>YHRE_SCHPO (Q9P7Z3) Hypothetical protein C839.14c in chromosome II|
          Length = 238

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 172 SMLGLQSYWDASYSEDLTNFXEHGHAVEIW 261
           S LG + YWD  Y  +++NF E     E+W
Sbjct: 7   SKLGTKQYWDNVYEREVSNFTEFNDEGEVW 36

>EBNA2_EBV (P12978) Epstein-Barr nuclear antigen 2 (EBV nuclear antigen 2)|
           (EBNA-2)
          Length = 487

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +2

Query: 53  TSATPTLLMCSPRLRXPGTSPPLPLITVLIKMTK 154
           T   P  L   PR   P T PP PL+TVL + T+
Sbjct: 204 TPLPPATLTVPPRPTRPTTLPPTPLLTVLQRPTE 237

>EBNA2_EBVG (Q3KSV2) Epstein-Barr nuclear antigen 2 (EBV nuclear antigen 2)|
           (EBNA-2) (EBNA2)
          Length = 451

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +2

Query: 53  TSATPTLLMCSPRLRXPGTSPPLPLITVLIKMTK 154
           T   P  L   PR   P T PP PL+TVL + T+
Sbjct: 170 TPLPPATLTVPPRPTRPTTLPPTPLLTVLQRPTE 203

>DYNA_RAT (P28023) Dynactin-1 (150 kDa dynein-associated polypeptide)|
           (DP-150) (DAP-150) (p150-glued)
          Length = 1280

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
 Frame = +2

Query: 14  GPCG-ASTGARSMTTSATPTL------LMCSPRLRXPGTSPPLP 124
           GP G AS G  S +  +TP        ++ +P L  PG +PPLP
Sbjct: 168 GPSGSASAGELSSSEPSTPAQTPLAAPIIPTPALTSPGAAPPLP 211

>DYNA_MOUSE (O08788) Dynactin-1 (150 kDa dynein-associated polypeptide)|
           (DP-150) (DAP-150) (p150-glued)
          Length = 1281

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
 Frame = +2

Query: 14  GPCG-ASTGARSMTTSATPTL------LMCSPRLRXPGTSPPLP 124
           GP G AS G  S +  +TP        ++ +P L  PG +PPLP
Sbjct: 168 GPSGSASAGELSSSEPSTPAQTPLAAPIIPTPALTSPGAAPPLP 211


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.308    0.128    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,307,797
Number of Sequences: 219361
Number of extensions: 426005
Number of successful extensions: 1056
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 80,573,946
effective HSP length: 62
effective length of database: 66,973,564
effective search space used: 1607365536
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)