc 61 ||||||||||||||||||||| Sbjct: 23226952 gccgcccgccgcccgccgcgc 23226932 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 gccgcccgccgcccgccgcgctcc 64 ||||||||||||||||||| |||| Sbjct: 9973532 gccgcccgccgcccgccgctctcc 9973555
>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1191_A10 Length = 140643 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 516 tgttatatgcctttctccggacagggaagaa 546 |||||||||||||||||| || ||||||||| Sbjct: 127122 tgttatatgcctttctccagatagggaagaa 127092
>dbj|AP003857.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_E06 Length = 112241 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 516 tgttatatgcctttctccggacagggaagaa 546 |||||||||||||||||| || ||||||||| Sbjct: 16116 tgttatatgcctttctccagatagggaagaa 16086
>gb|AC112215.3| Homo sapiens chromosome 3 clone RP11-844E22, complete sequence Length = 199310 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 41 gccgcccgccgcccgccgcgctccga 66 ||||||||||||||||||| |||||| Sbjct: 83699 gccgcccgccgcccgccgccctccga 83724
>gb|AC105934.3| Homo sapiens chromosome 3 clone RP11-620K19, complete sequence Length = 217029 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 41 gccgcccgccgcccgccgcgctccga 66 ||||||||||||||||||| |||||| Sbjct: 75347 gccgcccgccgcccgccgccctccga 75372
>ref|XM_470867.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 609 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 282 tcccaacgccgccgccggcggaggcagccagca 314 ||||| ||||||||||||||| |||||||||| Sbjct: 442 tcccaccgccgccgccggcggccgcagccagca 410
>gb|AC116368.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0061D06, complete sequence Length = 172126 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 287 acgccgccgccggcggaggcagcca 311 |||||||||||||||| |||||||| Sbjct: 54256 acgccgccgccggcggcggcagcca 54280
>gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0004M10, complete sequence Length = 152423 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 282 tcccaacgccgccgccggcggaggcagccagca 314 ||||| ||||||||||||||| |||||||||| Sbjct: 125340 tcccaccgccgccgccggcggccgcagccagca 125372
>gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0017D10, complete sequence Length = 149870 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gccgcccgccgcccgccgcgc 61 ||||||||||||||||||||| Sbjct: 64438 gccgcccgccgcccgccgcgc 64458
>ref|XM_598075.2| PREDICTED: Bos taurus similar to granulosa cell HMG-box protein-1 (LOC519845), partial mRNA Length = 1963 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 aggccgcccgccgcccgccgc 59 ||||||||||||||||||||| Sbjct: 1205 aggccgcccgccgcccgccgc 1225
>ref|XM_584091.2| PREDICTED: Bos taurus similar to hairy and enhancer of split 4 (LOC507480), mRNA Length = 669 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 ctacgcaggccgcccgccgcc 53 ||||||||||||||||||||| Sbjct: 510 ctacgcaggccgcccgccgcc 530
>ref|NM_001003341.1| Canis familiaris CD34 molecule (CD34), mRNA Length = 2956 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcgctccg 65 ||||||||||||||||||| ||||| Sbjct: 202 gccgcccgccgcccgccgccctccg 178
>gb|AC148824.5| Pan troglodytes BAC clone CH251-507H8 from chromosome 7, complete sequence Length = 189932 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 gcaggccgcccgccgcccgccgcgc 61 |||||||||||||||||||| |||| Sbjct: 88677 gcaggccgcccgccgcccgctgcgc 88701
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gccgcccgccgcccgccgcgc 61 ||||||||||||||||||||| Sbjct: 1674914 gccgcccgccgcccgccgcgc 1674934
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 282 tcccaacgccgccgccggcggaggcagccagca 314 ||||| ||||||||||||||| |||||||||| Sbjct: 15863540 tcccaccgccgccgccggcggccgcagccagca 15863572
>ref|XM_862646.1| PREDICTED: Canis familiaris hypothetical protein LOC610962 (LOC610962), mRNA Length = 579 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 aggccgcccgccgcccgccgc 59 ||||||||||||||||||||| Sbjct: 233 aggccgcccgccgcccgccgc 253
>ref|XM_845826.1| PREDICTED: Canis familiaris similar to brain-selective kinase 2 isoform gamma, transcript variant 2 (LOC483658), mRNA Length = 2031 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 ggccgcccgccgcccgccgcg 60 ||||||||||||||||||||| Sbjct: 2000 ggccgcccgccgcccgccgcg 2020
>ref|XM_857539.1| PREDICTED: Canis familiaris similar to brain-selective kinase 2 isoform gamma, transcript variant 5 (LOC483658), mRNA Length = 1983 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 ggccgcccgccgcccgccgcg 60 ||||||||||||||||||||| Sbjct: 1952 ggccgcccgccgcccgccgcg 1972
>ref|XM_859467.1| PREDICTED: Canis familiaris hypothetical protein LOC609518 (LOC609518), mRNA Length = 1299 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcgc 61 ||||||||||||||||||||| Sbjct: 304 gccgcccgccgcccgccgcgc 284
>ref|XM_546840.2| PREDICTED: Canis familiaris similar to zinc finger protein 23, transcript variant 1 (LOC489720), mRNA Length = 2755 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcgc 61 ||||||||||||||||||||| Sbjct: 21 gccgcccgccgcccgccgcgc 1
>ref|XM_857360.1| PREDICTED: Canis familiaris similar to zinc finger protein 23, transcript variant 5 (LOC489720), mRNA Length = 2686 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcgc 61 ||||||||||||||||||||| Sbjct: 21 gccgcccgccgcccgccgcgc 1
>ref|XM_857334.1| PREDICTED: Canis familiaris similar to zinc finger protein 23, transcript variant 4 (LOC489720), mRNA Length = 2671 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcgc 61 ||||||||||||||||||||| Sbjct: 21 gccgcccgccgcccgccgcgc 1
>ref|XM_857302.1| PREDICTED: Canis familiaris similar to zinc finger protein 23, transcript variant 3 (LOC489720), mRNA Length = 2671 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcgc 61 ||||||||||||||||||||| Sbjct: 21 gccgcccgccgcccgccgcgc 1
>ref|XM_857274.1| PREDICTED: Canis familiaris similar to zinc finger protein 23, transcript variant 2 (LOC489720), mRNA Length = 2677 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcgc 61 ||||||||||||||||||||| Sbjct: 21 gccgcccgccgcccgccgcgc 1
>gb|BC093047.1| Homo sapiens CD81 molecule, mRNA (cDNA clone MGC:111086 IMAGE:30398483), complete cds Length = 1491 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 cgcaggccgcccgccgcccgc 56 ||||||||||||||||||||| Sbjct: 205 cgcaggccgcccgccgcccgc 225
>gb|BC002978.1| Homo sapiens CD81 molecule, mRNA (cDNA clone MGC:2221 IMAGE:3510634), complete cds Length = 1333 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 cgcaggccgcccgccgcccgc 56 ||||||||||||||||||||| Sbjct: 14 cgcaggccgcccgccgcccgc 34
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 281 ctcccaacgccgccgccggcg 301 ||||||||||||||||||||| Sbjct: 262333 ctcccaacgccgccgccggcg 262313
>emb|AL355490.24| Human DNA sequence from clone RP11-452K12 on chromosome 10 Contains the FRAT1 gene for frequently rearranged in advanced T-cell lymphomas, the FRAT2 gene for frequently rearranged in advanced T-cell lymphomas 2, two novel genes, the gene for a novel protein (FLJ12434,KIAA0690), the PGAM1 gene for phosphoglycerate mutase 1 (brain), the CSL4 gene for exosomal core protein CSL4, the ZDHHC16 gene for zinc finger, DHHC domain containing 16, the 3' end of the MMS19L gene for MMS19-like (MET18 homolog, S. cerevisiae), a ribosomal protein L12 (RPL12) pseudogene, a ribosomal protein L34 (RPL34) pseudogene and four CpG islands, complete sequence Length = 190803 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 41 gccgcccgccgcccgccgcgctccg 65 ||||||||||||||||||| ||||| Sbjct: 127789 gccgcccgccgcccgccgccctccg 127813
>emb|AL158822.19| Human DNA sequence from clone RP11-100C15 on chromosome 9q34.2-34.3 Contains the 3' end of a novel gene containing DKFZp434G2311, the KCNT1 gene for member 1 of the potassium channel subfamily T, the 3' end of a novel gene, part of the gene for a novel protein similar to mouse RIKEN 9230102I19 (9230102I19RIK) and nine CpG islands, complete sequence Length = 187336 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcgc 61 ||||||||||||||||||||| Sbjct: 99043 gccgcccgccgcccgccgcgc 99023
>ref|NM_004356.3| Homo sapiens CD81 molecule (CD81), mRNA Length = 1497 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 cgcaggccgcccgccgcccgc 56 ||||||||||||||||||||| Sbjct: 207 cgcaggccgcccgccgcccgc 227
>gb|AC129929.5| Homo sapiens chromosome 11, clone RP5-1075F20, complete sequence Length = 141449 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 cgcaggccgcccgccgcccgc 56 ||||||||||||||||||||| Sbjct: 9574 cgcaggccgcccgccgcccgc 9554
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gccgcccgccgcccgccgcgc 61 ||||||||||||||||||||| Sbjct: 3009880 gccgcccgccgcccgccgcgc 3009900
>emb|AJ720223.1| Gallus gallus mRNA for hypothetical protein, clone 13a8 Length = 698 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 gcccgccgcccgccgcgctcc 64 ||||||||||||||||||||| Sbjct: 76 gcccgccgcccgccgcgctcc 56
>ref|NM_001006553.1| Gallus gallus NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa (NDUFB5), mRNA Length = 698 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 gcccgccgcccgccgcgctcc 64 ||||||||||||||||||||| Sbjct: 76 gcccgccgcccgccgcgctcc 56
>emb|CR625241.1| full-length cDNA clone CS0DI084YG22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1318 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 cgcaggccgcccgccgcccgc 56 ||||||||||||||||||||| Sbjct: 230 cgcaggccgcccgccgcccgc 250
>emb|CR621738.1| full-length cDNA clone CS0DD005YK13 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1324 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 cgcaggccgcccgccgcccgc 56 ||||||||||||||||||||| Sbjct: 73 cgcaggccgcccgccgcccgc 93
>emb|CR608902.1| full-length cDNA clone CS0DF001YD07 of Fetal brain of Homo sapiens (human) Length = 1426 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 cgcaggccgcccgccgcccgc 56 ||||||||||||||||||||| Sbjct: 198 cgcaggccgcccgccgcccgc 218
>emb|CR605197.1| full-length cDNA clone CS0DI083YP18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1355 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 cgcaggccgcccgccgcccgc 56 ||||||||||||||||||||| Sbjct: 203 cgcaggccgcccgccgcccgc 223
>emb|CR604916.1| full-length cDNA clone CS0DI063YF22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1434 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 cgcaggccgcccgccgcccgc 56 ||||||||||||||||||||| Sbjct: 199 cgcaggccgcccgccgcccgc 219
>emb|CR604277.1| full-length cDNA clone CL0BB022ZG04 of Neuroblastoma of Homo sapiens (human) Length = 1458 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 cgcaggccgcccgccgcccgc 56 ||||||||||||||||||||| Sbjct: 190 cgcaggccgcccgccgcccgc 210
>emb|CR604204.1| full-length cDNA clone CS0DE002YN02 of Placenta of Homo sapiens (human) Length = 1414 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 cgcaggccgcccgccgcccgc 56 ||||||||||||||||||||| Sbjct: 190 cgcaggccgcccgccgcccgc 210
>emb|CR601869.1| full-length cDNA clone CS0DF026YD10 of Fetal brain of Homo sapiens (human) Length = 1419 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 cgcaggccgcccgccgcccgc 56 ||||||||||||||||||||| Sbjct: 198 cgcaggccgcccgccgcccgc 218
>emb|CR599310.1| full-length cDNA clone CS0DI067YF14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1245 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 cgcaggccgcccgccgcccgc 56 ||||||||||||||||||||| Sbjct: 17 cgcaggccgcccgccgcccgc 37
>emb|CR598183.1| full-length cDNA clone CS0DI081YK20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1399 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 cgcaggccgcccgccgcccgc 56 ||||||||||||||||||||| Sbjct: 160 cgcaggccgcccgccgcccgc 180
>emb|CR597764.1| full-length cDNA clone CS0DM010YM15 of Fetal liver of Homo sapiens (human) Length = 1456 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 cgcaggccgcccgccgcccgc 56 ||||||||||||||||||||| Sbjct: 203 cgcaggccgcccgccgcccgc 223
>emb|CR597135.1| full-length cDNA clone CS0DL007YB20 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 2162 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 gcaggccgcccgccgcccgccgcgc 61 |||||||||||||||||||| |||| Sbjct: 207 gcaggccgcccgccgcccgctgcgc 183
>emb|CR597052.1| full-length cDNA clone CL0BA008ZD03 of Placenta of Homo sapiens (human) Length = 1416 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 cgcaggccgcccgccgcccgc 56 ||||||||||||||||||||| Sbjct: 181 cgcaggccgcccgccgcccgc 201
>tpg|BK000724.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M112, complete sequence Length = 962 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 41 gccgcccgccgcccgccgcgctccg 65 ||||||||||||||||||| ||||| Sbjct: 542 gccgcccgccgcccgccgccctccg 566
>emb|CR593787.1| full-length cDNA clone CS0DE005YJ15 of Placenta of Homo sapiens (human) Length = 1412 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 cgcaggccgcccgccgcccgc 56 ||||||||||||||||||||| Sbjct: 190 cgcaggccgcccgccgcccgc 210
>gb|BC102513.1| Bos taurus CD81 antigen (target of antiproliferative antibody 1), mRNA (cDNA clone MGC:127931 IMAGE:7954992), complete cds Length = 1477 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 cgcaggccgcccgccgcccgc 56 ||||||||||||||||||||| Sbjct: 200 cgcaggccgcccgccgcccgc 220
>gb|BC102821.1| Bos taurus similar to Transcription factor GATA-5 (GATA-binding factor 5), mRNA (cDNA clone MGC:127645 IMAGE:7951015), complete cds Length = 2119 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gccgcccgccgcccgccgcgc 61 ||||||||||||||||||||| Sbjct: 46 gccgcccgccgcccgccgcgc 66
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gccgcccgccgcccgccgcgc 61 ||||||||||||||||||||| Sbjct: 27410787 gccgcccgccgcccgccgcgc 27410807 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcg 60 |||||||||||||||||||| Sbjct: 18253946 gccgcccgccgcccgccgcg 18253927
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 287 acgccgccgccggcggaggcagcca 311 |||||||||||||||| |||||||| Sbjct: 9695421 acgccgccgccggcggcggcagcca 9695397
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 41 gccgcccgccgcccgccgcgctccg 65 ||||||||||||||||||| ||||| Sbjct: 14348933 gccgcccgccgcccgccgccctccg 14348957
>gb|AC138932.4| Homo sapiens chromosome 16 clone RP11-680G24, complete sequence Length = 180798 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 gcaggccgcccgccgcccgccgcgc 61 |||||||||||||||||||| |||| Sbjct: 49148 gcaggccgcccgccgcccgctgcgc 49124
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gccgcccgccgcccgccgcgc 61 ||||||||||||||||||||| Sbjct: 20066113 gccgcccgccgcccgccgcgc 20066133 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcg 60 |||||||||||||||||||| Sbjct: 28008722 gccgcccgccgcccgccgcg 28008703 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcg 60 |||||||||||||||||||| Sbjct: 21949372 gccgcccgccgcccgccgcg 21949353
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 282 tcccaacgccgccgccggcggaggcagccagca 314 ||||| ||||||||||||||| |||||||||| Sbjct: 15858074 tcccaccgccgccgccggcggccgcagccagca 15858106
>gb|AC027662.2|AC027662 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0053G13, complete sequence Length = 138245 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 41 gccgcccgccgcccgccgcgctccg 65 ||||||||||||||||||| ||||| Sbjct: 96208 gccgcccgccgcccgccgccctccg 96232
>gb|AC136427.3| Homo sapiens chromosome 16 clone RP11-103G5, complete sequence Length = 145971 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 gcaggccgcccgccgcccgccgcgc 61 |||||||||||||||||||| |||| Sbjct: 14104 gcaggccgcccgccgcccgctgcgc 14080
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cgcccgccgcccgccgcgctc 63 ||||||||||||||||||||| Sbjct: 1974500 cgcccgccgcccgccgcgctc 1974520
>ref|XM_243032.3| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 2510039O18 (predicted) (LOC313699), mRNA Length = 2719 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 gcaggccgcccgccgcccgccgcgc 61 ||||||| ||||||||||||||||| Sbjct: 272 gcaggccacccgccgcccgccgcgc 248
>gb|AC091012.8| Homo sapiens chromosome 11, clone RP11-113A6, complete sequence Length = 145042 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 cgcaggccgcccgccgcccgc 56 ||||||||||||||||||||| Sbjct: 93291 cgcaggccgcccgccgcccgc 93311
>gb|AC136026.3| Homo sapiens chromosome 16 clone RP11-447K24, complete sequence Length = 184471 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 gcaggccgcccgccgcccgccgcgc 61 |||||||||||||||||||| |||| Sbjct: 62480 gcaggccgcccgccgcccgctgcgc 62504
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 gtcgtggacttggatgaatct 282 ||||||||||||||||||||| Sbjct: 639350 gtcgtggacttggatgaatct 639330
>dbj|AP004457.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0013B04 Length = 141319 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcgc 61 ||||||||||||||||||||| Sbjct: 26303 gccgcccgccgcccgccgcgc 26283
>gb|AC123644.8| Mus musculus chromosome 15, clone RP23-85G7, complete sequence Length = 186827 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 gacttggatgaatctcccaac 288 ||||||||||||||||||||| Sbjct: 175730 gacttggatgaatctcccaac 175750
>dbj|AK101114.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025G10, full insert sequence Length = 2664 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 281 ctcccaacgccgccgccggcg 301 ||||||||||||||||||||| Sbjct: 294 ctcccaacgccgccgccggcg 314
>dbj|AK060336.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-C05, full insert sequence Length = 1082 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gccgcccgccgcccgccgcgc 61 ||||||||||||||||||||| Sbjct: 36 gccgcccgccgcccgccgcgc 56
>gb|AC137950.16| Mus musculus chromosome 15, clone RP24-356L7, complete sequence Length = 182058 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 268 gacttggatgaatctcccaac 288 ||||||||||||||||||||| Sbjct: 161643 gacttggatgaatctcccaac 161623
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 41 gccgcccgccgcccgccgcgctccg 65 ||||||||||||||||||| ||||| Sbjct: 14357175 gccgcccgccgcccgccgccctccg 14357199
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 287 acgccgccgccggcggaggcagcca 311 |||||||||||||||| |||||||| Sbjct: 9767118 acgccgccgccggcggcggcagcca 9767094
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gccgcccgccgcccgccgcgc 61 ||||||||||||||||||||| Sbjct: 27336387 gccgcccgccgcccgccgcgc 27336407 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcg 60 |||||||||||||||||||| Sbjct: 18180267 gccgcccgccgcccgccgcg 18180248
>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124605 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gccgcccgccgcccgccgcgc 61 ||||||||||||||||||||| Sbjct: 79107 gccgcccgccgcccgccgcgc 79127
>gb|AC002536.1|AC002536 Human Chromosome 11 pac pDJ1075f20, complete sequence Length = 140977 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 cgcaggccgcccgccgcccgc 56 ||||||||||||||||||||| Sbjct: 131404 cgcaggccgcccgccgcccgc 131424
>gb|U49457.1|CFU49457 Canis familiaris hematopoietic progenitor cell marker CD34 mRNA, complete cds Length = 2956 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcgctccg 65 ||||||||||||||||||| ||||| Sbjct: 202 gccgcccgccgcccgccgccctccg 178
>ref|NM_001035099.1| Bos taurus CD81 antigen (target of antiproliferative antibody 1) (CD81), mRNA Length = 1477 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 cgcaggccgcccgccgcccgc 56 ||||||||||||||||||||| Sbjct: 200 cgcaggccgcccgccgcccgc 220
>ref|NM_001034221.1| Bos taurus similar to Transcription factor GATA-5 (GATA-binding factor 5) (MGC127645), mRNA Length = 2119 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gccgcccgccgcccgccgcgc 61 ||||||||||||||||||||| Sbjct: 46 gccgcccgccgcccgccgcgc 66
>gb|M33680.1|HUMTAPA1 Human 26-kDa cell surface protein TAPA-1 mRNA, complete cds Length = 1496 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 cgcaggccgcccgccgcccgc 56 ||||||||||||||||||||| Sbjct: 212 cgcaggccgcccgccgcccgc 232
>ref|XM_481115.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1063 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcgctcc 64 ||||||||||||||||||| |||| Sbjct: 101 gccgcccgccgcccgccgctctcc 78
>ref|XM_481114.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1855 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcgctcc 64 ||||||||||||||||||| |||| Sbjct: 96 gccgcccgccgcccgccgctctcc 73
>ref|XM_474428.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 624 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 cccaacgccgccgccggcggaggc 306 |||||||||||||||| ||||||| Sbjct: 292 cccaacgccgccgccgccggaggc 315
>gb|BT018679.1| Zea mays clone EL01N0511B10.d mRNA sequence Length = 1532 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 582 cagtacaccaagtgccaatgctgc 605 ||||||||||||||||||| |||| Sbjct: 386 cagtacaccaagtgccaatcctgc 409
>gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1122D01, complete sequence Length = 126532 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcg 60 |||||||||||||||||||| Sbjct: 68586 gccgcccgccgcccgccgcg 68567
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11, complete sequence Length = 204649 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcg 60 |||||||||||||||||||| Sbjct: 88887 gccgcccgccgcccgccgcg 88868
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 317 ggcctccgaccaccgcgggcacac 340 ||||||||||||| |||||||||| Sbjct: 2490346 ggcctccgaccacagcgggcacac 2490369
>ref|XM_421480.1| PREDICTED: Gallus gallus similar to phosphatidic acid-preferring phospholipase A1 (LOC423592), mRNA Length = 1065 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ggccgcccgccgcccgccgc 59 |||||||||||||||||||| Sbjct: 320 ggccgcccgccgcccgccgc 301
>gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0094K23, complete sequence Length = 167482 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggccgcccgccgcccgccgc 59 |||||||||||||||||||| Sbjct: 35757 ggccgcccgccgcccgccgc 35776
>gb|AC183613.3| Pan troglodytes BAC clone CH251-171F23 from chromosome 7, complete sequence Length = 180545 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggccgcccgccgcccgccgc 59 |||||||||||||||||||| Sbjct: 139921 ggccgcccgccgcccgccgc 139940
>gb|AC073846.6| Homo sapiens BAC clone RP11-622P13 from 7, complete sequence Length = 123004 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggccgcccgccgcccgccgc 59 |||||||||||||||||||| Sbjct: 47364 ggccgcccgccgcccgccgc 47383
>ref|XM_849001.1| PREDICTED: Canis familiaris similar to endothelial differentiation, sphingolipid G-protein-coupled receptor, 8, transcript variant 1 (LOC610828), mRNA Length = 1197 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gcccgccgcccgccgcgctc 63 |||||||||||||||||||| Sbjct: 718 gcccgccgcccgccgcgctc 737
>ref|XM_863096.1| PREDICTED: Canis familiaris similar to endothelial differentiation, sphingolipid G-protein-coupled receptor, 8, transcript variant 2 (LOC610828), mRNA Length = 765 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gcccgccgcccgccgcgctc 63 |||||||||||||||||||| Sbjct: 286 gcccgccgcccgccgcgctc 305
>emb|AL157879.7| Human DNA sequence from clone RP11-110H4 on chromosome 5, complete sequence Length = 161460 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 ctgcaaaccaagatccacat 168 |||||||||||||||||||| Sbjct: 129742 ctgcaaaccaagatccacat 129761
>gb|AC093243.2| Homo sapiens chromosome 5 clone RP11-110H4, complete sequence Length = 161460 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 ctgcaaaccaagatccacat 168 |||||||||||||||||||| Sbjct: 129741 ctgcaaaccaagatccacat 129760
>gb|AF447814.1| Escherichia coli strain CFT073 pathogenicity island II, partial sequence Length = 71684 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 acaaacgccggaaggttcca 513 |||||||||||||||||||| Sbjct: 49545 acaaacgccggaaggttcca 49564
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 acaaacgccggaaggttcca 513 |||||||||||||||||||| Sbjct: 4928988 acaaacgccggaaggttcca 4929007
>gb|AC175606.3| Cavia porcellus clone CH234-500H3, complete sequence Length = 94354 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcg 60 |||||||||||||||||||| Sbjct: 12521 gccgcccgccgcccgccgcg 12502
>emb|AL133255.14| Human DNA sequence from clone RP11-239L20 on chromosome 6 Contains the gene for a novel protein similar to spinal muscular atrophy region protein SMA3, a beta glucuronidase (GUSB) pseudogene, a pseudogene similar to nuclear envelope pore membrane protein POM121 (NUP121) ESTs, STSs, GSSs and a CpG island, complete sequence Length = 152782 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 ctgcaaaccaagatccacat 168 |||||||||||||||||||| Sbjct: 76532 ctgcaaaccaagatccacat 76551
>ref|XM_792504.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC593006 (LOC593006), mRNA Length = 1071 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tctcccaacgccgccgccgg 299 |||||||||||||||||||| Sbjct: 247 tctcccaacgccgccgccgg 266
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 tcccaacgccgccgccggcg 301 |||||||||||||||||||| Sbjct: 219307 tcccaacgccgccgccggcg 219326
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14 Length = 344321 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 tcccaacgccgccgccggcg 301 |||||||||||||||||||| Sbjct: 165703 tcccaacgccgccgccggcg 165722
>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12, complete sequence Length = 144670 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 cccaacgccgccgccggcggaggc 306 |||||||||||||||| ||||||| Sbjct: 57819 cccaacgccgccgccgccggaggc 57796
>gb|AC109322.16| Homo sapiens chromosome 8, clone CTD-3065J16, complete sequence Length = 215342 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 gccgcccgccgcccgccgcgctcc 64 ||||||||||||||||||| |||| Sbjct: 41870 gccgcccgccgcccgccgccctcc 41893
>emb|AJ488511.1|ECO488511 Escherichia coli pathogenicity island I, strain 536 Length = 76915 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 acaaacgccggaaggttcca 513 |||||||||||||||||||| Sbjct: 69796 acaaacgccggaaggttcca 69777
>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome Length = 156789 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggccgcccgccgcccgccgc 59 |||||||||||||||||||| Sbjct: 116645 ggccgcccgccgcccgccgc 116664
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcg 60 |||||||||||||||||||| Sbjct: 3532232 gccgcccgccgcccgccgcg 3532213
>gb|AC182764.2| Gallus gallus BAC clone CH261-140B3 from chromosome 1, complete sequence Length = 192460 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gcccgccgcccgccgcgctc 63 |||||||||||||||||||| Sbjct: 72740 gcccgccgcccgccgcgctc 72759
>gb|AC096759.3| Homo sapiens BAC clone RP11-567N4 from 4, complete sequence Length = 196363 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cggctcatctgctcacctcg 148 |||||||||||||||||||| Sbjct: 155590 cggctcatctgctcacctcg 155609
>emb|AJ748745.1| Haloferax volcanii lhr gene for putative helicase Lhr Length = 4004 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 ctccgaccaccgcgggcaca 339 |||||||||||||||||||| Sbjct: 649 ctccgaccaccgcgggcaca 668
>emb|CR406907.1| Gallus gallus finished cDNA, clone ChEST923p13 Length = 785 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ggccgcccgccgcccgccgc 59 |||||||||||||||||||| Sbjct: 40 ggccgcccgccgcccgccgc 21
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 cccaacgccgccgccggcggaggc 306 |||||||||||||||| ||||||| Sbjct: 35121316 cccaacgccgccgccgccggaggc 35121293
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggccgcccgccgcccgccgc 59 |||||||||||||||||||| Sbjct: 19440350 ggccgcccgccgcccgccgc 19440369
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 cgccgccgccggcggaggcagcca 311 |||||||| ||||||||||||||| Sbjct: 2709274 cgccgccggcggcggaggcagcca 2709297
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggccgcccgccgcccgccgc 59 |||||||||||||||||||| Sbjct: 35006829 ggccgcccgccgcccgccgc 35006848
>gb|AC138951.2| Homo sapiens chromosome 5 clone RP11-823P9, complete sequence Length = 223346 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 ctgcaaaccaagatccacat 168 |||||||||||||||||||| Sbjct: 166659 ctgcaaaccaagatccacat 166678
>gb|AC008760.7| Homo sapiens chromosome 19 clone CTD-3128G10, complete sequence Length = 200167 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcgctcc 64 ||||||||||||||||||| |||| Sbjct: 175401 gccgcccgccgcccgccgccctcc 175378
>gb|AC007002.3| Homo sapiens BAC clone RP11-493L16 from 2, complete sequence Length = 140331 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggccgcccgccgcccgccgc 59 |||||||||||||||||||| Sbjct: 122515 ggccgcccgccgcccgccgc 122534
>gb|AC138821.2| Homo sapiens chromosome 5 clone RP11-1104E16, complete sequence Length = 182236 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 ctgcaaaccaagatccacat 168 |||||||||||||||||||| Sbjct: 31905 ctgcaaaccaagatccacat 31924
>gb|AC137781.2| Homo sapiens chromosome 5 clone RP11-1108I11, complete sequence Length = 161893 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 ctgcaaaccaagatccacat 168 |||||||||||||||||||| Sbjct: 54788 ctgcaaaccaagatccacat 54807
>gb|AC138410.1| Homo sapiens chromosome 5 clone RP11-1124O10, complete sequence Length = 152445 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 ctgcaaaccaagatccacat 168 |||||||||||||||||||| Sbjct: 124148 ctgcaaaccaagatccacat 124167
>gb|AC138409.1| Homo sapiens chromosome 5 clone RP11-1023L17, complete sequence Length = 187740 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 ctgcaaaccaagatccacat 168 |||||||||||||||||||| Sbjct: 134452 ctgcaaaccaagatccacat 134471
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485B12 Length = 156047 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggccgcccgccgcccgccgc 59 |||||||||||||||||||| Sbjct: 13979 ggccgcccgccgcccgccgc 13998
>dbj|AP003302.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0703B11 Length = 144074 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggccgcccgccgcccgccgc 59 |||||||||||||||||||| Sbjct: 51057 ggccgcccgccgcccgccgc 51076
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 cgccgccgccggcggaggcagcca 311 |||||||| ||||||||||||||| Sbjct: 164615 cgccgccggcggcggaggcagcca 164638
>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529C07 Length = 174011 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 cgccgccgccggcggaggcagcca 311 |||||||| ||||||||||||||| Sbjct: 121021 cgccgccggcggcggaggcagcca 121044
>dbj|AP006158.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1127C04 Length = 121441 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 gccgcccgccgcccgccgcgctcc 64 ||||||||||||||||||| |||| Sbjct: 13434 gccgcccgccgcccgccgctctcc 13457
>dbj|AP005697.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0005C03 Length = 166423 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 gccgcccgccgcccgccgcgctcc 64 ||||||||||||||||||| |||| Sbjct: 120779 gccgcccgccgcccgccgctctcc 120802
>dbj|AK105898.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F06, full insert sequence Length = 1063 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcgctcc 64 ||||||||||||||||||| |||| Sbjct: 101 gccgcccgccgcccgccgctctcc 78
>dbj|AK104878.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-E12, full insert sequence Length = 1329 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ggccgcccgccgcccgccgc 59 |||||||||||||||||||| Sbjct: 96 ggccgcccgccgcccgccgc 77
>emb|AJ326796.1|HSA326796 Homo sapiens genomic sequence surrounding NotI site, clone NL4-AF18C Length = 626 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggccgcccgccgcccgccgc 59 |||||||||||||||||||| Sbjct: 3 ggccgcccgccgcccgccgc 22
>dbj|AK070132.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044D05, full insert sequence Length = 566 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 cccaacgccgccgccggcggaggc 306 |||||||||||||||| ||||||| Sbjct: 69 cccaacgccgccgccgccggaggc 92
>dbj|AK067503.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108L16, full insert sequence Length = 1855 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 gccgcccgccgcccgccgcgctcc 64 ||||||||||||||||||| |||| Sbjct: 96 gccgcccgccgcccgccgctctcc 73
>dbj|AK066022.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050L01, full insert sequence Length = 1354 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ggccgcccgccgcccgccgc 59 |||||||||||||||||||| Sbjct: 103 ggccgcccgccgcccgccgc 84
>emb|AL160191.3|CNS01RGT Human chromosome 14 DNA sequence BAC R-486O13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 206256 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ggccgcccgccgcccgccgc 59 |||||||||||||||||||| Sbjct: 8874 ggccgcccgccgcccgccgc 8855
>gb|DQ095216.1| Escherichia coli strain APEC O1 disrupted tRNA-Phe (pheV) gene and pathogenicity island I, complete sequence; and conserved hypothetical protein, polysialic capsule transport protein (kpsF), polysialic acid export protein (kpsE), polysialic acid transport protein precursor (kpsD), CMP-KDO synthetase (kpsU), capsule polysaccharide export protein (kpsC), capsule polysaccharide export protein (kpsS), and polysialyltransferase protein genes, complete cds Length = 66784 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 acaaacgccggaaggttcca 513 |||||||||||||||||||| Sbjct: 47135 acaaacgccggaaggttcca 47116
>emb|AL831799.3|CNS08CAC Oryza sativa chromosome 12, . BAC OSJNBa0087A02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 177034 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gccgcccgccgcccgccgcg 60 |||||||||||||||||||| Sbjct: 117048 gccgcccgccgcccgccgcg 117067 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,276,537 Number of Sequences: 3902068 Number of extensions: 4276537 Number of successful extensions: 95814 Number of sequences better than 10.0: 153 Number of HSP's better than 10.0 without gapping: 158 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92852 Number of HSP's gapped (non-prelim): 2957 length of query: 608 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 585 effective length of database: 17,143,297,704 effective search space: 10028829156840 effective search space used: 10028829156840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
