ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags36c18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK110743.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 4e-35
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 82 2e-12
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
4gb|AC118980.2| Oryza sativa (japonica cultivar-group) chromosome... 82 2e-12
5ref|XM_464311.1| Oryza sativa (japonica cultivar-group), mRNA 76 1e-10
6dbj|AK069063.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
7ref|NM_104310.2| Arabidopsis thaliana unknown protein AT1G54320 ... 72 2e-09
8ref|XM_475734.1| Oryza sativa (japonica cultivar-group), predic... 72 2e-09
9gb|AF446869.1|AF446869 Arabidopsis thaliana At1g54320/F20D21_50 ... 72 2e-09
10gb|AY053406.1| Arabidopsis thaliana At1g54320/F20D21_50 mRNA, co... 72 2e-09
11gb|AY045672.1| Arabidopsis thaliana At1g54320/F20D21_50 mRNA, co... 72 2e-09
12emb|BX816934.1|CNS0AD21 Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
13dbj|AB185449.1| Lotus japonicus Lj-CDC50 like 1 mRNA for hypothe... 72 2e-09
14gb|AC005287.4| Arabidopsis thaliana chromosome I BAC F20D21 geno... 58 3e-05
15dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
16dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
17ref|NM_148189.2| Arabidopsis thaliana ATP binding / MAP kinase/ ... 52 0.002
18gb|BT010713.1| Arabidopsis thaliana At4g01595 mRNA, complete cds 52 0.002
19emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, c... 52 0.002
20dbj|AK118227.1| Arabidopsis thaliana mRNA, clone: RAFL19-54-E16 52 0.002
21gb|AF104919.1|T15B16 Arabidopsis thaliana BAC T15B16 52 0.002
22dbj|AK104873.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
23dbj|AK069711.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
24ref|NM_112110.2| Arabidopsis thaliana unknown protein AT3G12740 ... 48 0.029
25gb|AY091210.1| Arabidopsis thaliana unknown protein (At3g12740) ... 48 0.029
26gb|AY045904.1| Arabidopsis thaliana unknown protein (At3g12740) ... 48 0.029
27gb|AF410309.1|AF410309 Arabidopsis thaliana AT3g12740/MBK21_10 m... 48 0.029
28emb|BX823286.1|CNS0A5GM Arabidopsis thaliana Full-length cDNA Co... 48 0.029
29gb|AY087607.1| Arabidopsis thaliana clone 37019 mRNA, complete s... 48 0.029
30ref|NM_101502.2| Arabidopsis thaliana unknown protein AT1G16360 ... 44 0.45
31ref|NM_106593.2| Arabidopsis thaliana unknown protein AT1G79450 ... 44 0.45
32ref|NM_202446.1| Arabidopsis thaliana unknown protein AT1G79450 ... 44 0.45
33gb|AF353999.1|AF353999 Mesostigma viride mitochondrion, complete... 44 0.45
34emb|BX816946.1|CNS0ABMZ Arabidopsis thaliana Full-length cDNA Co... 44 0.45
35emb|BX818357.1|CNS0AB02 Arabidopsis thaliana Full-length cDNA Co... 44 0.45
36emb|BX816943.1|CNS0AAHG Arabidopsis thaliana Full-length cDNA Co... 44 0.45
37gb|AC007202.3|T8K14 Arabidopsis thaliana chromosome 1 BAC T8K14 ... 44 0.45
38gb|AY088777.1| Arabidopsis thaliana clone 94828 mRNA, complete s... 44 0.45
39dbj|AK175330.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 44 0.45
40gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
41dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 1.8
42dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
43gb|AC006341.2|F3O9 Arabidopsis thaliana chromosome 1 BAC F3O9 se... 42 1.8
44gb|AF285443.4| Homo sapiens chromosome 8 clone SCb-449o20 map p2... 40 7.0
45gb|AF202031.5| Homo sapiens chromosome 8 clone SCb-497j4 map p23... 40 7.0
46gb|AF189745.6| Homo sapiens chromosome 8 clone SCb-324n11 map p2... 40 7.0
47gb|AC145378.2| Pan troglodytes BAC clone RP43-56P12 from 7, comp... 40 7.0
48gb|AC108797.8| Mus musculus chromosome 3, clone RP23-349M18, com... 40 7.0
49gb|AC003986.2| Homo sapiens BAC clone CTA-370M10 from 7, complet... 40 7.0
50gb|AC144950.1| Homo sapiens chromosome 8 clone RP11-191L23 map p... 40 7.0
51gb|AC084121.13| Homo sapiens chromosome 8, clone RP11-623J22, co... 40 7.0
52emb|AL596103.22| Mouse DNA sequence from clone RP23-309E16 on ch... 40 7.0
53gb|AC099755.2| Homo sapiens chromosome 1 clone RP11-434N15, comp... 40 7.0
54gb|AC096636.1| Homo sapiens chromosome 1 clone RP11-75I2, comple... 40 7.0
55gb|AC154373.2| Mus musculus BAC clone RP23-79I18 from chromosome... 40 7.0
56gb|AC134684.5| Homo sapiens chromosome 8, clone RP11-1118M6, com... 40 7.0
57gb|AC130367.12| Homo sapiens chromosome 8, clone RP11-1322A13, c... 40 7.0
58gb|AC134683.9| Homo sapiens chromosome 8, clone RP11-1175L4, com... 40 7.0
59gb|AC134395.7| Homo sapiens chromosome 8, clone RP11-739E3, comp... 40 7.0
60emb|AL133246.3|CNS01DUJ BAC sequence from the SPG4 candidate reg... 40 7.0 
>dbj|AK110743.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-F10, full
           insert sequence
          Length = 1434

 Score =  157 bits (79), Expect = 4e-35
 Identities = 148/171 (86%)
 Strand = Plus / Plus

                                                                       
Query: 309 tgacaaggttgggttcatccagaactccaggactgacaagacatgcactataacaatgaa 368
           |||||||||||||||||| |||||| ||   ||||||||||||||||| | |||| ||| 
Sbjct: 401 tgacaaggttgggttcattcagaacaccgatactgacaagacatgcacaagaacactgac 460

                                                                       
Query: 369 tgtgccaaaatacatgaagagcccaatccacgtctattacctgattgacggcttctatca 428
           |||||| ||| | |||||||||||||||||  | ||||||| ||| | || |||||||||
Sbjct: 461 tgtgcctaaacatatgaagagcccaatccagatatattaccagatcggcgacttctatca 520

                                                              
Query: 429 aaaccatcgaaggtatgtgagaagtcgaagtgacaaacaactgcggtataa 479
           |||||||||| ||||||||| |||||||||||| |||||| ||||||||||
Sbjct: 521 aaaccatcgacggtatgtgaaaagtcgaagtgataaacaattgcggtataa 571



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                       
Query: 118 aagcccaagtattccaagtttacacagcaggagcttccagcatgcaagccactactgaca 177
           |||||||| ||||| |||||||| || ||||||||||||||||||||||||||||| || 
Sbjct: 210 aagcccaaatattctaagtttacgcaacaggagcttccagcatgcaagccactactaact 269

                      
Query: 178 cctggaattgt 188
           |||||||||||
Sbjct: 270 cctggaattgt 280
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                           
Query: 128     attccaagtttacacagcaggagcttccagcatgcaagccactactgacacctggaattg 187
               |||| |||||||| || ||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 1085442 attctaagtttacgcaacaggagcttccagcatgcaagccactactaactcctggaattg 1085383

                
Query: 188     t 188
               |
Sbjct: 1085382 t 1085382



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                           
Query: 439     aggtatgtgagaagtcgaagtgacaaacaactgcggtataagagcgctgtacatttgata 498
               |||||||||| |||||||||||| |||||| ||||||||||||  ||||| || |||| |
Sbjct: 1084554 aggtatgtgaaaagtcgaagtgataaacaattgcggtataagaatgctgtgcacttgaca 1084495

                                   
Query: 499     tcggattgtgtgcctgaagg 518
                 ||||||||  ||||||||
Sbjct: 1084494 aaggattgtgatcctgaagg 1084475



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                           
Query: 382     atgaagagcccaatccacgtctattacctgattgacggcttctatcaaaaccatcgaagg 441
               |||||||||||||||||  | ||||||| ||| | || ||||||||||||||||||| ||
Sbjct: 1084852 atgaagagcccaatccagatatattaccagatcggcgacttctatcaaaaccatcgacgg 1084793

                 
Query: 442     ta 443
               ||
Sbjct: 1084792 ta 1084791



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                               
Query: 309     tgacaaggttgggttcatccagaactccaggactgacaagacatgcac 356
               |||||||||||||||||| |||||| ||   |||||||||||||||||
Sbjct: 1085070 tgacaaggttgggttcattcagaacaccgatactgacaagacatgcac 1085023
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                           
Query: 128     attccaagtttacacagcaggagcttccagcatgcaagccactactgacacctggaattg 187
               |||| |||||||| || ||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 1085440 attctaagtttacgcaacaggagcttccagcatgcaagccactactaactcctggaattg 1085381

                
Query: 188     t 188
               |
Sbjct: 1085380 t 1085380



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                           
Query: 439     aggtatgtgagaagtcgaagtgacaaacaactgcggtataagagcgctgtacatttgata 498
               |||||||||| |||||||||||| |||||| ||||||||||||  ||||| || |||| |
Sbjct: 1084552 aggtatgtgaaaagtcgaagtgataaacaattgcggtataagaatgctgtgcacttgaca 1084493

                                   
Query: 499     tcggattgtgtgcctgaagg 518
                 ||||||||  ||||||||
Sbjct: 1084492 aaggattgtgatcctgaagg 1084473



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                           
Query: 382     atgaagagcccaatccacgtctattacctgattgacggcttctatcaaaaccatcgaagg 441
               |||||||||||||||||  | ||||||| ||| | || ||||||||||||||||||| ||
Sbjct: 1084850 atgaagagcccaatccagatatattaccagatcggcgacttctatcaaaaccatcgacgg 1084791

                 
Query: 442     ta 443
               ||
Sbjct: 1084790 ta 1084789



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                               
Query: 309     tgacaaggttgggttcatccagaactccaggactgacaagacatgcac 356
               |||||||||||||||||| |||||| ||   |||||||||||||||||
Sbjct: 1085068 tgacaaggttgggttcattcagaacaccgatactgacaagacatgcac 1085021
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>gb|AC118980.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1263H11,
              complete sequence
          Length = 126827

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                          
Query: 128    attccaagtttacacagcaggagcttccagcatgcaagccactactgacacctggaattg 187
              |||| |||||||| || ||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 105657 attctaagtttacgcaacaggagcttccagcatgcaagccactactaactcctggaattg 105598

               
Query: 188    t 188
              |
Sbjct: 105597 t 105597



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                          
Query: 439    aggtatgtgagaagtcgaagtgacaaacaactgcggtataagagcgctgtacatttgata 498
              |||||||||| |||||||||||| |||||| ||||||||||||  ||||| || |||| |
Sbjct: 104769 aggtatgtgaaaagtcgaagtgataaacaattgcggtataagaatgctgtgcacttgaca 104710

                                  
Query: 499    tcggattgtgtgcctgaagg 518
                ||||||||  ||||||||
Sbjct: 104709 aaggattgtgatcctgaagg 104690



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                          
Query: 382    atgaagagcccaatccacgtctattacctgattgacggcttctatcaaaaccatcgaagg 441
              |||||||||||||||||  | ||||||| ||| | || ||||||||||||||||||| ||
Sbjct: 105067 atgaagagcccaatccagatatattaccagatcggcgacttctatcaaaaccatcgacgg 105008

                
Query: 442    ta 443
              ||
Sbjct: 105007 ta 105006



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                              
Query: 309    tgacaaggttgggttcatccagaactccaggactgacaagacatgcac 356
              |||||||||||||||||| |||||| ||   |||||||||||||||||
Sbjct: 105285 tgacaaggttgggttcattcagaacaccgatactgacaagacatgcac 105238
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>ref|XM_464311.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1707

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                             
Query: 118 aagcccaagtattccaagtttacacagcaggagcttccagcatgcaagcc 167
           ||||||||||||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 479 aagcccaagtattccaagtttactcagcaggagctcccagcttgcaagcc 528
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>dbj|AK069063.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007B15, full
           insert sequence
          Length = 1707

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                             
Query: 118 aagcccaagtattccaagtttacacagcaggagcttccagcatgcaagcc 167
           ||||||||||||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 479 aagcccaagtattccaagtttactcagcaggagctcccagcttgcaagcc 528
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>ref|NM_104310.2| Arabidopsis thaliana unknown protein AT1G54320 mRNA, complete cds
          Length = 1411

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 121 cccaagtattccaagtttacacagcaggagcttccagcatgcaagcca 168
           ||||||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 246 cccaagtattcgaagttcacacagcaggagcttccagcttgcaagcca 293
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>ref|XM_475734.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1038

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                       
Query: 118 aagcccaagtattccaagtttacacagcaggagcttccagcatgcaagccactactgaca 177
           |||||||||||||| ||||| || |||||||||||||| ||||| || ||||||   || 
Sbjct: 64  aagcccaagtattctaagttcacgcagcaggagcttccggcatggaaaccactatatact 123

                                               
Query: 178 cctggaattgtcattgctgcctttgcgctcatcggc 213
           |||||||||||||| |  |||||  |||||||||||
Sbjct: 124 cctggaattgtcatcggggccttctcgctcatcggc 159
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>gb|AF446869.1|AF446869 Arabidopsis thaliana At1g54320/F20D21_50 mRNA, complete cds
          Length = 1050

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 121 cccaagtattccaagtttacacagcaggagcttccagcatgcaagcca 168
           ||||||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 82  cccaagtattcgaagttcacacagcaggagcttccagcttgcaagcca 129
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>gb|AY053406.1| Arabidopsis thaliana At1g54320/F20D21_50 mRNA, complete cds
          Length = 1388

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 121 cccaagtattccaagtttacacagcaggagcttccagcatgcaagcca 168
           ||||||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 223 cccaagtattcgaagttcacacagcaggagcttccagcttgcaagcca 270
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>gb|AY045672.1| Arabidopsis thaliana At1g54320/F20D21_50 mRNA, complete cds
          Length = 1324

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 121 cccaagtattccaagtttacacagcaggagcttccagcatgcaagcca 168
           ||||||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 246 cccaagtattcgaagttcacacagcaggagcttccagcttgcaagcca 293
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>emb|BX816934.1|CNS0AD21 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH77ZF01 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1342

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 121 cccaagtattccaagtttacacagcaggagcttccagcatgcaagcca 168
           ||||||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 226 cccaagtattcgaagttcacacagcaggagcttccagcttgcaagcca 273
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>dbj|AB185449.1| Lotus japonicus Lj-CDC50 like 1 mRNA for hypothetical protein,
           complete cds
          Length = 1458

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 121 cccaagtattccaagtttacacagcaggagcttccagcatgcaagcca 168
           ||||||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 252 cccaagtattcaaagtttacacagcaagaacttccagcatgcaagcca 299
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>gb|AC005287.4| Arabidopsis thaliana chromosome I BAC F20D21 genomic sequence, complete
             sequence
          Length = 143186

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                      
Query: 128   attccaagtttacacagcaggagcttccagcatgcaagcca 168
             |||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 48960 attcgaagttcacacagcaggagcttccagcttgcaagcca 48920
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                       
Query: 128     attccaagtttacacagcaggagcttccagcatgcaagcc 167
               ||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 4041405 attccaagtttactcagcaggagctcccagcttgcaagcc 4041366
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>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0073A21
          Length = 170051

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                     
Query: 128   attccaagtttacacagcaggagcttccagcatgcaagcc 167
             ||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 88071 attccaagtttactcagcaggagctcccagcttgcaagcc 88032
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>ref|NM_148189.2| Arabidopsis thaliana ATP binding / MAP kinase/ protein kinase
           AT4G01595 mRNA, complete cds
          Length = 762

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 127 tattccaagtttacacagcaggagcttccagcatgcaa 164
           ||||| || ||||||||||||||||||||||| |||||
Sbjct: 639 tattcgaaatttacacagcaggagcttccagcttgcaa 602
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>gb|BT010713.1| Arabidopsis thaliana At4g01595 mRNA, complete cds
          Length = 762

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 127 tattccaagtttacacagcaggagcttccagcatgcaa 164
           ||||| || ||||||||||||||||||||||| |||||
Sbjct: 639 tattcgaaatttacacagcaggagcttccagcttgcaa 602
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>emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 4
          Length = 198697

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                    
Query: 127    tattccaagtttacacagcaggagcttccagcatgcaa 164
              ||||| || ||||||||||||||||||||||| |||||
Sbjct: 113414 tattcgaaatttacacagcaggagcttccagcttgcaa 113451
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>dbj|AK118227.1| Arabidopsis thaliana mRNA, clone: RAFL19-54-E16
          Length = 1275

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 127 tattccaagtttacacagcaggagcttccagcatgcaa 164
           ||||| || ||||||||||||||||||||||| |||||
Sbjct: 140 tattcgaaatttacacagcaggagcttccagcttgcaa 177
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>gb|AF104919.1|T15B16 Arabidopsis thaliana BAC T15B16
          Length = 90596

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 127   tattccaagtttacacagcaggagcttccagcatgcaa 164
             ||||| || ||||||||||||||||||||||| |||||
Sbjct: 80559 tattcgaaatttacacagcaggagcttccagcttgcaa 80522
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>dbj|AK104873.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-C04, full
           insert sequence
          Length = 1551

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 120 gcccaagtattccaagtttacacagcaggagct 152
           |||||||||||||||||| || |||||||||||
Sbjct: 304 gcccaagtattccaagttcacgcagcaggagct 336
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>dbj|AK069711.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023033B12, full
           insert sequence
          Length = 1575

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 120 gcccaagtattccaagtttacacagcaggagct 152
           |||||||||||||||||| || |||||||||||
Sbjct: 368 gcccaagtattccaagttcacgcagcaggagct 400
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>ref|NM_112110.2| Arabidopsis thaliana unknown protein AT3G12740 mRNA, complete cds
          Length = 1759

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 121 cccaagtattccaagtttacacagcaggagcttccagcatgcaa 164
           ||||||||||| || ||||| |||||||||||||| || |||||
Sbjct: 309 cccaagtattcgaaatttactcagcaggagcttcctgcttgcaa 352
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>gb|AY091210.1| Arabidopsis thaliana unknown protein (At3g12740) mRNA, complete cds
          Length = 1084

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 121 cccaagtattccaagtttacacagcaggagcttccagcatgcaa 164
           ||||||||||| || ||||| |||||||||||||| || |||||
Sbjct: 85  cccaagtattcgaaatttactcagcaggagcttcctgcttgcaa 128
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>gb|AY045904.1| Arabidopsis thaliana unknown protein (At3g12740) mRNA, complete cds
          Length = 1418

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 121 cccaagtattccaagtttacacagcaggagcttccagcatgcaa 164
           ||||||||||| || ||||| |||||||||||||| || |||||
Sbjct: 220 cccaagtattcgaaatttactcagcaggagcttcctgcttgcaa 263
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>gb|AF410309.1|AF410309 Arabidopsis thaliana AT3g12740/MBK21_10 mRNA, complete cds
          Length = 1283

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 121 cccaagtattccaagtttacacagcaggagcttccagcatgcaa 164
           ||||||||||| || ||||| |||||||||||||| || |||||
Sbjct: 144 cccaagtattcgaaatttactcagcaggagcttcctgcttgcaa 187
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>emb|BX823286.1|CNS0A5GM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS1ZE07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1341

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 121 cccaagtattccaagtttacacagcaggagcttccagcatgcaa 164
           ||||||||||| || ||||| |||||||||||||| || |||||
Sbjct: 234 cccaagtattcgaaatttactcagcaggagcttcctgcttgcaa 277
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>gb|AY087607.1| Arabidopsis thaliana clone 37019 mRNA, complete sequence
          Length = 1442

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 121 cccaagtattccaagtttacacagcaggagcttccagcatgcaa 164
           ||||||||||| || ||||| |||||||||||||| || |||||
Sbjct: 309 cccaagtattcgaaatttactcagcaggagcttcctgcttgcaa 352
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>ref|NM_101502.2| Arabidopsis thaliana unknown protein AT1G16360 mRNA, complete cds
          Length = 1011

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 427 caaaaccatcgaaggtatgtgagaagtcga 456
           |||||||||||| ||||||||| |||||||
Sbjct: 352 caaaaccatcgacggtatgtgaaaagtcga 381



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 136 tttacacagcaggagcttccagcatgcaa 164
           ||||| || ||||||||||||||||||||
Sbjct: 55  tttacccaacaggagcttccagcatgcaa 83
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>ref|NM_106593.2| Arabidopsis thaliana unknown protein AT1G79450 transcript variant
           AT1G79450.1 mRNA, complete cds
          Length = 1427

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 135 gtttacacagcaggagcttccagcatgcaagcca 168
           |||||| ||||| ||||||||||| |||||||||
Sbjct: 229 gtttactcagcaagagcttccagcgtgcaagcca 262
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>ref|NM_202446.1| Arabidopsis thaliana unknown protein AT1G79450 transcript variant
           AT1G79450.2 mRNA, complete cds
          Length = 1571

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 135 gtttacacagcaggagcttccagcatgcaagcca 168
           |||||| ||||| ||||||||||| |||||||||
Sbjct: 238 gtttactcagcaagagcttccagcgtgcaagcca 271
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>gb|AF353999.1|AF353999 Mesostigma viride mitochondrion, complete genome
          Length = 42424

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 87    ggaaggcagctcgaacccaaag 108
             ||||||||||||||||||||||
Sbjct: 18467 ggaaggcagctcgaacccaaag 18488
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>emb|BX816946.1|CNS0ABMZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH78ZB04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1572

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 135 gtttacacagcaggagcttccagcatgcaagcca 168
           |||||| ||||| ||||||||||| |||||||||
Sbjct: 238 gtttactcagcaagagcttccagcgtgcaagcca 271
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>emb|BX818357.1|CNS0AB02 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL74ZF10 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1318

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 135 gtttacacagcaggagcttccagcatgcaagcca 168
           |||||| ||||| ||||||||||| |||||||||
Sbjct: 187 gtttactcagcaagagcttccagcgtgcaagcca 220
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>emb|BX816943.1|CNS0AAHG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH78ZA05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1361

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 135 gtttacacagcaggagcttccagcatgcaagcca 168
           |||||| ||||| ||||||||||| |||||||||
Sbjct: 211 gtttactcagcaagagcttccagcgtgcaagcca 244
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>gb|AC007202.3|T8K14 Arabidopsis thaliana chromosome 1 BAC T8K14 sequence, complete sequence
          Length = 80374

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 135   gtttacacagcaggagcttccagcatgcaagcca 168
             |||||| ||||| ||||||||||| |||||||||
Sbjct: 49610 gtttactcagcaagagcttccagcgtgcaagcca 49577
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>gb|AY088777.1| Arabidopsis thaliana clone 94828 mRNA, complete sequence
          Length = 1390

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 135 gtttacacagcaggagcttccagcatgcaagcca 168
           |||||| ||||| ||||||||||| |||||||||
Sbjct: 192 gtttactcagcaagagcttccagcgtgcaagcca 225
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>dbj|AK175330.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-77-H08
          Length = 1048

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 427 caaaaccatcgaaggtatgtgagaagtcga 456
           |||||||||||| ||||||||| |||||||
Sbjct: 186 caaaaccatcgacggtatgtgaaaagtcga 215
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>gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09,
             complete sequence
          Length = 94399

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                         
Query: 128   attccaagtttacacagcaggagcttccagcatgcaagccactactgacacctggaattg 187
             |||| ||||| || |||||||||||||| ||||| || ||||||   || ||||||||||
Sbjct: 36299 attctaagttcacgcagcaggagcttccggcatggaaaccactatatactcctggaattg 36240

              
Query: 188   t 188
             |
Sbjct: 36239 t 36239
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 31      tcgcgccggcgatcccggcct 51
               |||||||||||||||||||||
Sbjct: 2988566 tcgcgccggcgatcccggcct 2988546
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                            
Query: 128      attccaagtttacacagcaggagcttccagcatgcaagccactactgacacctggaattg 187
                |||| ||||| || |||||||||||||| ||||| || ||||||   || ||||||||||
Sbjct: 26118959 attctaagttcacgcagcaggagcttccggcatggaaaccactatatactcctggaattg 26118900

                 
Query: 188      t 188
                |
Sbjct: 26118899 t 26118899
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>gb|AC006341.2|F3O9 Arabidopsis thaliana chromosome 1 BAC F3O9 sequence, complete sequence
          Length = 114498

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 136   tttacacagcaggagcttccagcatgcaa 164
             ||||| || ||||||||||||||||||||
Sbjct: 50134 tttacccaacaggagcttccagcatgcaa 50106
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>gb|AF285443.4| Homo sapiens chromosome 8 clone SCb-449o20 map p23.1, complete
            sequence
          Length = 147536

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 370  gtgccaaaatacatgaagag 389
            ||||||||||||||||||||
Sbjct: 4581 gtgccaaaatacatgaagag 4562
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>gb|AF202031.5| Homo sapiens chromosome 8 clone SCb-497j4 map p23.1, complete sequence
          Length = 144793

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 370   gtgccaaaatacatgaagag 389
             ||||||||||||||||||||
Sbjct: 54547 gtgccaaaatacatgaagag 54528
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>gb|AF189745.6| Homo sapiens chromosome 8 clone SCb-324n11 map p23.1, complete sequence
          Length = 145275

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 370   gtgccaaaatacatgaagag 389
             ||||||||||||||||||||
Sbjct: 51481 gtgccaaaatacatgaagag 51462
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>gb|AC145378.2| Pan troglodytes BAC clone RP43-56P12 from 7, complete sequence
          Length = 186835

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 364   atgaatgtgccaaaatacatgaag 387
             |||||||| |||||||||||||||
Sbjct: 26438 atgaatgtaccaaaatacatgaag 26415
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>gb|AC108797.8| Mus musculus chromosome 3, clone RP23-349M18, complete sequence
          Length = 208211

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    ccacccagaccccaccctcc 29
             ||||||||||||||||||||
Sbjct: 78375 ccacccagaccccaccctcc 78394
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>gb|AC003986.2| Homo sapiens BAC clone CTA-370M10 from 7, complete sequence
          Length = 188205

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 364    atgaatgtgccaaaatacatgaag 387
              |||||||| |||||||||||||||
Sbjct: 168660 atgaatgtaccaaaatacatgaag 168637
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>gb|AC144950.1| Homo sapiens chromosome 8 clone RP11-191L23 map p22-p21, complete
             sequence
          Length = 147008

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 370   gtgccaaaatacatgaagag 389
             ||||||||||||||||||||
Sbjct: 50518 gtgccaaaatacatgaagag 50537
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>gb|AC084121.13| Homo sapiens chromosome 8, clone RP11-623J22, complete sequence
          Length = 171018

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 370   gtgccaaaatacatgaagag 389
             ||||||||||||||||||||
Sbjct: 19030 gtgccaaaatacatgaagag 19049
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>emb|AL596103.22| Mouse DNA sequence from clone RP23-309E16 on chromosome 11 Contains the
              P4ha2 gene for procollagen-proline 2-oxoglutarate
              4-dioxygenase (proline 4-hydroxylase) alpha II polypeptide,
              a novel pseudogene, two novel genes, a diazepam binding
              inhibitor (Dbi) pseudogene, the Csf2 gene for colony
              stimulating factor 2 (granulocyte-macrophage), the Il3 gene
              for interleukin 3 and a CpG island, complete sequence
          Length = 199500

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    cacagcaggagcttccagca 159
              ||||||||||||||||||||
Sbjct: 103470 cacagcaggagcttccagca 103451
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>gb|AC099755.2| Homo sapiens chromosome 1 clone RP11-434N15, complete sequence
          Length = 154994

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 344   acaagacatgcactataaca 363
             ||||||||||||||||||||
Sbjct: 29888 acaagacatgcactataaca 29907
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>gb|AC096636.1| Homo sapiens chromosome 1 clone RP11-75I2, complete sequence
          Length = 153327

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   acaagacatgcactataaca 363
             ||||||||||||||||||||
Sbjct: 21216 acaagacatgcactataaca 21197
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>gb|AC154373.2| Mus musculus BAC clone RP23-79I18 from chromosome 9, complete sequence
          Length = 225286

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    gaattgtcattgctgccttt 201
              ||||||||||||||||||||
Sbjct: 170556 gaattgtcattgctgccttt 170537
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>gb|AC134684.5| Homo sapiens chromosome 8, clone RP11-1118M6, complete sequence
          Length = 175202

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 370   gtgccaaaatacatgaagag 389
             ||||||||||||||||||||
Sbjct: 50517 gtgccaaaatacatgaagag 50536
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>gb|AC130367.12| Homo sapiens chromosome 8, clone RP11-1322A13, complete sequence
          Length = 188884

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 370   gtgccaaaatacatgaagag 389
             ||||||||||||||||||||
Sbjct: 25567 gtgccaaaatacatgaagag 25548
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>gb|AC134683.9| Homo sapiens chromosome 8, clone RP11-1175L4, complete sequence
          Length = 172084

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 370  gtgccaaaatacatgaagag 389
            ||||||||||||||||||||
Sbjct: 5455 gtgccaaaatacatgaagag 5436
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>gb|AC134395.7| Homo sapiens chromosome 8, clone RP11-739E3, complete sequence
          Length = 178401

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 370  gtgccaaaatacatgaagag 389
            ||||||||||||||||||||
Sbjct: 2235 gtgccaaaatacatgaagag 2216
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>emb|AL133246.3|CNS01DUJ BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 852C13 of
              library RPCI-11 from chromosome 2 of Homo sapiens (Human)
          Length = 222730

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 347    agacatgcactataacaatg 366
              ||||||||||||||||||||
Sbjct: 156840 agacatgcactataacaatg 156859


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,688,314
Number of Sequences: 3902068
Number of extensions: 3688314
Number of successful extensions: 71759
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71495
Number of HSP's gapped (non-prelim): 264
length of query: 518
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 495
effective length of database: 17,143,297,704
effective search space: 8485932363480
effective search space used: 8485932363480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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