>ATPG_CORJK (Q4JUJ9) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1|
           sector gamma subunit)
          Length = 326

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 2   PSPGVLLPSLDPSYEARGPFLSKLLTSSAINGHRRRNPGEPTERAT 139
           P P  LL +L P Y +RG F + L ++++ +  RR      T+ AT
Sbjct: 242 PDPDTLLKALLPQYVSRGIFAAMLESAASESAARRTAMSAATDNAT 287

>SYI_PSEHT (Q3IEA2) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 942

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +2

Query: 29  LDPSYEARGPFLSKLLTSSAINGH 100
           L+ S + RG F+S ++TS AINGH
Sbjct: 566 LEGSDQHRGWFMSSMMTSVAINGH 589

>ATL3B_ARATH (Q8RXX9) RING-H2 finger protein ATL3B precursor (RING-H2 finger|
           protein ATL6)
          Length = 398

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +2

Query: 83  SAINGHRRRNPGEPTERATIRLLEQNHKELLR 178
           S   GH    PGE TER T+RL E   K +++
Sbjct: 238 SHTTGHSVVQPGECTERFTLRLPEDVRKRIMK 269

>SYI_SYNPX (Q7U9G9) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 974

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +2

Query: 29  LDPSYEARGPFLSKLLTSSAINGH 100
           L+ S + RG F S LLTS A+NGH
Sbjct: 584 LEGSDQHRGWFQSSLLTSVAVNGH 607

>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4|
           (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1)
          Length = 779

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +2

Query: 2   PSPGVLLPSLDPSYEARGPFLSKLLTSSAINGHRRRNPG 118
           P PGV LP  DP+ +   P  S  + +S   G  RR  G
Sbjct: 702 PLPGVPLPPSDPTRQETPPPRSPPVANSGSTGFSRRGSG 740

>DNAE2_RHOPA (Q6N8V0) Error-prone DNA polymerase (EC 2.7.7.7)|
          Length = 1195

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +2

Query: 11   GVLLPSLDPSYEARGPFLSKLLTSSAINGHRRRNPGEPTER 133
            G++ P+L    +   P  S+     A+NG RR  P  P +R
Sbjct: 1138 GLVRPALPDGADLYEPLTSEKYNYEALNGDRRDTPDAPAQR 1178

>HUS1_SCHPO (P78955) Checkpoint protein hus1|
          Length = 287

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = +2

Query: 134 ATIRLLEQNHKELLR*ATTWSG 199
           +T+RL ++N++ LL  +TTWSG
Sbjct: 94  STVRLSKKNNQPLLSLSTTWSG 115

>CSPG4_HUMAN (Q6UVK1) Chondroitin sulfate proteoglycan 4 precursor (Chondroitin|
           sulfate proteoglycan NG2) (Melanoma chondroitin sulfate
           proteoglycan) (Melanoma-associated chondroitin sulfate
           proteoglycan)
          Length = 2322

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = +2

Query: 32  DPSYEARGPFLSKLLTSSAINGHRRRNPGEPTERATIRLLE 154
           DP     G     L TSS +   RR  PGEP    + R LE
Sbjct: 582 DPDSACEGLTFQVLGTSSGLPVERRDQPGEPATEFSCRELE 622

>TRPA_BUCAI (P57365) Tryptophan synthase alpha chain (EC 4.2.1.20)|
          Length = 269

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 9/73 (12%)
 Frame = +3

Query: 9   PVFCCPAWILHTRHEDRSSPSFLHHQRLMATGGVTLESLPN---------ELPLDFLNKI 161
           P+F CP           +   FL+   L A G + + S P           LP DF+NKI
Sbjct: 150 PIFICPP---------DADADFLYKISLYAQGFIYVLSRPGVTGIKNNTIALPRDFINKI 200

Query: 162 TRNFSDELLLGQG 200
            +  S  LL G G
Sbjct: 201 KKYNSVPLLQGFG 213


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,424,321
Number of Sequences: 219361
Number of extensions: 511371
Number of successful extensions: 1668
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1668
length of database: 80,573,946
effective HSP length: 42
effective length of database: 71,360,784
effective search space used: 1712658816
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)