| Clone Name | bags35l11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 153 bits (77), Expect = 8e-34 Identities = 165/193 (85%), Gaps = 1/193 (0%) Strand = Plus / Minus Query: 2 gttagcttatttatgcagtctaaagaggcaactccgtgtgtgatacct-aggataacaca 60 |||||||| ||||| ||||||||||||||| | || | |||||||||| ||||| ||||| Sbjct: 19688864 gttagcttgtttattcagtctaaagaggcatccccatatgtgatacctcaggatgacaca 19688805 Query: 61 ctaagattttcacattgtgtccctcatcatttcatgcgtgggactgaaagagaaggcatt 120 ||||| ||||||||||||||||||| |||| ||| ||| || |||| |||||| ||| Sbjct: 19688804 ctaaggttttcacattgtgtccctcgtcatacgatgattggaaccgaaaaagaagggatt 19688745 Query: 121 ccagtaggagctattgaacttgatcctgcagcacttccccttaacttggaagaggctttt 180 |||| ||| |||||||||||||||||||| || ||||| || ||||| | || ||||||| Sbjct: 19688744 ccagaaggggctattgaacttgatcctgcggcgcttcctctgaactttggagtggctttt 19688685 Query: 181 gcttctgttgttc 193 ||||||||||||| Sbjct: 19688684 gcttctgttgttc 19688672 Score = 99.6 bits (50), Expect = 1e-17 Identities = 137/166 (82%) Strand = Plus / Minus Query: 432 tcctgactcagaattctatgaatttacagaaataaggttgattcagaagttcgaacctgg 491 |||||| |||||||||| ||||||| |||||||||| | ||| || || || ||||||| Sbjct: 19688427 tcctgaatcagaattctttgaattttcagaaataagatcgatccacaaatttcaacctgg 19688368 Query: 492 acaggtctgggctctttatagtgatatggacaagttccccaattactacgccatcataaa 551 ||| |||||||||| ||||||||| | || ||||||||||||||||| ||| |||||| Sbjct: 19688367 gcagatctgggctctctatagtgatgtagataagttccccaattactatgcctgcataaa 19688308 Query: 552 gaaagtcgatctcaagaataataaagtacaagtgaaatggcttgat 597 | || ||| ||||||||||| || | ||||| | |||||||||| Sbjct: 19688307 aactgttgatgtcaagaataatgaactgcaagtaagatggcttgat 19688262 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 taggataacacactaagattt 69 ||||||||||||||||||||| Sbjct: 29029479 taggataacacactaagattt 29029499
>dbj|AP005723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0001B21 Length = 143722 Score = 153 bits (77), Expect = 8e-34 Identities = 165/193 (85%), Gaps = 1/193 (0%) Strand = Plus / Minus Query: 2 gttagcttatttatgcagtctaaagaggcaactccgtgtgtgatacct-aggataacaca 60 |||||||| ||||| ||||||||||||||| | || | |||||||||| ||||| ||||| Sbjct: 73320 gttagcttgtttattcagtctaaagaggcatccccatatgtgatacctcaggatgacaca 73261 Query: 61 ctaagattttcacattgtgtccctcatcatttcatgcgtgggactgaaagagaaggcatt 120 ||||| ||||||||||||||||||| |||| ||| ||| || |||| |||||| ||| Sbjct: 73260 ctaaggttttcacattgtgtccctcgtcatacgatgattggaaccgaaaaagaagggatt 73201 Query: 121 ccagtaggagctattgaacttgatcctgcagcacttccccttaacttggaagaggctttt 180 |||| ||| |||||||||||||||||||| || ||||| || ||||| | || ||||||| Sbjct: 73200 ccagaaggggctattgaacttgatcctgcggcgcttcctctgaactttggagtggctttt 73141 Query: 181 gcttctgttgttc 193 ||||||||||||| Sbjct: 73140 gcttctgttgttc 73128 Score = 99.6 bits (50), Expect = 1e-17 Identities = 137/166 (82%) Strand = Plus / Minus Query: 432 tcctgactcagaattctatgaatttacagaaataaggttgattcagaagttcgaacctgg 491 |||||| |||||||||| ||||||| |||||||||| | ||| || || || ||||||| Sbjct: 72883 tcctgaatcagaattctttgaattttcagaaataagatcgatccacaaatttcaacctgg 72824 Query: 492 acaggtctgggctctttatagtgatatggacaagttccccaattactacgccatcataaa 551 ||| |||||||||| ||||||||| | || ||||||||||||||||| ||| |||||| Sbjct: 72823 gcagatctgggctctctatagtgatgtagataagttccccaattactatgcctgcataaa 72764 Query: 552 gaaagtcgatctcaagaataataaagtacaagtgaaatggcttgat 597 | || ||| ||||||||||| || | ||||| | |||||||||| Sbjct: 72763 aactgttgatgtcaagaataatgaactgcaagtaagatggcttgat 72718
>dbj|AK070898.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023071K08, full insert sequence Length = 4268 Score = 153 bits (77), Expect = 8e-34 Identities = 165/193 (85%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 2 gttagcttatttatgcagtctaaagaggcaactccgtgtgtgatacct-aggataacaca 60 |||||||| ||||| ||||||||||||||| | || | |||||||||| ||||| ||||| Sbjct: 2686 gttagcttgtttattcagtctaaagaggcatccccatatgtgatacctcaggatgacaca 2745 Query: 61 ctaagattttcacattgtgtccctcatcatttcatgcgtgggactgaaagagaaggcatt 120 ||||| ||||||||||||||||||| |||| ||| ||| || |||| |||||| ||| Sbjct: 2746 ctaaggttttcacattgtgtccctcgtcatacgatgattggaaccgaaaaagaagggatt 2805 Query: 121 ccagtaggagctattgaacttgatcctgcagcacttccccttaacttggaagaggctttt 180 |||| ||| |||||||||||||||||||| || ||||| || ||||| | || ||||||| Sbjct: 2806 ccagaaggggctattgaacttgatcctgcggcgcttcctctgaactttggagtggctttt 2865 Query: 181 gcttctgttgttc 193 ||||||||||||| Sbjct: 2866 gcttctgttgttc 2878 Score = 99.6 bits (50), Expect = 1e-17 Identities = 137/166 (82%) Strand = Plus / Plus Query: 432 tcctgactcagaattctatgaatttacagaaataaggttgattcagaagttcgaacctgg 491 |||||| |||||||||| ||||||| |||||||||| | ||| || || || ||||||| Sbjct: 3123 tcctgaatcagaattctttgaattttcagaaataagatcgatccacaaatttcaacctgg 3182 Query: 492 acaggtctgggctctttatagtgatatggacaagttccccaattactacgccatcataaa 551 ||| |||||||||| ||||||||| | || ||||||||||||||||| ||| |||||| Sbjct: 3183 gcagatctgggctctctatagtgatgtagataagttccccaattactatgcctgcataaa 3242 Query: 552 gaaagtcgatctcaagaataataaagtacaagtgaaatggcttgat 597 | || ||| ||||||||||| || | ||||| | |||||||||| Sbjct: 3243 aactgttgatgtcaagaataatgaactgcaagtaagatggcttgat 3288
>dbj|AK059642.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-B09, full insert sequence Length = 1518 Score = 141 bits (71), Expect = 3e-30 Identities = 156/183 (85%), Gaps = 1/183 (0%) Strand = Plus / Plus Query: 12 ttatgcagtctaaagaggcaactccgtgtgtgatacct-aggataacacactaagatttt 70 |||| ||||||||||||||| | || | |||||||||| ||||| |||||||||| |||| Sbjct: 1 ttattcagtctaaagaggcatccccatatgtgatacctcaggatgacacactaaggtttt 60 Query: 71 cacattgtgtccctcatcatttcatgcgtgggactgaaagagaaggcattccagtaggag 130 ||||||||||||||| |||| ||| ||| || |||| |||||| ||||||| ||| | Sbjct: 61 cacattgtgtccctcgtcatacgatgattggaaccgaaaaagaagggattccagaagggg 120 Query: 131 ctattgaacttgatcctgcagcacttccccttaacttggaagaggcttttgcttctgttg 190 ||||||||||||||||||| || ||||| || ||||| | || ||||||||||||||||| Sbjct: 121 ctattgaacttgatcctgcggcgcttcctctgaactttggagtggcttttgcttctgttg 180 Query: 191 ttc 193 ||| Sbjct: 181 ttc 183 Score = 99.6 bits (50), Expect = 1e-17 Identities = 137/166 (82%) Strand = Plus / Plus Query: 432 tcctgactcagaattctatgaatttacagaaataaggttgattcagaagttcgaacctgg 491 |||||| |||||||||| ||||||| |||||||||| | ||| || || || ||||||| Sbjct: 428 tcctgaatcagaattctttgaattttcagaaataagatcgatccacaaatttcaacctgg 487 Query: 492 acaggtctgggctctttatagtgatatggacaagttccccaattactacgccatcataaa 551 ||| |||||||||| ||||||||| | || ||||||||||||||||| ||| |||||| Sbjct: 488 gcagatctgggctctctatagtgatgtagataagttccccaattactatgcctgcataaa 547 Query: 552 gaaagtcgatctcaagaataataaagtacaagtgaaatggcttgat 597 | || ||| ||||||||||| || | ||||| | |||||||||| Sbjct: 548 aactgttgatgtcaagaataatgaactgcaagtaagatggcttgat 593
>gb|AC131335.11| Mus musculus chromosome 8, clone RP23-32D9, complete sequence Length = 190133 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 434 ctgactcagaattctatgaattt 456 ||||||||||||||||||||||| Sbjct: 8542 ctgactcagaattctatgaattt 8520
>gb|AC182231.2| Mus musculus BAC clone RP23-356C18 from chromosome 8, complete sequence Length = 206310 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 434 ctgactcagaattctatgaattt 456 ||||||||||||||||||||||| Sbjct: 138183 ctgactcagaattctatgaattt 138161
>ref|XM_213879.3| PREDICTED: Rattus norvegicus phosphoinositide-3-kinase, class 2, beta polypeptide (predicted) (Pik3c2b_predicted), mRNA Length = 5265 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 348 gaaagagcatcatactccatct 369 |||||||||||||||||||||| Sbjct: 134 gaaagagcatcatactccatct 113
>gb|AY449460.1| Oikopleura dioica clone BACOIKO004 7xk22, complete sequence Length = 131867 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 434 ctgactcagaattctatgaatttaca 459 ||||||||||||||||||| |||||| Sbjct: 120593 ctgactcagaattctatgattttaca 120568
>gb|AC167707.2| Reniera sp. JGI-2005 clone JGIBAYC-9L12, complete sequence Length = 40570 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 tgctggttcatccagtggaat 254 ||||||||||||||||||||| Sbjct: 22283 tgctggttcatccagtggaat 22263
>gb|AC007387.4| Homo sapiens BAC clone RP11-372J12 from 2, complete sequence Length = 165704 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 caaaggaagagaagaaagagc 355 ||||||||||||||||||||| Sbjct: 101967 caaaggaagagaagaaagagc 101947
>gb|AC132955.3| Mus musculus BAC clone RP24-266J20 from chromosome 6, complete sequence Length = 174507 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 ttgcttctgttgttctggaaa 199 ||||||||||||||||||||| Sbjct: 148388 ttgcttctgttgttctggaaa 148408
>gb|AC116679.9| Mus musculus chromosome 12, clone RP23-391I19, complete sequence Length = 261992 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 agcaacaaaggaagagaagaaagag 354 ||||||||||||||| ||||||||| Sbjct: 110894 agcaacaaaggaagaaaagaaagag 110870
>emb|AL513484.6| Human DNA sequence from clone RP13-223P22 on chromosome Xq11.1-13.1, complete sequence Length = 59637 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 608 agggagaggaggagaaaagac 628 ||||||||||||||||||||| Sbjct: 13178 agggagaggaggagaaaagac 13198
>emb|AL161730.9| Human DNA sequence from clone RP11-441I5 on chromosome 9 Contains the DMRTA1 gene for DMRT-like family A1 (DMO) and a CpG island, complete sequence Length = 170066 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 acaaaggaagagaagaaagag 354 ||||||||||||||||||||| Sbjct: 1935 acaaaggaagagaagaaagag 1955
>emb|AL138923.9| Human DNA sequence from clone RP11-397J18 on chromosome 10 Contains a RAB11B, member RAS oncogene family (H-YPT3) pseudogene, 5' end of a novel gene (FLJ33990) and one CpG island, complete sequence Length = 85322 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 gactgaaagagaaggcattcc 122 ||||||||||||||||||||| Sbjct: 34069 gactgaaagagaaggcattcc 34089
>gb|AC104021.5| Homo sapiens chromosome 8, clone RP11-378A12, complete sequence Length = 135998 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 caaaggaagagaagaaagagc 355 ||||||||||||||||||||| Sbjct: 33130 caaaggaagagaagaaagagc 33150
>gb|AC104419.3| Homo sapiens chromosome 8, clone RP11-134O21, complete sequence Length = 164781 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 caaaggaagagaagaaagagc 355 ||||||||||||||||||||| Sbjct: 126695 caaaggaagagaagaaagagc 126715
>ref|NM_008867.1| Mus musculus phospholipase A2 receptor 1 (Pla2r1), mRNA Length = 5569 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 acaaaggaagagaagaaagag 354 ||||||||||||||||||||| Sbjct: 2830 acaaaggaagagaagaaagag 2850
>dbj|AK162513.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530043L22 product:unclassifiable, full insert sequence Length = 3385 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 acaaaggaagagaagaaagag 354 ||||||||||||||||||||| Sbjct: 931 acaaaggaagagaagaaagag 951
>gb|AC006544.19| Homo sapiens chromosome 2 clone bac91a19 map 2p13, complete sequence Length = 234523 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 caaaggaagagaagaaagagc 355 ||||||||||||||||||||| Sbjct: 231064 caaaggaagagaagaaagagc 231044
>gb|AC013460.7| Homo sapiens BAC clone RP11-249F13 from 2, complete sequence Length = 156958 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 acaaaggaagagaagaaagag 354 ||||||||||||||||||||| Sbjct: 141394 acaaaggaagagaagaaagag 141374
>emb|BX679662.5| Mouse DNA sequence from clone RP23-364B23 on chromosome 2, complete sequence Length = 59823 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 acaaaggaagagaagaaagag 354 ||||||||||||||||||||| Sbjct: 56415 acaaaggaagagaagaaagag 56395
>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0596H10 Length = 166570 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 taggataacacactaagattt 69 ||||||||||||||||||||| Sbjct: 44466 taggataacacactaagattt 44486
>emb|CT573218.4| CH250-10B18, complete sequence Length = 190487 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 acaaaggaagagaagaaagag 354 ||||||||||||||||||||| Sbjct: 123418 acaaaggaagagaagaaagag 123398
>dbj|D30779.1|MUSPLA2IR Mus musculus mRNA for phospholipase A2 receptor, complete cds Length = 5569 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 acaaaggaagagaagaaagag 354 ||||||||||||||||||||| Sbjct: 2830 acaaaggaagagaagaaagag 2850
>gb|AY684928.1| Hordeum vulgare subsp. vulgare Lem2 gene, promoter region, 5' UTR and partial cds Length = 1700 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 atacctaggataacacactaagat 67 |||||||||||||||| ||||||| Sbjct: 609 atacctaggataacacgctaagat 632
>gb|AC134402.9| Mus musculus chromosome 5, clone RP24-301D19, complete sequence Length = 199834 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 agcaacaaaggaagagaagaaaga 353 ||||||||||||||||||| |||| Sbjct: 102705 agcaacaaaggaagagaaggaaga 102728
>ref|NM_123137.2| Arabidopsis thaliana CAM1 (CALMODULIN 1); calcium ion binding AT5G37780 (CAM1) mRNA, complete cds Length = 774 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 acaaaggaagagaagaaaga 353 |||||||||||||||||||| Sbjct: 51 acaaaggaagagaagaaaga 70
>gb|AC114667.12| Mus musculus chromosome 1, clone RP24-175L10, complete sequence Length = 171306 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 aagagcaacaaaggaagagaagaa 350 |||||||||||||||||| ||||| Sbjct: 152904 aagagcaacaaaggaagaaaagaa 152927
>ref|XM_523190.1| PREDICTED: Pan troglodytes similar to cytosolic phospholipase A2 delta (LOC467795), mRNA Length = 975 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 602 gtccccagggagaggaggag 621 |||||||||||||||||||| Sbjct: 422 gtccccagggagaggaggag 441
>gb|AC159092.11| Mus musculus chromosome 1, clone RP23-103C13, complete sequence Length = 196891 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 gcttctgttgttctggaaag 200 |||||||||||||||||||| Sbjct: 5631 gcttctgttgttctggaaag 5612
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 aaaggaagagaagaaagagc 355 |||||||||||||||||||| Sbjct: 3127091 aaaggaagagaagaaagagc 3127110
>gb|BC028182.1| Homo sapiens chromosome condensation-related SMC-associated protein 1, mRNA (cDNA clone MGC:39941 IMAGE:5395775), complete cds Length = 4513 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 tccccagggagaggaggaga 622 |||||||||||||||||||| Sbjct: 1546 tccccagggagaggaggaga 1565
>gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome Length = 1545895 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 caaaggaagagaagaaagag 354 |||||||||||||||||||| Sbjct: 466976 caaaggaagagaagaaagag 466995
>gb|AC156605.13| Mus musculus chromosome 7, clone RP23-305G5, complete sequence Length = 234816 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 caacaaaggaagagaagaaa 351 |||||||||||||||||||| Sbjct: 118463 caacaaaggaagagaagaaa 118444
>gb|AC114986.13| Mus musculus chromosome 1, clone RP23-242G7, complete sequence Length = 195146 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 gcttctgttgttctggaaag 200 |||||||||||||||||||| Sbjct: 44261 gcttctgttgttctggaaag 44242
>ref|XM_549382.2| PREDICTED: Canis familiaris similar to H/ACA ribonucleoprotein complex subunit 4 (Dyskerin) (Nucleolar protein family A member 4) (snoRNP protein DKC1) (Nopp140-associated protein of 57 kDa) (Nucleolar protein NAP57) (CBF5 homolog) (LOC492263), mRNA Length = 1635 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 taaagaggcaactccgtgtg 41 |||||||||||||||||||| Sbjct: 650 taaagaggcaactccgtgtg 669
>ref|XM_860136.1| PREDICTED: Canis familiaris hypothetical protein LOC609774 (LOC609774), mRNA Length = 1831 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 agcaacaaaggaagagaaga 349 |||||||||||||||||||| Sbjct: 632 agcaacaaaggaagagaaga 651
>ref|XM_858091.1| PREDICTED: Canis familiaris similar to Mitogen-activated protein kinase 6 (Extracellular signal-regulated kinase 3) (ERK-3) (MAP kinase isoform p97) (p97-MAPK), transcript variant 4 (LOC478311), mRNA Length = 4088 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 agcaacaaaggaagagaaga 349 |||||||||||||||||||| Sbjct: 249 agcaacaaaggaagagaaga 268
>ref|XM_858073.1| PREDICTED: Canis familiaris similar to Mitogen-activated protein kinase 6 (Extracellular signal-regulated kinase 3) (ERK-3) (MAP kinase isoform p97) (p97-MAPK), transcript variant 3 (LOC478311), mRNA Length = 4145 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 agcaacaaaggaagagaaga 349 |||||||||||||||||||| Sbjct: 249 agcaacaaaggaagagaaga 268
>ref|XM_535486.2| PREDICTED: Canis familiaris similar to Mitogen-activated protein kinase 6 (Extracellular signal-regulated kinase 3) (ERK-3) (MAP kinase isoform p97) (p97-MAPK), transcript variant 1 (LOC478311), mRNA Length = 4202 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 agcaacaaaggaagagaaga 349 |||||||||||||||||||| Sbjct: 261 agcaacaaaggaagagaaga 280
>ref|XM_846005.1| PREDICTED: Canis familiaris similar to Mitogen-activated protein kinase 6 (Extracellular signal-regulated kinase 3) (ERK-3) (MAP kinase isoform p97) (p97-MAPK), transcript variant 2 (LOC478311), mRNA Length = 4216 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 agcaacaaaggaagagaaga 349 |||||||||||||||||||| Sbjct: 275 agcaacaaaggaagagaaga 294
>gb|AC122931.4| Mus musculus BAC clone RP23-15C15 from 9, complete sequence Length = 192274 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 567 gaataataaagtacaagtgaaatggcttgatc 598 |||||||||||||||||| | |||||| |||| Sbjct: 105365 gaataataaagtacaagtcatatggctagatc 105396
>emb|CR381596.11| Zebrafish DNA sequence from clone DKEY-230M3 in linkage group 3, complete sequence Length = 157536 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 gttcatccagtggaattaat 258 |||||||||||||||||||| Sbjct: 140085 gttcatccagtggaattaat 140104
>gb|AC126410.12| Mus musculus chromosome 5, clone RP23-368H6, complete sequence Length = 187058 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 agcaacaaaggaagagaagaaaga 353 ||||||||||||||||||| |||| Sbjct: 155452 agcaacaaaggaagagaaggaaga 155429
>gb|AC129544.7| Mus musculus chromosome 12, clone RP23-258H6, complete sequence Length = 232275 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 328 agagcaacaaaggaagagaagaaa 351 |||| ||||||||||||||||||| Sbjct: 108415 agaggaacaaaggaagagaagaaa 108392
>gb|AC166831.3| Mus musculus BAC clone RP23-270P14 from chromosome 16, complete sequence Length = 230269 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 caacaaaggaagagaagaaa 351 |||||||||||||||||||| Sbjct: 107582 caacaaaggaagagaagaaa 107563
>gb|AC163440.3| Mus musculus chromosome 1, clone RP23-445K8, complete sequence Length = 194714 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 aagagcaacaaaggaagagaagaa 350 |||||||||||||||||| ||||| Sbjct: 133793 aagagcaacaaaggaagaaaagaa 133770
>emb|AL391832.10| Human DNA sequence from clone RP11-443B7 on chromosome 1 Contains two novel genes (LOC284527), complete sequence Length = 144648 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 608 agggagaggaggagaaaaga 627 |||||||||||||||||||| Sbjct: 76610 agggagaggaggagaaaaga 76629
>emb|AL355003.10| Human DNA sequence from clone RP11-753M10 on chromosome 13, complete sequence Length = 133309 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 608 agggagaggaggagaaaaga 627 |||||||||||||||||||| Sbjct: 36510 agggagaggaggagaaaaga 36491
>emb|CR392040.6| Zebrafish DNA sequence from clone DKEY-157H10 in linkage group 22, complete sequence Length = 108494 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ttctgttgttctggaaagca 202 |||||||||||||||||||| Sbjct: 10854 ttctgttgttctggaaagca 10873
>dbj|AK128354.1| Homo sapiens cDNA FLJ46496 fis, clone THYMU3028702, highly similar to Homo sapiens chromosome condensation-related SMC-associated protein 1 Length = 4556 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 tccccagggagaggaggaga 622 |||||||||||||||||||| Sbjct: 1446 tccccagggagaggaggaga 1465
>dbj|AK125155.1| Homo sapiens cDNA FLJ43165 fis, clone FCBBF3002163, highly similar to Homo sapiens chromosome condensation-related SMC-associated protein 1 Length = 3263 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 tccccagggagaggaggaga 622 |||||||||||||||||||| Sbjct: 1189 tccccagggagaggaggaga 1208
>ref|NM_014865.2| Homo sapiens chromosome condensation-related SMC-associated protein 1 (CNAP1), mRNA Length = 4513 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 tccccagggagaggaggaga 622 |||||||||||||||||||| Sbjct: 1546 tccccagggagaggaggaga 1565
>gb|AC025264.16| Homo sapiens 12 BAC RP11-704P17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 193626 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 agaaggttggggaggtgcaa 294 |||||||||||||||||||| Sbjct: 187348 agaaggttggggaggtgcaa 187367
>dbj|AK022511.1| Homo sapiens cDNA FLJ12449 fis, clone NT2RM1000314, highly similar to Human mRNA for KIAA0159 gene Length = 4349 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 tccccagggagaggaggaga 622 |||||||||||||||||||| Sbjct: 1534 tccccagggagaggaggaga 1553
>gb|AC087277.11| Homo sapiens chromosome 11, clone RP11-514F3, complete sequence Length = 196859 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 566 agaataataaagtacaagtgaaat 589 |||||||| ||||||||||||||| Sbjct: 94710 agaataatgaagtacaagtgaaat 94733
>ref|NM_165579.1| Drosophila melanogaster spenito CG2910-RA, transcript variant A (nito), mRNA Length = 3983 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ggacaagttccccaattact 538 |||||||||||||||||||| Sbjct: 1074 ggacaagttccccaattact 1093
>ref|NM_136495.2| Drosophila melanogaster spenito CG2910-RB, transcript variant B (nito), mRNA Length = 3102 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ggacaagttccccaattact 538 |||||||||||||||||||| Sbjct: 1074 ggacaagttccccaattact 1093
>gb|AC023738.3| Drosophila melanogaster X BAC RP98-6F4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 103196 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 gggactgaaagagaaggcat 119 |||||||||||||||||||| Sbjct: 73516 gggactgaaagagaaggcat 73535
>gb|AC097638.2| Homo sapiens chromosome 3 clone RP11-353H3, complete sequence Length = 170330 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 aagattttcacattgtgtcc 82 |||||||||||||||||||| Sbjct: 4165 aagattttcacattgtgtcc 4146
>gb|AY069434.1| Drosophila melanogaster LD14125 full length cDNA Length = 2308 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ggacaagttccccaattact 538 |||||||||||||||||||| Sbjct: 303 ggacaagttccccaattact 322
>gb|AY059809.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 761 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 acaaaggaagagaagaaaga 353 |||||||||||||||||||| Sbjct: 52 acaaaggaagagaagaaaga 71
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 taataaagtacaagtgaaat 589 |||||||||||||||||||| Sbjct: 463812 taataaagtacaagtgaaat 463831
>gb|AC129776.3| Mus musculus BAC clone RP23-197A15 from chromosome 16, complete sequence Length = 219345 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 caacaaaggaagagaagaaa 351 |||||||||||||||||||| Sbjct: 63446 caacaaaggaagagaagaaa 63427
>gb|AC007084.7|AC007084 Drosophila melanogaster, chromosome 2R, region 43F-44A, BAC clone BACR26A16, complete sequence Length = 139410 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ggacaagttccccaattact 538 |||||||||||||||||||| Sbjct: 16855 ggacaagttccccaattact 16836
>gb|AC069164.11|AC069164 Homo sapiens chromosome 13 clone RP11-338F18, complete sequence Length = 169903 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 608 agggagaggaggagaaaaga 627 |||||||||||||||||||| Sbjct: 75077 agggagaggaggagaaaaga 75058
>gb|AC067950.5| Homo sapiens BAC clone RP11-375B23 from 2, complete sequence Length = 101721 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ttgaacttgatcctgcagca 153 |||||||||||||||||||| Sbjct: 41979 ttgaacttgatcctgcagca 41998
>gb|AC006064.10| Homo sapiens 12 PAC RP5-940J5 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 172571 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 tccccagggagaggaggaga 622 |||||||||||||||||||| Sbjct: 74939 tccccagggagaggaggaga 74958
>emb|BX511034.11| Zebrafish DNA sequence from clone DKEY-57C15 in linkage group 22, complete sequence Length = 284624 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ttctgttgttctggaaagca 202 |||||||||||||||||||| Sbjct: 121726 ttctgttgttctggaaagca 121745
>dbj|AB016873.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K22F20 Length = 64827 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 acaaaggaagagaagaaaga 353 |||||||||||||||||||| Sbjct: 7907 acaaaggaagagaagaaaga 7888
>dbj|D63880.1| Homo sapiens mRNA for KIAA0159 gene, partial cds Length = 5547 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 tccccagggagaggaggaga 622 |||||||||||||||||||| Sbjct: 2287 tccccagggagaggaggaga 2306
>gb|AF145664.1|AF145664 Drosophila melanogaster clone GH11110 BcDNA.GH11110 (BcDNA.GH11110) mRNA, complete cds Length = 3113 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ggacaagttccccaattact 538 |||||||||||||||||||| Sbjct: 1074 ggacaagttccccaattact 1093
>gb|AE003839.4| Drosophila melanogaster chromosome 2R, section 11 of 73 of the complete sequence Length = 254177 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ggacaagttccccaattact 538 |||||||||||||||||||| Sbjct: 175333 ggacaagttccccaattact 175352
>emb|AL358340.6|CNS05TEB Human chromosome 14 DNA sequence BAC R-1007I4 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 201163 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 608 agggagaggaggagaaaaga 627 |||||||||||||||||||| Sbjct: 80993 agggagaggaggagaaaaga 81012
>gb|AE003447.5| Drosophila melanogaster chromosome X, section 31 of 74 of the complete sequence Length = 288721 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 gggactgaaagagaaggcat 119 |||||||||||||||||||| Sbjct: 51216 gggactgaaagagaaggcat 51197
>dbj|AB090876.1| Homo sapiens cPLA2 delta mRNA for cytosolic phospholipase A2 delta, complete cds Length = 3587 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 602 gtccccagggagaggaggag 621 |||||||||||||||||||| Sbjct: 478 gtccccagggagaggaggag 497
>dbj|AP002364.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-121L10, complete sequence Length = 165703 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 608 agggagaggaggagaaaaga 627 |||||||||||||||||||| Sbjct: 58425 agggagaggaggagaaaaga 58444
>gb|AC005448.1|AC005448 Drosophila melanogaster, chromosome 2R, region 44A2-44A3, P1 clone DS06886, complete sequence Length = 86889 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ggacaagttccccaattact 538 |||||||||||||||||||| Sbjct: 38507 ggacaagttccccaattact 38526
>gb|AC154589.3| Mus musculus BAC clone RP23-367D5 from chromosome 14, complete sequence Length = 205889 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 ggcttttgcttctgttgttc 193 |||||||||||||||||||| Sbjct: 20426 ggcttttgcttctgttgttc 20445
>gb|AC005187.1|AC005187 Homo sapiens chromosome 4 clone B153K6 map 4q25, complete sequence Length = 114621 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 608 agggagaggaggagaaaaga 627 |||||||||||||||||||| Sbjct: 40291 agggagaggaggagaaaaga 40310
>gb|AC139184.4| Mus musculus BAC clone RP24-114G18 from 8, complete sequence Length = 166104 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ggctctttacaagagcaaca 336 |||||||||||||||||||| Sbjct: 57980 ggctctttacaagagcaaca 57961
>gb|AC125134.3| Mus musculus BAC clone RP24-316C22 from 1, complete sequence Length = 188348 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 gcttctgttgttctggaaag 200 |||||||||||||||||||| Sbjct: 93903 gcttctgttgttctggaaag 93884
>gb|AC132353.3| Mus musculus BAC clone RP24-100I23 from 17, complete sequence Length = 202603 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 gaggaatctgatggcattgt 413 |||||||||||||||||||| Sbjct: 107160 gaggaatctgatggcattgt 107179
>gb|AC139382.3| Mus musculus BAC clone RP23-30B24 from 12, complete sequence Length = 180698 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 608 agggagaggaggagaaaaga 627 |||||||||||||||||||| Sbjct: 44160 agggagaggaggagaaaaga 44179
>ref|NM_178034.2| Homo sapiens phospholipase A2, group IVD (cytosolic) (PLA2G4D), mRNA Length = 3587 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 602 gtccccagggagaggaggag 621 |||||||||||||||||||| Sbjct: 478 gtccccagggagaggaggag 497
>gb|AC159006.2| Mus musculus BAC clone RP23-36P21 from chromosome 14, complete sequence Length = 245591 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 ggcttttgcttctgttgttc 193 |||||||||||||||||||| Sbjct: 119497 ggcttttgcttctgttgttc 119516
>emb|AL954301.5| Mouse DNA sequence from clone RP23-350P7 on chromosome 4, complete sequence Length = 18636 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 430 tgtcctgactcagaattctatgaa 453 ||||||||||| |||||||||||| Sbjct: 16373 tgtcctgactctgaattctatgaa 16350
>gb|AC135852.2| Homo sapiens chromosome 3 clone RP11-713E15, complete sequence Length = 18793 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 aagattttcacattgtgtcc 82 |||||||||||||||||||| Sbjct: 1708 aagattttcacattgtgtcc 1727
>dbj|AP004217.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1137H10 Length = 142432 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 608 agggagaggaggagaaaaga 627 |||||||||||||||||||| Sbjct: 63243 agggagaggaggagaaaaga 63262 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,905,850 Number of Sequences: 3902068 Number of extensions: 6905850 Number of successful extensions: 168213 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 167794 Number of HSP's gapped (non-prelim): 411 length of query: 638 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 615 effective length of database: 17,143,297,704 effective search space: 10543128087960 effective search space used: 10543128087960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)