ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags35o16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK069942.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 5e-47
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
3emb|AL928757.3|CNS08CBU Oryza sativa chromosome 12, . BAC OSJNBb... 127 4e-26
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 127 4e-26
5emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa... 127 4e-26
6ref|NM_115077.3| Arabidopsis thaliana unknown protein AT3G52170 ... 44 0.45
7gb|AY096650.1| Arabidopsis thaliana unknown protein (At3g52170) ... 44 0.45
8emb|AL132972.1|ATT25B15 Arabidopsis thaliana DNA chromosome 3, B... 44 0.45
9emb|AL049711.3|ATF4F15 Arabidopsis thaliana DNA chromosome 3, BA... 44 0.45
10emb|BX825084.1|CNS0A7VA Arabidopsis thaliana Full-length cDNA Co... 44 0.45
11ref|XM_474266.1| Oryza sativa (japonica cultivar-group), predic... 42 1.8
12ref|NM_183264.1| Mus musculus RIKEN cDNA 5830405N20 gene (583040... 42 1.8
13gb|AC161283.2| Pan troglodytes BAC clone CH251-354N8 from chromo... 42 1.8
14gb|AC004015.1| Homo sapiens BAC clone CTA-333F24 from 7, complet... 42 1.8
15emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4,... 42 1.8
16dbj|AK156313.1| Mus musculus activated spleen cDNA, RIKEN full-l... 42 1.8
17dbj|AK163027.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 42 1.8
18dbj|AK017900.1| Mus musculus adult male thymus cDNA, RIKEN full-... 42 1.8
19gb|AC159473.7| Mus musculus 10 BAC RP23-215E23 (Roswell Park Can... 42 1.8
20dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
21dbj|AK103595.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
22emb|AL732340.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 1.8
23gb|AC151775.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 7.1
24gb|AC147069.2| Pan troglodytes BAC clone RP43-165H20 from 7, com... 40 7.1
25gb|AC186168.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 7.1
26emb|AL954205.1| Pan troglodytes chromosome 22 clone RP43-046M07 ... 40 7.1
27emb|AL954202.1| Pan troglodytes chromosome 22 clone PTB-083P20 m... 40 7.1
28emb|AL034451.26|HS191E19 Human DNA sequence from clone RP1-191E1... 40 7.1
29emb|AL954204.1| Pan troglodytes chromosome 22 clone PTB-051G08 m... 40 7.1
30emb|AL954203.1| Pan troglodytes chromosome 22 clone RP43-019O24 ... 40 7.1
31gb|AC009220.10|AC009220 Homo sapiens chromosome 7 clone RP11-365... 40 7.1
32dbj|AP000035.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 7.1
33gb|AC018644.6|AC018644 Homo sapiens chromosome 7 clone RP11-383F... 40 7.1
34gb|AC006571.12|AC006571 Homo sapiens, clone hRPK.23_A_1, complet... 40 7.1
35dbj|AP001713.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 7.1
36emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 7.1
37dbj|AP000264.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 7.1
38dbj|AP000176.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 7.1
39dbj|AP000100.1| Homo sapiens genomic DNA of 21q22.1, GART and AM... 40 7.1 
>dbj|AK069942.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039O07, full
           insert sequence
          Length = 2150

 Score =  196 bits (99), Expect = 5e-47
 Identities = 210/247 (85%)
 Strand = Plus / Plus

                                                                       
Query: 261 gcaggagaagaagccacgggttaggaagactaaggaggagcggagggagatggttgagtc 320
           ||||||||||||||| ||||| |||||||| ||||||||| || |||||||||| |||||
Sbjct: 280 gcaggagaagaagccgcgggtgaggaagaccaaggaggagaggcgggagatggtcgagtc 339

                                                                       
Query: 321 cttcgttgacacgtatcgggtttcaaacagcgggaagtttccttcagtcaatcttacaca 380
           ||||||  |||| || |||||||||||    ||||| || |||||||||||||| || ||
Sbjct: 340 cttcgtcaacacttaccgggtttcaaatgatgggaaattcccttcagtcaatctcacgca 399

                                                                       
Query: 381 caaggaggttggaggatcatattatatagtccgtgagattatgagagatatcatccaaga 440
            ||||| || ||||| |||||||| ||||| ||||| ||  |||||||||||||||||||
Sbjct: 400 taaggaagtcggagggtcatattacatagttcgtgaaatcgtgagagatatcatccaaga 459

                                                                       
Query: 441 gaacagagttcttggccctggtgacttgaatgctaagacattgagttttgaggattgccc 500
           |||||| ||||| |||||||| | ||||||||| | | || |||||||||| || |||||
Sbjct: 460 gaacagggttctgggccctggcggcttgaatgccacggcactgagttttgaagactgccc 519

                  
Query: 501 tgattct 507
           |||||||
Sbjct: 520 tgattct 526



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 102 gaggaggatgcaggccaccgggagcg 127
           |||||||||||||||||| |||||||
Sbjct: 115 gaggaggatgcaggccacggggagcg 140
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  127 bits (64), Expect = 4e-26
 Identities = 133/156 (85%)
 Strand = Plus / Minus

                                                                            
Query: 352      gggaagtttccttcagtcaatcttacacacaaggaggttggaggatcatattatatagtc 411
                ||||| || |||||||||||||| || || ||||| || ||||| |||||||| ||||| 
Sbjct: 20855867 gggaaattcccttcagtcaatctcacgcataaggaagtcggagggtcatattacatagtt 20855808

                                                                            
Query: 412      cgtgagattatgagagatatcatccaagagaacagagttcttggccctggtgacttgaat 471
                ||||| ||  ||||||||||||||||||||||||| ||||| |||||||| | |||||||
Sbjct: 20855807 cgtgaaatcgtgagagatatcatccaagagaacagggttctgggccctggcggcttgaat 20855748

                                                    
Query: 472      gctaagacattgagttttgaggattgccctgattct 507
                || | | || |||||||||| || ||||||||||||
Sbjct: 20855747 gccacggcactgagttttgaagactgccctgattct 20855712



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                            
Query: 261      gcaggagaagaagccacgggttaggaagactaaggaggagcggagggagatggttgagtc 320
                ||||||||||||||| ||||| |||||||| ||||||||| || |||||||||| |||||
Sbjct: 20856355 gcaggagaagaagccgcgggtgaggaagaccaaggaggagaggcgggagatggtcgagtc 20856296

                               
Query: 321      cttcgttgacacgta 335
                ||||||  |||||||
Sbjct: 20856295 cttcgtcaacacgta 20856281



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 102      gaggaggatgcaggccaccgggagcg 127
                |||||||||||||||||| |||||||
Sbjct: 20856520 gaggaggatgcaggccacggggagcg 20856495
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>emb|AL928757.3|CNS08CBU Oryza sativa chromosome 12, . BAC OSJNBb0046O08 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 101075

 Score =  127 bits (64), Expect = 4e-26
 Identities = 133/156 (85%)
 Strand = Plus / Minus

                                                                         
Query: 352   gggaagtttccttcagtcaatcttacacacaaggaggttggaggatcatattatatagtc 411
             ||||| || |||||||||||||| || || ||||| || ||||| |||||||| ||||| 
Sbjct: 57597 gggaaattcccttcagtcaatctcacgcataaggaagtcggagggtcatattacatagtt 57538

                                                                         
Query: 412   cgtgagattatgagagatatcatccaagagaacagagttcttggccctggtgacttgaat 471
             ||||| ||  ||||||||||||||||||||||||| ||||| |||||||| | |||||||
Sbjct: 57537 cgtgaaatcgtgagagatatcatccaagagaacagggttctgggccctggcggcttgaat 57478

                                                 
Query: 472   gctaagacattgagttttgaggattgccctgattct 507
             || | | || |||||||||| || ||||||||||||
Sbjct: 57477 gccacggcactgagttttgaagactgccctgattct 57442



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                         
Query: 261   gcaggagaagaagccacgggttaggaagactaaggaggagcggagggagatggttgagtc 320
             ||||||||||||||| ||||| |||||||| ||||||||| || |||||||||| |||||
Sbjct: 58085 gcaggagaagaagccgcgggtgaggaagaccaaggaggagaggcgggagatggtcgagtc 58026

                            
Query: 321   cttcgttgacacgta 335
             ||||||  |||||||
Sbjct: 58025 cttcgtcaacacgta 58011



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 102   gaggaggatgcaggccaccgggagcg 127
             |||||||||||||||||| |||||||
Sbjct: 58250 gaggaggatgcaggccacggggagcg 58225
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  127 bits (64), Expect = 4e-26
 Identities = 133/156 (85%)
 Strand = Plus / Minus

                                                                            
Query: 352      gggaagtttccttcagtcaatcttacacacaaggaggttggaggatcatattatatagtc 411
                ||||| || |||||||||||||| || || ||||| || ||||| |||||||| ||||| 
Sbjct: 20782081 gggaaattcccttcagtcaatctcacgcataaggaagtcggagggtcatattacatagtt 20782022

                                                                            
Query: 412      cgtgagattatgagagatatcatccaagagaacagagttcttggccctggtgacttgaat 471
                ||||| ||  ||||||||||||||||||||||||| ||||| |||||||| | |||||||
Sbjct: 20782021 cgtgaaatcgtgagagatatcatccaagagaacagggttctgggccctggcggcttgaat 20781962

                                                    
Query: 472      gctaagacattgagttttgaggattgccctgattct 507
                || | | || |||||||||| || ||||||||||||
Sbjct: 20781961 gccacggcactgagttttgaagactgccctgattct 20781926



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                            
Query: 261      gcaggagaagaagccacgggttaggaagactaaggaggagcggagggagatggttgagtc 320
                ||||||||||||||| ||||| |||||||| ||||||||| || |||||||||| |||||
Sbjct: 20782569 gcaggagaagaagccgcgggtgaggaagaccaaggaggagaggcgggagatggtcgagtc 20782510

                               
Query: 321      cttcgttgacacgta 335
                ||||||  |||||||
Sbjct: 20782509 cttcgtcaacacgta 20782495



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 102      gaggaggatgcaggccaccgggagcg 127
                |||||||||||||||||| |||||||
Sbjct: 20782734 gaggaggatgcaggccacggggagcg 20782709
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>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 107819

 Score =  127 bits (64), Expect = 4e-26
 Identities = 133/156 (85%)
 Strand = Plus / Plus

                                                                          
Query: 352    gggaagtttccttcagtcaatcttacacacaaggaggttggaggatcatattatatagtc 411
              ||||| || |||||||||||||| || || ||||| || ||||| |||||||| ||||| 
Sbjct: 103128 gggaaattcccttcagtcaatctcacgcataaggaagtcggagggtcatattacatagtt 103187

                                                                          
Query: 412    cgtgagattatgagagatatcatccaagagaacagagttcttggccctggtgacttgaat 471
              ||||| ||  ||||||||||||||||||||||||| ||||| |||||||| | |||||||
Sbjct: 103188 cgtgaaatcgtgagagatatcatccaagagaacagggttctgggccctggcggcttgaat 103247

                                                  
Query: 472    gctaagacattgagttttgaggattgccctgattct 507
              || | | || |||||||||| || ||||||||||||
Sbjct: 103248 gccacggcactgagttttgaagactgccctgattct 103283



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                          
Query: 261    gcaggagaagaagccacgggttaggaagactaaggaggagcggagggagatggttgagtc 320
              ||||||||||||||| ||||| |||||||| ||||||||| || |||||||||| |||||
Sbjct: 102640 gcaggagaagaagccgcgggtgaggaagaccaaggaggagaggcgggagatggtcgagtc 102699

                             
Query: 321    cttcgttgacacgta 335
              ||||||  |||||||
Sbjct: 102700 cttcgtcaacacgta 102714



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 102    gaggaggatgcaggccaccgggagcg 127
              |||||||||||||||||| |||||||
Sbjct: 102475 gaggaggatgcaggccacggggagcg 102500
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>ref|NM_115077.3| Arabidopsis thaliana unknown protein AT3G52170 mRNA, complete cds
          Length = 1786

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 415 gagattatgagagatatcatccaagagaacagagttcttggccctggtgacttg 468
           |||||| | ||||| || |||||||| || ||||| ||||| ||||||||||||
Sbjct: 370 gagattgttagagagattatccaagaaaatagagtccttggtcctggtgacttg 423
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>gb|AY096650.1| Arabidopsis thaliana unknown protein (At3g52170) mRNA, complete cds
          Length = 1802

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 415 gagattatgagagatatcatccaagagaacagagttcttggccctggtgacttg 468
           |||||| | ||||| || |||||||| || ||||| ||||| ||||||||||||
Sbjct: 370 gagattgttagagagattatccaagaaaatagagtccttggtcctggtgacttg 423
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>emb|AL132972.1|ATT25B15 Arabidopsis thaliana DNA chromosome 3, BAC clone T25B15
          Length = 77350

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                  
Query: 415  gagattatgagagatatcatccaagagaacagagttcttggccctggtgacttg 468
            |||||| | ||||| || |||||||| || ||||| ||||| ||||||||||||
Sbjct: 2310 gagattgttagagagattatccaagaaaatagagtccttggtcctggtgacttg 2257
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>emb|AL049711.3|ATF4F15 Arabidopsis thaliana DNA chromosome 3, BAC clone F4F15
          Length = 123209

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                   
Query: 415   gagattatgagagatatcatccaagagaacagagttcttggccctggtgacttg 468
             |||||| | ||||| || |||||||| || ||||| ||||| ||||||||||||
Sbjct: 97832 gagattgttagagagattatccaagaaaatagagtccttggtcctggtgacttg 97779
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>emb|BX825084.1|CNS0A7VA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH95ZC08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1716

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 415 gagattatgagagatatcatccaagagaacagagttcttggccctggtgacttg 468
           |||||| ||||||| || || |||||||| ||||| | ||| ||||||||||||
Sbjct: 300 gagattgtgagagagattatgcaagagaagagagtgcgtggtcctggtgacttg 353
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>ref|XM_474266.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 726

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 193 tcgccgtcgtcttctgcttcc 213
           |||||||||||||||||||||
Sbjct: 194 tcgccgtcgtcttctgcttcc 214
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>ref|NM_183264.1| Mus musculus RIKEN cDNA 5830405N20 gene (5830405N20Rik), mRNA
          Length = 1428

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 493 gattgccctgattcttcagaa 513
           |||||||||||||||||||||
Sbjct: 152 gattgccctgattcttcagaa 132
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>gb|AC161283.2| Pan troglodytes BAC clone CH251-354N8 from chromosome 7, complete
             sequence
          Length = 160292

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 483   gagttttgaggattgccctga 503
             |||||||||||||||||||||
Sbjct: 62442 gagttttgaggattgccctga 62422
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>gb|AC004015.1| Homo sapiens BAC clone CTA-333F24 from 7, complete sequence
          Length = 144239

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 483    gagttttgaggattgccctga 503
              |||||||||||||||||||||
Sbjct: 141132 gagttttgaggattgccctga 141112
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>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12,
             complete sequence
          Length = 190432

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 193   tcgccgtcgtcttctgcttcc 213
             |||||||||||||||||||||
Sbjct: 22124 tcgccgtcgtcttctgcttcc 22104
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>dbj|AK156313.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830016D11 product:hypothetical protein,
           full insert sequence
          Length = 1665

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 493 gattgccctgattcttcagaa 513
           |||||||||||||||||||||
Sbjct: 389 gattgccctgattcttcagaa 369
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>dbj|AK163027.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A430083A01 product:hypothetical protein,
           full insert sequence
          Length = 1104

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 493 gattgccctgattcttcagaa 513
           |||||||||||||||||||||
Sbjct: 562 gattgccctgattcttcagaa 542
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>dbj|AK017900.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
           library, clone:5830405N20 product:hypothetical protein,
           full insert sequence
          Length = 1428

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 493 gattgccctgattcttcagaa 513
           |||||||||||||||||||||
Sbjct: 152 gattgccctgattcttcagaa 132
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>gb|AC159473.7| Mus musculus 10 BAC RP23-215E23 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 190387

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 493   gattgccctgattcttcagaa 513
             |||||||||||||||||||||
Sbjct: 77130 gattgccctgattcttcagaa 77110
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 193      tcgccgtcgtcttctgcttcc 213
                |||||||||||||||||||||
Sbjct: 34110742 tcgccgtcgtcttctgcttcc 34110722
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>dbj|AK103595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133D22, full
           insert sequence
          Length = 2383

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 193 tcgccgtcgtcttctgcttcc 213
           |||||||||||||||||||||
Sbjct: 254 tcgccgtcgtcttctgcttcc 274
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>emb|AL732340.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0811B10, complete
             sequence
          Length = 99356

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 193   tcgccgtcgtcttctgcttcc 213
             |||||||||||||||||||||
Sbjct: 27803 tcgccgtcgtcttctgcttcc 27783
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>gb|AC151775.1| Ornithorhynchus anatinus chromosome UNK clone OABb-307A1, complete
            sequence
          Length = 195598

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 294  ggaggagcggagggagatgg 313
            ||||||||||||||||||||
Sbjct: 4267 ggaggagcggagggagatgg 4248
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>gb|AC147069.2| Pan troglodytes BAC clone RP43-165H20 from 7, complete sequence
          Length = 193047

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 426  agatatcatccaagagaaca 445
            ||||||||||||||||||||
Sbjct: 2257 agatatcatccaagagaaca 2276
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>gb|AC186168.1| Ornithorhynchus anatinus chromosome UNK clone OABb-35C10, complete
            sequence
          Length = 133373

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 294  ggaggagcggagggagatgg 313
            ||||||||||||||||||||
Sbjct: 9845 ggaggagcggagggagatgg 9826
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>emb|AL954205.1| Pan troglodytes chromosome 22 clone RP43-046M07 map q21.1, complete
            sequence
          Length = 174216

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 477  gacattgagttttgaggatt 496
            ||||||||||||||||||||
Sbjct: 1027 gacattgagttttgaggatt 1008
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>emb|AL954202.1| Pan troglodytes chromosome 22 clone PTB-083P20 map q21.1, complete
              sequence
          Length = 197872

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 477    gacattgagttttgaggatt 496
              ||||||||||||||||||||
Sbjct: 173543 gacattgagttttgaggatt 173524
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>emb|AL034451.26|HS191E19 Human DNA sequence from clone RP1-191E19 on chromosome 6q23.2-24.2,
             complete sequence
          Length = 110885

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 383   aggaggttggaggatcatattata 406
             |||||||||||| |||||||||||
Sbjct: 48654 aggaggttggagaatcatattata 48677
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>emb|AL954204.1| Pan troglodytes chromosome 22 clone PTB-051G08 map q21.1, complete
             sequence
          Length = 146898

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 477   gacattgagttttgaggatt 496
             ||||||||||||||||||||
Sbjct: 34091 gacattgagttttgaggatt 34072
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>emb|AL954203.1| Pan troglodytes chromosome 22 clone RP43-019O24 map q21.1, complete
              sequence
          Length = 206110

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 477    gacattgagttttgaggatt 496
              ||||||||||||||||||||
Sbjct: 100611 gacattgagttttgaggatt 100592
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>gb|AC009220.10|AC009220 Homo sapiens chromosome 7 clone RP11-365F18, complete sequence
          Length = 184520

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 426   agatatcatccaagagaaca 445
             ||||||||||||||||||||
Sbjct: 36331 agatatcatccaagagaaca 36312
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>dbj|AP000035.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 6/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 477   gacattgagttttgaggatt 496
             ||||||||||||||||||||
Sbjct: 43726 gacattgagttttgaggatt 43745
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>gb|AC018644.6|AC018644 Homo sapiens chromosome 7 clone RP11-383F6, complete sequence
          Length = 193643

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 426    agatatcatccaagagaaca 445
              ||||||||||||||||||||
Sbjct: 138672 agatatcatccaagagaaca 138653
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>gb|AC006571.12|AC006571 Homo sapiens, clone hRPK.23_A_1, complete sequence
          Length = 134896

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 383    aggaggttggaggatcatattata 406
              |||||||||||| |||||||||||
Sbjct: 132537 aggaggttggagaatcatattata 132560
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>dbj|AP001713.1| Homo sapiens genomic DNA, chromosome 21q, section 57/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 477    gacattgagttttgaggatt 496
              ||||||||||||||||||||
Sbjct: 130334 gacattgagttttgaggatt 130315
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 193     tcgccgtcgtcttctgcttcctct 216
               |||||||||||||| |||||||||
Sbjct: 2163059 tcgccgtcgtcttcggcttcctct 2163082
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>dbj|AP000264.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
            clone:T1844, complete sequence
          Length = 60455

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 477  gacattgagttttgaggatt 496
            ||||||||||||||||||||
Sbjct: 1287 gacattgagttttgaggatt 1268
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>dbj|AP000176.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             Q78C10-f32E9, segment 3/21, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 477   gacattgagttttgaggatt 496
             ||||||||||||||||||||
Sbjct: 93173 gacattgagttttgaggatt 93154
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>dbj|AP000100.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             Q78C10-149C3 region, segment 3/20
          Length = 100000

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 477   gacattgagttttgaggatt 496
             ||||||||||||||||||||
Sbjct: 93173 gacattgagttttgaggatt 93154


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,951,395
Number of Sequences: 3902068
Number of extensions: 3951395
Number of successful extensions: 85088
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84888
Number of HSP's gapped (non-prelim): 199
length of query: 524
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 501
effective length of database: 17,143,297,704
effective search space: 8588792149704
effective search space used: 8588792149704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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