ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags36f21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CIA1_SCHPO (O74515) Histone chaperone cia1 44 9e-05
2ASF1_YEAST (P32447) Anti-silencing protein 1 40 0.002
3ETV5_HUMAN (P41161) ETS translocation variant 5 (Ets-related pro... 28 5.2
4K6PF_HAECO (Q27665) 6-phosphofructokinase (EC 2.7.1.11) (Phospho... 28 6.7

>CIA1_SCHPO (O74515) Histone chaperone cia1|
          Length = 262

 Score = 44.3 bits (103), Expect = 9e-05
 Identities = 19/33 (57%), Positives = 26/33 (78%)
 Frame = +2

Query: 83  MSAVNITNVAVLDNPTAFLNPFQFEISYECLVP 181
           MS VNI +V VL+NP  F +P++FEI++ECL P
Sbjct: 1   MSIVNILSVNVLNNPAKFSDPYKFEITFECLEP 33



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>ASF1_YEAST (P32447) Anti-silencing protein 1|
          Length = 279

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 15/31 (48%), Positives = 24/31 (77%)
 Frame = +2

Query: 83  MSAVNITNVAVLDNPTAFLNPFQFEISYECL 175
           MS V++  + VL+NP  F +P++FEI++ECL
Sbjct: 1   MSIVSLLGIKVLNNPAKFTDPYEFEITFECL 31



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>ETV5_HUMAN (P41161) ETS translocation variant 5 (Ets-related protein ERM)|
          Length = 510

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 109 GGAGQPHRLPQPLPVRDLLRVPRP 180
           G A  PH LP+P P +    VPRP
Sbjct: 173 GPAPAPHSLPEPGPQQQTFAVPRP 196



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>K6PF_HAECO (Q27665) 6-phosphofructokinase (EC 2.7.1.11) (Phosphofructokinase)|
           (Phosphohexokinase)
          Length = 789

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +2

Query: 29  SPSCVD*RERPGRRKAA-AMSAVNITNVAVLDNPTAFLNPFQFEISYECLV 178
           S  C D R+R GR KAA  +    ITN+ V+    + +   QF   +  LV
Sbjct: 102 SARCTDLRQREGRMKAAYNLIEKGITNLVVIGGDGSLIGANQFRKDWPGLV 152


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,201,623
Number of Sequences: 219361
Number of extensions: 209086
Number of successful extensions: 831
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 80,573,946
effective HSP length: 35
effective length of database: 72,896,311
effective search space used: 1749511464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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