| Clone Name | bags36d23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009491.1| Triticum aestivum clone wr1.pk0067.h2:fis, full insert mRNA sequence Length = 1617 Score = 702 bits (354), Expect = 0.0 Identities = 429/454 (94%) Strand = Plus / Plus Query: 82 gccgccgcctacccgctgcccaagaccaagatcacgctcgagacgctcagggacttcgtc 141 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7 gccgccgcctacccgctgcccaagaccaagatcacgctcgagacgctcagggacttcgtc 66 Query: 142 cacctacgcgcacgcaccaacacgataggcgcgattgctcggataaggcaccagcttgcc 201 ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 67 cacctccgcgcacgcaccaacacgataggcgcagttgctcggataaggcaccagcttgcc 126 Query: 202 tacgcaacacacagttttttcgatgaaaatggatttttgtatatccacacacccataata 261 |||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 127 tacgcaacccacagttttttcgatgaaaatggatttttgtatattcacacccccataata 186 Query: 262 accaccagcgattgtgagggtgcaggtgagatgttccaagtcacagccttattcagccag 321 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 187 accaccagcgactgtgagggtgcaggtgagatgttccaagtcactgccttattcagccag 246 Query: 322 gctgaaaaggtggagaaggagcttaaggagaaccctgcaccatcagaagctgacattgag 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 247 gctgaaaaggtggagaaggagcttaaggagaaccctgcaccatcagaagctgacgttgag 306 Query: 382 gctgctaagattgttgttaaagagaaaggggatgcagtagcacaacttaaagcagcaaaa 441 ||||||||| ||||||||||||||||||| |||||||| || ||| | |||||||||||| Sbjct: 307 gctgctaagcttgttgttaaagagaaaggagatgcagttgctcaattgaaagcagcaaaa 366 Query: 442 gctagcaagcaagagataactgctgctgtttttgagcttcaaaaggctaaagagaatgtg 501 ||||||||||||||||||||||||||||||| | |||| ||| ||||||||||||||| Sbjct: 367 gctagcaagcaagagataactgctgctgtttccgtgcttacaaaagctaaagagaatgtg 426 Query: 502 tcgagggtggaagagaggtctaagttgaaacctg 535 | |||||||||||| | |||||||||||||||| Sbjct: 427 ttaagggtggaagagcgctctaagttgaaacctg 460
>ref|NM_193854.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1680 Score = 319 bits (161), Expect = 5e-84 Identities = 395/473 (83%) Strand = Plus / Plus Query: 58 gtcatcgagctcggggaggtggacgccgccgcctacccgctgcccaagaccaagatcacg 117 ||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||| ||||| Sbjct: 355 gtcatcgaggtcggcgaggtcgaccccgccgcctacccgctgcccaagaccaagctcacg 414 Query: 118 ctcgagacgctcagggacttcgtccacctacgcgcacgcaccaacacgataggcgcgatt 177 ||||||| ||||||||| ||||||| || ||| | |||||||||||||| || || || Sbjct: 415 ctcgagaatctcagggacgtcgtccatctccgctcccgcaccaacacgattggtgctgtt 474 Query: 178 gctcggataaggcaccagcttgcctacgcaacacacagttttttcgatgaaaatggattt 237 || || || || |||||||| |||| ||||||||||| ||||| ||||| ||||| ||| Sbjct: 475 gcgcgtattagacaccagctagcctgtgcaacacacaggttttttgatgagaatggtttt 534 Query: 238 ttgtatatccacacacccataataaccaccagcgattgtgagggtgcaggtgagatgttc 297 | ||| | |||||||| |||||||| || || |||||||||||||| ||||||||||| Sbjct: 535 ctttatgtgcacacaccaataataactacaagtgattgtgagggtgctggtgagatgttt 594 Query: 298 caagtcacagccttattcagccaggctgaaaaggtggagaaggagcttaaggagaaccct 357 ||||| || | || |||||||| |||||||||||||||||||| | || ||||||||| Sbjct: 595 caagtgacgactttgttcagccatgctgaaaaggtggagaaggaattgaaagagaaccct 654 Query: 358 gcaccatcagaagctgacattgaggctgctaagattgttgttaaagagaaaggggatgca 417 ||||||||||| |||| |||||||| |||| ||||||| || || ||||| ||||| Sbjct: 655 gcaccatcagagtctgatattgaggcagctagagttgttgtcaaggaaaaaggtgatgcg 714 Query: 418 gtagcacaacttaaagcagcaaaagctagcaagcaagagataactgctgctgtttttgag 477 || ||||| |||||||| |||||||||||||| ||||| || || ||||||||| |||| Sbjct: 715 gttgcacagcttaaagctgcaaaagctagcaaacaagaaatcacagctgctgttgctgag 774 Query: 478 cttcaaaaggctaaagagaatgtgtcgagggtggaagagaggtctaagttgaa 530 ||| | ||||| ||||| ||||| || ||| |||| || || ||||||||||| Sbjct: 775 cttaacaaggcaaaagaaaatgtctcaaggctggaggaaagatctaagttgaa 827
>dbj|AK101893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070O21, full insert sequence Length = 2115 Score = 311 bits (157), Expect = 1e-81 Identities = 394/473 (83%) Strand = Plus / Plus Query: 58 gtcatcgagctcggggaggtggacgccgccgcctacccgctgcccaagaccaagatcacg 117 ||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||| ||||| Sbjct: 507 gtcatcgaggtcggcgaggtcgaccccgccgcctacccgctgcccaagaccaagctcacg 566 Query: 118 ctcgagacgctcagggacttcgtccacctacgcgcacgcaccaacacgataggcgcgatt 177 ||||||| ||||||| | ||||||| || ||| | |||||||||||||| || || || Sbjct: 567 ctcgagaatctcaggggcgtcgtccatctccgctcccgcaccaacacgattggtgctgtt 626 Query: 178 gctcggataaggcaccagcttgcctacgcaacacacagttttttcgatgaaaatggattt 237 || || || || |||||||| |||| ||||||||||| ||||| ||||| ||||| ||| Sbjct: 627 gcgcgtattagacaccagctagcctgtgcaacacacaggttttttgatgagaatggtttt 686 Query: 238 ttgtatatccacacacccataataaccaccagcgattgtgagggtgcaggtgagatgttc 297 | ||| | |||||||| |||||||| || || |||||||||||||| ||||||||||| Sbjct: 687 ctttatgtgcacacaccaataataactacaagtgattgtgagggtgctggtgagatgttt 746 Query: 298 caagtcacagccttattcagccaggctgaaaaggtggagaaggagcttaaggagaaccct 357 ||||| || | || |||||||| |||||||||||||||||||| | || ||||||||| Sbjct: 747 caagtgacgactttgttcagccatgctgaaaaggtggagaaggaattgaaagagaaccct 806 Query: 358 gcaccatcagaagctgacattgaggctgctaagattgttgttaaagagaaaggggatgca 417 ||||||||||| |||| |||||||| |||| ||||||| || || ||||| ||||| Sbjct: 807 gcaccatcagagtctgatattgaggcagctagagttgttgtcaaggaaaaaggtgatgcg 866 Query: 418 gtagcacaacttaaagcagcaaaagctagcaagcaagagataactgctgctgtttttgag 477 || ||||| |||||||| |||||||||||||| ||||| || || ||||||||| |||| Sbjct: 867 gttgcacagcttaaagctgcaaaagctagcaaacaagaaatcacagctgctgttgctgag 926 Query: 478 cttcaaaaggctaaagagaatgtgtcgagggtggaagagaggtctaagttgaa 530 ||| | ||||| ||||| ||||| || ||| |||| || || ||||||||||| Sbjct: 927 cttaacaaggcaaaagaaaatgtctcaaggctggaggaaagatctaagttgaa 979
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 216 bits (109), Expect = 6e-53 Identities = 283/341 (82%) Strand = Plus / Minus Query: 190 caccagcttgcctacgcaacacacagttttttcgatgaaaatggatttttgtatatccac 249 |||||||| |||| ||||||||||| ||||| ||||| ||||| ||| | ||| | ||| Sbjct: 15341201 caccagctagcctgtgcaacacacaggttttttgatgagaatggttttctttatgtgcac 15341142 Query: 250 acacccataataaccaccagcgattgtgagggtgcaggtgagatgttccaagtcacagcc 309 ||||| |||||||| || || |||||||||||||| ||||||||||| ||||| || | Sbjct: 15341141 acaccaataataactacaagtgattgtgagggtgctggtgagatgtttcaagtgacgact 15341082 Query: 310 ttattcagccaggctgaaaaggtggagaaggagcttaaggagaaccctgcaccatcagaa 369 || |||||||| |||||||||||||||||||| | || |||||||||||||||||||| Sbjct: 15341081 ttgttcagccatgctgaaaaggtggagaaggaattgaaagagaaccctgcaccatcagag 15341022 Query: 370 gctgacattgaggctgctaagattgttgttaaagagaaaggggatgcagtagcacaactt 429 |||| |||||||| |||| ||||||| || || ||||| ||||| || ||||| ||| Sbjct: 15341021 tctgatattgaggcagctagagttgttgtcaaggaaaaaggtgatgcggttgcacagctt 15340962 Query: 430 aaagcagcaaaagctagcaagcaagagataactgctgctgtttttgagcttcaaaaggct 489 ||||| |||||||||||||| ||||| || || ||||||||| ||||||| | ||||| Sbjct: 15340961 aaagctgcaaaagctagcaaacaagaaatcacagctgctgttgctgagcttaacaaggca 15340902 Query: 490 aaagagaatgtgtcgagggtggaagagaggtctaagttgaa 530 ||||| ||||| || ||| |||| || || ||||||||||| Sbjct: 15340901 aaagaaaatgtctcaaggctggaggaaagatctaagttgaa 15340861 Score = 119 bits (60), Expect = 1e-23 Identities = 96/108 (88%) Strand = Plus / Minus Query: 58 gtcatcgagctcggggaggtggacgccgccgcctacccgctgcccaagaccaagatcacg 117 ||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||| ||||| Sbjct: 15342157 gtcatcgaggtcggcgaggtcgaccccgccgcctacccgctgcccaagaccaagctcacg 15342098 Query: 118 ctcgagacgctcagggacttcgtccacctacgcgcacgcaccaacacg 165 ||||||| ||||||||| ||||||| || ||| | |||||||||||| Sbjct: 15342097 ctcgagaatctcagggacgtcgtccatctccgctcccgcaccaacacg 15342050 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 63 cgagctcggggaggtggacgccgccgcc 90 |||||||| ||||||||||||||||||| Sbjct: 29675974 cgagctcgaggaggtggacgccgccgcc 29676001
>dbj|AP003199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1045D11 Length = 142320 Score = 216 bits (109), Expect = 6e-53 Identities = 283/341 (82%) Strand = Plus / Minus Query: 190 caccagcttgcctacgcaacacacagttttttcgatgaaaatggatttttgtatatccac 249 |||||||| |||| ||||||||||| ||||| ||||| ||||| ||| | ||| | ||| Sbjct: 18742 caccagctagcctgtgcaacacacaggttttttgatgagaatggttttctttatgtgcac 18683 Query: 250 acacccataataaccaccagcgattgtgagggtgcaggtgagatgttccaagtcacagcc 309 ||||| |||||||| || || |||||||||||||| ||||||||||| ||||| || | Sbjct: 18682 acaccaataataactacaagtgattgtgagggtgctggtgagatgtttcaagtgacgact 18623 Query: 310 ttattcagccaggctgaaaaggtggagaaggagcttaaggagaaccctgcaccatcagaa 369 || |||||||| |||||||||||||||||||| | || |||||||||||||||||||| Sbjct: 18622 ttgttcagccatgctgaaaaggtggagaaggaattgaaagagaaccctgcaccatcagag 18563 Query: 370 gctgacattgaggctgctaagattgttgttaaagagaaaggggatgcagtagcacaactt 429 |||| |||||||| |||| ||||||| || || ||||| ||||| || ||||| ||| Sbjct: 18562 tctgatattgaggcagctagagttgttgtcaaggaaaaaggtgatgcggttgcacagctt 18503 Query: 430 aaagcagcaaaagctagcaagcaagagataactgctgctgtttttgagcttcaaaaggct 489 ||||| |||||||||||||| ||||| || || ||||||||| ||||||| | ||||| Sbjct: 18502 aaagctgcaaaagctagcaaacaagaaatcacagctgctgttgctgagcttaacaaggca 18443 Query: 490 aaagagaatgtgtcgagggtggaagagaggtctaagttgaa 530 ||||| ||||| || ||| |||| || || ||||||||||| Sbjct: 18442 aaagaaaatgtctcaaggctggaggaaagatctaagttgaa 18402 Score = 119 bits (60), Expect = 1e-23 Identities = 96/108 (88%) Strand = Plus / Minus Query: 58 gtcatcgagctcggggaggtggacgccgccgcctacccgctgcccaagaccaagatcacg 117 ||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||| ||||| Sbjct: 19698 gtcatcgaggtcggcgaggtcgaccccgccgcctacccgctgcccaagaccaagctcacg 19639 Query: 118 ctcgagacgctcagggacttcgtccacctacgcgcacgcaccaacacg 165 ||||||| ||||||||| ||||||| || ||| | |||||||||||| Sbjct: 19638 ctcgagaatctcagggacgtcgtccatctccgctcccgcaccaacacg 19591
>dbj|AP003198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1039D07 Length = 135301 Score = 216 bits (109), Expect = 6e-53 Identities = 283/341 (82%) Strand = Plus / Minus Query: 190 caccagcttgcctacgcaacacacagttttttcgatgaaaatggatttttgtatatccac 249 |||||||| |||| ||||||||||| ||||| ||||| ||||| ||| | ||| | ||| Sbjct: 82560 caccagctagcctgtgcaacacacaggttttttgatgagaatggttttctttatgtgcac 82501 Query: 250 acacccataataaccaccagcgattgtgagggtgcaggtgagatgttccaagtcacagcc 309 ||||| |||||||| || || |||||||||||||| ||||||||||| ||||| || | Sbjct: 82500 acaccaataataactacaagtgattgtgagggtgctggtgagatgtttcaagtgacgact 82441 Query: 310 ttattcagccaggctgaaaaggtggagaaggagcttaaggagaaccctgcaccatcagaa 369 || |||||||| |||||||||||||||||||| | || |||||||||||||||||||| Sbjct: 82440 ttgttcagccatgctgaaaaggtggagaaggaattgaaagagaaccctgcaccatcagag 82381 Query: 370 gctgacattgaggctgctaagattgttgttaaagagaaaggggatgcagtagcacaactt 429 |||| |||||||| |||| ||||||| || || ||||| ||||| || ||||| ||| Sbjct: 82380 tctgatattgaggcagctagagttgttgtcaaggaaaaaggtgatgcggttgcacagctt 82321 Query: 430 aaagcagcaaaagctagcaagcaagagataactgctgctgtttttgagcttcaaaaggct 489 ||||| |||||||||||||| ||||| || || ||||||||| ||||||| | ||||| Sbjct: 82320 aaagctgcaaaagctagcaaacaagaaatcacagctgctgttgctgagcttaacaaggca 82261 Query: 490 aaagagaatgtgtcgagggtggaagagaggtctaagttgaa 530 ||||| ||||| || ||| |||| || || ||||||||||| Sbjct: 82260 aaagaaaatgtctcaaggctggaggaaagatctaagttgaa 82220 Score = 119 bits (60), Expect = 1e-23 Identities = 96/108 (88%) Strand = Plus / Minus Query: 58 gtcatcgagctcggggaggtggacgccgccgcctacccgctgcccaagaccaagatcacg 117 ||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||| ||||| Sbjct: 83516 gtcatcgaggtcggcgaggtcgaccccgccgcctacccgctgcccaagaccaagctcacg 83457 Query: 118 ctcgagacgctcagggacttcgtccacctacgcgcacgcaccaacacg 165 ||||||| ||||||||| ||||||| || ||| | |||||||||||| Sbjct: 83456 ctcgagaatctcagggacgtcgtccatctccgctcccgcaccaacacg 83409
>gb|BT018795.1| Zea mays clone EL01N0528A03.d mRNA sequence Length = 1941 Score = 125 bits (63), Expect = 2e-25 Identities = 314/398 (78%), Gaps = 6/398 (1%) Strand = Plus / Minus Query: 68 tcggggaggtggacgccgccgcctacccgctgcccaagaccaag------atcacgctcg 121 |||| ||||| || ||||||| |||||||||||||||| |||| ||||||||| Sbjct: 1503 tcggcgaggtcgatgccgccgtctacccgctgcccaagggcaaggtcaaactcacgctcg 1444 Query: 122 agacgctcagggacttcgtccacctacgcgcacgcaccaacacgataggcgcgattgctc 181 ||| |||||||||| |||| || || || | |||||||||||||| || ||| ||||| Sbjct: 1443 agaagctcagggacgtcgttcatctccgttcgcgcaccaacacgattggagcggttgcta 1384 Query: 182 ggataaggcaccagcttgcctacgcaacacacagttttttcgatgaaaatggatttttgt 241 |||| ||||||||| | ||||| ||| ||||||| || || ||||| ||||||||| | | Sbjct: 1383 ggattaggcaccagttagcctatgcatcacacaggttctttgatgagaatggatttctct 1324 Query: 242 atatccacacacccataataaccaccagcgattgtgagggtgcaggtgagatgttccaag 301 || | || ||||| |||||||| || || || ||||| ||||| ||||||||||| |||| Sbjct: 1323 atgtacatacaccaataataactacgagtgactgtgaaggtgctggtgagatgtttcaag 1264 Query: 302 tcacagccttattcagccaggctgaaaaggtggagaaggagcttaaggagaaccctgcac 361 | ||| | ||||| ||||||||||| || |||||||| | | |||||||| || Sbjct: 1263 tgacaactttatttagccaggctgagaaaactgagaaggaattgagagagaacccaaaac 1204 Query: 362 catcagaagctgacattgaggctgctaagattgttgttaaagagaaaggggatgcagtag 421 | || || |||| |||||||| ||||| || |||| || || ||||| |||| || | Sbjct: 1203 cttctgattctgaaattgaggcagctaaagttcttgtcaaggaaaaaggtgatgtggtcg 1144 Query: 422 cacaacttaaagcagcaaaagctagcaagcaagagata 459 |||| |||||||| |||||||| ||||| ||||||||| Sbjct: 1143 cacagcttaaagctgcaaaagccagcaaacaagagata 1106
>gb|AY105512.1| Zea mays PCO123869 mRNA sequence Length = 2025 Score = 125 bits (63), Expect = 2e-25 Identities = 314/398 (78%), Gaps = 6/398 (1%) Strand = Plus / Plus Query: 68 tcggggaggtggacgccgccgcctacccgctgcccaagaccaag------atcacgctcg 121 |||| ||||| || ||||||| |||||||||||||||| |||| ||||||||| Sbjct: 498 tcggcgaggtcgatgccgccgtctacccgctgcccaagggcaaggtcaaactcacgctcg 557 Query: 122 agacgctcagggacttcgtccacctacgcgcacgcaccaacacgataggcgcgattgctc 181 ||| |||||||||| |||| || || || | |||||||||||||| || ||| ||||| Sbjct: 558 agaagctcagggacgtcgttcatctccgttcgcgcaccaacacgattggagcggttgcta 617 Query: 182 ggataaggcaccagcttgcctacgcaacacacagttttttcgatgaaaatggatttttgt 241 |||| ||||||||| | ||||| ||| ||||||| || || ||||| ||||||||| | | Sbjct: 618 ggattaggcaccagttagcctatgcatcacacaggttctttgatgagaatggatttctct 677 Query: 242 atatccacacacccataataaccaccagcgattgtgagggtgcaggtgagatgttccaag 301 || | || ||||| |||||||| || || || ||||| ||||| ||||||||||| |||| Sbjct: 678 atgtacatacaccaataataactacgagtgactgtgaaggtgctggtgagatgtttcaag 737 Query: 302 tcacagccttattcagccaggctgaaaaggtggagaaggagcttaaggagaaccctgcac 361 | ||| | ||||| ||||||||||| || |||||||| | | |||||||| || Sbjct: 738 tgacaactttatttagccaggctgagaaaactgagaaggaattgagagagaacccaaaac 797 Query: 362 catcagaagctgacattgaggctgctaagattgttgttaaagagaaaggggatgcagtag 421 | || || |||| |||||||| ||||| || |||| || || ||||| |||| || | Sbjct: 798 cttctgattctgaaattgaggcagctaaagttcttgtcaaggaaaaaggtgatgtggtcg 857 Query: 422 cacaacttaaagcagcaaaagctagcaagcaagagata 459 |||| |||||||| |||||||| ||||| ||||||||| Sbjct: 858 cacagcttaaagctgcaaaagccagcaaacaagagata 895
>gb|BT014240.1| Lycopersicon esculentum clone 133440F, mRNA sequence Length = 2082 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 241 tatatccacacacccataataaccaccagcgattgtgagggtgcaggtgagatgttccaa 300 ||||||||||| || ||||| || || || |||||||||||||| ||||||||||||||| Sbjct: 644 tatatccacaccccaataatcacaacaagtgattgtgagggtgctggtgagatgttccaa 703 Query: 301 gt 302 || Sbjct: 704 gt 705 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 322 gctgaaaaggtggagaaggagcttaaggagaaccctgcaccatcagaagctgaca 376 ||||||||| ||||||||||||| || ||||| ||||| || |||||| |||||| Sbjct: 725 gctgaaaagttggagaaggagctgaaagagaatcctgctccttcagaatctgaca 779
>emb|CR318644.8| Zebrafish DNA sequence from clone DKEYP-11H3 in linkage group 23, complete sequence Length = 92984 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgagatgt 295 ||||||||||||||||||||||||| Sbjct: 78552 gattgtgagggtgcaggtgagatgt 78528
>emb|BX927365.7| Zebrafish DNA sequence from clone DKEY-161P7 in linkage group 23, complete sequence Length = 229608 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 271 gattgtgagggtgcaggtgagatgt 295 ||||||||||||||||||||||||| Sbjct: 207731 gattgtgagggtgcaggtgagatgt 207755
>emb|CR855258.6| Zebrafish DNA sequence from clone DKEY-2N12 in linkage group 5, complete sequence Length = 141618 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgagatgt 295 ||||||||||||||||||||||||| Sbjct: 106095 gattgtgagggtgcaggtgagatgt 106071
>emb|BX470169.7| Zebrafish DNA sequence from clone DKEY-31P8 in linkage group 7, complete sequence Length = 222405 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 271 gattgtgagggtgcaggtgagatgt 295 ||||||||||||||||||||||||| Sbjct: 2329 gattgtgagggtgcaggtgagatgt 2353
>emb|BX324171.9| Zebrafish DNA sequence from clone DKEYP-57C9 in linkage group 5, complete sequence Length = 151068 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgagatgt 295 ||||||||||||||||||||||||| Sbjct: 80525 gattgtgagggtgcaggtgagatgt 80501
>emb|BX296533.9| Zebrafish DNA sequence from clone DKEY-54O1 in linkage group 5, complete sequence Length = 200047 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgagatgt 295 ||||||||||||||||||||||||| Sbjct: 189346 gattgtgagggtgcaggtgagatgt 189322
>emb|CR855328.8| Zebrafish DNA sequence from clone CH211-207D6 in linkage group 2, complete sequence Length = 152638 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgagatgt 295 ||||||||||||||||||||||||| Sbjct: 144484 gattgtgagggtgcaggtgagatgt 144460
>ref|NM_191735.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3462 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 63 cgagctcggggaggtggacgccgccgcc 90 |||||||| ||||||||||||||||||| Sbjct: 294 cgagctcgaggaggtggacgccgccgcc 267
>emb|BX465203.6| Zebrafish DNA sequence from clone CH211-221F10 in linkage group 14, complete sequence Length = 150992 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 272 attgtgagggtgcaggtgagatgt 295 |||||||||||||||||||||||| Sbjct: 87260 attgtgagggtgcaggtgagatgt 87283
>dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131B07 Length = 109135 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 63 cgagctcggggaggtggacgccgccgcc 90 |||||||| ||||||||||||||||||| Sbjct: 5705 cgagctcgaggaggtggacgccgccgcc 5732
>dbj|AP003410.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1142C05 Length = 151457 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 63 cgagctcggggaggtggacgccgccgcc 90 |||||||| ||||||||||||||||||| Sbjct: 145794 cgagctcgaggaggtggacgccgccgcc 145821
>gb|AC147007.17| Medicago truncatula clone mth2-26c3, complete sequence Length = 122770 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 492 agagaatgtgtcgagggtggaag 514 ||||||||||||||||||||||| Sbjct: 93348 agagaatgtgtcgagggtggaag 93370
>emb|CR407547.14| Zebrafish DNA sequence from clone DKEY-62A12 in linkage group 9, complete sequence Length = 204067 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgaga 292 |||||||||||||||||||||| Sbjct: 8953 gattgtgagggtgcaggtgaga 8932
>emb|BX571794.22| Zebrafish DNA sequence from clone DKEY-246M18 in linkage group 15, complete sequence Length = 177616 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgaga 292 |||||||||||||||||||||| Sbjct: 112936 gattgtgagggtgcaggtgaga 112915
>emb|BX928758.9| Zebrafish DNA sequence from clone DKEY-206M15 in linkage group 25, complete sequence Length = 199974 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 gattgtgagggtgcaggtgaga 292 |||||||||||||||||||||| Sbjct: 135122 gattgtgagggtgcaggtgaga 135143
>emb|CR932397.9| Zebrafish DNA sequence from clone CH211-123E19 in linkage group 13, complete sequence Length = 173825 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 gattgtgagggtgcaggtgaga 292 |||||||||||||||||||||| Sbjct: 118975 gattgtgagggtgcaggtgaga 118996
>emb|BX510332.10| Zebrafish DNA sequence from clone CH211-225M7, complete sequence Length = 171212 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgagatgtt 296 ||||||||||| |||||||||||||| Sbjct: 80060 gattgtgagggcgcaggtgagatgtt 80035
>emb|BX293994.28| Zebrafish DNA sequence from clone DKEY-256K14 in linkage group 10, complete sequence Length = 210640 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgaga 292 |||||||||||||||||||||| Sbjct: 22435 gattgtgagggtgcaggtgaga 22414
>emb|BX324162.8| Zebrafish DNA sequence from clone DKEY-95O3 in linkage group 15, complete sequence Length = 155540 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 gattgtgagggtgcaggtgaga 292 |||||||||||||||||||||| Sbjct: 135392 gattgtgagggtgcaggtgaga 135413
>emb|BX897687.7| Zebrafish DNA sequence from clone DKEY-151O8, complete sequence Length = 208227 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 gattgtgagggtgcaggtgaga 292 |||||||||||||||||||||| Sbjct: 183012 gattgtgagggtgcaggtgaga 183033
>emb|BX323548.11| Zebrafish DNA sequence from clone DKEY-31D5 in linkage group 11, complete sequence Length = 229237 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 gattgtgagggtgcaggtgaga 292 |||||||||||||||||||||| Sbjct: 183891 gattgtgagggtgcaggtgaga 183912
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 69 cggggaggtggacgccgccgcctacccgct 98 ||||| ||||| |||||||||||||||||| Sbjct: 1921915 cggggcggtggtcgccgccgcctacccgct 1921944
>emb|AL929326.9| Zebrafish DNA sequence from clone BUSM1-SL11 in linkage group 20, complete sequence Length = 137700 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 gattgtgagggtgcaggtgaga 292 |||||||||||||||||||||| Sbjct: 62914 gattgtgagggtgcaggtgaga 62935
>emb|AL807818.14| Zebrafish DNA sequence from clone CH211-225H24, complete sequence Length = 194425 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 gattgtgagggtgcaggtgaga 292 |||||||||||||||||||||| Sbjct: 65982 gattgtgagggtgcaggtgaga 66003
>ref|NM_105766.2| Arabidopsis thaliana SYNC1; ATP binding / asparagine-tRNA ligase/ aspartate-tRNA ligase/ nucleic acid binding / tRNA ligase AT1G70980 (SYNC1) mRNA, complete cds Length = 1945 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 271 gattgtgagggtgcaggtgagatgttccaagtcacagcctt 311 |||||||| ||||| ||||| ||||||||||| ||| |||| Sbjct: 595 gattgtgaaggtgctggtgaaatgttccaagtgacaacctt 635
>emb|BX936299.14| Zebrafish DNA sequence from clone CH211-2I17 in linkage group 1, complete sequence Length = 132306 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 gattgtgagggtgcaggtgagatgt 295 |||||||||||||| |||||||||| Sbjct: 105897 gattgtgagggtgcgggtgagatgt 105921
>emb|CR628341.13| Zebrafish DNA sequence from clone DKEY-29G22 in linkage group 6, complete sequence Length = 246165 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgagatgt 295 ||||||||||| ||||||||||||| Sbjct: 146704 gattgtgagggcgcaggtgagatgt 146680
>emb|CR847563.12| Zebrafish DNA sequence from clone CH211-202H14 in linkage group 11, complete sequence Length = 204337 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 gattgtgagggtgcaggtgagatgt 295 ||||||||||||||||||| ||||| Sbjct: 129996 gattgtgagggtgcaggtgggatgt 130020
>ref|XM_760221.1| Theileria parva strain Muguga asparaginyl-tRNA synthetase (TP02_0746) partial mRNA Length = 2370 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 271 gattgtgagggtgcaggtgagatgttcca 299 |||||||| |||||||||||| ||||||| Sbjct: 1171 gattgtgaaggtgcaggtgagttgttcca 1199
>gb|U20864.1| Caenorhabditis elegans cosmid F32A5, complete sequence Length = 38731 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 215 gttttttcgatgaaaatggattttt 239 ||||| ||||||||||||||||||| Sbjct: 9200 gttttatcgatgaaaatggattttt 9224 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 216 ttttttcgatgaaaatggattttt 239 |||| ||||||||||||||||||| Sbjct: 10100 ttttatcgatgaaaatggattttt 10077
>emb|CR388029.10| Zebrafish DNA sequence from clone CH211-214O13 in linkage group 14, complete sequence Length = 210704 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 gattgtgagggtgcaggtgagatgt 295 |||||||||||||||| |||||||| Sbjct: 165768 gattgtgagggtgcagatgagatgt 165792
>emb|CR847859.13| Zebrafish DNA sequence from clone DKEYP-2F4 in linkage group 14, complete sequence Length = 124837 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgagatgt 295 |||||||||||||||| |||||||| Sbjct: 94139 gattgtgagggtgcagatgagatgt 94115
>emb|CR381633.6| Zebrafish DNA sequence from clone CH211-230M9 in linkage group 14, complete sequence Length = 163910 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 gattgtgagggtgcaggtgagatgt 295 ||||| ||||||||||||||||||| Sbjct: 128462 gattgcgagggtgcaggtgagatgt 128486
>emb|CR352288.9| Zebrafish DNA sequence from clone CH211-123P18 in linkage group 16, complete sequence Length = 103979 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 272 attgtgagggtgcaggtgaga 292 ||||||||||||||||||||| Sbjct: 73632 attgtgagggtgcaggtgaga 73652
>emb|CR293530.22| Zebrafish DNA sequence from clone CH211-129C13 in linkage group 1, complete sequence Length = 179015 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgagatgt 295 ||||||||||| ||||||||||||| Sbjct: 164511 gattgtgagggcgcaggtgagatgt 164487
>emb|BX927355.6| Zebrafish DNA sequence from clone CH211-129L20 in linkage group 1, complete sequence Length = 75717 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgagatgt 295 |||||||||||||| |||||||||| Sbjct: 26060 gattgtgagggtgcgggtgagatgt 26036
>emb|CR847800.4| Zebrafish DNA sequence from clone DKEY-182M5 in linkage group 14, complete sequence Length = 187193 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 gattgtgagggtgcaggtgagatgt 295 |||||||||||||||||||| |||| Sbjct: 173031 gattgtgagggtgcaggtgaaatgt 173055
>emb|BX629340.6| Zebrafish DNA sequence from clone DKEY-183O11 in linkage group 9, complete sequence Length = 172090 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgagatgt 295 ||||||||||| ||||||||||||| Sbjct: 15900 gattgtgagggcgcaggtgagatgt 15876
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome Length = 2839318 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 270 cgattgtgagggtgcaggtgagatgttcc 298 ||||||||| ||||| ||||||||||||| Sbjct: 1428085 cgattgtgaaggtgccggtgagatgttcc 1428113
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 agcaaaagctagcaagcaaga 455 ||||||||||||||||||||| Sbjct: 474797 agcaaaagctagcaagcaaga 474817
>emb|BX248498.5| Zebrafish DNA sequence from clone CH211-241P24, complete sequence Length = 171348 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgagatgt 295 ||||| ||||||||||||||||||| Sbjct: 71738 gattgcgagggtgcaggtgagatgt 71714
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 agcaaaagctagcaagcaaga 455 ||||||||||||||||||||| Sbjct: 76961 agcaaaagctagcaagcaaga 76981
>emb|BX649351.10| Zebrafish DNA sequence from clone CH211-168F19 in linkage group 4, complete sequence Length = 144569 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 gattgtgagggtgcaggtgagatgt 295 ||||||||||| ||||||||||||| Sbjct: 82512 gattgtgagggcgcaggtgagatgt 82536
>emb|AL954129.11| Zebrafish DNA sequence from clone CH211-200P22 in linkage group 24, complete sequence Length = 161275 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgagatgt 295 |||| |||||||||||||||||||| Sbjct: 93284 gattttgagggtgcaggtgagatgt 93260
>emb|AL807827.11| Zebrafish DNA sequence from clone CH211-220J6, complete sequence Length = 199141 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgagatgt 295 ||||||||||| ||||||||||||| Sbjct: 23901 gattgtgagggcgcaggtgagatgt 23877
>emb|AL929322.6| Zebrafish DNA sequence from clone DKEY-10H23, complete sequence Length = 220527 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 gattgtgagggtgcaggtgagatgt 295 |||||||||||||||||||| |||| Sbjct: 206691 gattgtgagggtgcaggtgaaatgt 206715
>emb|BX936455.9| Zebrafish DNA sequence from clone DKEY-199I12 in linkage group 20, complete sequence Length = 123707 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgagatgt 295 ||||||||||||||||| ||||||| Sbjct: 76612 gattgtgagggtgcaggagagatgt 76588
>emb|AL845306.9| Zebrafish DNA sequence from clone DKEY-217M5 in linkage group 20, complete sequence Length = 186675 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgagatgt 295 ||||||||||| ||||||||||||| Sbjct: 32924 gattgtgagggcgcaggtgagatgt 32900
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 agcaaaagctagcaagcaaga 455 ||||||||||||||||||||| Sbjct: 28709 agcaaaagctagcaagcaaga 28729
>emb|CR388007.7| Zebrafish DNA sequence from clone DKEY-22G9 in linkage group 6, complete sequence Length = 221983 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgagatgt 295 ||||||||||| ||||||||||||| Sbjct: 727 gattgtgagggcgcaggtgagatgt 703
>gb|AC008148.2|AC008148 Arabidopsis thaliana chromosome I BAC F15H11 genomic sequence, complete sequence Length = 110514 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 271 gattgtgagggtgcaggtgagatgttccaagtcacagcctt 311 |||||||| ||||| ||||| ||||||||||| ||| |||| Sbjct: 80533 gattgtgaaggtgctggtgaaatgttccaagtgacaacctt 80573
>emb|AL929533.12| Zebrafish DNA sequence from clone DKEY-18E17 in linkage group 5, complete sequence Length = 251370 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgagatgt 295 ||||||||||| ||||||||||||| Sbjct: 250794 gattgtgagggcgcaggtgagatgt 250770
>emb|BX323826.6| Zebrafish DNA sequence from clone CH211-57H10 in linkage group 5, complete sequence Length = 119262 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgagatgt 295 ||||||||||| ||||||||||||| Sbjct: 1424 gattgtgagggcgcaggtgagatgt 1400
>gb|AC147596.5| Gallus gallus BAC clone CH261-29A2 from chromosome unknown, complete sequence Length = 190789 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 gatgaaaatggatttttgtat 243 ||||||||||||||||||||| Sbjct: 103720 gatgaaaatggatttttgtat 103700
>emb|CR450825.5| Zebrafish DNA sequence from clone DKEY-117B24 in linkage group 11, complete sequence Length = 90653 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 gattgtgagggtgcaggtgagatgt 295 ||||||||||| ||||||||||||| Sbjct: 14715 gattgtgagggcgcaggtgagatgt 14739
>gb|AY375303.1| Streptococcus suis putative RNA methyltransferase gene, partial cds; putative penicillin binding protein 5 gene, complete cds; and aro operon, complete sequence Length = 8369 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tttttgagcttcaaaaggct 489 |||||||||||||||||||| Sbjct: 7741 tttttgagcttcaaaaggct 7760
>gb|BC076182.1| Danio rerio zgc:92702, mRNA (cDNA clone MGC:92702 IMAGE:7075044), complete cds Length = 868 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 ctgctgctgtttttgagctt 480 |||||||||||||||||||| Sbjct: 787 ctgctgctgtttttgagctt 768
>ref|XM_457979.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C07601g) partial mRNA Length = 4746 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 gagaaggagcttaaggagaa 353 |||||||||||||||||||| Sbjct: 3796 gagaaggagcttaaggagaa 3815
>gb|AC127224.3| Mus musculus BAC clone RP24-498F21 from chromosome 10, complete sequence Length = 162143 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ggctgaaaaggtggagaagg 340 |||||||||||||||||||| Sbjct: 28573 ggctgaaaaggtggagaagg 28592
>gb|AC107663.10| Mus musculus chromosome 13, clone RP23-99G9, complete sequence Length = 213163 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 aatgtgtcgagggtggaaga 515 |||||||||||||||||||| Sbjct: 21934 aatgtgtcgagggtggaaga 21953
>gb|AC121788.3| Mus musculus BAC clone RP23-395N2 from chromosome 10, complete sequence Length = 196144 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 ggctgaaaaggtggagaagg 340 |||||||||||||||||||| Sbjct: 30205 ggctgaaaaggtggagaagg 30186
>gb|AC073486.5| Homo sapiens BAC clone RP11-807H17 from 7, complete sequence Length = 162911 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 aaaatggatttttgtatatc 246 |||||||||||||||||||| Sbjct: 36516 aaaatggatttttgtatatc 36535
>gb|AY387077.1| Rattus norvegicus LRRGT00091 mRNA, complete cds Length = 831 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 atgttccaagtcacagcctt 311 |||||||||||||||||||| Sbjct: 401 atgttccaagtcacagcctt 382
>gb|AC144766.18| Medicago truncatula clone mth2-17c2, complete sequence Length = 92099 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 271 gattgtgagggtgcaggtgagatgttccaagt 302 |||||||||||||| ||||| ||||| ||||| Sbjct: 17072 gattgtgagggtgctggtgaaatgtttcaagt 17103
>gb|AC128638.34| Medicago truncatula clone mth2-36h10, complete sequence Length = 110895 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgagatgttccaagt 302 |||||||||||||| ||||| ||||| ||||| Sbjct: 60028 gattgtgagggtgctggtgaaatgtttcaagt 59997
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 gagaaggagcttaaggagaa 353 |||||||||||||||||||| Sbjct: 618133 gagaaggagcttaaggagaa 618152
>emb|BX927401.14| Zebrafish DNA sequence from clone CH211-210H11 in linkage group 19, complete sequence Length = 137958 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 ctgctgctgtttttgagctt 480 |||||||||||||||||||| Sbjct: 56614 ctgctgctgtttttgagctt 56633
>emb|CR381695.4| Zebrafish DNA sequence from clone CH211-265I20 in linkage group 14, complete sequence Length = 81999 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 attgtgagggtgcaggtgagatgt 295 |||||||||| ||||||||||||| Sbjct: 64439 attgtgagggcgcaggtgagatgt 64416
>ref|XM_688424.1| PREDICTED: Danio rerio similar to SUMO/sentrin specific protease family member 8 (predicted) (LOC565126), mRNA Length = 806 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 taactgctgctgtttttgag 477 |||||||||||||||||||| Sbjct: 48 taactgctgctgtttttgag 67
>gb|AC153139.5| Mus musculus BAC clone RP23-411M4 from chromosome 13, complete sequence Length = 192541 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 aatgtgtcgagggtggaaga 515 |||||||||||||||||||| Sbjct: 90190 aatgtgtcgagggtggaaga 90209
>emb|BX276122.23| Zebrafish DNA sequence from clone CH211-232H22, complete sequence Length = 186714 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 gattgtgagggtgcaggtga 290 |||||||||||||||||||| Sbjct: 121608 gattgtgagggtgcaggtga 121627
>gb|AC124172.4| Mus musculus BAC clone RP23-168P24 from chromosome 1, complete sequence Length = 192946 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 ctgaaaaggtggagaaggag 342 |||||||||||||||||||| Sbjct: 94934 ctgaaaaggtggagaaggag 94953
>gb|AC152505.2| Pan troglodytes BAC clone RP43-113N22 from chromosome 7, complete sequence Length = 219580 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 aaaatggatttttgtatatc 246 |||||||||||||||||||| Sbjct: 164109 aaaatggatttttgtatatc 164128
>ref|XM_217387.3| PREDICTED: Rattus norvegicus excision repair cross-complementing rodent repair deficiency,complementation group 5 (Ercc5), mRNA Length = 3468 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 tgctgctgtttttgagcttc 481 |||||||||||||||||||| Sbjct: 2261 tgctgctgtttttgagcttc 2242
>ref|XM_575182.1| PREDICTED: Rattus norvegicus similar to LRRGT00091 (LOC499843), mRNA Length = 831 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 atgttccaagtcacagcctt 311 |||||||||||||||||||| Sbjct: 401 atgttccaagtcacagcctt 382
>ref|NM_001002401.1| Danio rerio zgc:92702 (zgc:92702), mRNA Length = 868 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 ctgctgctgtttttgagctt 480 |||||||||||||||||||| Sbjct: 787 ctgctgctgtttttgagctt 768
>emb|AL845312.3| Zebrafish DNA sequence from clone DKEY-287F10, complete sequence Length = 174959 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 gattgtgagggtgcaggtga 290 |||||||||||||||||||| Sbjct: 113761 gattgtgagggtgcaggtga 113780
>emb|CR387997.18| Zebrafish DNA sequence from clone DKEY-13E3 in linkage group 4, complete sequence Length = 158108 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 attgtgagggtgcaggtgagatgt 295 |||||||||||||||| ||||||| Sbjct: 89461 attgtgagggtgcaggcgagatgt 89484
>emb|BX072563.7| Zebrafish DNA sequence from clone CH211-277G22 in linkage group 15, complete sequence Length = 170665 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtga 290 |||||||||||||||||||| Sbjct: 19861 gattgtgagggtgcaggtga 19842
>emb|AL929115.9| Zebrafish DNA sequence from clone CH211-146M13 in linkage group 7, complete sequence Length = 148315 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 taactgctgctgtttttgag 477 |||||||||||||||||||| Sbjct: 83797 taactgctgctgtttttgag 83778
>emb|AL935202.7| Zebrafish DNA sequence from clone CH211-197E11, complete sequence Length = 189096 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgagatg 294 ||||||||||| |||||||||||| Sbjct: 63194 gattgtgagggcgcaggtgagatg 63171
>emb|BX000472.8| Zebrafish DNA sequence from clone DKEY-77H17, complete sequence Length = 172174 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 gattgtgagggtgcaggtgagatg 294 ||||||||||| |||||||||||| Sbjct: 137429 gattgtgagggcgcaggtgagatg 137406
>emb|BX000481.5| Zebrafish DNA sequence from clone CH211-13A4 in linkage group 5, complete sequence Length = 163926 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 attgtgagggtgcaggtgagatgt 295 ||||||||||||||| |||||||| Sbjct: 21935 attgtgagggtgcagatgagatgt 21912
>emb|AL954699.4| Zebrafish DNA sequence from clone CH211-264H3 in linkage group 5, complete sequence Length = 143013 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 attgtgagggtgcaggtgagatgt 295 ||||||||||||||| |||||||| Sbjct: 23172 attgtgagggtgcagatgagatgt 23149
>gb|AC090159.12| Homo sapiens chromosome 11, clone RP11-406D1, complete sequence Length = 173557 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 gaaaaggtggagaaggagct 344 |||||||||||||||||||| Sbjct: 100860 gaaaaggtggagaaggagct 100879 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,706,980 Number of Sequences: 3902068 Number of extensions: 4706980 Number of successful extensions: 99609 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 95 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 99270 Number of HSP's gapped (non-prelim): 339 length of query: 535 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 512 effective length of database: 17,143,297,704 effective search space: 8777368424448 effective search space used: 8777368424448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)