ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags36c18 |
|---|---|
| Clone Library Name | barley_pub |
>CDC50_YEAST (P25656) Cell division control protein 50| Length = 391 Score = 72.4 bits (176), Expect = 7e-13 Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 23/155 (14%) Frame = +1 Query: 76 PLEMEGSSNPKASNKPKYSKFTQQELPACKPLLTPGIVIAAFALIGALFVPIGLASLHAS 255 PL EG + S KP + F QQ L A +P+L+P V+ + +F PIG+ + ++ Sbjct: 12 PLTKEGPT----SKKPPNTAFRQQRLKAWQPILSPQSVLPLLIFVACIFTPIGIGLIVSA 67 Query: 256 RQVVELVHRYD-----AGCVPVDD------KVGF------------IQNSRTDKTCTITM 366 +V +L Y A +D K F +N +++C + Sbjct: 68 TKVQDLTIDYSHCDTKASTTAFEDIPKKYIKYHFKSKVENKPQWRLTENENGEQSCELQF 127 Query: 367 NVPKYMKSPIHVYYLIDGFYQNHRRYVRSRSDKQL 471 +P +K I +YY I FYQNHRRYV+S KQ+ Sbjct: 128 EIPNDIKKSIFIYYKITNFYQNHRRYVQSFDTKQI 162
>YN8S_YEAST (P53740) Hypothetical protein YNR048W| Length = 393 Score = 64.7 bits (156), Expect = 1e-10 Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 24/160 (15%) Frame = +1 Query: 82 EMEGSSNPKASNKPKYSKFTQQELPACKPLLTPGIVIAAFALIGALFVPIGLASLHASRQ 261 ++ N + S KP + F QQ L A +P+L+P V+ L+ +F PIG+ + ++ Sbjct: 12 QLSSKQNAQKSRKPANTSFRQQRLKAWQPILSPQSVLPLLILMACVFAPIGIGLVVSTIS 71 Query: 262 VVELVHRY-DAGCVPVDDKVGFIQNSRTD-----------------------KTCTITMN 369 V LV Y + + I + D +TC I Sbjct: 72 VQRLVVNYTECDALAPAKHFETIPSEYVDYHFSKKVAVQPQWMVLTDPELGNQTCRIQFE 131 Query: 370 VPKYMKSPIHVYYLIDGFYQNHRRYVRSRSDKQLRYKSAV 489 VP ++K +VYY + F QN+R YV+S QL+ K+ + Sbjct: 132 VPNHIKKSTYVYYRLTNFNQNYREYVQSLDLDQLKGKALI 171
>LEM3_YEAST (P42838) Alkylphosphocholine resistance protein LEM3 (Ro-sensitive| 3) Length = 414 Score = 62.8 bits (151), Expect = 6e-10 Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 31/156 (19%) Frame = +1 Query: 112 SNKPKYSKFTQQELPACKPLLTPGIVIAAFALIGALFVPIGLASLHASRQVVELV----- 276 + +PK FTQQ L A P+LTP V+ + LI +FV +G L + +V E+ Sbjct: 50 NRRPKEDAFTQQRLAAINPVLTPRTVLPLYLLIAVVFVIVGGCILAQNSKVDEVTIYYQD 109 Query: 277 ---------------------HRYDA-GCVP----VDDKVGFIQNSRTDKTCTITMNVPK 378 H+Y P VDD+ R TC I P Sbjct: 110 CMTNATSSWSDIPSEHWQFVFHKYKTYNTAPQWRFVDDESDDFTKQRG--TCQIRFTTPS 167 Query: 379 YMKSPIHVYYLIDGFYQNHRRYVRSRSDKQLRYKSA 486 MK+ +++ Y+++ F NHRRYV S S+ Q+R + A Sbjct: 168 DMKNNVYLNYVLEKFAANHRRYVLSFSEDQIRGEDA 203
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 36.6 bits (83), Expect = 0.042 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +3 Query: 183 NCHCCLCAHRRPVCSHRACVSACVTTG 263 +C+ C C +RR CSHR C+ CV G Sbjct: 874 DCNTCTCRNRRWECSHRLCLGTCVAYG 900
>VWF_CANFA (Q28295) Von Willebrand factor precursor (vWF)| Length = 2813 Score = 36.2 bits (82), Expect = 0.055 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +3 Query: 132 QVYTAGASSMQATTDTWNCHCCLCAHRRPVCSHRACVSACVTTG 263 Q Y GAS +Q +CH C+C + +CS+ C C+ TG Sbjct: 355 QRYPPGASLLQ------DCHTCICRNSLWICSNEECPGECLVTG 392
>VWF_MOUSE (Q8CIZ8) Von Willebrand factor precursor (vWF) [Contains: Von| Willebrand antigen II] Length = 2813 Score = 32.3 bits (72), Expect = 0.80 Identities = 16/63 (25%), Positives = 28/63 (44%) Frame = +3 Query: 75 SSGDGRQLEPKGVQQAQVFQVYTAGASSMQATTDTWNCHCCLCAHRRPVCSHRACVSACV 254 S +G L+ Q+ AG T+ + +C+ C+C + +CS+ C C+ Sbjct: 330 SCPEGELLDEDRCVQSSDCPCVHAGKRYPPGTSLSQDCNTCICRNSLWICSNEECPGECL 389 Query: 255 TTG 263 TG Sbjct: 390 VTG 392
>VWF_PIG (Q28833) Von Willebrand factor precursor (vWF) (Fragment)| Length = 2482 Score = 32.0 bits (71), Expect = 1.0 Identities = 18/60 (30%), Positives = 27/60 (45%) Frame = +3 Query: 84 DGRQLEPKGVQQAQVFQVYTAGASSMQATTDTWNCHCCLCAHRRPVCSHRACVSACVTTG 263 DGR +E + Y GAS + +C+ C+C + VCS+ C C+ TG Sbjct: 13 DGRCVESAECSCVHSGKRYPPGASLSR------DCNTCICRNSLWVCSNEDCPGECLVTG 66
>VWF_BOVIN (P80012) Von Willebrand factor precursor (vWF) (Fragment)| Length = 937 Score = 32.0 bits (71), Expect = 1.0 Identities = 17/60 (28%), Positives = 28/60 (46%) Frame = +3 Query: 84 DGRQLEPKGVQQAQVFQVYTAGASSMQATTDTWNCHCCLCAHRRPVCSHRACVSACVTTG 263 +GR +E + Y GAS + +C+ C+C + + VCS+ C C+ TG Sbjct: 338 EGRCVESTECPCVHAGKPYPPGASLSR------DCNTCICRNSQWVCSNEDCPGECLITG 391
>VWF_HUMAN (P04275) Von Willebrand factor precursor (vWF) [Contains: Von| Willebrand antigen II] Length = 2813 Score = 31.2 bits (69), Expect = 1.8 Identities = 9/27 (33%), Positives = 17/27 (62%) Frame = +3 Query: 183 NCHCCLCAHRRPVCSHRACVSACVTTG 263 +C+ C+C + + +CS+ C C+ TG Sbjct: 366 DCNTCICRNSQWICSNEECPGECLVTG 392
>PROP_HUMAN (P27918) Properdin precursor (Factor P)| Length = 469 Score = 30.4 bits (67), Expect = 3.0 Identities = 10/25 (40%), Positives = 13/25 (52%) Frame = -2 Query: 133 WNTWACWTPLGSSCLPSPEDTSRSR 59 W TW WTP +SC P + +R Sbjct: 196 WATWGPWTPCSASCHGGPHEPKETR 220
>TRI10_PANTR (Q7YR32) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 481 Score = 29.6 bits (65), Expect = 5.2 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Frame = +3 Query: 144 AGASSMQATTDTWNCHCCLCAHRRPV---CSHRACVSACVTTGC 266 A A+S+ + D NC C R PV C H C AC+T C Sbjct: 2 ASAASVTSLADEVNCPICQGTLREPVTIDCGHNFC-RACLTRYC 44
>TRI10_HUMAN (Q9UDY6) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 481 Score = 29.6 bits (65), Expect = 5.2 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Frame = +3 Query: 144 AGASSMQATTDTWNCHCCLCAHRRPV---CSHRACVSACVTTGC 266 A A+S+ + D NC C R PV C H C AC+T C Sbjct: 2 ASAASVTSLADEVNCPICQGTLREPVTIDCGHNFC-RACLTRYC 44
>FOLT1_CAEEL (Q17766) Folate-like transporter 1| Length = 360 Score = 29.6 bits (65), Expect = 5.2 Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 4/81 (4%) Frame = -3 Query: 498 YQMYSALIPQLFVTSTSHIPSMVLIEAVNQVIDVDWALHVF----WHIHCYSACLVSPGV 331 Y ALIP +T +V+IEA+ V WAL VF W + VS GV Sbjct: 52 YSYMLALIPMFILTDILRYKPIVMIEAIGLV--ATWALLVFGKGVWQMQIMQ---VSFGV 106 Query: 330 LDEPNLVIHGHTTSIISMHQF 268 + + + SI+ + Sbjct: 107 ASAAEIAYYSYIYSIVDRKHY 127
>LEPR_HUMAN (P48357) Leptin receptor precursor (LEP-R) (OB receptor) (OB-R)| (HuB219) (CD295 antigen) Length = 1165 Score = 29.6 bits (65), Expect = 5.2 Identities = 14/53 (26%), Positives = 26/53 (49%) Frame = +1 Query: 67 AMYPLEMEGSSNPKASNKPKYSKFTQQELPACKPLLTPGIVIAAFALIGALFV 225 ++YP+ MEG PK N + + A ++ P I+ ++ L+G L + Sbjct: 810 SLYPIFMEGVGKPKIINSFTQDDIEKHQSDAGLYVIVPVIISSSILLLGTLLI 862
>APOH_HUMAN (P02749) Beta-2-glycoprotein 1 precursor (Beta-2-glycoprotein I)| (Apolipoprotein H) (Apo-H) (B2GPI) (Beta(2)GPI) (Activated protein C-binding protein) (APC inhibitor) (Anticardiolipin cofactor) Length = 345 Score = 29.3 bits (64), Expect = 6.8 Identities = 18/67 (26%), Positives = 31/67 (46%) Frame = +1 Query: 85 MEGSSNPKASNKPKYSKFTQQELPACKPLLTPGIVIAAFALIGALFVPIGLASLHASRQV 264 + G+ + K + + K+S ELP C P++ P I FA + G SL+ V Sbjct: 116 LNGADSAKCTEEGKWSP----ELPVCAPIICPPPSIPTFATLRVYKPSAGNNSLYRDTAV 171 Query: 265 VELVHRY 285 E + ++ Sbjct: 172 FECLPQH 178
>GATA6_CHICK (P43693) Transcription factor GATA-6 (GATA-binding factor 6)| Length = 387 Score = 29.3 bits (64), Expect = 6.8 Identities = 20/64 (31%), Positives = 31/64 (48%) Frame = -1 Query: 311 SSTGTQPASYLCTSSTTCRDACRDASPMGTNRAPMSAKAAMTIPGVSSGLHAGSSCCVNL 132 +ST P + TSST D ++ASP A ++ + M+ PG S+ + NL Sbjct: 298 NSTTAVPMTPTSTSSTNSDDCSKNASPSTQPAASGASSSVMSGPGESTSPESS-----NL 352 Query: 131 EYLG 120 +Y G Sbjct: 353 KYSG 356
>IREB2_HUMAN (P48200) Iron-responsive element-binding protein 2 (IRE-BP 2) (Iron| regulatory protein 2) (IRP2) Length = 963 Score = 29.3 bits (64), Expect = 6.8 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -1 Query: 314 LSSTGTQPASYLCTSSTTCRDACRDASPMGTNRAPMSAKAAMT 186 LS QP C TTCR +C D+ +G N S++ T Sbjct: 156 LSPLKVQPKKLPCRGQTTCRGSC-DSGELGRNSGTFSSQIENT 197
>KRA45_HUMAN (Q9BYR2) Keratin-associated protein 4-5 (Keratin-associated protein| 4.5) (Ultrahigh sulfur keratin-associated protein 4.5) Length = 186 Score = 29.3 bits (64), Expect = 6.8 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 9/38 (23%) Frame = +3 Query: 186 CH--CCLCAHRRPVCSHRACV-------SACVTTGCRT 272 CH CC+ + RP C +C S C TT CRT Sbjct: 56 CHPSCCISSCCRPYCCESSCCRPCCCRPSCCQTTCCRT 93
>PP1R8_MOUSE (Q8R3G1) Nuclear inhibitor of protein phosphatase 1 (NIPP-1)| (Protein phosphatase 1 regulatory inhibitor subunit 8) Length = 351 Score = 29.3 bits (64), Expect = 6.8 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +1 Query: 67 AMYPLEMEGSSNPKASNKPKYSKFTQQELPACKPLLTPGIVI 192 A+ P NP+A N+PK K+ ++ P KP TP ++I Sbjct: 312 AINPTPNPAVYNPEAVNEPKKKKYAKEAWPGKKP--TPSLLI 351
>PP1R8_HUMAN (Q12972) Nuclear inhibitor of protein phosphatase 1 (NIPP-1)| (Protein phosphatase 1 regulatory inhibitor subunit 8) [Includes: Activator of RNA decay (EC 3.1.4.-) (ARD-1)] Length = 351 Score = 29.3 bits (64), Expect = 6.8 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +1 Query: 70 MYPLEMEGSSNPKASNKPKYSKFTQQELPACKPLLTPGIVI 192 M P NP+A N+PK K+ ++ P KP TP ++I Sbjct: 313 MNPAPNPAVYNPEAVNEPKKKKYAKEAWPGKKP--TPSLLI 351
>PP1R8_BOVIN (Q28147) Nuclear inhibitor of protein phosphatase 1 (NIPP-1)| (Protein phosphatase 1, regulatory inhibitor subunit 8) Length = 351 Score = 29.3 bits (64), Expect = 6.8 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +1 Query: 70 MYPLEMEGSSNPKASNKPKYSKFTQQELPACKPLLTPGIVI 192 M P NP+A N+PK K+ ++ P KP TP ++I Sbjct: 313 MNPAPNPAVYNPEAVNEPKKKKYAKEAWPGKKP--TPSLLI 351
>DHE2_ACHKL (P41755) NAD-specific glutamate dehydrogenase (EC 1.4.1.2)| (NAD-GDH) Length = 1063 Score = 29.3 bits (64), Expect = 6.8 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 9/50 (18%) Frame = -2 Query: 505 NPISNVQRSYTAV---------VCHFDFSHTFDGFDRSRQSGNRRGLGSS 383 N + N+ S+T V FDF H FD F++S G G+ SS Sbjct: 270 NILDNISSSFTLQSNRVRPRPDVAGFDFFHRFDAFEQSLTYGGDTGITSS 319
>LEPR_RAT (Q62959) Leptin receptor precursor (LEP-R) (OB receptor) (OB-R)| (CD295 antigen) Length = 1162 Score = 28.9 bits (63), Expect = 8.9 Identities = 15/53 (28%), Positives = 26/53 (49%) Frame = +1 Query: 67 AMYPLEMEGSSNPKASNKPKYSKFTQQELPACKPLLTPGIVIAAFALIGALFV 225 ++YP+ MEG PK N +Q+ A ++ P I+ + L+G L + Sbjct: 808 SLYPVFMEGVGKPKIINGFTKDDIAKQQNDAGLYVIVPIIISSCVLLLGTLLI 860
>LEPR_MACMU (Q9MYL0) Leptin receptor precursor (LEP-R) (OB receptor) (OB-R)| (CD295 antigen) Length = 1163 Score = 28.9 bits (63), Expect = 8.9 Identities = 14/53 (26%), Positives = 26/53 (49%) Frame = +1 Query: 67 AMYPLEMEGSSNPKASNKPKYSKFTQQELPACKPLLTPGIVIAAFALIGALFV 225 ++YP+ MEG PK N + + A ++ P I+ ++ L+G L + Sbjct: 808 SLYPIFMEGVGKPKIINSFAQDNTEKHQNDAGLYVIVPVIISSSILLLGTLLI 860
>DLL1_HUMAN (O00548) Delta-like protein 1 precursor (Drosophila Delta homolog| 1) (Delta1) (H-Delta-1) Length = 723 Score = 28.9 bits (63), Expect = 8.9 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -2 Query: 394 LGSSCILAHSLL*CMSCQSWSSG 326 +GS C LA ++L + CQ WSSG Sbjct: 1 MGSRCALALAVLSALLCQVWSSG 23 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,578,046 Number of Sequences: 219361 Number of extensions: 1680731 Number of successful extensions: 6027 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 5657 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6021 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
