ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags36d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 505 e-140
2dbj|AP006057.3| Oryza sativa (japonica cultivar-group) genomic D... 505 e-140
3dbj|AP005655.2| Oryza sativa (japonica cultivar-group) genomic D... 505 e-140
4gb|AY112161.1| Zea mays CL7520_-1 mRNA sequence 496 e-137
5ref|NM_116506.3| Arabidopsis thaliana unknown protein AT4G02720 ... 167 5e-38
6gb|AC004044.1| Arabidopsis thaliana BAC T5J8 from chromosome IV,... 167 5e-38
7gb|AC002330.1| Arabidopsis thaliana BAC T10P11 from chromosome I... 167 5e-38
8emb|AL161495.2|ATCHRIV7 Arabidopsis thaliana DNA chromosome 4, c... 167 5e-38
9gb|AY102143.1| Arabidopsis thaliana AT4g02720/T10P11_1 mRNA, com... 167 5e-38
10gb|AY075686.1| Arabidopsis thaliana AT4g02720/T10P11_1 mRNA, com... 167 5e-38
11gb|AY112598.1| Zea mays CL7520_3 mRNA sequence 139 1e-29
12gb|AC155339.1| Brassica rapa subsp. pekinensis chromosome Cytoge... 127 5e-26
13ref|XM_720372.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 56 1e-04
14ref|XM_737838.1| Plasmodium chabaudi chabaudi hypothetical prote... 48 0.034
15gb|AF030694.2| Plasmodium falciparum strain Dd2 heat shock prote... 46 0.13
16gb|AF015469.1|AF015469 Plasmodium falciparum microsatellite P4 s... 46 0.13
17ref|XM_662315.1| Cryptosporidium hominis TU502 O1 (Chro.30263) p... 44 0.53
18gb|AC119834.12| Mus musculus chromosome 5, clone RP24-383P24, co... 42 2.1
19gb|AC147026.2| Mus musculus BAC clone RP23-249A22 from chromosom... 42 2.1
20gb|AC116503.17| Mus musculus chromosome 9, clone RP24-302M3, com... 42 2.1
21gb|AC125331.4| Mus musculus chromosome 7 clone RP23-11L1, comple... 42 2.1
22gb|AC147056.3| Pan troglodytes BAC clone RP43-153F5 from 7, comp... 42 2.1
23gb|AC126674.3| Mus musculus BAC clone RP23-364B6 from chromosome... 42 2.1
24gb|AC098715.3| Mus musculus BAC clone RP23-2D23 from 7, complete... 42 2.1
25emb|AJ418064.1|HSA418064 Homo sapiens SMARCA3 gene for SWI/SNF r... 42 2.1
26gb|AC103559.2| Homo sapiens chromosome 3 clone RP11-286L5, compl... 42 2.1
27gb|AC090541.4| Homo sapiens chromosome 8, clone RP11-1105O14, co... 42 2.1
28gb|AC084198.31| Homo sapiens 3 BAC RP11-454H13 (Roswell Park Can... 42 2.1
29gb|AC021059.25| Homo sapiens 3 BAC RP11-464E15 (Roswell Park Can... 42 2.1
30gb|AC098481.2| Homo sapiens chromosome 3 clone RP11-349E16, comp... 42 2.1
31gb|AC092279.2| Homo sapiens chromosome 19 clone CTD-2017D11, com... 42 2.1
32gb|AC011534.3|AC011534 Homo sapiens chromosome 19 clone LLNLR-24... 42 2.1
33emb|BX927123.8| Zebrafish DNA sequence from clone CH211-278N15 i... 42 2.1
34gb|AC111042.8| Mus musculus chromosome 1, clone RP24-106D13, com... 42 2.1
35gb|AC161927.11| Mus musculus chromosome 1, clone RP23-22I18, com... 42 2.1
36gb|DP000016.1| Pan troglodytes target 1 genomic scaffold 40 8.3
37gb|AC139883.8| Mus musculus chromosome 16, clone RP24-304O16, co... 40 8.3
38gb|AC068064.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 8.3
39gb|AC087265.2| Pan troglodytes clone RP43-22H1, complete sequence 40 8.3
40gb|AC087253.2| Pan troglodytes clone RP43-150N20, complete sequence 40 8.3
41gb|AC147069.2| Pan troglodytes BAC clone RP43-165H20 from 7, com... 40 8.3
42ref|XM_657219.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 8.3
43gb|AC162793.8| Mus musculus chromosome 3, clone RP24-347H11, com... 40 8.3
44gb|AC148206.3| Callicebus moloch clone LB5-384O14, complete sequ... 40 8.3
45emb|Z77132.1|CEF54D1 Caenorhabditis elegans Cosmid F54D1, comple... 40 8.3
46gb|AC121772.2| Mus musculus BAC clone RP23-349L11 from 3, comple... 40 8.3
47ref|XM_759711.1| Theileria parva strain Muguga hypothetical prot... 40 8.3
48ref|XM_724360.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 8.3
49gb|AC108774.10| Mus musculus chromosome 1, clone RP23-249J23, co... 40 8.3
50ref|XM_672636.1| Plasmodium berghei strain ANKA heat shock prote... 40 8.3
51gb|AC117573.9| Mus musculus chromosome 3, clone RP23-30D1, compl... 40 8.3
52emb|AL590815.5| Human DNA sequence from clone RP11-492M21 on chr... 40 8.3
53gb|AC109322.16| Homo sapiens chromosome 8, clone CTD-3065J16, co... 40 8.3
54gb|AC100183.11| Mus musculus chromosome 3, clone RP23-54L16, com... 40 8.3
55gb|AF411808.1| Lycopersicon esculentum BAC clone Clemson_Id 62O1... 40 8.3
56gb|AC165189.4| Nomascus leucogenys leucogenys clone CH271-329K4,... 40 8.3
57gb|AC135614.15| Pan troglodytes clone rp43-3m22, complete sequence 40 8.3
58gb|AC006946.20| Homo sapiens Chromosome 22q11 Pac Clone p109l3 i... 40 8.3
59gb|AC104840.2| Homo sapiens BAC clone RP11-10E9 from 4, complete... 40 8.3
60gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold 40 8.3
61gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold 40 8.3
62gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold 40 8.3
63gb|AC087773.1|AC087773 Genomic Sequence For Lycopersicon esculen... 40 8.3
64dbj|AB190773.1| Mesembryanthemum crystallinum PTL1 mRNA for plas... 40 8.3
65gb|AC018644.6|AC018644 Homo sapiens chromosome 7 clone RP11-383F... 40 8.3
66gb|AC002080.1|AC002080 Human BAC clone CTA-253B13 from 7q31-q32,... 40 8.3
67gb|AF125348.1|AF125348 Homo sapiens caveolin 1 (CAV1) gene, exon... 40 8.3
68gb|AC148246.3| Saimiri boliviensis boliviensis clone CH254-471K1... 40 8.3
69gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 8.3
70gb|AC154565.2| Mus musculus BAC clone RP23-403J19 from chromosom... 40 8.3
71emb|BX322597.3| Zebrafish DNA sequence from clone RP71-7L19 in l... 40 8.3
72gb|AC148187.3| Saimiri boliviensis boliviensis clone CH254-373M5... 40 8.3
73gb|AC142557.3| Cercopithecus aethiops clone CH252-402M4, complet... 40 8.3
74gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete ge... 40 8.3
75emb|BX072536.4| Mouse DNA sequence from clone RP23-5A21 on chrom... 40 8.3
76gb|AC002077.1|HSAC002077 Human cosmid clone LUCA17 from 3p21.3, ... 40 8.3
77gb|DP000019.1| Callicebus moloch target 1 genomic scaffold 40 8.3
78gb|AC163644.4| Mus musculus BAC clone RP24-394I24 from chromosom... 40 8.3
79dbj|AP000549.1| Homo sapiens genomic DNA, chromosome 22q11.2, Ca... 40 8.3 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  505 bits (255), Expect = e-140
 Identities = 444/507 (87%)
 Strand = Plus / Plus

                                                                            
Query: 95       gagctcaaggaagaagagtagcagtcagtctgattctgaagattcgatcccttctgatgc 154
                ||||||| ||| |||||| ||||  ||||||||||| ||||||  |  ||| || |||||
Sbjct: 17087737 gagctcacggaggaagaggagcaagcagtctgattcggaagatcaggccccatccgatgc 17087796

                                                                            
Query: 155      catcattgatgaaaaggaaattgaagagacagatgagccagagattgacccagaggcaat 214
                |  | ||| ||  |||||||| || |||||| |||||||||||||||||||||| |||||
Sbjct: 17087797 cgaccttggtgttaaggaaatcgatgagacaaatgagccagagattgacccagaagcaat 17087856

                                                                            
Query: 215      taagttcaaggaaatgcttgaggctcagaagaaggctgcactggagaatgagatgcctgt 274
                 || |||||||||||||| ||||| || |||||||||||  |||||||||||||||| ||
Sbjct: 17087857 caaattcaaggaaatgctcgaggcccaaaagaaggctgctttggagaatgagatgccggt 17087916

                                                                            
Query: 275      tggaccgatgccactcccgcgtgcagatggtcatattagctatggtggtgcactgaggcc 334
                ||| || ||||| || || |||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 17087917 tgggccaatgcctcttcctcgtgcagaaggtcatattagctatggtggtgcactgagacc 17087976

                                                                            
Query: 335      cggtgaaggtgatgccattgcacaatatgtacagcaggggaagcgtatcccacggcgtgg 394
                 || ||||||||||| |||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 17087977 tggagaaggtgatgctattgcacagtacgtacagcaagggaaacgtatcccacgacgtgg 17088036

                                                                            
Query: 395      tgaggttggtctttctgcggatgagattcagaagtttgaagatttggggtatgtgatgag 454
                |||||||||||| ||||| || |||||||||||||| || |||||||| |||||||||||
Sbjct: 17088037 tgaggttggtctatctgcagaggagattcagaagttcgaggatttgggctatgtgatgag 17088096

                                                                            
Query: 455      tggaagtaggcaccagaggatgaatgctatccgtataaggaaggaaaaccaagtttatag 514
                ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 17088097 tgggagtaggcaccagaggatgaatgctatccgtataaggaaggaaaaccaggtttacag 17088156

                                                                            
Query: 515      tgcagaggataagagagcactggccatgtttaactacgaggagaagtcaaagagagagca 574
                ||||||||||||||| || || || |||||||| || ||||||||||| ||| |||||||
Sbjct: 17088157 tgcagaggataagagggcgcttgctatgtttaattatgaggagaagtcgaagcgagagca 17088216

                                           
Query: 575      caaggttatggctgatttgcagcgctt 601
                |||||| ||||||||||||||||||||
Sbjct: 17088217 caaggtcatggctgatttgcagcgctt 17088243
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>dbj|AP006057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1342C04
          Length = 172097

 Score =  505 bits (255), Expect = e-140
 Identities = 444/507 (87%)
 Strand = Plus / Plus

                                                                         
Query: 95    gagctcaaggaagaagagtagcagtcagtctgattctgaagattcgatcccttctgatgc 154
             ||||||| ||| |||||| ||||  ||||||||||| ||||||  |  ||| || |||||
Sbjct: 28494 gagctcacggaggaagaggagcaagcagtctgattcggaagatcaggccccatccgatgc 28553

                                                                         
Query: 155   catcattgatgaaaaggaaattgaagagacagatgagccagagattgacccagaggcaat 214
             |  | ||| ||  |||||||| || |||||| |||||||||||||||||||||| |||||
Sbjct: 28554 cgaccttggtgttaaggaaatcgatgagacaaatgagccagagattgacccagaagcaat 28613

                                                                         
Query: 215   taagttcaaggaaatgcttgaggctcagaagaaggctgcactggagaatgagatgcctgt 274
              || |||||||||||||| ||||| || |||||||||||  |||||||||||||||| ||
Sbjct: 28614 caaattcaaggaaatgctcgaggcccaaaagaaggctgctttggagaatgagatgccggt 28673

                                                                         
Query: 275   tggaccgatgccactcccgcgtgcagatggtcatattagctatggtggtgcactgaggcc 334
             ||| || ||||| || || |||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 28674 tgggccaatgcctcttcctcgtgcagaaggtcatattagctatggtggtgcactgagacc 28733

                                                                         
Query: 335   cggtgaaggtgatgccattgcacaatatgtacagcaggggaagcgtatcccacggcgtgg 394
              || ||||||||||| |||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 28734 tggagaaggtgatgctattgcacagtacgtacagcaagggaaacgtatcccacgacgtgg 28793

                                                                         
Query: 395   tgaggttggtctttctgcggatgagattcagaagtttgaagatttggggtatgtgatgag 454
             |||||||||||| ||||| || |||||||||||||| || |||||||| |||||||||||
Sbjct: 28794 tgaggttggtctatctgcagaggagattcagaagttcgaggatttgggctatgtgatgag 28853

                                                                         
Query: 455   tggaagtaggcaccagaggatgaatgctatccgtataaggaaggaaaaccaagtttatag 514
             ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 28854 tgggagtaggcaccagaggatgaatgctatccgtataaggaaggaaaaccaggtttacag 28913

                                                                         
Query: 515   tgcagaggataagagagcactggccatgtttaactacgaggagaagtcaaagagagagca 574
             ||||||||||||||| || || || |||||||| || ||||||||||| ||| |||||||
Sbjct: 28914 tgcagaggataagagggcgcttgctatgtttaattatgaggagaagtcgaagcgagagca 28973

                                        
Query: 575   caaggttatggctgatttgcagcgctt 601
             |||||| ||||||||||||||||||||
Sbjct: 28974 caaggtcatggctgatttgcagcgctt 29000
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>dbj|AP005655.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0025H07
          Length = 145605

 Score =  505 bits (255), Expect = e-140
 Identities = 444/507 (87%)
 Strand = Plus / Plus

                                                                         
Query: 95    gagctcaaggaagaagagtagcagtcagtctgattctgaagattcgatcccttctgatgc 154
             ||||||| ||| |||||| ||||  ||||||||||| ||||||  |  ||| || |||||
Sbjct: 81396 gagctcacggaggaagaggagcaagcagtctgattcggaagatcaggccccatccgatgc 81455

                                                                         
Query: 155   catcattgatgaaaaggaaattgaagagacagatgagccagagattgacccagaggcaat 214
             |  | ||| ||  |||||||| || |||||| |||||||||||||||||||||| |||||
Sbjct: 81456 cgaccttggtgttaaggaaatcgatgagacaaatgagccagagattgacccagaagcaat 81515

                                                                         
Query: 215   taagttcaaggaaatgcttgaggctcagaagaaggctgcactggagaatgagatgcctgt 274
              || |||||||||||||| ||||| || |||||||||||  |||||||||||||||| ||
Sbjct: 81516 caaattcaaggaaatgctcgaggcccaaaagaaggctgctttggagaatgagatgccggt 81575

                                                                         
Query: 275   tggaccgatgccactcccgcgtgcagatggtcatattagctatggtggtgcactgaggcc 334
             ||| || ||||| || || |||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 81576 tgggccaatgcctcttcctcgtgcagaaggtcatattagctatggtggtgcactgagacc 81635

                                                                         
Query: 335   cggtgaaggtgatgccattgcacaatatgtacagcaggggaagcgtatcccacggcgtgg 394
              || ||||||||||| |||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 81636 tggagaaggtgatgctattgcacagtacgtacagcaagggaaacgtatcccacgacgtgg 81695

                                                                         
Query: 395   tgaggttggtctttctgcggatgagattcagaagtttgaagatttggggtatgtgatgag 454
             |||||||||||| ||||| || |||||||||||||| || |||||||| |||||||||||
Sbjct: 81696 tgaggttggtctatctgcagaggagattcagaagttcgaggatttgggctatgtgatgag 81755

                                                                         
Query: 455   tggaagtaggcaccagaggatgaatgctatccgtataaggaaggaaaaccaagtttatag 514
             ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 81756 tgggagtaggcaccagaggatgaatgctatccgtataaggaaggaaaaccaggtttacag 81815

                                                                         
Query: 515   tgcagaggataagagagcactggccatgtttaactacgaggagaagtcaaagagagagca 574
             ||||||||||||||| || || || |||||||| || ||||||||||| ||| |||||||
Sbjct: 81816 tgcagaggataagagggcgcttgctatgtttaattatgaggagaagtcgaagcgagagca 81875

                                        
Query: 575   caaggttatggctgatttgcagcgctt 601
             |||||| ||||||||||||||||||||
Sbjct: 81876 caaggtcatggctgatttgcagcgctt 81902
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>gb|AY112161.1| Zea mays CL7520_-1 mRNA sequence
          Length = 595

 Score =  496 bits (250), Expect = e-137
 Identities = 373/414 (90%)
 Strand = Plus / Plus

                                                                       
Query: 191 gccagagattgacccagaggcaattaagttcaaggaaatgcttgaggctcagaagaaggc 250
           |||||| ||||| ||||| ||||| |||||||||||||| |||||||| |||||||||||
Sbjct: 162 gccagaaattgatccagaagcaatcaagttcaaggaaatccttgaggcccagaagaaggc 221

                                                                       
Query: 251 tgcactggagaatgagatgcctgttggaccgatgccactcccgcgtgcagatggtcatat 310
           | |  ||||||| || ||||||||||| || |||||||| || || ||||| || |||||
Sbjct: 222 ttccttggagaacgatatgcctgttggtccaatgccacttccacgcgcagaagggcatat 281

                                                                       
Query: 311 tagctatggtggtgcactgaggcccggtgaaggtgatgccattgcacaatatgtacagca 370
           ||| |||||||||||||| ||||| || |||||||| || |||||||| ||||| |||||
Sbjct: 282 tagttatggtggtgcacttaggcctggagaaggtgacgcaattgcacagtatgttcagca 341

                                                                       
Query: 371 ggggaagcgtatcccacggcgtggtgaggttggtctttctgcggatgagattcagaagtt 430
            ||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 342 agggaagcgtatcccacggcgtggtgaggttggtctgtctgcagaagagattcagaagtt 401

                                                                       
Query: 431 tgaagatttggggtatgtgatgagtggaagtaggcaccagaggatgaatgctatccgtat 490
           ||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 402 tgaggatctggggtatgtgatgagtgggagtaggcaccagaggatgaatgctatccgtat 461

                                                                       
Query: 491 aaggaaggaaaaccaagtttatagtgcagaggataagagagcactggccatgtttaacta 550
            ||||||||||| || ||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 462 caggaaggaaaatcaggtttatagtgctgaggataagagagcattggccatgtttaacta 521

                                                                 
Query: 551 cgaggagaagtcaaagagagagcacaaggttatggctgatttgcagcgcttggt 604
           |||||||||||||||| | |||||||||||||||||||| ||||||||||||||
Sbjct: 522 cgaggagaagtcaaagcgggagcacaaggttatggctgacttgcagcgcttggt 575



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 123 tctgattctgaagattcgatcccttctgatgcca 156
           |||||||||||||| ||| |||||||||||||||
Sbjct: 91  tctgattctgaagaatcggtcccttctgatgcca 124
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>ref|NM_116506.3| Arabidopsis thaliana unknown protein AT4G02720 mRNA, complete cds
          Length = 1564

 Score =  167 bits (84), Expect = 5e-38
 Identities = 234/284 (82%)
 Strand = Plus / Plus

                                                                        
Query: 315  tatggtggtgcactgaggcccggtgaaggtgatgccattgcacaatatgtacagcagggg 374
            |||||||||||  | || ||||||||||| || ||||||||||| ||||| ||||| || 
Sbjct: 954  tatggtggtgctttaagacccggtgaaggagacgccattgcacagtatgttcagcaaggt 1013

                                                                        
Query: 375  aagcgtatcccacggcgtggtgaggttggtctttctgcggatgagattcagaagtttgaa 434
            || |||||||||||  | || || || ||||||   || || ||||||||||||||||| 
Sbjct: 1014 aaacgtatcccacgtagaggagaagtgggtcttaacgctgaagagattcagaagtttgag 1073

                                                                        
Query: 435  gatttggggtatgtgatgagtggaagtaggcaccagaggatgaatgctatccgtataagg 494
            ||| | || ||||||||||||||||||||||| || |||||||||||||| ||||| || 
Sbjct: 1074 gatcttggttatgtgatgagtggaagtaggcatcaaaggatgaatgctattcgtattaga 1133

                                                                        
Query: 495  aaggaaaaccaagtttatagtgcagaggataagagagcactggccatgtttaactacgag 554
            || |||||||| ||||| ||||| || || ||  | ||| ||||||||||||||||||||
Sbjct: 1134 aaagaaaaccaggtttacagtgctgaagacaaacgggcattggccatgtttaactacgag 1193

                                                        
Query: 555  gagaagtcaaagagagagcacaaggttatggctgatttgcagcg 598
            |||||| | ||| | |||   ||||||||| ||||| |||||||
Sbjct: 1194 gagaaggcgaagcgcgaggctaaggttatgtctgatctgcagcg 1237
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>gb|AC004044.1| Arabidopsis thaliana BAC T5J8 from chromosome IV, top arm, complete
            sequence
          Length = 98527

 Score =  167 bits (84), Expect = 5e-38
 Identities = 234/284 (82%)
 Strand = Plus / Minus

                                                                        
Query: 315  tatggtggtgcactgaggcccggtgaaggtgatgccattgcacaatatgtacagcagggg 374
            |||||||||||  | || ||||||||||| || ||||||||||| ||||| ||||| || 
Sbjct: 2003 tatggtggtgctttaagacccggtgaaggagacgccattgcacagtatgttcagcaaggt 1944

                                                                        
Query: 375  aagcgtatcccacggcgtggtgaggttggtctttctgcggatgagattcagaagtttgaa 434
            || |||||||||||  | || || || ||||||   || || ||||||||||||||||| 
Sbjct: 1943 aaacgtatcccacgtagaggagaagtgggtcttaacgctgaagagattcagaagtttgag 1884

                                                                        
Query: 435  gatttggggtatgtgatgagtggaagtaggcaccagaggatgaatgctatccgtataagg 494
            ||| | || ||||||||||||||||||||||| || |||||||||||||| ||||| || 
Sbjct: 1883 gatcttggttatgtgatgagtggaagtaggcatcaaaggatgaatgctattcgtattaga 1824

                                                                        
Query: 495  aaggaaaaccaagtttatagtgcagaggataagagagcactggccatgtttaactacgag 554
            || |||||||| ||||| ||||| || || ||  | ||| ||||||||||||||||||||
Sbjct: 1823 aaagaaaaccaggtttacagtgctgaagacaaacgggcattggccatgtttaactacgag 1764

                                                        
Query: 555  gagaagtcaaagagagagcacaaggttatggctgatttgcagcg 598
            |||||| | ||| | |||   ||||||||| ||||| |||||||
Sbjct: 1763 gagaaggcgaagcgcgaggctaaggttatgtctgatctgcagcg 1720
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>gb|AC002330.1| Arabidopsis thaliana BAC T10P11 from chromosome IV, near 15 cM,
            complete sequence
          Length = 113566

 Score =  167 bits (84), Expect = 5e-38
 Identities = 234/284 (82%)
 Strand = Plus / Plus

                                                                        
Query: 315  tatggtggtgcactgaggcccggtgaaggtgatgccattgcacaatatgtacagcagggg 374
            |||||||||||  | || ||||||||||| || ||||||||||| ||||| ||||| || 
Sbjct: 6181 tatggtggtgctttaagacccggtgaaggagacgccattgcacagtatgttcagcaaggt 6240

                                                                        
Query: 375  aagcgtatcccacggcgtggtgaggttggtctttctgcggatgagattcagaagtttgaa 434
            || |||||||||||  | || || || ||||||   || || ||||||||||||||||| 
Sbjct: 6241 aaacgtatcccacgtagaggagaagtgggtcttaacgctgaagagattcagaagtttgag 6300

                                                                        
Query: 435  gatttggggtatgtgatgagtggaagtaggcaccagaggatgaatgctatccgtataagg 494
            ||| | || ||||||||||||||||||||||| || |||||||||||||| ||||| || 
Sbjct: 6301 gatcttggttatgtgatgagtggaagtaggcatcaaaggatgaatgctattcgtattaga 6360

                                                                        
Query: 495  aaggaaaaccaagtttatagtgcagaggataagagagcactggccatgtttaactacgag 554
            || |||||||| ||||| ||||| || || ||  | ||| ||||||||||||||||||||
Sbjct: 6361 aaagaaaaccaggtttacagtgctgaagacaaacgggcattggccatgtttaactacgag 6420

                                                        
Query: 555  gagaagtcaaagagagagcacaaggttatggctgatttgcagcg 598
            |||||| | ||| | |||   ||||||||| ||||| |||||||
Sbjct: 6421 gagaaggcgaagcgcgaggctaaggttatgtctgatctgcagcg 6464
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>emb|AL161495.2|ATCHRIV7 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 7
          Length = 199615

 Score =  167 bits (84), Expect = 5e-38
 Identities = 234/284 (82%)
 Strand = Plus / Minus

                                                                         
Query: 315   tatggtggtgcactgaggcccggtgaaggtgatgccattgcacaatatgtacagcagggg 374
             |||||||||||  | || ||||||||||| || ||||||||||| ||||| ||||| || 
Sbjct: 50672 tatggtggtgctttaagacccggtgaaggagacgccattgcacagtatgttcagcaaggt 50613

                                                                         
Query: 375   aagcgtatcccacggcgtggtgaggttggtctttctgcggatgagattcagaagtttgaa 434
             || |||||||||||  | || || || ||||||   || || ||||||||||||||||| 
Sbjct: 50612 aaacgtatcccacgtagaggagaagtgggtcttaacgctgaagagattcagaagtttgag 50553

                                                                         
Query: 435   gatttggggtatgtgatgagtggaagtaggcaccagaggatgaatgctatccgtataagg 494
             ||| | || ||||||||||||||||||||||| || |||||||||||||| ||||| || 
Sbjct: 50552 gatcttggttatgtgatgagtggaagtaggcatcaaaggatgaatgctattcgtattaga 50493

                                                                         
Query: 495   aaggaaaaccaagtttatagtgcagaggataagagagcactggccatgtttaactacgag 554
             || |||||||| ||||| ||||| || || ||  | ||| ||||||||||||||||||||
Sbjct: 50492 aaagaaaaccaggtttacagtgctgaagacaaacgggcattggccatgtttaactacgag 50433

                                                         
Query: 555   gagaagtcaaagagagagcacaaggttatggctgatttgcagcg 598
             |||||| | ||| | |||   ||||||||| ||||| |||||||
Sbjct: 50432 gagaaggcgaagcgcgaggctaaggttatgtctgatctgcagcg 50389
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>gb|AY102143.1| Arabidopsis thaliana AT4g02720/T10P11_1 mRNA, complete cds
          Length = 1269

 Score =  167 bits (84), Expect = 5e-38
 Identities = 234/284 (82%)
 Strand = Plus / Plus

                                                                        
Query: 315  tatggtggtgcactgaggcccggtgaaggtgatgccattgcacaatatgtacagcagggg 374
            |||||||||||  | || ||||||||||| || ||||||||||| ||||| ||||| || 
Sbjct: 901  tatggtggtgctttaagacccggtgaaggagacgccattgcacagtatgttcagcaaggt 960

                                                                        
Query: 375  aagcgtatcccacggcgtggtgaggttggtctttctgcggatgagattcagaagtttgaa 434
            || |||||||||||  | || || || ||||||   || || ||||||||||||||||| 
Sbjct: 961  aaacgtatcccacgtagaggagaagtgggtcttaacgctgaagagattcagaagtttgag 1020

                                                                        
Query: 435  gatttggggtatgtgatgagtggaagtaggcaccagaggatgaatgctatccgtataagg 494
            ||| | || ||||||||||||||||||||||| || |||||||||||||| ||||| || 
Sbjct: 1021 gatcttggttatgtgatgagtggaagtaggcatcaaaggatgaatgctattcgtattaga 1080

                                                                        
Query: 495  aaggaaaaccaagtttatagtgcagaggataagagagcactggccatgtttaactacgag 554
            || |||||||| ||||| ||||| || || ||  | ||| ||||||||||||||||||||
Sbjct: 1081 aaagaaaaccaggtttacagtgctgaagacaaacgggcattggccatgtttaactacgag 1140

                                                        
Query: 555  gagaagtcaaagagagagcacaaggttatggctgatttgcagcg 598
            |||||| | ||| | |||   ||||||||| ||||| |||||||
Sbjct: 1141 gagaaggcgaagcgcgaggctaaggttatgtctgatctgcagcg 1184
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>gb|AY075686.1| Arabidopsis thaliana AT4g02720/T10P11_1 mRNA, complete cds
          Length = 1561

 Score =  167 bits (84), Expect = 5e-38
 Identities = 234/284 (82%)
 Strand = Plus / Plus

                                                                        
Query: 315  tatggtggtgcactgaggcccggtgaaggtgatgccattgcacaatatgtacagcagggg 374
            |||||||||||  | || ||||||||||| || ||||||||||| ||||| ||||| || 
Sbjct: 954  tatggtggtgctttaagacccggtgaaggagacgccattgcacagtatgttcagcaaggt 1013

                                                                        
Query: 375  aagcgtatcccacggcgtggtgaggttggtctttctgcggatgagattcagaagtttgaa 434
            || |||||||||||  | || || || ||||||   || || ||||||||||||||||| 
Sbjct: 1014 aaacgtatcccacgtagaggagaagtgggtcttaacgctgaagagattcagaagtttgag 1073

                                                                        
Query: 435  gatttggggtatgtgatgagtggaagtaggcaccagaggatgaatgctatccgtataagg 494
            ||| | || ||||||||||||||||||||||| || |||||||||||||| ||||| || 
Sbjct: 1074 gatcttggttatgtgatgagtggaagtaggcatcaaaggatgaatgctattcgtattaga 1133

                                                                        
Query: 495  aaggaaaaccaagtttatagtgcagaggataagagagcactggccatgtttaactacgag 554
            || |||||||| ||||| ||||| || || ||  | ||| ||||||||||||||||||||
Sbjct: 1134 aaagaaaaccaggtttacagtgctgaagacaaacgggcattggccatgtttaactacgag 1193

                                                        
Query: 555  gagaagtcaaagagagagcacaaggttatggctgatttgcagcg 598
            |||||| | ||| | |||   ||||||||| ||||| |||||||
Sbjct: 1194 gagaaggcgaagcgcgaggctaaggttatgtctgatctgcagcg 1237
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>gb|AY112598.1| Zea mays CL7520_3 mRNA sequence
          Length = 312

 Score =  139 bits (70), Expect = 1e-29
 Identities = 82/86 (95%)
 Strand = Plus / Plus

                                                                       
Query: 519 gaggataagagagcactggccatgtttaactacgaggagaagtcaaagagagagcacaag 578
           ||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 4   gaggataagagagcattggccatgtttaactacgaggagaagtcaaagcgggagcacaag 63

                                     
Query: 579 gttatggctgatttgcagcgcttggt 604
           ||||||||||| ||||||||||||||
Sbjct: 64  gttatggctgacttgcagcgcttggt 89
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>gb|AC155339.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
             clone KBrH015H17, complete sequence
          Length = 110885

 Score =  127 bits (64), Expect = 5e-26
 Identities = 124/144 (86%)
 Strand = Plus / Plus

                                                                         
Query: 417   gagattcagaagtttgaagatttggggtatgtgatgagtggaagtaggcaccagaggatg 476
             |||||||||| |||||| ||| | |||||||| |||||||| |||||||| || ||||||
Sbjct: 45845 gagattcagaggtttgaggatcttgggtatgtcatgagtgggagtaggcatcaaaggatg 45904

                                                                         
Query: 477   aatgctatccgtataaggaaggaaaaccaagtttatagtgcagaggataagagagcactg 536
             |||||||||||||| |||||||| ||||| ||||| ||||| || |||||  | ||  ||
Sbjct: 45905 aatgctatccgtatcaggaaggagaaccaggtttacagtgctgaagataaacgggcgttg 45964

                                     
Query: 537   gccatgtttaactacgaggagaag 560
             |||||||||||||| |||||||||
Sbjct: 45965 gccatgtttaactatgaggagaag 45988
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>ref|XM_720372.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05066)
            partial mRNA
          Length = 2469

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                        
Query: 474  atgaatgctatccgtataaggaaggaaaaccaagtttatagtgc 517
            |||||||| || |||||||| || ||||||||||||||||||||
Sbjct: 2290 atgaatgcaatacgtataagaaaagaaaaccaagtttatagtgc 2333
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>ref|XM_737838.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000579.02.0)
           partial mRNA
          Length = 534

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 474 atgaatgctatccgtataaggaaggaaaaccaagtttatagtgc 517
           |||||||| || ||||| || || ||||||||||||||||||||
Sbjct: 355 atgaatgcaatacgtatgagaaaagaaaaccaagtttatagtgc 398
to top
>gb|AF030694.2| Plasmodium falciparum strain Dd2 heat shock protein 86 (HSP86), O1
            (o1), O3 (o3), O2 (o2), CG8 (cg8), CG4 (cg4), CG3 (cg3),
            putative chloroquine resistance transporter (crt), CG9
            (cg9), CG1 (cg1), CG6 (cg6), CG2 (cg2), and CG7 (cg7)
            genes, complete cds
          Length = 47573

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 474  atgaatgctatccgtataaggaaggaaaaccaagtttatagtgcaga 520
            ||||| ||||| ||||| || || ||||||||||| |||||||||||
Sbjct: 6028 atgaacgctattcgtatgagaaaagaaaaccaagtatatagtgcaga 5982
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>gb|AF015469.1|AF015469 Plasmodium falciparum microsatellite P4 sequence
          Length = 2336

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 474  atgaatgctatccgtataaggaaggaaaaccaagtttatagtgcaga 520
            ||||| ||||| ||||| || || ||||||||||| |||||||||||
Sbjct: 2084 atgaacgctattcgtatgagaaaagaaaaccaagtatatagtgcaga 2130
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>ref|XM_662315.1| Cryptosporidium hominis TU502 O1 (Chro.30263) partial mRNA
          Length = 639

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 444 tatgtgatgagtggaagtaggcaccagaggatgaatgctatccgtataaggaaggaaaac 503
           ||||||||||||||||||| |||| |||| ||||  ||| |  | || || ||||| |||
Sbjct: 454 tatgtgatgagtggaagtatgcacaagagaatgacagctgtaagaattagaaaggagaac 513

                     
Query: 504 caagtttata 513
           ||||||||||
Sbjct: 514 caagtttata 523
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>gb|AC119834.12| Mus musculus chromosome 5, clone RP24-383P24, complete sequence
          Length = 223764

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 489   ataaggaaggaaaaccaagtt 509
             |||||||||||||||||||||
Sbjct: 65616 ataaggaaggaaaaccaagtt 65596
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>gb|AC147026.2| Mus musculus BAC clone RP23-249A22 from chromosome 19, complete sequence
          Length = 190038

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 525    aagagagcactggccatgttt 545
              |||||||||||||||||||||
Sbjct: 173611 aagagagcactggccatgttt 173591
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>gb|AC116503.17| Mus musculus chromosome 9, clone RP24-302M3, complete sequence
          Length = 199065

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    ctagctctgaggaggtggagg 48
             |||||||||||||||||||||
Sbjct: 40340 ctagctctgaggaggtggagg 40360
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>gb|AC125331.4| Mus musculus chromosome 7 clone RP23-11L1, complete sequence
          Length = 255921

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 245   gaaggctgcactggagaatga 265
             |||||||||||||||||||||
Sbjct: 23433 gaaggctgcactggagaatga 23453
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>gb|AC147056.3| Pan troglodytes BAC clone RP43-153F5 from 7, complete sequence
          Length = 167738

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 27    gctagctctgaggaggtggag 47
             |||||||||||||||||||||
Sbjct: 97595 gctagctctgaggaggtggag 97575
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>gb|AC126674.3| Mus musculus BAC clone RP23-364B6 from chromosome 19, complete sequence
          Length = 203282

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 525   aagagagcactggccatgttt 545
             |||||||||||||||||||||
Sbjct: 19788 aagagagcactggccatgttt 19768
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>gb|AC098715.3| Mus musculus BAC clone RP23-2D23 from 7, complete sequence
          Length = 247835

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 245    gaaggctgcactggagaatga 265
              |||||||||||||||||||||
Sbjct: 191262 gaaggctgcactggagaatga 191282
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>emb|AJ418064.1|HSA418064 Homo sapiens SMARCA3 gene for SWI/SNF related, matrix associated, actin
             dependent regulator of chromatin, subfamily a, member 3,
             exons 1-26
          Length = 56403

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    ctgaggaggtggaggttgtag 54
             |||||||||||||||||||||
Sbjct: 20777 ctgaggaggtggaggttgtag 20757
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>gb|AC103559.2| Homo sapiens chromosome 3 clone RP11-286L5, complete sequence
          Length = 184133

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 34     ctgaggaggtggaggttgtag 54
              |||||||||||||||||||||
Sbjct: 100303 ctgaggaggtggaggttgtag 100283
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>gb|AC090541.4| Homo sapiens chromosome 8, clone RP11-1105O14, complete sequence
          Length = 167319

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    ctgaggaggtggaggttgtag 54
             |||||||||||||||||||||
Sbjct: 42807 ctgaggaggtggaggttgtag 42787
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>gb|AC084198.31| Homo sapiens 3 BAC RP11-454H13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 194955

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    ctgaggaggtggaggttgtag 54
             |||||||||||||||||||||
Sbjct: 15630 ctgaggaggtggaggttgtag 15610
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>gb|AC021059.25| Homo sapiens 3 BAC RP11-464E15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 164076

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 34    ctgaggaggtggaggttgtag 54
             |||||||||||||||||||||
Sbjct: 97054 ctgaggaggtggaggttgtag 97074
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>gb|AC098481.2| Homo sapiens chromosome 3 clone RP11-349E16, complete sequence
          Length = 227137

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 34     ctgaggaggtggaggttgtag 54
              |||||||||||||||||||||
Sbjct: 224058 ctgaggaggtggaggttgtag 224038
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>gb|AC092279.2| Homo sapiens chromosome 19 clone CTD-2017D11, complete sequence
          Length = 117559

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    ctgaggaggtggaggttgtag 54
             |||||||||||||||||||||
Sbjct: 16322 ctgaggaggtggaggttgtag 16302
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>gb|AC011534.3|AC011534 Homo sapiens chromosome 19 clone LLNLR-242A12, complete sequence
          Length = 36838

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 34   ctgaggaggtggaggttgtag 54
            |||||||||||||||||||||
Sbjct: 9664 ctgaggaggtggaggttgtag 9644
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>emb|BX927123.8| Zebrafish DNA sequence from clone CH211-278N15 in linkage group 20,
             complete sequence
          Length = 121145

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 421   ttcagaagtttgaagatttgg 441
             |||||||||||||||||||||
Sbjct: 93758 ttcagaagtttgaagatttgg 93738
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>gb|AC111042.8| Mus musculus chromosome 1, clone RP24-106D13, complete sequence
          Length = 144559

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 554    ggagaagtcaaagagagagca 574
              |||||||||||||||||||||
Sbjct: 111868 ggagaagtcaaagagagagca 111888
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>gb|AC161927.11| Mus musculus chromosome 1, clone RP23-22I18, complete sequence
          Length = 223377

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 554   ggagaagtcaaagagagagca 574
             |||||||||||||||||||||
Sbjct: 98106 ggagaagtcaaagagagagca 98086
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>gb|DP000016.1| Pan troglodytes target 1 genomic scaffold
          Length = 1623484

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    agttcaaggaaatgcttgag 236
              ||||||||||||||||||||
Sbjct: 462068 agttcaaggaaatgcttgag 462087
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>gb|AC139883.8| Mus musculus chromosome 16, clone RP24-304O16, complete sequence
          Length = 138043

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   gcactggagaatgagatgcc 271
             ||||||||||||||||||||
Sbjct: 60350 gcactggagaatgagatgcc 60331
to top
>gb|AC068064.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-199I14, complete
             sequence
          Length = 152776

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 514   gtgcagaggataagagagca 533
             ||||||||||||||||||||
Sbjct: 52216 gtgcagaggataagagagca 52235
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>gb|AC087265.2| Pan troglodytes clone RP43-22H1, complete sequence
          Length = 136362

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    agttcaaggaaatgcttgag 236
              ||||||||||||||||||||
Sbjct: 133424 agttcaaggaaatgcttgag 133443
to top
>gb|AC087253.2| Pan troglodytes clone RP43-150N20, complete sequence
          Length = 126559

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  agttcaaggaaatgcttgag 236
            ||||||||||||||||||||
Sbjct: 5288 agttcaaggaaatgcttgag 5307
to top
>gb|AC147069.2| Pan troglodytes BAC clone RP43-165H20 from 7, complete sequence
          Length = 193047

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   aattaagttcaaggaaatgc 231
             ||||||||||||||||||||
Sbjct: 48748 aattaagttcaaggaaatgc 48729
to top
>ref|XM_657219.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4707.2), mRNA
          Length = 771

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 220 tcaaggaaatgcttgaggct 239
           ||||||||||||||||||||
Sbjct: 410 tcaaggaaatgcttgaggct 429
to top
>gb|AC162793.8| Mus musculus chromosome 3, clone RP24-347H11, complete sequence
          Length = 154379

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 499   aaaaccaagtttatagtgca 518
             ||||||||||||||||||||
Sbjct: 97569 aaaaccaagtttatagtgca 97588
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>gb|AC148206.3| Callicebus moloch clone LB5-384O14, complete sequence
          Length = 160507

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   agttcaaggaaatgcttgag 236
             ||||||||||||||||||||
Sbjct: 37623 agttcaaggaaatgcttgag 37642
to top
>emb|Z77132.1|CEF54D1 Caenorhabditis elegans Cosmid F54D1, complete sequence
          Length = 33266

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    gaggaggtggaggttgtagg 55
             ||||||||||||||||||||
Sbjct: 25185 gaggaggtggaggttgtagg 25204
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>gb|AC121772.2| Mus musculus BAC clone RP23-349L11 from 3, complete sequence
          Length = 201923

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      gagtttggatgttcctctga 25
              ||||||||||||||||||||
Sbjct: 110286 gagtttggatgttcctctga 110305
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>ref|XM_759711.1| Theileria parva strain Muguga hypothetical protein (TP02_0238)
           partial mRNA
          Length = 744

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 315 tatggtggtgcactgaggcccggtgaaggtgatgccattgcaca 358
           ||||| |||| ||| | ||| |||||||| ||||||||||||||
Sbjct: 400 tatggcggtgaacttatgccaggtgaaggagatgccattgcaca 443
to top
>ref|XM_724360.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01661)
            partial mRNA
          Length = 2706

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 162  gatgaaaaggaaattgaaga 181
            ||||||||||||||||||||
Sbjct: 2359 gatgaaaaggaaattgaaga 2378
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>gb|AC108774.10| Mus musculus chromosome 1, clone RP23-249J23, complete sequence
          Length = 236406

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   gaaaaggaaattgaagagac 184
             ||||||||||||||||||||
Sbjct: 77442 gaaaaggaaattgaagagac 77461
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>ref|XM_672636.1| Plasmodium berghei strain ANKA heat shock protein (PB000957.03.0)
            partial mRNA
          Length = 2142

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 474  atgaatgctatccgtataaggaaggaaaaccaagtttatagtgc 517
            |||||||| || ||||| || || ||||| ||||||||||||||
Sbjct: 1963 atgaatgcaatacgtatgagaaaagaaaatcaagtttatagtgc 2006
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>gb|AC117573.9| Mus musculus chromosome 3, clone RP23-30D1, complete sequence
          Length = 239439

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    gagtttggatgttcctctga 25
            ||||||||||||||||||||
Sbjct: 2200 gagtttggatgttcctctga 2219
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>emb|AL590815.5| Human DNA sequence from clone RP11-492M21 on chromosome 6, complete
             sequence
          Length = 18703

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   gcaattaagttcaaggaaat 229
             ||||||||||||||||||||
Sbjct: 15337 gcaattaagttcaaggaaat 15318
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>gb|AC109322.16| Homo sapiens chromosome 8, clone CTD-3065J16, complete sequence
          Length = 215342

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 493   ggaaggaaaaccaagtttatagtg 516
             ||||||||||||||||||| ||||
Sbjct: 62170 ggaaggaaaaccaagtttagagtg 62193
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>gb|AC100183.11| Mus musculus chromosome 3, clone RP23-54L16, complete sequence
          Length = 231917

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 499   aaaaccaagtttatagtgca 518
             ||||||||||||||||||||
Sbjct: 53257 aaaaccaagtttatagtgca 53276
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>gb|AF411808.1| Lycopersicon esculentum BAC clone Clemson_Id 62O11, complete sequence
          Length = 70347

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 508   tttatagtgcagaggataag 527
             ||||||||||||||||||||
Sbjct: 38258 tttatagtgcagaggataag 38239
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>gb|AC165189.4| Nomascus leucogenys leucogenys clone CH271-329K4, complete sequence
          Length = 191051

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   agttcaaggaaatgcttgag 236
             ||||||||||||||||||||
Sbjct: 75742 agttcaaggaaatgcttgag 75761
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>gb|AC135614.15| Pan troglodytes clone rp43-3m22, complete sequence
          Length = 118935

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 392    tggtgaggttggtctttctgcgga 415
              ||||||||||||| ||||||||||
Sbjct: 110323 tggtgaggttggtatttctgcgga 110346
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>gb|AC006946.20| Homo sapiens Chromosome 22q11 Pac Clone p109l3 in CES region, complete
             sequence
          Length = 193159

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 392   tggtgaggttggtctttctgcgga 415
             ||||||||||||| ||||||||||
Sbjct: 54020 tggtgaggttggtatttctgcgga 54043
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>gb|AC104840.2| Homo sapiens BAC clone RP11-10E9 from 4, complete sequence
          Length = 159946

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 553   aggagaagtcaaagagagag 572
             ||||||||||||||||||||
Sbjct: 42761 aggagaagtcaaagagagag 42742
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>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold
          Length = 1787293

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    agttcaaggaaatgcttgag 236
              ||||||||||||||||||||
Sbjct: 381182 agttcaaggaaatgcttgag 381201
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>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold
          Length = 1825024

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    agttcaaggaaatgcttgag 236
              ||||||||||||||||||||
Sbjct: 416430 agttcaaggaaatgcttgag 416449
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>gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold
          Length = 1819346

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    agttcaaggaaatgcttgag 236
              ||||||||||||||||||||
Sbjct: 353177 agttcaaggaaatgcttgag 353196
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>gb|AC087773.1|AC087773 Genomic Sequence For Lycopersicon esculentum Clone T62O11, complete
             sequence
          Length = 70497

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 508   tttatagtgcagaggataag 527
             ||||||||||||||||||||
Sbjct: 38258 tttatagtgcagaggataag 38239
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>dbj|AB190773.1| Mesembryanthemum crystallinum PTL1 mRNA for plastidic phosphate
            translocator-like protein1, complete cds
          Length = 1661

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 234  gaggctcagaagaaggctgc 253
            ||||||||||||||||||||
Sbjct: 1127 gaggctcagaagaaggctgc 1146
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>gb|AC018644.6|AC018644 Homo sapiens chromosome 7 clone RP11-383F6, complete sequence
          Length = 193643

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   aattaagttcaaggaaatgc 231
             ||||||||||||||||||||
Sbjct: 91869 aattaagttcaaggaaatgc 91888
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>gb|AC002080.1|AC002080 Human BAC clone CTA-253B13 from 7q31-q32, complete sequence
          Length = 171905

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  agttcaaggaaatgcttgag 236
            ||||||||||||||||||||
Sbjct: 9672 agttcaaggaaatgcttgag 9691
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>gb|AF125348.1|AF125348 Homo sapiens caveolin 1 (CAV1) gene, exon 3 and partial cds
          Length = 65192

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   agttcaaggaaatgcttgag 236
             ||||||||||||||||||||
Sbjct: 61975 agttcaaggaaatgcttgag 61994
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>gb|AC148246.3| Saimiri boliviensis boliviensis clone CH254-471K13, complete sequence
          Length = 177755

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    agttcaaggaaatgcttgag 236
              ||||||||||||||||||||
Sbjct: 173301 agttcaaggaaatgcttgag 173320
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 245     gaaggctgcactggagaatg 264
               ||||||||||||||||||||
Sbjct: 3996713 gaaggctgcactggagaatg 3996694
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>gb|AC154565.2| Mus musculus BAC clone RP23-403J19 from chromosome 16, complete sequence
          Length = 202981

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    aaggctgcactggagaatga 265
              ||||||||||||||||||||
Sbjct: 118141 aaggctgcactggagaatga 118160
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>emb|BX322597.3| Zebrafish DNA sequence from clone RP71-7L19 in linkage group 4, complete
              sequence
          Length = 173945

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 155    catcattgatgaaaaggaaattga 178
              ||||||||| ||||||||||||||
Sbjct: 120745 catcattgaggaaaaggaaattga 120768
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>gb|AC148187.3| Saimiri boliviensis boliviensis clone CH254-373M5, complete sequence
          Length = 180635

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  agttcaaggaaatgcttgag 236
            ||||||||||||||||||||
Sbjct: 3392 agttcaaggaaatgcttgag 3411
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>gb|AC142557.3| Cercopithecus aethiops clone CH252-402M4, complete sequence
          Length = 150854

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   agttcaaggaaatgcttgag 236
             ||||||||||||||||||||
Sbjct: 31123 agttcaaggaaatgcttgag 31142
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>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome
          Length = 1664970

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 159     attgatgaaaaggaaattgaagag 182
               ||||||||||| ||||||||||||
Sbjct: 1662349 attgatgaaaaagaaattgaagag 1662372
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>emb|BX072536.4| Mouse DNA sequence from clone RP23-5A21 on chromosome X, complete
              sequence
          Length = 246587

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 553    aggagaagtcaaagagagag 572
              ||||||||||||||||||||
Sbjct: 198898 aggagaagtcaaagagagag 198917
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>gb|AC002077.1|HSAC002077 Human cosmid clone LUCA17 from 3p21.3, complete sequence
          Length = 38682

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 516   gcagaggataagagagcactggcc 539
             ||||||||| ||||||||||||||
Sbjct: 28365 gcagaggatcagagagcactggcc 28342
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>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold
          Length = 2105003

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    agttcaaggaaatgcttgag 236
              ||||||||||||||||||||
Sbjct: 484290 agttcaaggaaatgcttgag 484309
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>gb|AC163644.4| Mus musculus BAC clone RP24-394I24 from chromosome 16, complete sequence
          Length = 177627

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 252    gcactggagaatgagatgcc 271
              ||||||||||||||||||||
Sbjct: 114027 gcactggagaatgagatgcc 114008
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>dbj|AP000549.1| Homo sapiens genomic DNA, chromosome 22q11.2, Cat Eye Syndrome region,
             clone:c1A3
          Length = 35878

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 392   tggtgaggttggtctttctgcgga 415
             ||||||||||||| ||||||||||
Sbjct: 27879 tggtgaggttggtatttctgcgga 27856


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,254,163
Number of Sequences: 3902068
Number of extensions: 6254163
Number of successful extensions: 255817
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 255196
Number of HSP's gapped (non-prelim): 620
length of query: 607
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 584
effective length of database: 17,143,297,704
effective search space: 10011685859136
effective search space used: 10011685859136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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