>PIP_AERSO (P46547) Proline iminopeptidase (EC 3.4.11.5) (PIP) (Prolyl|
           aminopeptidase) (PAP)
          Length = 424

 Score = 88.2 bits (217), Expect = 5e-18
 Identities = 42/92 (45%), Positives = 57/92 (61%)
 Frame = +2

Query: 71  FLKEFDMWVGFDQNPLYALLHESIYCEGSSSKWTADKIFNENRSXXDPVKVXXEGRPVYL 250
           FL +      F+ NP++A+LHE IYCEG++S W A+++  E      P     +G+    
Sbjct: 265 FLYQVQAMQPFNTNPVFAILHELIYCEGAASHWAAERVRGEF-----PALAWAQGKDFAF 319

Query: 251 TGEMVFPCFFDEINALRPLKEAAHLLAEKEDW 346
           TGEM+FP  F++   L PLKEAAHLLAEK DW
Sbjct: 320 TGEMIFPWMFEQFRELIPLKEAAHLLAEKADW 351

>ATPG_CORJK (Q4JUJ9) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1|
           sector gamma subunit)
          Length = 326

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = +2

Query: 26  DPVLVPGAKKSISYYFLKEFDM---WVGFDQNPLYALLHE 136
           D VL     K ISYY  +  D+   W G+ Q+P YA  H+
Sbjct: 112 DVVLYVSGNKGISYYNFRGEDIAGAWSGYSQDPDYAATHD 151

>CSBB_BACSU (Q45539) Putative glycosyl transferase csbB (EC 2.-.-.-)|
          Length = 329

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +2

Query: 71  FLKEFDMWVGFDQNPLYALLHESIYCEGSSSKWTADKIFN 190
           F K    W+GFDQ  ++   +E++  +  +SKW+   +FN
Sbjct: 178 FSKGLFCWIGFDQKIVF---YENVERKNGTSKWSFSSLFN 214

>ATPG_MYCPA (Q73X58) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1|
           sector gamma subunit)
          Length = 304

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = +2

Query: 29  PVLVPGAKKSISYYFLKEFDM---WVGFDQNPLY 121
           PVL    +K+++YY  + +D+   W GF + P Y
Sbjct: 114 PVLYSVGRKALNYYTFRNWDISGSWTGFSEQPQY 147

>SLS1_YEAST (P42900) Sigma-like sequence protein 1, mitochondrial precursor|
           (Protein SLS1)
          Length = 643

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = -1

Query: 158 KIPHSR*TRAREHKEDFDQNLPTCQTL---SRSNSLYSFLRQERVQDPT 21
           K P  R ++ R HKE  D NL     L    + NSL S L   R++ PT
Sbjct: 53  KQPRHRPSKKRSHKETGDNNLDFGSKLLVFEKQNSLDSALNSIRLKKPT 101

>MATK_LEMMN (Q8WHM4) Maturase K (Intron maturase)|
          Length = 512

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
 Frame = -1

Query: 203 NFYFH*KSYRLSILMKIPHSR--*TRAREHKEDFDQNLPTCQTLSRSNSLYSFLRQE 39
           NFY+   S   +I+++IP SR   +  +E KE     +P  Q L   +SL+SFL  +
Sbjct: 93  NFYYQMISEAFAIVVEIPFSRRLVSSLKEKKE-----IPKYQNLRSIHSLFSFLEDK 144

>SYM_CLOPE (Q8XHG1) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA|
           ligase) (MetRS)
          Length = 645

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 101 FDQNPLYALLHESIYCEGSSSKWTADKIFNEN 196
           +DQ  +Y   +E +YC    S WT  ++ N N
Sbjct: 113 YDQGDIYKDSYEGLYCTPCESFWTETQLVNGN 144

>CCR6_MOUSE (O54689) C-C chemokine receptor type 6 (C-C CKR-6) (CC-CKR-6)|
           (CCR-6) (KY411) (CD196 antigen)
          Length = 367

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +2

Query: 26  DPVLVPGAKKSISYYFLKEF-DMWVGFDQNPLYALLHESIYCEGSSSKWTADKIFNENRS 202
           +PVL     +    YF+K   D+W    +N +   L   +Y E   S+ T++ + N+N S
Sbjct: 304 NPVLYAFIGQKFRNYFMKIMKDVWCMRRKNKMPGFLCARVYSESYISRQTSETVENDNAS 363

>CTGE2_HUMAN (Q96RT6) Protein cTAGE-2|
          Length = 754

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +2

Query: 74  LKEFDMWVGFDQNPLYALLHESIYCEGSSSKWTADKIFNENR 199
           LKEF+  + F Q  +  +LHE    +  S+ WTA++  N+ R
Sbjct: 408 LKEFEKTIHFYQKKI--ILHEKKARDNWSAAWTAERNLNDLR 447

>ATPG_CORGL (Q79VG6) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1|
           sector gamma subunit)
          Length = 325

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = +2

Query: 50  KKSISYYFLKEFDM---WVGFDQNPLYALLH 133
           KK + YY  +  D+   W GF Q+P +A  H
Sbjct: 120 KKGVDYYKFRAEDVAGTWTGFSQDPDWAATH 150


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,330,323
Number of Sequences: 219361
Number of extensions: 693322
Number of successful extensions: 1692
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1690
length of database: 80,573,946
effective HSP length: 91
effective length of database: 60,612,095
effective search space used: 1454690280
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)