ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags36c07 |
|---|---|
| Clone Library Name | barley_pub |
>RSA3_KLULA (Q6CK62) Ribosome assembly protein 3| Length = 203 Score = 32.0 bits (71), Expect = 1.7 Identities = 24/67 (35%), Positives = 29/67 (43%) Frame = +1 Query: 265 ENKGTIKCELRQDVSSPHQYYQDDGSSDLEEIFWEDRDVRLGYIEKVLELSELCTYQDLD 444 + K K QDVS D SSD E ED D +L +EK E T D+D Sbjct: 14 KRKNRRKKRRTQDVSDS----SSDSSSDSENSSVEDNDTKLETVEKAASDVEDVTLSDID 69 Query: 445 VWYLEDE 465 + EDE Sbjct: 70 MDKEEDE 76
>M3K14_HUMAN (Q99558) Mitogen-activated protein kinase kinase kinase 14 (EC| 2.7.11.25) (NF-kappa beta-inducing kinase) (Serine/threonine-protein kinase NIK) (HsNIK) Length = 947 Score = 31.6 bits (70), Expect = 2.2 Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 5/100 (5%) Frame = +1 Query: 16 PTEQDRYNSPLET----MEGAEPGKGQDESFTGPPKNSLEMLDEREPETPRPTASVELIE 183 P Q Y+ L + PG E TG + ++ PE P P S L Sbjct: 676 PPNQANYHQTLHAQPRELSPRAPGPRPAEETTG---RAPKLQPPLPPEPPEPNKSPPLTL 732 Query: 184 QVNYIKQEQPSPVSVLDPLFHEDVGSPENKGTI-KCELRQ 300 +P P+S L+P + SPE K T+ + EL+Q Sbjct: 733 SKEESGMWEPLPLSSLEPAPARNPSSPERKATVPEQELQQ 772
>CF096_PONPY (Q5RAR5) Protein C6orf96 homolog| Length = 449 Score = 31.6 bits (70), Expect = 2.2 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 3/85 (3%) Frame = +1 Query: 358 IFWEDRDVRLGYIEKVLELSELCTYQDLDVWYLEDELINPCLFE---ELHQGNHQTDDLK 528 +FW +D + ++ KVLE E+ Y ++ + + E+E +N E +LH+G + + Sbjct: 235 VFWNVKDKTMKHVMKVLEKHEIQPY-EIALVHWENEELNYIKIEGQSKLHRGEIKLNSEL 293 Query: 529 LFFDCICEAIAAVQEKHFGNPHCLS 603 D I E A F N CLS Sbjct: 294 DLDDAILEKFA------FSNALCLS 312
>CF096_HUMAN (Q9NWS8) Protein C6orf96| Length = 449 Score = 31.6 bits (70), Expect = 2.2 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 3/85 (3%) Frame = +1 Query: 358 IFWEDRDVRLGYIEKVLELSELCTYQDLDVWYLEDELINPCLFE---ELHQGNHQTDDLK 528 +FW +D + ++ KVLE E+ Y ++ + + E+E +N E +LH+G + + Sbjct: 235 VFWNVKDKTMKHVMKVLEKHEIQPY-EIALVHWENEELNYIKIEGQSKLHRGEIKLNSEL 293 Query: 529 LFFDCICEAIAAVQEKHFGNPHCLS 603 D I E A F N CLS Sbjct: 294 DLDDAILEKFA------FSNALCLS 312
>LATS2_MOUSE (Q7TSJ6) Serine/threonine-protein kinase LATS2 (EC 2.7.11.1) (Large| tumor suppressor homolog 2) (Serine/threonine-protein kinase kpm) (Kinase phosphorylated during mitosis protein) Length = 1042 Score = 31.2 bits (69), Expect = 2.9 Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 1/93 (1%) Frame = +1 Query: 73 GKGQDESFTGP-PKNSLEMLDEREPETPRPTASVELIEQVNYIKQEQPSPVSVLDPLFHE 249 G + SF P P+ SL P T + ++ V ++ +P P + + P Sbjct: 380 GPSRTNSFNNPQPEPSLPA-----PNTVTAVTAAHILHPVKSVRVLRPEPQTAVGPSHPA 434 Query: 250 DVGSPENKGTIKCELRQDVSSPHQYYQDDGSSD 348 V +P T E ++ + PH D G S+ Sbjct: 435 WVAAPTAPATESLETKEGSAGPHPLDVDYGGSE 467
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor| Length = 374 Score = 31.2 bits (69), Expect = 2.9 Identities = 25/85 (29%), Positives = 32/85 (37%) Frame = -1 Query: 584 PKCFSCTAAIASQMQXXXXXXXXXXXFP*CSSSNRQGLINSSSRYHTSKSWYVHNSDSSS 405 P S T + SSS+ +SSS +S S +S SSS Sbjct: 144 PSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 203 Query: 404 TFSIYPNLTSLSSQKISSRSDDPSS 330 + S P +S SS SS S SS Sbjct: 204 SSSSVPITSSTSSSHSSSSSSSSSS 228
>MATK_MARSC (Q8WKK9) Maturase K (Intron maturase)| Length = 508 Score = 30.4 bits (67), Expect = 4.9 Identities = 20/66 (30%), Positives = 31/66 (46%) Frame = +1 Query: 295 RQDVSSPHQYYQDDGSSDLEEIFWEDRDVRLGYIEKVLELSELCTYQDLDVWYLEDELIN 474 R+ SS +++ GSS LEE+F E + L +I S+ + WYL+ IN Sbjct: 443 RKPKSSVRAFFKKLGSSFLEELFLEXQISSLIFIRSSPRSSDRSNQSKVRFWYLDIISIN 502 Query: 475 PCLFEE 492 + E Sbjct: 503 EIINHE 508
>CD2L5_MOUSE (Q69ZA1) Cell division cycle 2-like protein kinase 5 (EC 2.7.11.22)| (CDC2-related protein kinase 5) Length = 1511 Score = 30.4 bits (67), Expect = 4.9 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 17/85 (20%) Frame = +1 Query: 34 YNSPLET---MEGAEPGKGQDESFTGPPKNSLEML-----------DEREPETPRPTASV 171 + +PL+ +E + PG GQD+ + LE+ D+R PE P P Sbjct: 1211 HEAPLQLRPPLEPSTPGSGQDDLIQHQDRRILELTPEPDRPRILPPDQRPPEPPEPPPVT 1270 Query: 172 ELIEQVNYIKQEQPSPV---SVLDP 237 E E ++Y + Q P S+ DP Sbjct: 1271 E--EDLDYRTENQHVPTTSSSLTDP 1293
>TESK2_MOUSE (Q8VCT9) Dual specificity testis-specific protein kinase 2 (EC| 2.7.12.1) (Testicular protein kinase 2) Length = 570 Score = 30.4 bits (67), Expect = 4.9 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Frame = +1 Query: 103 PPKNSLEMLDEREP-ETPRPTASVELIE-QVNYIKQEQPSPVSVLDPLFHEDVGSPENKG 276 P L LD++ P ++PRP ++ L Q + + P VSVLDP + G+ Sbjct: 339 PGGKRLSSLDDKIPHKSPRPRRTIWLSRSQSDIFSHKPPRTVSVLDPYYQPRDGATHTPK 398 Query: 277 TIKCELRQDV 306 RQD+ Sbjct: 399 VNPFSARQDL 408
>SRCA_HUMAN (Q86TD4) Sarcalumenin precursor| Length = 932 Score = 30.0 bits (66), Expect = 6.4 Identities = 37/130 (28%), Positives = 52/130 (40%), Gaps = 6/130 (4%) Frame = +1 Query: 49 ETMEGAEPGKGQDESFTGPPKNSLEMLDEREP----ETPRPTASVELIEQVNYIKQEQPS 216 E EG P +G + G P+ + E + REP E P T + + + QP Sbjct: 389 EPQEGGAPQEGGEPQEGGDPQEAREPQEAREPQEGAELPEATGTTS-----HRDRGAQPG 443 Query: 217 PVSVLDPLFHEDVGSP--ENKGTIKCELRQDVSSPHQYYQDDGSSDLEEIFWEDRDVRLG 390 P + L E +GS + K E Q SP Q++ EE DR Sbjct: 444 P----EELNTESMGSETLDMKAEEPEEGHQGRESPIIVAQEETEDANEEAPLRDR----S 495 Query: 391 YIEKVLELSE 420 +IEK L L+E Sbjct: 496 HIEKTLMLNE 505
>ZO2_HUMAN (Q9UDY2) Tight junction protein ZO-2 (Zonula occludens 2 protein)| (Zona occludens 2 protein) (Tight junction protein 2) Length = 1190 Score = 30.0 bits (66), Expect = 6.4 Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 5/112 (4%) Frame = +1 Query: 37 NSPLETMEGAEPGKGQDESFTGPPKNSLEMLD--EREPETPRPTASVELIEQVNY---IK 201 ++P+ EG E G+ +E PK+ L + E+ R EL E N I Sbjct: 1053 STPIPPQEGEEVGESSEEQ-DNAPKSVLGKVKIFEKMDHKARLQRMQELQEAQNARIEIA 1111 Query: 202 QEQPSPVSVLDPLFHEDVGSPENKGTIKCELRQDVSSPHQYYQDDGSSDLEE 357 Q+ P +V D G+P++ + E ++ S P+Q + SD EE Sbjct: 1112 QKHPDIYAVPIKTHKPDPGTPQHTSSRPPEPQKAPSRPYQDTRGSYGSDAEE 1163
>GSPT1_MOUSE (Q8R050) G1 to S phase transition protein 1 homolog| Length = 499 Score = 29.6 bits (65), Expect = 8.3 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = +1 Query: 49 ETMEGAEPGKGQDESFTGPPKNSLEMLDEREPETPRPTASV 171 E + AEPG G P +++ EM++E E E P+P ++V Sbjct: 25 EEISEAEPGGGSSGDGRPPEESTQEMMEEEE-EIPKPKSAV 64
>Y3178_BACHD (Q9K829) UPF0173 metal-dependent hydrolase BH3178| Length = 226 Score = 29.6 bits (65), Expect = 8.3 Identities = 27/110 (24%), Positives = 47/110 (42%) Frame = -2 Query: 499 DVVLQTGKG*SIHLPDTIHLSPGMCIILIAPAPFLYILT*HPCPPRRSLPGLMIHRLGST 320 DV+L T G + H+ DT+ L+ ++IAP L S G+ +H + Sbjct: 42 DVILLT-HGHNDHVGDTLQLAKQNDALVIAPFELATYL---------SWKGVKVHEM--- 88 Query: 319 GGDSRHLGAAHILSCPYFQGCRHLHGIMDQEQTQDWVAPALYSSLVLSAQ 170 H+G AH + + + HG E+ Q V + S ++ +A+ Sbjct: 89 -----HIGGAHQFEFGHVKLTQAFHGSSYTEENQTIVYTGMPSGILFTAE 133
>CAH10_PONPY (Q5R4U0) Carbonic anhydrase-related protein 10| Length = 328 Score = 29.6 bits (65), Expect = 8.3 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = -1 Query: 359 ISSRSDDPSSW*YWWGLETSWRSSHFIVPLFSGLPTSSWN 240 IS++ + P WW + + S VP F GL S+WN Sbjct: 19 ISAQQNSPKIHEGWWAYKEVVQGSFVPVPSFWGLVNSAWN 58
>CAH10_MOUSE (P61215) Carbonic anhydrase-related protein 10 (Carbonic| anhydrase-related protein X) (CARP X) (CA-RP X) Length = 328 Score = 29.6 bits (65), Expect = 8.3 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = -1 Query: 359 ISSRSDDPSSW*YWWGLETSWRSSHFIVPLFSGLPTSSWN 240 IS++ + P WW + + S VP F GL S+WN Sbjct: 19 ISAQQNSPKIHEGWWAYKEVVQGSFVPVPSFWGLVNSAWN 58
>CAH10_MACFA (Q9N085) Carbonic anhydrase-related protein 10| Length = 328 Score = 29.6 bits (65), Expect = 8.3 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = -1 Query: 359 ISSRSDDPSSW*YWWGLETSWRSSHFIVPLFSGLPTSSWN 240 IS++ + P WW + + S VP F GL S+WN Sbjct: 19 ISAQQNSPKIHEGWWAYKEVVQGSFVPVPSFWGLVNSAWN 58
>CAH10_HUMAN (Q9NS85) Carbonic anhydrase-related protein 10 (Carbonic| anhydrase-related protein X) (CARP X) (CA-RP X) (Cerebral protein 15) Length = 328 Score = 29.6 bits (65), Expect = 8.3 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = -1 Query: 359 ISSRSDDPSSW*YWWGLETSWRSSHFIVPLFSGLPTSSWN 240 IS++ + P WW + + S VP F GL S+WN Sbjct: 19 ISAQQNSPKIHEGWWAYKEVVQGSFVPVPSFWGLVNSAWN 58
>LRC48_HUMAN (Q9H069) Leucine-rich repeat-containing protein 48| Length = 523 Score = 29.6 bits (65), Expect = 8.3 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 13/119 (10%) Frame = +1 Query: 334 DGSSDLEEIFWEDRDVR-LGYIEKVLELSELCTYQDLDVWYLEDELINPCLFEE-LHQGN 507 +GS + ++ ED + L Y+ V EL E TY+D V +I +FE L Q Sbjct: 245 NGSFLFDSMYAEDSEGNNLSYLPGVGELLE--TYKDKFV------IICVNIFEYGLKQQE 296 Query: 508 HQTDDLKLFFDCICEAI-----------AAVQEKHFGNPHCLSFVRQNIQAPXVGQSLI 651 + +L F +C+ EAI A +EKH + LS +R+ ++ P + + ++ Sbjct: 297 KRKTELDTFSECVREAIQENQEQGKRKIAKFEEKHLSS---LSAIREELELPNIEKMIL 352
>ENV_HV1RH (P04579) Envelope polyprotein GP160 precursor [Contains: Exterior| membrane glycoprotein (GP120); Transmembrane glycoprotein (GP41)] Length = 865 Score = 29.6 bits (65), Expect = 8.3 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = -3 Query: 222 HRTGLLLLYIVHLFYQLNRRGWSG-SFWLSLI*HLKRILRGACKTLI 85 HR LLL +V + L RRGW +W +L+ + + L+ + +L+ Sbjct: 778 HRLRDLLLIVVRIVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLL 824
>ALL5_HEVBR (Q39967) Major latex allergen Hev b 5| Length = 150 Score = 29.6 bits (65), Expect = 8.3 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Frame = +1 Query: 49 ETMEGAEPGKGQDESFTGPPKNSLEMLDEREPETPRP-TASVELIEQVNYIKQEQPSP 219 +T E A P + E+ P+ EPE P P T E +E++ K E+P+P Sbjct: 27 KTEEPAAPPASEQETADATPEKEEPTAAPAEPEAPAPETEKAEEVEKIE--KTEEPAP 82
>VG58_SHV21 (Q01053) Gene 58 protein| Length = 357 Score = 29.6 bits (65), Expect = 8.3 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Frame = -3 Query: 594 MGVSKVFLLYCCYSFTDAVK---EELQIICLMISLM*FFKQARVDQFIFQIPYI*VLVC 427 +G L YC +FT E L I CL ++++ FF + ++ +P++ VL C Sbjct: 54 LGAHVTILCYCYITFTKEWSYYIEALGIACLFLTMLTFFISHLMWAPLYTLPFVFVLNC 112
>TESK2_RAT (Q924U5) Dual specificity testis-specific protein kinase 2 (EC| 2.7.12.1) (Testicular protein kinase 2) Length = 570 Score = 29.6 bits (65), Expect = 8.3 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Frame = +1 Query: 103 PPKNSLEMLDEREP-ETPRPTASVELIE-QVNYIKQEQPSPVSVLDPLFHEDVGSPENKG 276 P L LD++ P ++PRP ++ L Q + ++ P V+VLDP + G+ Sbjct: 339 PGGKRLSSLDDKIPHKSPRPRRTIWLSRSQSDIFSRKPPRTVNVLDPYYQPRDGATHTPK 398 Query: 277 TIKCELRQDV 306 RQD+ Sbjct: 399 VNPFSARQDL 408
>YB95_SCHPO (O42970) Hypothetical serine-rich protein C1E8.05 precursor| Length = 317 Score = 29.6 bits (65), Expect = 8.3 Identities = 38/140 (27%), Positives = 52/140 (37%), Gaps = 5/140 (3%) Frame = -1 Query: 635 TXGACMFCLTKDKQWGFPKCFSCTAAIASQMQXXXXXX---XXXXXFP*CSSSNRQGLIN 465 T AC C + S T+ S + P SSS+ + Sbjct: 107 TLQACSTCTISTSSLSYSGTISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPS 166 Query: 464 SSSRYHTSKSWYVHNSDSSSTFSIYPNLTSLSSQKISSRSDDPSSW*YWWGLETSWRSSH 285 SSS +S S +S SSS S + +S SS SS S +S +S SS Sbjct: 167 SSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSAS------PSSSKSSSK 220 Query: 284 FIVPLF--SGLPTSSWNNGS 231 F F S P SS ++G+ Sbjct: 221 FSSSSFITSTTPASSSSSGA 240 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.136 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 98,815,861 Number of Sequences: 219361 Number of extensions: 2244005 Number of successful extensions: 5291 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 4813 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5179 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
