>ref|XM_493831.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2388

 Score =  139 bits (70), Expect = 1e-29
 Identities = 181/218 (83%)
 Strand = Plus / Plus

                                                                        
Query: 163  aaattcttctgggtcaactggtgccttcttgagttttgtgtgtgactatcttgatgcagt 222
            |||||||||||| |||||||| || |||||||| ||| ||||||| ||||||||||||||
Sbjct: 1524 aaattcttctggatcaactggagcattcttgagctttttgtgtgagtatcttgatgcagt 1583

                                                                        
Query: 223  acagctcattgttgaaatatggcgtttcgttcagttggatgattctcatgcttttggccc 282
            |||  | ||||| |||||||  || |   |||| |||||| ||||  |||   |||||||
Sbjct: 1584 acaatttattgtagaaatattacgatcgtttcaattggataattcatatgaccttggccc 1643

                                                                        
Query: 283  cacatcacttgatattttgctagagaagttggatacatctgtgagaaggatgaaatgttg 342
             || |||| ||||||||| || |||||||| ||||||||| | ||||||||||| |||||
Sbjct: 1644 aacttcacctgatattttactggagaagttagatacatctataagaaggatgaagtgttg 1703

                                                  
Query: 343  ttatgctggattgaatagagaactggaggttcaagtct 380
            |||||||||||| ||||| | | ||||| |||||||||
Sbjct: 1704 ttatgctggattcaataggggaatggagattcaagtct 1741



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                        
Query: 437  aaactaatgctagataagttgcattggataattaatcacattgatggtctgtgcgctgat 496
            |||||| |||| ||||||||||||||||| |||||||   | ||| ||||||| ||||||
Sbjct: 1798 aaactagtgctggataagttgcattggatgattaatcgtttagattgtctgtgtgctgat 1857

               
Query: 497  gga 499
            |||
Sbjct: 1858 gga 1860

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  139 bits (70), Expect = 1e-29
 Identities = 181/218 (83%)
 Strand = Plus / Minus

                                                                           
Query: 163     aaattcttctgggtcaactggtgccttcttgagttttgtgtgtgactatcttgatgcagt 222
               |||||||||||| |||||||| || |||||||| ||| ||||||| ||||||||||||||
Sbjct: 9619782 aaattcttctggatcaactggagcattcttgagctttttgtgtgagtatcttgatgcagt 9619723

                                                                           
Query: 223     acagctcattgttgaaatatggcgtttcgttcagttggatgattctcatgcttttggccc 282
               |||  | ||||| |||||||  || |   |||| |||||| ||||  |||   |||||||
Sbjct: 9619722 acaatttattgtagaaatattacgatcgtttcaattggataattcatatgaccttggccc 9619663

                                                                           
Query: 283     cacatcacttgatattttgctagagaagttggatacatctgtgagaaggatgaaatgttg 342
                || |||| ||||||||| || |||||||| ||||||||| | ||||||||||| |||||
Sbjct: 9619662 aacttcacctgatattttactggagaagttagatacatctataagaaggatgaagtgttg 9619603

                                                     
Query: 343     ttatgctggattgaatagagaactggaggttcaagtct 380
               |||||||||||| ||||| | | ||||| |||||||||
Sbjct: 9619602 ttatgctggattcaataggggaatggagattcaagtct 9619565



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                           
Query: 437     aaactaatgctagataagttgcattggataattaatcacattgatggtctgtgcgctgat 496
               |||||| |||| ||||||||||||||||| |||||||   | ||| ||||||| ||||||
Sbjct: 9619508 aaactagtgctggataagttgcattggatgattaatcgtttagattgtctgtgtgctgat 9619449

                  
Query: 497     gga 499
               |||
Sbjct: 9619448 gga 9619446

>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete
             sequence
          Length = 165113

 Score =  139 bits (70), Expect = 1e-29
 Identities = 181/218 (83%)
 Strand = Plus / Minus

                                                                         
Query: 163   aaattcttctgggtcaactggtgccttcttgagttttgtgtgtgactatcttgatgcagt 222
             |||||||||||| |||||||| || |||||||| ||| ||||||| ||||||||||||||
Sbjct: 40681 aaattcttctggatcaactggagcattcttgagctttttgtgtgagtatcttgatgcagt 40622

                                                                         
Query: 223   acagctcattgttgaaatatggcgtttcgttcagttggatgattctcatgcttttggccc 282
             |||  | ||||| |||||||  || |   |||| |||||| ||||  |||   |||||||
Sbjct: 40621 acaatttattgtagaaatattacgatcgtttcaattggataattcatatgaccttggccc 40562

                                                                         
Query: 283   cacatcacttgatattttgctagagaagttggatacatctgtgagaaggatgaaatgttg 342
              || |||| ||||||||| || |||||||| ||||||||| | ||||||||||| |||||
Sbjct: 40561 aacttcacctgatattttactggagaagttagatacatctataagaaggatgaagtgttg 40502

                                                   
Query: 343   ttatgctggattgaatagagaactggaggttcaagtct 380
             |||||||||||| ||||| | | ||||| |||||||||
Sbjct: 40501 ttatgctggattcaataggggaatggagattcaagtct 40464



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                         
Query: 437   aaactaatgctagataagttgcattggataattaatcacattgatggtctgtgcgctgat 496
             |||||| |||| ||||||||||||||||| |||||||   | ||| ||||||| ||||||
Sbjct: 40407 aaactagtgctggataagttgcattggatgattaatcgtttagattgtctgtgtgctgat 40348

                
Query: 497   gga 499
             |||
Sbjct: 40347 gga 40345

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  139 bits (70), Expect = 1e-29
 Identities = 181/218 (83%)
 Strand = Plus / Minus

                                                                           
Query: 163     aaattcttctgggtcaactggtgccttcttgagttttgtgtgtgactatcttgatgcagt 222
               |||||||||||| |||||||| || |||||||| ||| ||||||| ||||||||||||||
Sbjct: 9617903 aaattcttctggatcaactggagcattcttgagctttttgtgtgagtatcttgatgcagt 9617844

                                                                           
Query: 223     acagctcattgttgaaatatggcgtttcgttcagttggatgattctcatgcttttggccc 282
               |||  | ||||| |||||||  || |   |||| |||||| ||||  |||   |||||||
Sbjct: 9617843 acaatttattgtagaaatattacgatcgtttcaattggataattcatatgaccttggccc 9617784

                                                                           
Query: 283     cacatcacttgatattttgctagagaagttggatacatctgtgagaaggatgaaatgttg 342
                || |||| ||||||||| || |||||||| ||||||||| | ||||||||||| |||||
Sbjct: 9617783 aacttcacctgatattttactggagaagttagatacatctataagaaggatgaagtgttg 9617724

                                                     
Query: 343     ttatgctggattgaatagagaactggaggttcaagtct 380
               |||||||||||| ||||| | | ||||| |||||||||
Sbjct: 9617723 ttatgctggattcaataggggaatggagattcaagtct 9617686



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                           
Query: 437     aaactaatgctagataagttgcattggataattaatcacattgatggtctgtgcgctgat 496
               |||||| |||| ||||||||||||||||| |||||||   | ||| ||||||| ||||||
Sbjct: 9617629 aaactagtgctggataagttgcattggatgattaatcgtttagattgtctgtgtgctgat 9617570

                  
Query: 497     gga 499
               |||
Sbjct: 9617569 gga 9617567

>dbj|AK067596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111G02, full
            insert sequence
          Length = 2449

 Score =  139 bits (70), Expect = 1e-29
 Identities = 181/218 (83%)
 Strand = Plus / Plus

                                                                        
Query: 163  aaattcttctgggtcaactggtgccttcttgagttttgtgtgtgactatcttgatgcagt 222
            |||||||||||| |||||||| || |||||||| ||| ||||||| ||||||||||||||
Sbjct: 1657 aaattcttctggatcaactggagcattcttgagctttttgtgtgagtatcttgatgcagt 1716

                                                                        
Query: 223  acagctcattgttgaaatatggcgtttcgttcagttggatgattctcatgcttttggccc 282
            |||  | ||||| |||||||  || |   |||| |||||| ||||  |||   |||||||
Sbjct: 1717 acaatttattgtagaaatattacgatcgtttcaattggataattcatatgaccttggccc 1776

                                                                        
Query: 283  cacatcacttgatattttgctagagaagttggatacatctgtgagaaggatgaaatgttg 342
             || |||| ||||||||| || |||||||| ||||||||| | ||||||||||| |||||
Sbjct: 1777 aacttcacctgatattttactggagaagttagatacatctataagaaggatgaagtgttg 1836

                                                  
Query: 343  ttatgctggattgaatagagaactggaggttcaagtct 380
            |||||||||||| ||||| | | ||||| |||||||||
Sbjct: 1837 ttatgctggattcaataggggaatggagattcaagtct 1874



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                        
Query: 437  aaactaatgctagataagttgcattggataattaatcacattgatggtctgtgcgctgat 496
            |||||| |||| ||||||||||||||||| |||||||   | ||| ||||||| ||||||
Sbjct: 1931 aaactagtgctggataagttgcattggatgattaatcgtttagattgtctgtgtgctgat 1990

               
Query: 497  gga 499
            |||
Sbjct: 1991 gga 1993

>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 380     ttggattttggtttgttagctattt 404
               ||||||||| |||||||||||||||
Sbjct: 3997346 ttggatttttgtttgttagctattt 3997370

>gb|AC104643.2| Homo sapiens chromosome 3 clone RP11-356I4, complete sequence
          Length = 170691

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 254   cagttggatgattctcatgct 274
             |||||||||||||||||||||
Sbjct: 29429 cagttggatgattctcatgct 29449

>gb|AC116104.7| Mus musculus chromosome 5, clone RP23-18K20, complete sequence
          Length = 210459

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 69    ttaaaggagcctgggctgtga 89
             |||||||||||||||||||||
Sbjct: 95062 ttaaaggagcctgggctgtga 95082

>gb|AC183296.3| Pan troglodytes BAC clone CH251-352A17 from chromosome 19, complete
              sequence
          Length = 180482

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 475    cattgatggtctgtgcgctg 494
              ||||||||||||||||||||
Sbjct: 118679 cattgatggtctgtgcgctg 118660

>gb|AC121776.3| Mus musculus BAC clone RP23-356I6 from chromosome 3, complete sequence
          Length = 187473

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 114    ttcaaagtactctgagaaca 133
              ||||||||||||||||||||
Sbjct: 180809 ttcaaagtactctgagaaca 180828

>gb|AC124547.4| Mus musculus BAC clone RP23-274I8 from chromosome 1, complete sequence
          Length = 225058

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   ccttcttgagttttgtgtgt 205
             ||||||||||||||||||||
Sbjct: 94132 ccttcttgagttttgtgtgt 94151

>gb|AC104897.7| Mus musculus chromosome 12, clone RP23-300E12, complete sequence
          Length = 194600

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  ccttcttgagttttgtgtgt 205
            ||||||||||||||||||||
Sbjct: 2115 ccttcttgagttttgtgtgt 2096

>emb|CR847503.8| Zebrafish DNA sequence from clone DKEY-20D21 in linkage group 8,
             complete sequence
          Length = 217514

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 436   aaaactaatgctagataagt 455
             ||||||||||||||||||||
Sbjct: 15567 aaaactaatgctagataagt 15548

>emb|AL139403.7| Human DNA sequence from clone RP11-33K5 on chromosome 10p14-15.3
             Contains a novel pseudogene (FLJ20420), complete sequence
          Length = 111344

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 142   agaagtcaatatcttagatgtaaa 165
             |||||||||||||||||| |||||
Sbjct: 25741 agaagtcaatatcttagaagtaaa 25718

>emb|CR384099.6| Zebrafish DNA sequence from clone DKEY-266I18 in linkage group 24,
             complete sequence
          Length = 121857

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    catattagatacagttaaag 74
             ||||||||||||||||||||
Sbjct: 10329 catattagatacagttaaag 10310

>gb|AC008114.25| Homo sapiens 12 BAC RP11-502N13 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 126503

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 457  gcattggataattaatcaca 476
            ||||||||||||||||||||
Sbjct: 8957 gcattggataattaatcaca 8938

>gb|AC092296.2| Homo sapiens chromosome 19 clone CTD-3162L10, complete sequence
          Length = 150222

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 475   cattgatggtctgtgcgctg 494
             ||||||||||||||||||||
Sbjct: 32826 cattgatggtctgtgcgctg 32807

>gb|AC010842.5|AC010842 Drosophila melanogaster, chromosome 2R, region 59F5-59F8, BAC clone
             BACR02E09, complete sequence
          Length = 175118

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 434   tcaaaactaatgctagataa 453
             ||||||||||||||||||||
Sbjct: 10262 tcaaaactaatgctagataa 10281

>gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, region 59E3-59F4, BAC clone
              BACR48M01, complete sequence
          Length = 188272

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 434    tcaaaactaatgctagataa 453
              ||||||||||||||||||||
Sbjct: 154320 tcaaaactaatgctagataa 154339

>emb|BX005196.15| Zebrafish DNA sequence from clone CH211-142M16 in linkage group 12,
             complete sequence
          Length = 187209

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 430   atgttcaaaactaatgctagataagttg 457
             ||||| ||||| ||||||||||||||||
Sbjct: 26679 atgttgaaaaccaatgctagataagttg 26706

>emb|BX649500.9| Zebrafish DNA sequence from clone CH211-286J13 in linkage group 4,
            complete sequence
          Length = 43749

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  ttcttgagttttgtgtgtga 207
            ||||||||||||||||||||
Sbjct: 6803 ttcttgagttttgtgtgtga 6822

>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5)
          Length = 2199546

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 476    attgatggtctgtgcgctga 495
              ||||||||||||||||||||
Sbjct: 187599 attgatggtctgtgcgctga 187580

>gb|AC005002.2|AC005002 Homo sapiens clone DJ378P09, complete sequence
          Length = 119841

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 223    acagctcattgttgaaatat 242
              ||||||||||||||||||||
Sbjct: 117777 acagctcattgttgaaatat 117796

>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete
              sequence
          Length = 598988

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 434    tcaaaactaatgctagataa 453
              ||||||||||||||||||||
Sbjct: 187860 tcaaaactaatgctagataa 187879

>gb|M18946.1|MUSIGKVAQ Mouse Ig kappa chain gene V-region (V-Jk4) from 14C3, 5' end
          Length = 943

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 188 ttcttgagttttgtgtgtgactat 211
           ||||||| ||||||||||||||||
Sbjct: 559 ttcttgaattttgtgtgtgactat 582

>gb|M18945.1|MUSIGKVAP Mouse Ig kappa chain gene V-region (V-Jk1) from 17C1, 5' end
          Length = 943

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 188 ttcttgagttttgtgtgtgactat 211
           ||||||| ||||||||||||||||
Sbjct: 559 ttcttgaattttgtgtgtgactat 582


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,030,391
Number of Sequences: 3902068
Number of extensions: 5030391
Number of successful extensions: 96153
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95983
Number of HSP's gapped (non-prelim): 170
length of query: 512
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 489
effective length of database: 17,143,297,704
effective search space: 8383072577256
effective search space used: 8383072577256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)