ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags36a13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483307.1| Oryza sativa (japonica cultivar-group), mRNA 404 e-109
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 404 e-109
3dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic D... 404 e-109
4dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic D... 404 e-109
5dbj|AK065422.1| Oryza sativa (japonica cultivar-group) cDNA clon... 396 e-107
6gb|AY090611.1| Brassica nigra PSR9 (psr9) mRNA, partial cds 60 8e-06
7ref|NM_197844.1| Oryza sativa (japonica cultivar-group) putative... 50 0.007
8gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 gen... 50 0.007
9dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
10dbj|AK102709.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
11dbj|AK065479.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
12gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 50 0.007
13ref|NM_119712.4| Arabidopsis thaliana protein binding AT4G35470 ... 48 0.029
14emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, ... 48 0.029
15emb|AL117188.1|ATF15J1 Arabidopsis thaliana DNA chromosome 4, BA... 48 0.029
16gb|AY849574.1| Arabidopsis thaliana plant intracellular Ras-grou... 48 0.029
17gb|AY128730.1| Arabidopsis thaliana putative protein (At4g35470)... 48 0.029
18gb|AY072324.1| Arabidopsis thaliana putative protein (At4g35470;... 48 0.029
19emb|BX828819.1|CNS0A2KS Arabidopsis thaliana Full-length cDNA Co... 48 0.029
20emb|CR955012.2| Medicago truncatula chromosome 5 clone mth2-84f1... 46 0.11
21emb|CT025843.1| Medicago truncatula chromosome 5 clone mth2-17e2... 42 1.8
22gb|AC129217.3| Mus musculus BAC clone RP24-458M20 from chromosom... 42 1.8
23gb|AC073153.16| Mus musculus Strain C57BL6/J chromosome 19 BAC, ... 42 1.8
24gb|AF069953.1|AF069953 Mus musculus Gng3lg gene, partial sequenc... 42 1.8
25emb|AL121819.6|CNS01DSL Human chromosome 14 DNA sequence BAC C-3... 42 1.8
26ref|NM_127299.2| Arabidopsis thaliana protein binding AT2G17440 ... 40 7.0
27gb|AC162910.2| Mus musculus BAC clone RP24-322O3 from chromosome... 40 7.0
28gb|AC132104.3| Mus musculus BAC clone RP24-364N7 from chromosome... 40 7.0
29gb|AE014306.1| Homo sapiens chromosome 13q34 schizophrenia regio... 40 7.0
30gb|AC121574.3| Mus musculus BAC clone RP23-241E9 from 14, comple... 40 7.0
31gb|AE014075.1| Escherichia coli CFT073, complete genome 40 7.0
32gb|CP000243.1| Escherichia coli UTI89, complete genome 40 7.0
33emb|AL359677.19| Human DNA sequence from clone RP11-523E20 on ch... 40 7.0
34emb|AL359761.7| Human DNA sequence from clone RP11-202O6 on chro... 40 7.0
35gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 40 7.0
36gb|AY849575.1| Arabidopsis thaliana plant intracellular Ras-grou... 40 7.0
37gb|AE014177.1| Mus musculus piebald deletion region section 5 of... 40 7.0
38dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 40 7.0
39gb|AC024909.28| Homo sapiens 12 BAC RP11-823E8 (Roswell Park Can... 40 7.0
40gb|AC132568.3| Mus musculus BAC clone RP24-484M20 from chromosom... 40 7.0
41gb|AC155635.3| Mus musculus BAC clone RP24-252C1 from chromosome... 40 7.0
42dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
43dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
44emb|BX818857.1|CNS0A8UU Arabidopsis thaliana Full-length cDNA Co... 40 7.0
45gb|AC167420.1| Mus musculus BAC clone RP23-239F23 from chromosom... 40 7.0
46gb|AC002329.2|AC002329 Arabidopsis thaliana chromosome II sectio... 40 7.0
47dbj|AP006450.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
48dbj|AP006162.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
49gb|AC163697.3| Gallus gallus BAC clone CH261-186A14 from chromos... 40 7.0
50emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4,... 40 7.0
51gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 7.0
52dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 7.0
53gb|AC132241.3| Mus musculus BAC clone RP24-413I2 from chromosome... 40 7.0
54gb|U28375.1|ECU28375 Escherichia coli K-12 genome; approximately... 40 7.0
55gb|CP000038.1| Shigella sonnei Ss046, complete genome 40 7.0 
>ref|XM_483307.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1731

 Score =  404 bits (204), Expect = e-109
 Identities = 363/416 (87%)
 Strand = Plus / Plus

                                                                        
Query: 102  cctgattcagtaggaagcctcacacgattgaagaagttactggttgagacaaatgatctt 161
            ||||||||| |||||||||| |||||| |||||||| || | || |||||||| || |||
Sbjct: 1072 cctgattcaataggaagccttacacgactgaagaagctaattgtcgagacaaacgacctt 1131

                                                                        
Query: 162  gatgagttgccttacacaataggtcattgtgtttcactggtggaattgcaggcaggctat 221
            ||||||||||||||||| || ||||| |||||||||||||| ||| |||||||||| |||
Sbjct: 1132 gatgagttgccttacaccattggtcactgtgtttcactggttgaactgcaggcaggttat 1191

                                                                        
Query: 222  aatcacctgaaggctcttccagaggctgttgggaagctagaatctctagagatcctctct 281
            |||||||| ||||||||||| ||||| ||||| ||||||||  |||||||||||||||| 
Sbjct: 1192 aatcacctaaaggctcttcctgaggcggttggaaagctagagcctctagagatcctctcc 1251

                                                                        
Query: 282  gtgaggtacaacaatatcaggagccttccaactacaatggcatctctcactaagctgaag 341
            ||||| || |||||| ||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 1252 gtgagatataacaatctcaggagccttccaactacaatggcctctctcactaaactgaag 1311

                                                                        
Query: 342  gaggttgatgccagcttcaatgagcttgagtcgattccggagaacttttgctttgtcact 401
            ||||| ||||  |||||||| ||||| ||||| || || |||||||| |||||||  || 
Sbjct: 1312 gaggtcgatgtgagcttcaacgagctcgagtcaatccctgagaacttctgctttgctacc 1371

                                                                        
Query: 402  tctcttattaaactgaatgtcgggaacaactttgctgacatgaaatccctgcctcgctct 461
            ||||| ||||||||||| || |||||||| ||||||||| |  |||  ||||||||||||
Sbjct: 1372 tctctcattaaactgaacgttgggaacaattttgctgacctacaatatctgcctcgctct 1431

                                                                    
Query: 462  attggtaaccttgagatgctggaggagttggatataagcaataaccagattagggt 517
            ||||| ||||||||||||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 1432 attggcaaccttgagatgctggaagagttggatatgagcaacaatcagattagggt 1487



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 56   aaatcttgaggagcttgacgtgggt 80
            |||||||||||||||||| ||||||
Sbjct: 1026 aaatcttgaggagcttgatgtgggt 1050
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  404 bits (204), Expect = e-109
 Identities = 363/416 (87%)
 Strand = Plus / Minus

                                                                            
Query: 102      cctgattcagtaggaagcctcacacgattgaagaagttactggttgagacaaatgatctt 161
                ||||||||| |||||||||| |||||| |||||||| || | || |||||||| || |||
Sbjct: 25371990 cctgattcaataggaagccttacacgactgaagaagctaattgtcgagacaaacgacctt 25371931

                                                                            
Query: 162      gatgagttgccttacacaataggtcattgtgtttcactggtggaattgcaggcaggctat 221
                ||||||||||||||||| || ||||| |||||||||||||| ||| |||||||||| |||
Sbjct: 25371930 gatgagttgccttacaccattggtcactgtgtttcactggttgaactgcaggcaggttat 25371871

                                                                            
Query: 222      aatcacctgaaggctcttccagaggctgttgggaagctagaatctctagagatcctctct 281
                |||||||| ||||||||||| ||||| ||||| ||||||||  |||||||||||||||| 
Sbjct: 25371870 aatcacctaaaggctcttcctgaggcggttggaaagctagagcctctagagatcctctcc 25371811

                                                                            
Query: 282      gtgaggtacaacaatatcaggagccttccaactacaatggcatctctcactaagctgaag 341
                ||||| || |||||| ||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 25371810 gtgagatataacaatctcaggagccttccaactacaatggcctctctcactaaactgaag 25371751

                                                                            
Query: 342      gaggttgatgccagcttcaatgagcttgagtcgattccggagaacttttgctttgtcact 401
                ||||| ||||  |||||||| ||||| ||||| || || |||||||| |||||||  || 
Sbjct: 25371750 gaggtcgatgtgagcttcaacgagctcgagtcaatccctgagaacttctgctttgctacc 25371691

                                                                            
Query: 402      tctcttattaaactgaatgtcgggaacaactttgctgacatgaaatccctgcctcgctct 461
                ||||| ||||||||||| || |||||||| ||||||||| |  |||  ||||||||||||
Sbjct: 25371690 tctctcattaaactgaacgttgggaacaattttgctgacctacaatatctgcctcgctct 25371631

                                                                        
Query: 462      attggtaaccttgagatgctggaggagttggatataagcaataaccagattagggt 517
                ||||| ||||||||||||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 25371630 attggcaaccttgagatgctggaagagttggatatgagcaacaatcagattagggt 25371575



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 56       aaatcttgaggagcttgacgtgggt 80
                |||||||||||||||||| ||||||
Sbjct: 25372036 aaatcttgaggagcttgatgtgggt 25372012
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>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0711H09
          Length = 185858

 Score =  404 bits (204), Expect = e-109
 Identities = 363/416 (87%)
 Strand = Plus / Minus

                                                                        
Query: 102  cctgattcagtaggaagcctcacacgattgaagaagttactggttgagacaaatgatctt 161
            ||||||||| |||||||||| |||||| |||||||| || | || |||||||| || |||
Sbjct: 3306 cctgattcaataggaagccttacacgactgaagaagctaattgtcgagacaaacgacctt 3247

                                                                        
Query: 162  gatgagttgccttacacaataggtcattgtgtttcactggtggaattgcaggcaggctat 221
            ||||||||||||||||| || ||||| |||||||||||||| ||| |||||||||| |||
Sbjct: 3246 gatgagttgccttacaccattggtcactgtgtttcactggttgaactgcaggcaggttat 3187

                                                                        
Query: 222  aatcacctgaaggctcttccagaggctgttgggaagctagaatctctagagatcctctct 281
            |||||||| ||||||||||| ||||| ||||| ||||||||  |||||||||||||||| 
Sbjct: 3186 aatcacctaaaggctcttcctgaggcggttggaaagctagagcctctagagatcctctcc 3127

                                                                        
Query: 282  gtgaggtacaacaatatcaggagccttccaactacaatggcatctctcactaagctgaag 341
            ||||| || |||||| ||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 3126 gtgagatataacaatctcaggagccttccaactacaatggcctctctcactaaactgaag 3067

                                                                        
Query: 342  gaggttgatgccagcttcaatgagcttgagtcgattccggagaacttttgctttgtcact 401
            ||||| ||||  |||||||| ||||| ||||| || || |||||||| |||||||  || 
Sbjct: 3066 gaggtcgatgtgagcttcaacgagctcgagtcaatccctgagaacttctgctttgctacc 3007

                                                                        
Query: 402  tctcttattaaactgaatgtcgggaacaactttgctgacatgaaatccctgcctcgctct 461
            ||||| ||||||||||| || |||||||| ||||||||| |  |||  ||||||||||||
Sbjct: 3006 tctctcattaaactgaacgttgggaacaattttgctgacctacaatatctgcctcgctct 2947

                                                                    
Query: 462  attggtaaccttgagatgctggaggagttggatataagcaataaccagattagggt 517
            ||||| ||||||||||||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 2946 attggcaaccttgagatgctggaagagttggatatgagcaacaatcagattagggt 2891



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 56   aaatcttgaggagcttgacgtgggt 80
            |||||||||||||||||| ||||||
Sbjct: 3352 aaatcttgaggagcttgatgtgggt 3328
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>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0016N23
          Length = 147336

 Score =  404 bits (204), Expect = e-109
 Identities = 363/416 (87%)
 Strand = Plus / Minus

                                                                          
Query: 102    cctgattcagtaggaagcctcacacgattgaagaagttactggttgagacaaatgatctt 161
              ||||||||| |||||||||| |||||| |||||||| || | || |||||||| || |||
Sbjct: 147175 cctgattcaataggaagccttacacgactgaagaagctaattgtcgagacaaacgacctt 147116

                                                                          
Query: 162    gatgagttgccttacacaataggtcattgtgtttcactggtggaattgcaggcaggctat 221
              ||||||||||||||||| || ||||| |||||||||||||| ||| |||||||||| |||
Sbjct: 147115 gatgagttgccttacaccattggtcactgtgtttcactggttgaactgcaggcaggttat 147056

                                                                          
Query: 222    aatcacctgaaggctcttccagaggctgttgggaagctagaatctctagagatcctctct 281
              |||||||| ||||||||||| ||||| ||||| ||||||||  |||||||||||||||| 
Sbjct: 147055 aatcacctaaaggctcttcctgaggcggttggaaagctagagcctctagagatcctctcc 146996

                                                                          
Query: 282    gtgaggtacaacaatatcaggagccttccaactacaatggcatctctcactaagctgaag 341
              ||||| || |||||| ||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 146995 gtgagatataacaatctcaggagccttccaactacaatggcctctctcactaaactgaag 146936

                                                                          
Query: 342    gaggttgatgccagcttcaatgagcttgagtcgattccggagaacttttgctttgtcact 401
              ||||| ||||  |||||||| ||||| ||||| || || |||||||| |||||||  || 
Sbjct: 146935 gaggtcgatgtgagcttcaacgagctcgagtcaatccctgagaacttctgctttgctacc 146876

                                                                          
Query: 402    tctcttattaaactgaatgtcgggaacaactttgctgacatgaaatccctgcctcgctct 461
              ||||| ||||||||||| || |||||||| ||||||||| |  |||  ||||||||||||
Sbjct: 146875 tctctcattaaactgaacgttgggaacaattttgctgacctacaatatctgcctcgctct 146816

                                                                      
Query: 462    attggtaaccttgagatgctggaggagttggatataagcaataaccagattagggt 517
              ||||| ||||||||||||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 146815 attggcaaccttgagatgctggaagagttggatatgagcaacaatcagattagggt 146760



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 56     aaatcttgaggagcttgacgtgggt 80
              |||||||||||||||||| ||||||
Sbjct: 147221 aaatcttgaggagcttgatgtgggt 147197
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>dbj|AK065422.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013009P13, full
            insert sequence
          Length = 1811

 Score =  396 bits (200), Expect = e-107
 Identities = 362/416 (87%)
 Strand = Plus / Plus

                                                                        
Query: 102  cctgattcagtaggaagcctcacacgattgaagaagttactggttgagacaaatgatctt 161
            ||||||||| |||||||||| |||||| |||||||| || | || |||||||| || |||
Sbjct: 775  cctgattcaataggaagccttacacgactgaagaagctaattgtcgagacaaacgacctt 834

                                                                        
Query: 162  gatgagttgccttacacaataggtcattgtgtttcactggtggaattgcaggcaggctat 221
            ||||||||||||||||| || ||||| |||||||||||||| ||| |||||||||| |||
Sbjct: 835  gatgagttgccttacaccattggtcactgtgtttcactggttgaactgcaggcaggttat 894

                                                                        
Query: 222  aatcacctgaaggctcttccagaggctgttgggaagctagaatctctagagatcctctct 281
            |||||||| ||||||||||| ||||| ||||| ||||||||  |||||||||||||||| 
Sbjct: 895  aatcacctaaaggctcttcctgaggcggttggaaagctagagcctctagagatcctctcc 954

                                                                        
Query: 282  gtgaggtacaacaatatcaggagccttccaactacaatggcatctctcactaagctgaag 341
            ||||| || |||||| ||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 955  gtgagatataacaatctcaggagccttccaactacaatggcctctctcactaaactgaag 1014

                                                                        
Query: 342  gaggttgatgccagcttcaatgagcttgagtcgattccggagaacttttgctttgtcact 401
            ||||| ||||  |||||||| ||||| ||||| || || |||||||| |||||||  || 
Sbjct: 1015 gaggtcgatgtgagcttcaacgagctcgagtcaatccctgagaacttctgctttgctacc 1074

                                                                        
Query: 402  tctcttattaaactgaatgtcgggaacaactttgctgacatgaaatccctgcctcgctct 461
            ||||| ||||||||||| || |||||||| ||||||||| |  |||  ||||||||||||
Sbjct: 1075 tctctcattaaactgaacgttgggaacaattttgctgacctacaatatctgcctcgctct 1134

                                                                    
Query: 462  attggtaaccttgagatgctggaggagttggatataagcaataaccagattagggt 517
            ||||| ||||||||||||||||  ||||||||||| ||||| || |||||||||||
Sbjct: 1135 attggcaaccttgagatgctgggagagttggatatgagcaacaatcagattagggt 1190



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 56  aaatcttgaggagcttgacgtgggt 80
           |||||||||||||||||| ||||||
Sbjct: 729 aaatcttgaggagcttgatgtgggt 753
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>gb|AY090611.1| Brassica nigra PSR9 (psr9) mRNA, partial cds
          Length = 1606

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 81/98 (82%)
 Strand = Plus / Plus

                                                                        
Query: 414  ctgaatgtcgggaacaactttgctgacatgaaatccctgcctcgctctattggtaacctt 473
            ||||| || ||||||||||||||||| |||| |||  ||||  | ||  | || ||||||
Sbjct: 1289 ctgaacgtggggaacaactttgctgatatgatatcgttgccgaggtcgttagggaacctt 1348

                                                  
Query: 474  gagatgctggaggagttggatataagcaataaccagat 511
            |||||||| |||||| | ||||| ||||||||||||||
Sbjct: 1349 gagatgctcgaggagcttgatatcagcaataaccagat 1386
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>ref|NM_197844.1| Oryza sativa (japonica cultivar-group) putative leucine-rich repeat
            protein (OSJNBa0095C07.8), mRNA
          Length = 2012

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                     
Query: 471  cttgagatgctggaggagttggatataagcaataaccagat 511
            ||||||||||| |||||| |||| ||||||| |||||||||
Sbjct: 1342 cttgagatgctagaggagctggacataagcagtaaccagat 1382
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>gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 genomic sequence, complete
              sequence
          Length = 187707

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                       
Query: 471    cttgagatgctggaggagttggatataagcaataaccagat 511
              ||||||||||| |||||| |||| ||||||| |||||||||
Sbjct: 178132 cttgagatgctagaggagctggacataagcagtaaccagat 178172
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                         
Query: 471      cttgagatgctggaggagttggatataagcaataaccagat 511
                ||||||||||| |||||| |||| ||||||| |||||||||
Sbjct: 22173188 cttgagatgctagaggagctggacataagcagtaaccagat 22173228
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>dbj|AK102709.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033104H23, full
            insert sequence
          Length = 2099

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                     
Query: 471  cttgagatgctggaggagttggatataagcaataaccagat 511
            ||||||||||| |||||| |||| ||||||| |||||||||
Sbjct: 1396 cttgagatgctagaggagctggacataagcagtaaccagat 1436
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>dbj|AK065479.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025D12, full
           insert sequence
          Length = 1471

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 471 cttgagatgctggaggagttggatataagcaataaccagat 511
           ||||||||||| |||||| |||| ||||||| |||||||||
Sbjct: 942 cttgagatgctagaggagctggacataagcagtaaccagat 982
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                         
Query: 471      cttgagatgctggaggagttggatataagcaataaccagat 511
                ||||||||||| |||||| |||| ||||||| |||||||||
Sbjct: 22185251 cttgagatgctagaggagctggacataagcagtaaccagat 22185291
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>ref|NM_119712.4| Arabidopsis thaliana protein binding AT4G35470 mRNA, complete cds
          Length = 2474

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 468  aaccttgagatgctggaggagttggatataagcaataaccagat 511
            |||||||||||||| || ||| | |||||||||||||| |||||
Sbjct: 1587 aaccttgagatgcttgaagagcttgatataagcaataatcagat 1630
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>emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 83
          Length = 197859

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                          
Query: 468    aaccttgagatgctggaggagttggatataagcaataaccagat 511
              |||||||||||||| || ||| | |||||||||||||| |||||
Sbjct: 112681 aaccttgagatgcttgaagagcttgatataagcaataatcagat 112724
to top
>emb|AL117188.1|ATF15J1 Arabidopsis thaliana DNA chromosome 4, BAC clone F15J1, partial
             sequence (ESSA project)
          Length = 27408

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 468   aaccttgagatgctggaggagttggatataagcaataaccagat 511
             |||||||||||||| || ||| | |||||||||||||| |||||
Sbjct: 14330 aaccttgagatgcttgaagagcttgatataagcaataatcagat 14373
to top
>gb|AY849574.1| Arabidopsis thaliana plant intracellular Ras-group-related LRR
            protein 4 (PIRL4) mRNA, complete cds
          Length = 1650

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 468  aaccttgagatgctggaggagttggatataagcaataaccagat 511
            |||||||||||||| || ||| | |||||||||||||| |||||
Sbjct: 1357 aaccttgagatgcttgaagagcttgatataagcaataatcagat 1400
to top
>gb|AY128730.1| Arabidopsis thaliana putative protein (At4g35470) mRNA, complete cds
          Length = 1891

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 468  aaccttgagatgctggaggagttggatataagcaataaccagat 511
            |||||||||||||| || ||| | |||||||||||||| |||||
Sbjct: 1357 aaccttgagatgcttgaagagcttgatataagcaataatcagat 1400
to top
>gb|AY072324.1| Arabidopsis thaliana putative protein (At4g35470; F15J1.40) mRNA,
            complete cds
          Length = 2363

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 468  aaccttgagatgctggaggagttggatataagcaataaccagat 511
            |||||||||||||| || ||| | |||||||||||||| |||||
Sbjct: 1587 aaccttgagatgcttgaagagcttgatataagcaataatcagat 1630
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>emb|BX828819.1|CNS0A2KS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL41ZG08 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 2103

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 468  aaccttgagatgctggaggagttggatataagcaataaccagat 511
            |||||||||||||| || ||| | |||||||||||||| |||||
Sbjct: 1418 aaccttgagatgcttgaagagcttgatataagcaataatcagat 1461
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>emb|CR955012.2| Medicago truncatula chromosome 5 clone mth2-84f14, COMPLETE SEQUENCE
          Length = 117704

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 74/91 (81%)
 Strand = Plus / Plus

                                                                         
Query: 354   agcttcaatgagcttgagtcgattccggagaacttttgctttgtcacttctcttattaaa 413
             |||||||||||||||||||| ||||| |||| ||| || || |  || |||||| | |||
Sbjct: 98844 agcttcaatgagcttgagtccattcccgagagcttgtgtttcgctacctctcttgtcaaa 98903

                                            
Query: 414   ctgaatgtcgggaacaactttgctgacatga 444
              ||||  | || ||||| |||||||||||||
Sbjct: 98904 atgaacattggaaacaattttgctgacatga 98934
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>emb|CT025843.1| Medicago truncatula chromosome 5 clone mth2-17e22, COMPLETE SEQUENCE
          Length = 116514

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 390    tgctttgtcacttctcttatt 410
              |||||||||||||||||||||
Sbjct: 100153 tgctttgtcacttctcttatt 100173
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>gb|AC129217.3| Mus musculus BAC clone RP24-458M20 from chromosome 19, complete
             sequence
          Length = 175796

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 421   tcgggaacaactttgctgaca 441
             |||||||||||||||||||||
Sbjct: 71198 tcgggaacaactttgctgaca 71218
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>gb|AC073153.16| Mus musculus Strain C57BL6/J chromosome 19 BAC, RP23-49P8 Complete
              Sequence, complete sequence
          Length = 220143

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 421    tcgggaacaactttgctgaca 441
              |||||||||||||||||||||
Sbjct: 158799 tcgggaacaactttgctgaca 158779
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>gb|AF069953.1|AF069953 Mus musculus Gng3lg gene, partial sequence; and G protein gamma 3
            subunit (Gng3) gene, complete cds
          Length = 2053

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 421  tcgggaacaactttgctgaca 441
            |||||||||||||||||||||
Sbjct: 1294 tcgggaacaactttgctgaca 1274
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>emb|AL121819.6|CNS01DSL Human chromosome 14 DNA sequence BAC C-3201O4 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 143883

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 419   tgtcgggaacaactttgctga 439
             |||||||||||||||||||||
Sbjct: 91418 tgtcgggaacaactttgctga 91438
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>ref|NM_127299.2| Arabidopsis thaliana protein binding AT2G17440 mRNA, complete cds
          Length = 2048

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 468  aaccttgagatgctggaggagttggatataagcaataaccagat 511
            |||||||||| ||| || ||| | ||||| ||||||||||||||
Sbjct: 1500 aaccttgagaagctagaagagcttgatatgagcaataaccagat 1543



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 234  gctcttccagaggctgttgggaag 257
            ||||||||||| ||||||||||||
Sbjct: 1266 gctcttccagaagctgttgggaag 1289
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>gb|AC162910.2| Mus musculus BAC clone RP24-322O3 from chromosome 12, complete sequence
          Length = 183707

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     aggttagcaaatcttgagga 67
              ||||||||||||||||||||
Sbjct: 181039 aggttagcaaatcttgagga 181058
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>gb|AC132104.3| Mus musculus BAC clone RP24-364N7 from chromosome 9, complete sequence
          Length = 161545

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 193    tttcactggtggaattgcaggcag 216
              |||||||||||| |||||||||||
Sbjct: 154941 tttcactggtgggattgcaggcag 154918
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>gb|AE014306.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 3
             of 11 of the complete sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 399   acttctcttattaaactgaatgtc 422
             ||||||||||| ||||||||||||
Sbjct: 21686 acttctcttataaaactgaatgtc 21709
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>gb|AC121574.3| Mus musculus BAC clone RP23-241E9 from 14, complete sequence
          Length = 209230

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 313    ctacaatggcatctctcact 332
              ||||||||||||||||||||
Sbjct: 138426 ctacaatggcatctctcact 138445
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>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 423     gggaacaactttgctgacat 442
               ||||||||||||||||||||
Sbjct: 3326271 gggaacaactttgctgacat 3326290
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>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 423     gggaacaactttgctgacat 442
               ||||||||||||||||||||
Sbjct: 3208675 gggaacaactttgctgacat 3208694
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>emb|AL359677.19| Human DNA sequence from clone RP11-523E20 on chromosome 10, complete
             sequence
          Length = 118452

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   ttgtgtttcactggtggaat 207
             ||||||||||||||||||||
Sbjct: 97823 ttgtgtttcactggtggaat 97804
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>emb|AL359761.7| Human DNA sequence from clone RP11-202O6 on chromosome 13q32.3-34,
             complete sequence
          Length = 86883

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 399   acttctcttattaaactgaatgtc 422
             ||||||||||| ||||||||||||
Sbjct: 28577 acttctcttataaaactgaatgtc 28600
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>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 423     gggaacaactttgctgacat 442
               ||||||||||||||||||||
Sbjct: 3028030 gggaacaactttgctgacat 3028049
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>gb|AY849575.1| Arabidopsis thaliana plant intracellular Ras-group-related LRR
            protein 5 (PIRL5) mRNA, complete cds
          Length = 1581

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 468  aaccttgagatgctggaggagttggatataagcaataaccagat 511
            |||||||||| ||| || ||| | ||||| ||||||||||||||
Sbjct: 1309 aaccttgagaagctagaagagcttgatatgagcaataaccagat 1352



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 234  gctcttccagaggctgttgggaag 257
            ||||||||||| ||||||||||||
Sbjct: 1075 gctcttccagaagctgttgggaag 1098
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>gb|AE014177.1| Mus musculus piebald deletion region section 5 of 11 of the complete
              sequence
          Length = 400029

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    ctacaatggcatctctcact 332
              ||||||||||||||||||||
Sbjct: 134428 ctacaatggcatctctcact 134409
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>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 423     gggaacaactttgctgacat 442
               ||||||||||||||||||||
Sbjct: 3028664 gggaacaactttgctgacat 3028683
to top
>gb|AC024909.28| Homo sapiens 12 BAC RP11-823E8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 179151

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 393   tttgtcacttctcttattaa 412
             ||||||||||||||||||||
Sbjct: 73127 tttgtcacttctcttattaa 73108
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>gb|AC132568.3| Mus musculus BAC clone RP24-484M20 from chromosome 1, complete
            sequence
          Length = 133079

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 392  ctttgtcacttctcttattaaact 415
            |||| |||||||||||||||||||
Sbjct: 9804 ctttctcacttctcttattaaact 9781
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>gb|AC155635.3| Mus musculus BAC clone RP24-252C1 from chromosome 9, complete sequence
          Length = 154485

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 193    tttcactggtggaattgcaggcag 216
              |||||||||||| |||||||||||
Sbjct: 146572 tttcactggtgggattgcaggcag 146595
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 304      gccttccaactacaatggcatctc 327
                |||||||||||| |||||||||||
Sbjct: 22365704 gccttccaactaaaatggcatctc 22365727
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 187      attgtgtttcactggtggaa 206
                ||||||||||||||||||||
Sbjct: 22614214 attgtgtttcactggtggaa 22614195
to top
>emb|BX818857.1|CNS0A8UU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB1ZF07 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1851

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 468  aaccttgagatgctggaggagttggatataagcaataaccagat 511
            |||||||||| ||| || ||| | ||||| ||||||||||||||
Sbjct: 1326 aaccttgagaagctagaagagcttgatatgagcaataaccagat 1369



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 234  gctcttccagaggctgttgggaag 257
            ||||||||||| ||||||||||||
Sbjct: 1092 gctcttccagaagctgttgggaag 1115
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>gb|AC167420.1| Mus musculus BAC clone RP23-239F23 from chromosome 12, complete sequence
          Length = 185684

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 48     aggttagcaaatcttgagga 67
              ||||||||||||||||||||
Sbjct: 156658 aggttagcaaatcttgagga 156639
to top
>gb|AC002329.2|AC002329 Arabidopsis thaliana chromosome II section 100 of 255 of the complete
             sequence. Sequence from clones T23A1, F5J6, MJB20
          Length = 76170

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 468   aaccttgagatgctggaggagttggatataagcaataaccagat 511
             |||||||||| ||| || ||| | ||||| ||||||||||||||
Sbjct: 73835 aaccttgagaagctagaagagcttgatatgagcaataaccagat 73878



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 234   gctcttccagaggctgttgggaag 257
             ||||||||||| ||||||||||||
Sbjct: 73601 gctcttccagaagctgttgggaag 73624
to top
>dbj|AP006450.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1130E07
          Length = 152245

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   attgtgtttcactggtggaa 206
             ||||||||||||||||||||
Sbjct: 56134 attgtgtttcactggtggaa 56115
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>dbj|AP006162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1331F11
          Length = 132205

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 187    attgtgtttcactggtggaa 206
              ||||||||||||||||||||
Sbjct: 129415 attgtgtttcactggtggaa 129396
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>gb|AC163697.3| Gallus gallus BAC clone CH261-186A14 from chromosome unknown, complete
              sequence
          Length = 224517

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 260    agaatctctagagatcctct 279
              ||||||||||||||||||||
Sbjct: 143776 agaatctctagagatcctct 143757
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>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22,
              complete sequence
          Length = 147214

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 304    gccttccaactacaatggcatctc 327
              |||||||||||| |||||||||||
Sbjct: 116608 gccttccaactaaaatggcatctc 116631
to top
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 423     gggaacaactttgctgacat 442
               ||||||||||||||||||||
Sbjct: 3835466 gggaacaactttgctgacat 3835485
to top
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 423     gggaacaactttgctgacat 442
               ||||||||||||||||||||
Sbjct: 3768158 gggaacaactttgctgacat 3768177
to top
>gb|AC132241.3| Mus musculus BAC clone RP24-413I2 from chromosome 1, complete sequence
          Length = 138670

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 392   ctttgtcacttctcttattaaact 415
             |||| |||||||||||||||||||
Sbjct: 83113 ctttctcacttctcttattaaact 83090
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>gb|U28375.1|ECU28375 Escherichia coli K-12 genome; approximately 64 to 65 minutes
          Length = 55175

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 423   gggaacaactttgctgacat 442
             ||||||||||||||||||||
Sbjct: 39822 gggaacaactttgctgacat 39841
to top
>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 423     gggaacaactttgctgacat 442
               ||||||||||||||||||||
Sbjct: 3198660 gggaacaactttgctgacat 3198679


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,267,390
Number of Sequences: 3902068
Number of extensions: 4267390
Number of successful extensions: 82832
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82561
Number of HSP's gapped (non-prelim): 271
length of query: 517
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 494
effective length of database: 17,143,297,704
effective search space: 8468789065776
effective search space used: 8468789065776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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